Flowering time control protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WD40_Gbeta | PF25391 | 23 - 246 | 1.1e-21 | G protein beta WD-40 repeat protein |
| Beta-prop_EML_2 | PF23414 | 25 - 113 | 1.1e-06 | Echinoderm microtubule-associated protein second beta-propeller |
| WD40_CDC20-Fz | PF24807 | 26 - 195 | 7.4e-22 | CDC20/Fizzy WD40 domain |
| Beta-prop_WDR3_1st | PF25173 | 30 - 158 | 2.7e-18 | WDR3 first beta-propeller domain |
| Beta-prop_WDR3_2nd | PF25172 | 30 - 104 | 9.5e-06 | WDR3 second beta-propeller domain |
| Beta-prop_IFT140_1st | PF23383 | 31 - 117 | 1.4e-09 | IFT140 first beta-propeller |
| Beta-prop_WDR5 | PF25175 | 32 - 105 | 5.1e-08 | WDR5 beta-propeller domain |
| Beta-prop_THOC3 | PF25174 | 34 - 104 | 1.3e-08 | THOC3 beta-propeller domain |
| Beta-prop_EIPR1 | PF23609 | 35 - 186 | 5.1e-07 | EIPR1 beta-propeller |
| WD40_Prp19 | PF24814 | 36 - 251 | 3.8e-32 | Prp19 WD40 domain |
| EIF3I | PF24805 | 68 - 155 | 1.9e-08 | EIF3I |
| WD40_MABP1-WDR62_2nd | PF24782 | 77 - 246 | 1.9e-12 | MABP1/WDR62 second WD40 domain |
| Beta-prop_TEP1_2nd | PF25047 | 80 - 250 | 3e-15 | TEP-1 second beta-propeller |
| Beta-prop_WDR5 | PF25175 | 98 - 230 | 3.6e-30 | WDR5 beta-propeller domain |
| WDR55 | PF24796 | 108 - 235 | 7.1e-16 | WDR55 |
| Beta-prop_WDR36-Utp21_2nd | PF25168 | 111 - 254 | 8e-18 | WDR36/Utp21 second beta-propeller domain |
| WD40 | PF00400 | 114 - 145 | 9e-06 | WD domain, G-beta repeat |
| Beta-prop_CAF1B_HIR1 | PF24105 | 115 - 182 | 1.7e-07 | CAF1B/HIR1 beta-propeller domain |
| Beta-prop_WDR3_2nd | PF25172 | 115 - 187 | 1.6e-09 | WDR3 second beta-propeller domain |
| Beta-prop_THOC3 | PF25174 | 116 - 194 | 1.3e-17 | THOC3 beta-propeller domain |
| WD40_WDHD1_1st | PF24817 | 118 - 194 | 6.2e-11 | WDHD1 first WD40 domain |
| Beta-prop_EML_2 | PF23414 | 128 - 252 | 3.8e-20 | Echinoderm microtubule-associated protein second beta-propeller |
| Beta-prop_WDR90_POC16_2nd | PF23393 | 131 - 218 | 8.6e-08 | WDR90/POC16, second beta-propeller |
| Beta-prop_SCAP | PF24017 | 133 - 230 | 2.9e-07 | SCAP Beta-propeller |
| Beta-prop_WDR3_1st | PF25173 | 149 - 263 | 1.8e-22 | WDR3 first beta-propeller domain |
| WD40 | PF00400 | 150 - 187 | 3.7e-11 | WD domain, G-beta repeat |
| Beta-prop_CAF1B_HIR1 | PF24105 | 153 - 236 | 3e-11 | CAF1B/HIR1 beta-propeller domain |
| Beta-prop_WDR3_2nd | PF25172 | 154 - 262 | 4.4e-11 | WDR3 second beta-propeller domain |
| Beta-prop_EML | PF23409 | 156 - 261 | 1.9e-08 | Echinoderm microtubule-associated protein first beta-propeller |
| EIF3I | PF24805 | 161 - 253 | 6.2e-10 | EIF3I |
| WD40 | PF00400 | 192 - 229 | 4.4e-08 | WD domain, G-beta repeat |
| WD40_CDC20-Fz | PF24807 | 195 - 262 | 8.4e-12 | CDC20/Fizzy WD40 domain |
| Beta-prop_WDR5 | PF25175 | 197 - 263 | 3.7e-11 | WDR5 beta-propeller domain |
| Beta-prop_DCAF4 | PF23761 | 198 - 253 | 5.5e-06 | DDB1- and CUL4-associated factor 4 beta-propeller domain |
| Beta-prop_THOC3 | PF25174 | 200 - 263 | 1.8e-14 | THOC3 beta-propeller domain |
| WD40_WDHD1_1st | PF24817 | 204 - 256 | 5e-06 | WDHD1 first WD40 domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 545 |
| AccB1I | GGYRCC | 2 cut(s) | 444, 501 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 246 |
| AccII | CGCG | 1 cut(s) | 720 |
| AciI | CCGC | 2 cut(s) | 718, 720 |
| AclWI | GGATC | 2 cut(s) | 278, 672 |
| AcoI | YGGCCR | 2 cut(s) | 469, 721 |
| AcyI | GRCGYC | 1 cut(s) | 139 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 246, 355 |
| AgsI | TTSAA | 3 cut(s) | 196, 391, 440 |
| AluBI | AGCT | 4 cut(s) | 372, 524, 679, 749 |
| AluI | AGCT | 4 cut(s) | 372, 524, 679, 749 |
| AlwI | GGATC | 2 cut(s) | 278, 672 |
| AoxI | GGCC | 3 cut(s) | 3, 469, 721 |
| ApeKI | GCWGC | 2 cut(s) | 56, 646 |
| AseI | ATTAAT | 1 cut(s) | 321 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 357 |
| AspLEI | GCGC | 1 cut(s) | 72 |
| AspS9I | GGNCC | 3 cut(s) | 4, 237, 364 |
| AsuHPI | GGTGA | 3 cut(s) | 197, 290, 338 |
| AvaII | GGWCC | 2 cut(s) | 237, 364 |
| BaeGI | GKGCMC | 1 cut(s) | 293 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 405, 438 |
| BanI | GGYRCC | 2 cut(s) | 444, 501 |
| BanII | GRGCYC | 1 cut(s) | 94 |
| BbsI | GAAGAC | 1 cut(s) | 464 |
| BbvI | GCAGC | 2 cut(s) | 43, 633 |
| BccI | CCATC | 3 cut(s) | 15, 278, 732 |
| BclI | TGATCA | 3 cut(s) | 223, 259, 595 |
| BfaI | CTAG | 3 cut(s) | 329, 564, 746 |
| BglII | AGATCT | 1 cut(s) | 710 |
| BisI | GCNGC | 3 cut(s) | 57, 647, 721 |
| BlsI | GCNGC | 3 cut(s) | 58, 648, 722 |
| Bme18I | GGWCC | 2 cut(s) | 237, 364 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 237, 364 |
| BmiI | GGNNCC | 4 cut(s) | 365, 446, 503, 629 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmsI | GCATC | 2 cut(s) | 550, 763 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BpiI | GAAGAC | 1 cut(s) | 464 |
| Bpu10I | CCTNAGC | 1 cut(s) | 368 |
| BpuEI | CTTGAG | 1 cut(s) | 709 |
| BsaHI | GRCGYC | 1 cut(s) | 139 |
| BsaJI | CCNNGG | 4 cut(s) | 240, 472, 660, 718 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 246, 355 |
| Bse118I | RCCGGY | 1 cut(s) | 467 |
| Bse1I | ACTGG | 3 cut(s) | 61, 503, 647 |
| BseDI | CCNNGG | 4 cut(s) | 240, 472, 660, 718 |
| BseGI | GGATG | 2 cut(s) | 565, 754 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 246, 355 |
| BseMII | CTCAG | 1 cut(s) | 359 |
| BseNI | ACTGG | 3 cut(s) | 61, 503, 647 |
| BseSI | GKGCMC | 1 cut(s) | 293 |
| BseXI | GCAGC | 2 cut(s) | 43, 633 |
| Bsh1236I | CGCG | 1 cut(s) | 720 |
| BshFI | GGCC | 3 cut(s) | 5, 471, 723 |
| BshNI | GGYRCC | 2 cut(s) | 444, 501 |
| BsiSI | CCGG | 1 cut(s) | 468 |
| BslFI | GGGAC | 2 cut(s) | 377, 551 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 246, 355 |
| BsmFI | GGGAC | 2 cut(s) | 377, 551 |
| BsmI | GAATGC | 1 cut(s) | 613 |
| BsnI | GGCC | 3 cut(s) | 5, 471, 723 |
| Bsp1286I | GDGCHC | 2 cut(s) | 94, 293 |
| Bsp143I | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| Bsp19I | CCATGG | 2 cut(s) | 240, 472 |
| BspACI | CCGC | 2 cut(s) | 718, 720 |
| BspANI | GGCC | 3 cut(s) | 5, 471, 723 |
| BspCNI | CTCAG | 1 cut(s) | 360 |
| BspFNI | CGCG | 1 cut(s) | 720 |
| BspHI | TCATGA | 1 cut(s) | 220 |
| BspLI | GGNNCC | 4 cut(s) | 365, 446, 503, 629 |
| BspPI | GGATC | 2 cut(s) | 278, 672 |
| BspT107I | GGYRCC | 2 cut(s) | 444, 501 |
| BsrFI | RCCGGY | 1 cut(s) | 467 |
| BsrI | ACTGG | 3 cut(s) | 61, 503, 647 |
| BssAI | RCCGGY | 1 cut(s) | 467 |
| BssECI | CCNNGG | 4 cut(s) | 240, 472, 660, 718 |
| BssMI | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| BssNI | GRCGYC | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 3 cut(s) | 240, 472, 660 |
| Bst4CI | ACNGT | 4 cut(s) | 421, 444, 542, 555 |
| Bst6I | CTCTTC | 1 cut(s) | 302 |
| BstACI | GRCGYC | 1 cut(s) | 139 |
| BstDEI | CTNAG | 2 cut(s) | 368, 707 |
| BstDSI | CCRYGG | 3 cut(s) | 240, 472, 718 |
| BstF5I | GGATG | 2 cut(s) | 565, 754 |
| BstFNI | CGCG | 1 cut(s) | 720 |
| BstHHI | GCGC | 1 cut(s) | 72 |
| BstKTI | GATC | 7 cut(s) | 108, 226, 262, 273, 598, 667, 713 |
| BstMBI | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| BstSLI | GKGCMC | 1 cut(s) | 293 |
| BstUI | CGCG | 1 cut(s) | 720 |
| BstV1I | GCAGC | 2 cut(s) | 43, 633 |
| BstV2I | GAAGAC | 1 cut(s) | 464 |
| BstX2I | RGATCY | 2 cut(s) | 270, 710 |
| BstYI | RGATCY | 2 cut(s) | 270, 710 |
| BsuRI | GGCC | 3 cut(s) | 5, 471, 723 |
| BtgI | CCRYGG | 3 cut(s) | 240, 472, 718 |
| BtsCI | GGATG | 2 cut(s) | 565, 754 |
| BtsIMutI | CAGTG | 2 cut(s) | 547, 787 |
| CciI | TCATGA | 1 cut(s) | 220 |
| CfoI | GCGC | 1 cut(s) | 72 |
| Cfr10I | RCCGGY | 1 cut(s) | 467 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 237, 364 |
| Cfr42I | CCGCGG | 1 cut(s) | 721 |
| CseI | GACGC | 1 cut(s) | 128 |
| CviAII | CATG | 7 cut(s) | 200, 221, 241, 316, 350, 402, 473 |
| DdeI | CTNAG | 2 cut(s) | 368, 707 |
| DpnI | GATC | 7 cut(s) | 107, 225, 261, 272, 597, 666, 712 |
| DpnII | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 545 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 545 |
| EaeI | YGGCCR | 2 cut(s) | 469, 721 |
| Eam1104I | CTCTTC | 1 cut(s) | 302 |
| EarI | CTCTTC | 1 cut(s) | 302 |
| Eco130I | CCWWGG | 3 cut(s) | 240, 472, 660 |
| Eco24I | GRGCYC | 1 cut(s) | 94 |
| Eco47I | GGWCC | 2 cut(s) | 237, 364 |
| EcoO109I | RGGNCCY | 1 cut(s) | 364 |
| EcoT14I | CCWWGG | 3 cut(s) | 240, 472, 660 |
| EcoT38I | GRGCYC | 1 cut(s) | 94 |
| ErhI | CCWWGG | 3 cut(s) | 240, 472, 660 |
| FaeI | CATG | 7 cut(s) | 203, 224, 244, 319, 353, 405, 476 |
| FaqI | GGGAC | 2 cut(s) | 377, 551 |
| FatI | CATG | 7 cut(s) | 199, 220, 240, 315, 349, 401, 472 |
| FbaI | TGATCA | 3 cut(s) | 223, 259, 595 |
| Fnu4HI | GCNGC | 3 cut(s) | 57, 647, 721 |
| FokI | GGATG | 2 cut(s) | 572, 741 |
| FriOI | GRGCYC | 1 cut(s) | 94 |
| Fsp4HI | GCNGC | 3 cut(s) | 57, 647, 721 |
| FspBI | CTAG | 3 cut(s) | 329, 564, 746 |
| GlaI | GCGC | 1 cut(s) | 71 |
| GluI | GCNGC | 3 cut(s) | 57, 647, 721 |
| HaeIII | GGCC | 3 cut(s) | 5, 471, 723 |
| HapII | CCGG | 1 cut(s) | 468 |
| HgaI | GACGC | 1 cut(s) | 128 |
| HhaI | GCGC | 1 cut(s) | 72 |
| Hin1I | GRCGYC | 1 cut(s) | 139 |
| Hin1II | CATG | 7 cut(s) | 203, 224, 244, 319, 353, 405, 476 |
| Hin6I | GCGC | 1 cut(s) | 70 |
| HinP1I | GCGC | 1 cut(s) | 70 |
| HincII | GTYRAC | 1 cut(s) | 496 |
| HindII | GTYRAC | 1 cut(s) | 496 |
| HindIII | AAGCTT | 1 cut(s) | 677 |
| HinfI | GANTC | 4 cut(s) | 188, 211, 338, 353 |
| HpaII | CCGG | 1 cut(s) | 468 |
| HphI | GGTGA | 3 cut(s) | 197, 290, 338 |
| Hpy166II | GTNNAC | 2 cut(s) | 171, 496 |
| Hpy188I | TCNGA | 4 cut(s) | 381, 409, 519, 729 |
| Hpy188III | TCNNGA | 4 cut(s) | 178, 221, 263, 362 |
| Hpy8I | GTNNAC | 2 cut(s) | 171, 496 |
| HpyAV | CCTTC | 2 cut(s) | 138, 694 |
| HpyCH4III | ACNGT | 4 cut(s) | 421, 444, 542, 555 |
| HpyCH4V | TGCA | 2 cut(s) | 78, 613 |
| HpyF3I | CTNAG | 2 cut(s) | 368, 707 |
| Hsp92I | GRCGYC | 1 cut(s) | 139 |
| Hsp92II | CATG | 7 cut(s) | 203, 224, 244, 319, 353, 405, 476 |
| HspAI | GCGC | 1 cut(s) | 70 |
| Ksp22I | TGATCA | 3 cut(s) | 223, 259, 595 |
| KspI | CCGCGG | 1 cut(s) | 721 |
| Kzo9I | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| Lsp1109I | GCAGC | 2 cut(s) | 43, 633 |
| LweI | GCATC | 2 cut(s) | 550, 763 |
| MaeI | CTAG | 3 cut(s) | 329, 564, 746 |
| MaeIII | GTNAC | 4 cut(s) | 311, 484, 638, 736 |
| MalI | GATC | 7 cut(s) | 107, 225, 261, 272, 597, 666, 712 |
| MboI | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| MboII | GAAGA | 5 cut(s) | 24, 93, 319, 469, 779 |
| MflI | RGATCY | 2 cut(s) | 270, 710 |
| MhlI | GDGCHC | 2 cut(s) | 94, 293 |
| MluCI | AATT | 4 cut(s) | 82, 203, 385, 604 |
| MlyI | GAGTC | 1 cut(s) | 197 |
| MmeI | TCCRAC | 2 cut(s) | 359, 458 |
| MnlI | CCTC | 4 cut(s) | 129, 201, 684, 768 |
| MroXI | GAANNNNTTC | 1 cut(s) | 357 |
| MseI | TTAA | 4 cut(s) | 39, 321, 423, 675 |
| MspA1I | CMGCKG | 1 cut(s) | 720 |
| MspI | CCGG | 1 cut(s) | 468 |
| Mva1269I | GAATGC | 1 cut(s) | 613 |
| MvnI | CGCG | 1 cut(s) | 720 |
| NcoI | CCATGG | 2 cut(s) | 240, 472 |
| NdeII | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| NlaIII | CATG | 7 cut(s) | 203, 224, 244, 319, 353, 405, 476 |
| NlaIV | GGNNCC | 4 cut(s) | 365, 446, 503, 629 |
| NmuCI | GTSAC | 2 cut(s) | 484, 736 |
| PagI | TCATGA | 1 cut(s) | 220 |
| PctI | GAATGC | 1 cut(s) | 613 |
| PdmI | GAANNNNTTC | 1 cut(s) | 357 |
| PfeI | GAWTC | 3 cut(s) | 211, 338, 353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 246 |
| PkrI | GCNGC | 3 cut(s) | 58, 648, 722 |
| PleI | GAGTC | 1 cut(s) | 196 |
| PpsI | GAGTC | 1 cut(s) | 196 |
| PpuMI | RGGWCCY | 1 cut(s) | 364 |
| PshBI | ATTAAT | 1 cut(s) | 321 |
| Psp5II | RGGWCCY | 1 cut(s) | 364 |
| PspN4I | GGNNCC | 4 cut(s) | 365, 446, 503, 629 |
| PspPI | GGNCC | 3 cut(s) | 4, 237, 364 |
| PspPPI | RGGWCCY | 1 cut(s) | 364 |
| PsuI | RGATCY | 2 cut(s) | 270, 710 |
| SacII | CCGCGG | 1 cut(s) | 721 |
| SaqAI | TTAA | 4 cut(s) | 39, 321, 423, 675 |
| SatI | GCNGC | 3 cut(s) | 57, 647, 721 |
| Sau3AI | GATC | 7 cut(s) | 105, 223, 259, 270, 595, 664, 710 |
| Sau96I | GGNCC | 3 cut(s) | 4, 237, 364 |
| SchI | GAGTC | 1 cut(s) | 197 |
| SduI | GDGCHC | 2 cut(s) | 94, 293 |
| SetI | ASST | 9 cut(s) | 130, 239, 302, 369, 374, 526, 569, 681, 751 |
| SfaNI | GCATC | 2 cut(s) | 550, 763 |
| Sfr303I | CCGCGG | 1 cut(s) | 721 |
| SgrBI | CCGCGG | 1 cut(s) | 721 |
| SinI | GGWCC | 2 cut(s) | 237, 364 |
| SmlI | CTYRAG | 1 cut(s) | 688 |
| SmoI | CTYRAG | 1 cut(s) | 688 |
| Sse9I | AATT | 4 cut(s) | 82, 203, 385, 604 |
| SsiI | CCGC | 2 cut(s) | 718, 720 |
| SspMI | CTAG | 3 cut(s) | 329, 564, 746 |
| StyI | CCWWGG | 3 cut(s) | 240, 472, 660 |
| TaaI | ACNGT | 4 cut(s) | 421, 444, 542, 555 |
| TaqI | TCGA | 3 cut(s) | 35, 104, 112 |
| TasI | AATT | 4 cut(s) | 82, 203, 385, 604 |
| TauI | GCSGC | 1 cut(s) | 723 |
| TfiI | GAWTC | 3 cut(s) | 211, 338, 353 |
| Tru1I | TTAA | 4 cut(s) | 39, 321, 423, 675 |
| Tru9I | TTAA | 4 cut(s) | 39, 321, 423, 675 |
| TscAI | CASTG | 2 cut(s) | 547, 787 |
| TseFI | GTSAC | 2 cut(s) | 484, 736 |
| TseI | GCWGC | 2 cut(s) | 56, 646 |
| Tsp45I | GTSAC | 2 cut(s) | 484, 736 |
| TspDTI | ATGAA | 5 cut(s) | 216, 351, 366, 390, 713 |
| TspRI | CASTG | 2 cut(s) | 547, 787 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 246 |
| VpaK11BI | GGWCC | 2 cut(s) | 237, 364 |
| VspI | ATTAAT | 1 cut(s) | 321 |
| XmnI | GAANNNNTTC | 1 cut(s) | 357 |
| XspI | CTAG | 3 cut(s) | 329, 564, 746 |