AT2G19910
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0000505
Physical Location & Seq
Reverse (-)
8595605 .. 8600931
5327 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19910.1

Sequence Viewer

Length: 2979 bp
ATGATGAACAATGGCTGCGATGAAGTCTCTCCGCGGTCAGAGATCGCTCTTCTGGGTAGTGTTGAAACAATGTTGGAGAAAATCTACGAGAAACACAATCATCGTCTTCCGATAAGTGTGGAGACAAGGCGAAAACTTTCTTCGATTTCTGAGGAATTGGCTCTGGAAACACTTAGGAAAGTTTTCAATAAGCCGTATTTGAAGACCCTCGATGGGTTAATCATGTATTTTGTTAAAGGGACAGTCACTGTTGATGGCTCTCCACGCCTGAGTCCCGGCGAGTCTCCAGTACAGTCTCCTAGAACTCCTGCCAAAAAAAGTTGCAGGGCTTCTCAAGATGTGTCTCTTGATTTGGAAACTCCCTCTCCTAAGTTCATGAAAAGAGAAGAAAATGGTGGATCTAAGTACATTCCTCCGCTTTTAGCTTTGGGTGAACTTGAATTCAAGAAGGCGTTTCTGTTGCTTAGCTATATTGGAGGGGAATCCCTTGTTGAGGAGGTTATATCTGGTGATCAGATCAGAAAATGGAAGGATTTGCCAATGGTTTCATATGAAGCAGCGGTTTGGAACCGGTTGGGACAGCGTTATTGTTCCCCCAAGGAGCGAAGAAGGCCACTTGAAGGGGATAGTGGGATGACCCATTACTATCAATGTCATGTTGCTACCGATGGTAGTTACAAATTCAAGGGTCATCTTCTGGAGAACACTGGAACACACCTGCACAAGGTTTTGGGTGATGATAACGTTCTAACTGTCAAATTTGATAAAGTGTTAGGCGTGGAAACCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGGTATCATGGTTGGGTTACGCCGTTATCGATTTTTTGTTTTCAAAGATGGAGGGAAAGAAGAGAAGAAGAAAGATGTTTCTACAAAGGGAGTTAAATGCTACTTTATACGCACAGACTCGACAGCTTCAATTGATATGCAAAATCCCTATATCTTCGCCGGAAAGTCAATGCATGAAGCACGTATGCATTTTATGCATGTGAATACTTTGTCATCTTTGCCCAACTATATGTCAAGGTTTTCTTTAATTCTGTCAAAGACTAAAACGCTCGAAGTTGACATGACTGGAATTACCTTTGAGCAAATCGATGATATACACTGCCATGATCAAGATGATAAGGATGTTCTTGACAAGAATGGGAAACCTTGTATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCAGTTAATATTTTTAAAGGGAAATCTATGAGAAGTAACAATATTCAGAGTAAGAATTTAAATTTTGAAGGACAGGGACCATGTGGCCAAGAGCCGCCTCTGCTGATCCAGTTTCGGATTTTTTATAATGGCTATGCTGTTAAGGGAACTTTTCTCACAAACAAGAAACTTCCTCCTCGGACTGTCCAGGTTCGACCTTCTATGATCAAGGTGTATGAAGATCGAACCTTGTCAAATCTTAGTACCTTTAACTCCTTGGAGGTAGTCACTACAAGTAATCCACCAAGAAAGGCGAGGCTATCAAGAAATTTGGTGGCGCTACTTAGTTATGGAGGAGTCCCTAATGACTTCTTTTTGAATATATTGCGCAACACGCTGGAAGAGTCCAAAACCATATTCTACAGTGAACGTGCTGCGTTTAAAGCTGCCATTAATTATGGGGACGACCAGTACACTGCAGATATGATCTTGGTTGGTATCCCTCTTGATGAACCATACTTGAAGGATCGTCTTTCTTATCTCTTAAAGACAGAGAGGAATGCTCTCAAAGCAGGAAGGTTTCCTATTGACGAATCATACTATATCATGGGCACAGTGGATCCCACCGGGGAGCTTAAGGAAAATGAAATCTGTGTCATCCTCCATTCTGGCCAAATTTCCGGGGATGTGTTAGTTTACAGAAATCCTGGATTACATTTTGGAGACATACATGTACTTAAGGCTACCTATGTTAAGGCCTTAGAAGACTATGTTGGAAATGCCAAGTTTGCTGTGTTCTTCCCTCAGAAAGGTCCAAGATCCTTGGGCGATGAGATTGCTGGTGGTGACTTTGATGGCGATATGTATTTCATATCCAGAAATCCCAAGCTACTGGAACACTTCAAGCCAAGTGAACCATGGGTGAGTTCTTCTAAACCTAGTAAAATTTACTGTGGAAGAAAGCCAAGTGAACTATCAGAAGAAGAGTTGGAAGAAGAGCTATTCAAAATGTTCTTAAAAGCAAGATTTTGTAAGAGAGACGTTATAGGGATGGCTGCAGATTGCTGGCTAGGAATAATGGACCCTTTCCTCACCTTAGGAGATGAGAGTGCTAAGGAAAAATATGAAAGGAAGAAGAATATTCTTAAGTTGATTGATATATACTATGATGCTCTTGATGCACCAAAAAAGGGGGCTAAGGTTGATCTCCCGCCCGATCTAGAGATCAAAAATTTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTTCAGGTCCACTTCTATTCTTGGATTAATCTTTGACACTGTGGATTCTCATAATGCAGAGGAACCCCCACCATCTGAAATCAGTAAACTCTGGTATTTTGAAGATGAACCGGTCCCTAAGTCTCACATGGATAAATTTACATCCTGGTACGAGAATTACCGAAGTGAAATGTCCCAAGCGATGATGGAAACTGATAAGGTTAAGAGGAATCAATTAACCAATGAAGTTATCCAGAGGTACAAGCAGGATTTCTATGGCGCTGCAGGGTTTGAAGACAGCAATAAAAGTCTGGAAGAACTCTACCCCCAAGCCTTGGCACTCTACAACGTCGTTTACGATTATGCCATTCAGGAAGGTGTTGCGAAATGTACATTTGCCTGGAATGTTGCAGGACCGGTCCTGTGCAAATTTTACCTTAAGAAAACGAAGGATAAATCAGTAGTGGCTTCAACGTCTGTGCTTAAAAAGCTTTTGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

992

Amino Acids

112.76

Weight (kDa)

7.73

Isoelectric Point (pI)

43.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
4HB_RdRP3_N PF26249 13 - 88 3.8e-36 RdRP3/4/5, N-terminal four helical bundle domain
RdRP_helical PF26252 138 - 207 1.5e-17 RNA dependent RNA polymerase, helical domain
RdRP PF05183 227 - 847 7.4e-110 RNA dependent RNA polymerase
RdRP_head PF26253 864 - 986 3.1e-27 RdRP, head domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1377
AarI CACCTGC 1 cut(s) 726
Acc16I TGCGCA 1 cut(s) 1619
Acc36I ACCTGC 1 cut(s) 726
AccB7I CCANNNNNTGG 1 cut(s) 2812
AccI GTMKAC 1 cut(s) 1201
AccII CGCG 1 cut(s) 34
AciI CCGC 6 cut(s) 32, 34, 416, 560, 1346, 2441
AclI AACGTT 1 cut(s) 744
AclWI GGATC 6 cut(s) 406, 1351, 1764, 1844, 1857, 2043
AcoI YGGCCR 2 cut(s) 1336, 1900
AfaI GTAC 8 cut(s) 291, 407, 1495, 1703, 1965, 2648, 2738, 2869
AfiI CCNNNNNNNGG 7 cut(s) 213, 493, 620, 724, 2039, 2420, 2812
AflII CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
AflIII ACRYGT 1 cut(s) 1960
AgeI ACCGGT 3 cut(s) 570, 2608, 2893
AjnI CCWGG 4 cut(s) 1437, 1936, 2642, 2876
AjuI GAANNNNNNNTTGG 4 cut(s) 1631, 1663, 1986, 2018
AluBI AGCT 8 cut(s) 425, 468, 956, 1676, 1864, 2119, 2230, 2968
AluI AGCT 8 cut(s) 425, 468, 956, 1676, 1864, 2119, 2230, 2968
Alw26I GTCTC 8 cut(s) 31, 116, 288, 300, 348, 1947, 2262, 2625
AlwI GGATC 6 cut(s) 406, 1351, 1764, 1844, 1857, 2043
AlwNI CAGNNNCTG 1 cut(s) 248
AoxI GGCC 4 cut(s) 611, 1336, 1900, 1986
ApeKI GCWGC 6 cut(s) 15, 557, 1664, 1676, 2285, 2759
AseI ATTAAT 2 cut(s) 1683, 2525
AsiGI ACCGGT 3 cut(s) 570, 2608, 2893
Asp700I GAANNNNTTC 2 cut(s) 136, 182
AspLEI GCGC 3 cut(s) 1570, 1620, 2759
AspS9I GGNCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
AsuC2I CCSGG 3 cut(s) 276, 1858, 1912
AsuHPI GGTGA 6 cut(s) 443, 521, 746, 2087, 2164, 2314
AvaII GGWCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
AxyI CCTNAGG 1 cut(s) 2326
BaeGI GKGCMC 1 cut(s) 1844
BalI TGGCCA 2 cut(s) 1338, 1902
BamHI GGATCC 1 cut(s) 1849
BbsI GAAGAC 4 cut(s) 98, 209, 2001, 2778
BbvI GCAGC 6 cut(s) 2, 569, 1651, 1663, 2272, 2746
BccI CCATC 9 cut(s) 206, 248, 662, 872, 1205, 2078, 2275, 2578, 2677
BceAI ACGGC 2 cut(s) 178, 837
BcgI CGANNNNNNTGC 2 cut(s) 2048, 2082
BciT130I CCWGG 4 cut(s) 1439, 1938, 2644, 2878
BciVI GTATCC 1 cut(s) 1739
BclI TGATCA 3 cut(s) 511, 1156, 1455
BcnI CCSGG 3 cut(s) 276, 1858, 1912
BcoDI GTCTC 8 cut(s) 31, 116, 288, 300, 348, 1947, 2262, 2625
BfaI CTAG 4 cut(s) 300, 2169, 2300, 2450
BfmI CTRYAG 4 cut(s) 1651, 1707, 2286, 2760
BfoI RGCGCY 2 cut(s) 1571, 2760
BfrI CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
BfuAI ACCTGC 1 cut(s) 726
BfuI GTATCC 1 cut(s) 1739
BisI GCNGC 7 cut(s) 16, 558, 1346, 1665, 1677, 2286, 2760
BlpI GCTNAGC 1 cut(s) 464
BlsI GCNGC 7 cut(s) 17, 559, 1347, 1666, 1678, 2287, 2761
Bme1390I CCNGG 7 cut(s) 276, 1439, 1858, 1912, 1938, 2644, 2878
Bme18I GGWCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
BmgT120I GGNCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
BmiI GGNNCC 6 cut(s) 569, 1329, 1851, 2313, 2562, 2613
BmrFI CCNGG 7 cut(s) 276, 1439, 1858, 1912, 1938, 2644, 2878
BmsI GCATC 2 cut(s) 2389, 2398
BpiI GAAGAC 4 cut(s) 98, 209, 2001, 2778
BplI GAGNNNNNCTC 2 cut(s) 1777, 1809
BpmI CTGGAG 2 cut(s) 270, 719
Bpu10I CCTNAGC 2 cut(s) 2343, 2427
Bpu1102I GCTNAGC 1 cut(s) 464
BpuEI CTTGAG 1 cut(s) 318
BpuMI CCSGG 3 cut(s) 276, 1858, 1912
Bsa29I ATCGAT 2 cut(s) 859, 1137
BsaAI YACGTR 1 cut(s) 1013
BsaJI CCNNGG 9 cut(s) 32, 597, 1427, 1506, 1857, 1911, 2052, 2147, 2811
BsaWI WCCGGW 3 cut(s) 570, 2608, 2893
BsaXI ACNNNNNCTCC 2 cut(s) 349, 379
Bsc4I CCNNNNNNNGG 7 cut(s) 213, 493, 620, 724, 2039, 2420, 2812
Bse118I RCCGGY 3 cut(s) 570, 2608, 2893
Bse1I ACTGG 8 cut(s) 287, 712, 1120, 1222, 1253, 1360, 1699, 2127
Bse21I CCTNAGG 1 cut(s) 2326
BseBI CCWGG 4 cut(s) 1439, 1938, 2644, 2878
BseCI ATCGAT 2 cut(s) 859, 1137
BseDI CCNNGG 9 cut(s) 32, 597, 1427, 1506, 1857, 1911, 2052, 2147, 2811
BseGI GGATG 7 cut(s) 639, 1177, 1251, 1887, 1921, 2286, 2639
BseLI CCNNNNNNNGG 7 cut(s) 213, 493, 620, 724, 2039, 2420, 2812
BseMII CTCAG 4 cut(s) 141, 260, 1221, 2048
BseNI ACTGG 8 cut(s) 287, 712, 1120, 1222, 1253, 1360, 1699, 2127
BseRI GAGGAG 3 cut(s) 509, 1416, 1599
BseSI GKGCMC 1 cut(s) 1844
BseXI GCAGC 6 cut(s) 2, 569, 1651, 1663, 2272, 2746
BsgI GTGCAG 1 cut(s) 704
Bsh1236I CGCG 1 cut(s) 34
BshFI GGCC 4 cut(s) 613, 1338, 1902, 1988
BshTI ACCGGT 3 cut(s) 570, 2608, 2893
BshVI ATCGAT 2 cut(s) 859, 1137
BsiSI CCGG 7 cut(s) 276, 571, 990, 1857, 1911, 2609, 2894
BslFI GGGAC 8 cut(s) 253, 258, 591, 1341, 1574, 1706, 2597, 2656
BslI CCNNNNNNNGG 7 cut(s) 213, 493, 620, 724, 2039, 2420, 2812
BsmAI GTCTC 8 cut(s) 31, 116, 288, 300, 348, 1947, 2262, 2625
BsmBI CGTCTC 1 cut(s) 2262
BsmFI GGGAC 8 cut(s) 253, 258, 591, 1341, 1574, 1706, 2597, 2656
BsmI GAATGC 1 cut(s) 1795
BsnI GGCC 4 cut(s) 613, 1338, 1902, 1988
Bsp1286I GDGCHC 1 cut(s) 1844
Bsp1407I TGTACA 1 cut(s) 2867
Bsp1720I GCTNAGC 1 cut(s) 464
Bsp19I CCATGG 1 cut(s) 2147
BspACI CCGC 6 cut(s) 32, 34, 416, 560, 1346, 2441
BspANI GGCC 4 cut(s) 613, 1338, 1902, 1988
BspCNI CTCAG 4 cut(s) 142, 261, 1222, 2047
BspDI ATCGAT 2 cut(s) 859, 1137
BspFNI CGCG 1 cut(s) 34
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 6 cut(s) 569, 1329, 1851, 2313, 2562, 2613
BspMAI CTGCAG 3 cut(s) 1711, 2290, 2764
BspMI ACCTGC 1 cut(s) 726
BspPI GGATC 6 cut(s) 406, 1351, 1764, 1844, 1857, 2043
BspQI GCTCTTC 2 cut(s) 54, 2220
BspTI CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
BsrFI RCCGGY 3 cut(s) 570, 2608, 2893
BsrGI TGTACA 1 cut(s) 2867
BsrI ACTGG 8 cut(s) 287, 712, 1120, 1222, 1253, 1360, 1699, 2127
BssAI RCCGGY 3 cut(s) 570, 2608, 2893
BssECI CCNNGG 9 cut(s) 32, 597, 1427, 1506, 1857, 1911, 2052, 2147, 2811
BssNAI GTATAC 1 cut(s) 1202
BssT1I CCWWGG 5 cut(s) 597, 1506, 2052, 2147, 2811
Bst1107I GTATAC 1 cut(s) 1202
Bst2UI CCWGG 4 cut(s) 1439, 1938, 2644, 2878
Bst4CI ACNGT 9 cut(s) 244, 250, 294, 754, 1435, 1655, 1846, 2183, 2539
Bst6I CTCTTC 5 cut(s) 54, 885, 1626, 2208, 2220
BstAFI CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
BstAPI GCANNNNNTGC 1 cut(s) 1024
BstAUI TGTACA 1 cut(s) 2867
BstBAI YACGTR 1 cut(s) 1013
BstC8I GCNNGC 1 cut(s) 2297
BstDSI CCRYGG 2 cut(s) 32, 2147
BstENI CCTNNNNNAGG 3 cut(s) 491, 722, 2037
BstF5I GGATG 7 cut(s) 639, 1177, 1251, 1887, 1921, 2286, 2639
BstFNI CGCG 1 cut(s) 34
BstH2I RGCGCY 2 cut(s) 1571, 2760
BstHHI GCGC 3 cut(s) 1570, 1620, 2759
BstMAI GTCTC 8 cut(s) 31, 116, 288, 300, 348, 1947, 2262, 2625
BstNI CCWGG 4 cut(s) 1439, 1938, 2644, 2878
BstNSI RCATGY 2 cut(s) 1031, 1964
BstSCI CCNGG 7 cut(s) 274, 1437, 1856, 1910, 1936, 2642, 2876
BstSFI CTRYAG 4 cut(s) 1651, 1707, 2286, 2760
BstSLI GKGCMC 1 cut(s) 1844
BstUI CGCG 1 cut(s) 34
BstV1I GCAGC 6 cut(s) 2, 569, 1651, 1663, 2272, 2746
BstV2I GAAGAC 4 cut(s) 98, 209, 2001, 2778
BstX2I RGATCY 3 cut(s) 398, 1849, 2048
BstXI CCANNNNNNTGG 1 cut(s) 2122
BstYI RGATCY 3 cut(s) 398, 1849, 2048
BstZ17I GTATAC 1 cut(s) 1202
Bsu15I ATCGAT 2 cut(s) 859, 1137
Bsu36I CCTNAGG 1 cut(s) 2326
BsuI GTATCC 1 cut(s) 1739
BsuRI GGCC 4 cut(s) 613, 1338, 1902, 1988
BsuTUI ATCGAT 2 cut(s) 859, 1137
BtgI CCRYGG 2 cut(s) 32, 2147
BtgZI GCGATG 3 cut(s) 33, 2073, 2693
BtsCI GGATG 7 cut(s) 639, 1177, 1251, 1887, 1921, 2286, 2639
BtsI GCAGTG 2 cut(s) 1147, 1704
BtsIMutI CAGTG 7 cut(s) 246, 705, 1147, 1660, 1704, 1851, 2535
BveI ACCTGC 1 cut(s) 726
Cac8I GCNNGC 1 cut(s) 2297
CaiI CAGNNNCTG 1 cut(s) 248
CciI TCATGA 1 cut(s) 375
CfoI GCGC 3 cut(s) 1570, 1620, 2759
Cfr10I RCCGGY 3 cut(s) 570, 2608, 2893
Cfr13I GGNCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
Cfr42I CCGCGG 1 cut(s) 35
ClaI ATCGAT 2 cut(s) 859, 1137
Csp6I GTAC 8 cut(s) 290, 406, 1494, 1702, 1964, 2647, 2737, 2868
CspAI ACCGGT 3 cut(s) 570, 2608, 2893
CviQI GTAC 8 cut(s) 290, 406, 1494, 1702, 1964, 2647, 2737, 2868
DraI TTTAAA 3 cut(s) 1267, 1311, 1672
EaeI YGGCCR 2 cut(s) 1336, 1900
Eam1104I CTCTTC 5 cut(s) 54, 885, 1626, 2208, 2220
EarI CTCTTC 5 cut(s) 54, 885, 1626, 2208, 2220
Eco130I CCWWGG 5 cut(s) 597, 1506, 2052, 2147, 2811
Eco147I AGGCCT 1 cut(s) 1988
Eco47I GGWCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
Eco81I CCTNAGG 1 cut(s) 2326
EcoNI CCTNNNNNAGG 3 cut(s) 491, 722, 2037
EcoO109I RGGNCCY 1 cut(s) 1234
EcoRI GAATTC 1 cut(s) 440
EcoRII CCWGG 4 cut(s) 1437, 1936, 2642, 2876
EcoT14I CCWWGG 5 cut(s) 597, 1506, 2052, 2147, 2811
EcoT22I ATGCAT 3 cut(s) 1005, 1020, 1029
ErhI CCWWGG 5 cut(s) 597, 1506, 2052, 2147, 2811
Esp3I CGTCTC 1 cut(s) 2262
FalI AAGNNNNNCTT 2 cut(s) 1057, 1089
FaqI GGGAC 8 cut(s) 253, 258, 591, 1341, 1574, 1706, 2597, 2656
FauI CCCGC 1 cut(s) 2448
FauNDI CATATG 1 cut(s) 550
FbaI TGATCA 3 cut(s) 511, 1156, 1455
FblI GTMKAC 1 cut(s) 1201
Fnu4HI GCNGC 7 cut(s) 16, 558, 1346, 1665, 1677, 2286, 2760
FokI GGATG 7 cut(s) 646, 1184, 1258, 1874, 1928, 2293, 2626
Fsp4HI GCNGC 7 cut(s) 16, 558, 1346, 1665, 1677, 2286, 2760
FspBI CTAG 4 cut(s) 300, 2169, 2300, 2450
FspI TGCGCA 1 cut(s) 1619
GlaI GCGC 3 cut(s) 1569, 1619, 2758
GluI GCNGC 7 cut(s) 16, 558, 1346, 1665, 1677, 2286, 2760
GsuI CTGGAG 2 cut(s) 270, 719
HaeII RGCGCY 2 cut(s) 1571, 2760
HaeIII GGCC 4 cut(s) 613, 1338, 1902, 1988
HapII CCGG 7 cut(s) 276, 571, 990, 1857, 1911, 2609, 2894
HhaI GCGC 3 cut(s) 1570, 1620, 2759
Hin6I GCGC 3 cut(s) 1568, 1618, 2757
HinP1I GCGC 3 cut(s) 1568, 1618, 2757
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HindIII AAGCTT 1 cut(s) 2966
HinfI GANTC 9 cut(s) 271, 281, 482, 947, 1587, 1634, 1823, 2543, 2707
HpaII CCGG 7 cut(s) 276, 571, 990, 1857, 1911, 2609, 2894
HphI GGTGA 6 cut(s) 443, 521, 746, 2087, 2164, 2314
Hpy99I CGWCG 1 cut(s) 2831
HpyCH4III ACNGT 9 cut(s) 244, 250, 294, 754, 1435, 1655, 1846, 2183, 2539
HpyCH4IV ACGT 6 cut(s) 744, 1012, 1660, 2271, 2826, 2951
HpySE526I ACGT 6 cut(s) 744, 1012, 1660, 2271, 2826, 2951
HspAI GCGC 3 cut(s) 1568, 1618, 2757
Ksp22I TGATCA 3 cut(s) 511, 1156, 1455
KspI CCGCGG 1 cut(s) 35
LguI GCTCTTC 2 cut(s) 54, 2220
LmnI GCTCC 3 cut(s) 601, 1861, 2479
Lsp1109I GCAGC 6 cut(s) 2, 569, 1651, 1663, 2272, 2746
LweI GCATC 2 cut(s) 2389, 2398
MaeI CTAG 4 cut(s) 300, 2169, 2300, 2450
MaeII ACGT 6 cut(s) 744, 1012, 1660, 2271, 2826, 2951
MaeIII GTNAC 7 cut(s) 244, 674, 846, 1286, 1516, 2075, 2483
MfeI CAATTG 1 cut(s) 960
MflI RGATCY 3 cut(s) 398, 1849, 2048
MhlI GDGCHC 1 cut(s) 1844
MlsI TGGCCA 2 cut(s) 1338, 1902
MluNI TGGCCA 2 cut(s) 1338, 1902
MlyI GAGTC 5 cut(s) 280, 290, 941, 1596, 1643
MmeI TCCRAC 3 cut(s) 54, 1984, 2199
Mox20I TGGCCA 2 cut(s) 1338, 1902
Mph1103I ATGCAT 3 cut(s) 1005, 1020, 1029
MroXI GAANNNNTTC 2 cut(s) 136, 182
MscI TGGCCA 2 cut(s) 1338, 1902
MslI CAYNNNNRTG 2 cut(s) 1152, 1209
Msp20I TGGCCA 2 cut(s) 1338, 1902
MspA1I CMGCKG 2 cut(s) 34, 560
MspCI CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
MspI CCGG 7 cut(s) 276, 571, 990, 1857, 1911, 2609, 2894
MspR9I CCNGG 7 cut(s) 276, 1439, 1858, 1912, 1938, 2644, 2878
MunI CAATTG 1 cut(s) 960
Mva1269I GAATGC 1 cut(s) 1795
MvaI CCWGG 4 cut(s) 1439, 1938, 2644, 2878
MvnI CGCG 1 cut(s) 34
NciI CCSGG 3 cut(s) 276, 1858, 1912
NcoI CCATGG 1 cut(s) 2147
NdeI CATATG 1 cut(s) 550
NlaIV GGNNCC 6 cut(s) 569, 1329, 1851, 2313, 2562, 2613
NmuCI GTSAC 4 cut(s) 244, 1516, 2075, 2483
NsbI TGCGCA 1 cut(s) 1619
NsiI ATGCAT 3 cut(s) 1005, 1020, 1029
NspI RCATGY 2 cut(s) 1031, 1964
PagI TCATGA 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 726
PceI AGGCCT 1 cut(s) 1988
PciI ACATGT 1 cut(s) 1960
PciSI GCTCTTC 2 cut(s) 54, 2220
PcsI WCGNNNNNNNCGW 2 cut(s) 856, 2832
PctI GAATGC 1 cut(s) 1795
PdmI GAANNNNTTC 2 cut(s) 136, 182
PfeI GAWTC 4 cut(s) 482, 1823, 2543, 2707
PflMI CCANNNNNTGG 1 cut(s) 2812
PfoI TCCNGGA 1 cut(s) 1936
PinAI ACCGGT 3 cut(s) 570, 2608, 2893
PkrI GCNGC 7 cut(s) 17, 559, 1347, 1666, 1678, 2287, 2761
PleI GAGTC 5 cut(s) 279, 289, 941, 1595, 1642
PpsI GAGTC 5 cut(s) 279, 289, 941, 1595, 1642
Ppu21I YACGTR 1 cut(s) 1013
PpuMI RGGWCCY 1 cut(s) 1234
PscI ACATGT 1 cut(s) 1960
PshBI ATTAAT 2 cut(s) 1683, 2525
PsiI TTATAA 1 cut(s) 1377
Psp1406I AACGTT 1 cut(s) 744
Psp5II RGGWCCY 1 cut(s) 1234
Psp6I CCWGG 4 cut(s) 1437, 1936, 2642, 2876
PspGI CCWGG 4 cut(s) 1437, 1936, 2642, 2876
PspN4I GGNNCC 6 cut(s) 569, 1329, 1851, 2313, 2562, 2613
PspPI GGNCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
PspPPI RGGWCCY 1 cut(s) 1234
PstI CTGCAG 3 cut(s) 1711, 2290, 2764
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 3 cut(s) 398, 1849, 2048
RsaI GTAC 8 cut(s) 291, 407, 1495, 1703, 1965, 2648, 2738, 2869
RsaNI GTAC 8 cut(s) 290, 406, 1494, 1702, 1964, 2647, 2737, 2868
RseI CAYNNNNRTG 2 cut(s) 1152, 1209
SacII CCGCGG 1 cut(s) 35
SapI GCTCTTC 2 cut(s) 54, 2220
SatI GCNGC 7 cut(s) 16, 558, 1346, 1665, 1677, 2286, 2760
Sau96I GGNCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
SchI GAGTC 5 cut(s) 280, 290, 941, 1596, 1643
ScrFI CCNGG 7 cut(s) 276, 1439, 1858, 1912, 1938, 2644, 2878
SduI GDGCHC 1 cut(s) 1844
SfaNI GCATC 2 cut(s) 2389, 2398
SfcI CTRYAG 4 cut(s) 1651, 1707, 2286, 2760
Sfr303I CCGCGG 1 cut(s) 35
SgrBI CCGCGG 1 cut(s) 35
SinI GGWCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
SmiI ATTTAAAT 1 cut(s) 1311
SmiMI CAYNNNNRTG 2 cut(s) 1152, 1209
SmlI CTYRAG 5 cut(s) 333, 1865, 1967, 2375, 2915
SmoI CTYRAG 5 cut(s) 333, 1865, 1967, 2375, 2915
SseBI AGGCCT 1 cut(s) 1988
SsiI CCGC 6 cut(s) 32, 34, 416, 560, 1346, 2441
SspI AATATT 3 cut(s) 1261, 1294, 2371
SspMI CTAG 4 cut(s) 300, 2169, 2300, 2450
StuI AGGCCT 1 cut(s) 1988
StyD4I CCNGG 7 cut(s) 274, 1437, 1856, 1910, 1936, 2642, 2876
StyI CCWWGG 5 cut(s) 597, 1506, 2052, 2147, 2811
SwaI ATTTAAAT 1 cut(s) 1311
TaaI ACNGT 9 cut(s) 244, 250, 294, 754, 1435, 1655, 1846, 2183, 2539
TaiI ACGT 6 cut(s) 747, 1015, 1663, 2274, 2829, 2954
TaqI TCGA 8 cut(s) 143, 210, 859, 950, 1101, 1137, 1444, 1474
TatI WGTACW 5 cut(s) 289, 405, 1701, 1963, 2867
TauI GCSGC 1 cut(s) 1348
TfiI GAWTC 4 cut(s) 482, 1823, 2543, 2707
TscAI CASTG 7 cut(s) 253, 712, 1154, 1660, 1711, 1851, 2542
TseFI GTSAC 4 cut(s) 244, 1516, 2075, 2483
TseI GCWGC 6 cut(s) 15, 557, 1664, 1676, 2285, 2759
Tsp45I GTSAC 4 cut(s) 244, 1516, 2075, 2483
TspRI CASTG 7 cut(s) 253, 712, 1154, 1660, 1711, 1851, 2542
Van91I CCANNNNNTGG 1 cut(s) 2812
Vha464I CTTAAG 4 cut(s) 1865, 1967, 2375, 2915
VpaK11BI GGWCC 8 cut(s) 1234, 1328, 2042, 2311, 2505, 2611, 2891, 2896
VspI ATTAAT 2 cut(s) 1683, 2525
XagI CCTNNNNNAGG 3 cut(s) 491, 722, 2037
XbaI TCTAGA 1 cut(s) 2449
XceI RCATGY 2 cut(s) 1031, 1964
XcmI CCANNNNNNNNNTGG 1 cut(s) 2145
XmiI GTMKAC 1 cut(s) 1201
XmnI GAANNNNTTC 2 cut(s) 136, 182
XspI CTAG 4 cut(s) 300, 2169, 2300, 2450
Zsp2I ATGCAT 3 cut(s) 1005, 1020, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.