Rmu_sc0000897.1_g000005
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000897.1
OG0000505
Physical Location & Seq
Reverse (-)
19732 .. 25646
5915 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000897.1_g000005.1.cds

Sequence Viewer

Length: 1713 bp
atgtccggcgtgcagctacttgactcggtgcagcaatcgctggatcgaatatgcgaccttaaaaaccaaccacagccgaacgacggcatcagaagaaagcttgcattgctgaccgagcaagacgccctctacgtgctaagccaaatttacaacagcaaaactcccatcagaaccctcaatggattcatctctttcatgatcaaggaactagaaaatgaatcttcttcgtcttcttcaagaacagtttggacccctcagagtccctctgcttcttcttcttcttcttcatttactagtcctccacggcctgatcattttcaaggtgagacaatccagtgtggttctcctgttaatcgacagccactttattcttcagcttctccttctcaagcttccccgacttcttcttatcagagccattcctctcctactattactgatgcatcattttattccagttctcagcctcaggatgagactcccaacccatccccggggacagtgtgcaatggacaatcaccctattccttcccttctctctatcaaatcctatctgctccttttaatactcttagacaactctatgagtggttccgagaagctctgggagaactcgatttcagaaagcaatttctgattttgagttatgctggaggaacgaagttaaaagatgtaatagaagcggaggctatcaggagctggaaaagtttgccaatggtaaagttcgagaccacagtttggcatgctttgggtgaaaacaatgttggcaaggctgaccgaccaatgtattctgattgggattctcaaagaacacaccagtactattgttatgtttcggtggatgggagttacaggttcaagggtcccttcctagagaaaccaagaactctcctgcagaaacagttaggagatgacaatgttttggaggtgaaatttaccccaggggaaggttccagtggtacatatagcaagttaatgcgagaaggcattcttgttggtttgcggcgatacgctttctttgtgttccgtgctggtaacaaaggaaagaatatgtggaaagacccaacttcatcacctgtgaaatgttacttcgttcgtgggagctctgatgcagtgatagacaggggtataggctataagttatctggcaaaacgatgcatgaaggaagatctcttttcacgcatgcacacactcggcctagtctggccagctacatggataggttatctctcattttatccaagacagttactttagaagtaaattggtcacatgtgaaggtggaattcatcaaagacatagactgtcgcgatgagtctggtaatcccatctatgtagatggaaaacctcgcatgcatactgatggcacaggatttatatctgaggatctggctttactttgtcctgagatagcacgcaaaggagagcagatcaatattgaacacatcgagggacttgatgatcctgatgatgaacttgaggacaaaattctggaatggaaacagccaggcactagaactcgggaactgcctttgctcatgcagttccgacttttttacgaaggccgtgctatcaaaggaacttttcttgtcaataaagagcttccaccaaaaactttgaagattcgaccatcaatggttaaagttgagccagatccaaaattgtcagatcctcaaacagtaaattcactggagatagtacgaacaaggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

570

Amino Acids

64.23

Weight (kDa)

7.59

Isoelectric Point (pI)

50.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 738
AccII CGCG 1 cut(s) 1311
AciI CCGC 2 cut(s) 683, 1003
AclWI GGATC 5 cut(s) 51, 1395, 1457, 1649, 1664
AcoI YGGCCR 1 cut(s) 1206
AcsI RAATTY 5 cut(s) 144, 932, 1286, 1488, 1684
AcuI CTGAAG 1 cut(s) 357
AcyI GRCGYC 1 cut(s) 123
AfaI GTAC 3 cut(s) 821, 961, 1701
AfiI CCNNNNNNNGG 5 cut(s) 83, 493, 494, 738, 947
AflIII ACRYGT 1 cut(s) 1273
AgsI TTSAA 5 cut(s) 237, 320, 859, 1442, 1621
AhlI ACTAGT 1 cut(s) 293
AjnI CCWGG 2 cut(s) 940, 1507
AjuI GAANNNNNNNTTGG 2 cut(s) 747, 779
AluBI AGCT 9 cut(s) 16, 100, 377, 392, 602, 699, 1104, 1212, 1603
AluI AGCT 9 cut(s) 16, 100, 377, 392, 602, 699, 1104, 1212, 1603
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 3 cut(s) 320, 470, 722
AlwI GGATC 5 cut(s) 51, 1395, 1457, 1649, 1664
AlwNI CAGNNNCTG 1 cut(s) 699
Ama87I CYCGRG 2 cut(s) 493, 1521
AoxI GGCC 4 cut(s) 305, 1196, 1206, 1564
ApeKI GCWGC 2 cut(s) 13, 31
ApoI RAATTY 5 cut(s) 144, 932, 1286, 1488, 1684
Asp700I GAANNNNTTC 1 cut(s) 987
AspS9I GGNCC 2 cut(s) 249, 863
AsuC2I CCSGG 2 cut(s) 494, 495
AsuHPI GGTGA 5 cut(s) 335, 510, 764, 940, 1065
AvaI CYCGRG 2 cut(s) 493, 1521
AvaII GGWCC 2 cut(s) 249, 863
AxyI CCTNAGG 1 cut(s) 468
BalI TGGCCA 1 cut(s) 1208
BanII GRGCYC 1 cut(s) 1106
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 1106
BbvI GCAGC 2 cut(s) 25, 43
BccI CCATC 7 cut(s) 173, 496, 836, 1334, 1337, 1358, 1639
BceAI ACGGC 3 cut(s) 100, 320, 1551
BcgI CGANNNNNNTGC 2 cut(s) 1550, 1584
BciT130I CCWGG 2 cut(s) 942, 1509
BclI TGATCA 2 cut(s) 198, 310
BcnI CCSGG 2 cut(s) 494, 495
BcoDI GTCTC 3 cut(s) 320, 470, 722
BcuI ACTAGT 1 cut(s) 293
BfaI CTAG 5 cut(s) 209, 294, 872, 1200, 1515
BfmI CTRYAG 1 cut(s) 893
BglII AGATCT 1 cut(s) 1169
BisI GCNGC 3 cut(s) 14, 32, 1004
BlpI GCTNAGC 1 cut(s) 137
BlsI GCNGC 3 cut(s) 15, 33, 1005
BmcAI AGTACT 1 cut(s) 821
Bme1390I CCNGG 4 cut(s) 494, 495, 942, 1509
Bme18I GGWCC 2 cut(s) 249, 863
BmeT110I CYCGRG 2 cut(s) 493, 1521
BmgT120I GGNCC 2 cut(s) 249, 863
BmiI GGNNCC 5 cut(s) 251, 593, 864, 865, 952
BmrFI CCNGG 4 cut(s) 494, 495, 942, 1509
BmsI GCATC 5 cut(s) 96, 430, 452, 1099, 1146
BpiI GAAGAC 1 cut(s) 222
BpmI CTGGAG 2 cut(s) 672, 1712
Bpu1102I GCTNAGC 1 cut(s) 137
BpuEI CTTGAG 2 cut(s) 372, 1499
BpuMI CCSGG 2 cut(s) 494, 495
BsaAI YACGTR 1 cut(s) 133
BsaBI GATNNNNATC 1 cut(s) 1378
BsaHI GRCGYC 1 cut(s) 123
BsaI GGTCTC 1 cut(s) 722
BsaJI CCNNGG 6 cut(s) 302, 492, 493, 494, 940, 941
BsaXI ACNNNNNCTCC 2 cut(s) 283, 313
Bsc4I CCNNNNNNNGG 5 cut(s) 83, 493, 494, 738, 947
Bse1I ACTGG 5 cut(s) 334, 456, 817, 954, 1695
Bse21I CCTNAGG 1 cut(s) 468
Bse3DI GCAATG 2 cut(s) 104, 514
Bse8I GATNNNNATC 1 cut(s) 1378
BseBI CCWGG 2 cut(s) 942, 1509
BseDI CCNNGG 6 cut(s) 302, 492, 493, 494, 940, 941
BseGI GGATG 3 cut(s) 478, 488, 847
BseJI GATNNNNATC 1 cut(s) 1378
BseLI CCNNNNNNNGG 5 cut(s) 83, 493, 494, 738, 947
BseMI GCAATG 2 cut(s) 104, 514
BseMII CTCAG 5 cut(s) 269, 476, 482, 1374, 1398
BseNI ACTGG 5 cut(s) 334, 456, 817, 954, 1695
BseXI GCAGC 2 cut(s) 25, 43
BsgI GTGCAG 2 cut(s) 32, 50
Bsh1236I CGCG 1 cut(s) 1311
BshFI GGCC 4 cut(s) 307, 1198, 1208, 1566
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 2 cut(s) 493, 1521
BsiSI CCGG 2 cut(s) 6, 494
BslFI GGGAC 4 cut(s) 246, 511, 849, 1467
BslI CCNNNNNNNGG 5 cut(s) 83, 493, 494, 738, 947
BsmAI GTCTC 3 cut(s) 320, 470, 722
BsmFI GGGAC 4 cut(s) 246, 511, 849, 1467
BsmI GAATGC 1 cut(s) 987
BsnI GGCC 4 cut(s) 307, 1198, 1208, 1566
Bso31I GGTCTC 1 cut(s) 722
BsoBI CYCGRG 2 cut(s) 493, 1521
Bsp1286I GDGCHC 1 cut(s) 1106
Bsp143I GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
Bsp1720I GCTNAGC 1 cut(s) 137
Bsp68I TCGCGA 1 cut(s) 1311
BspACI CCGC 2 cut(s) 683, 1003
BspANI GGCC 4 cut(s) 307, 1198, 1208, 1566
BspCNI CTCAG 5 cut(s) 268, 475, 481, 1375, 1399
BspFNI CGCG 1 cut(s) 1311
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 5 cut(s) 251, 593, 864, 865, 952
BspMAI CTGCAG 1 cut(s) 897
BspPI GGATC 5 cut(s) 51, 1395, 1457, 1649, 1664
BspTNI GGTCTC 1 cut(s) 722
BsrDI GCAATG 2 cut(s) 104, 514
BsrI ACTGG 5 cut(s) 334, 456, 817, 954, 1695
BssECI CCNNGG 6 cut(s) 302, 492, 493, 494, 940, 941
BssMI GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
BssNI GRCGYC 1 cut(s) 123
Bst2UI CCWGG 2 cut(s) 942, 1509
Bst4CI ACNGT 7 cut(s) 244, 502, 736, 903, 1249, 1307, 1681
BstACI GRCGYC 1 cut(s) 123
BstBAI YACGTR 1 cut(s) 133
BstC8I GCNNGC 7 cut(s) 11, 102, 744, 1185, 1210, 1355, 1417
BstDEI CTNAG 7 cut(s) 137, 255, 462, 468, 572, 1383, 1407
BstDSI CCRYGG 1 cut(s) 302
BstF5I GGATG 3 cut(s) 478, 488, 847
BstFNI CGCG 1 cut(s) 1311
BstKTI GATC 9 cut(s) 46, 201, 313, 1172, 1390, 1434, 1465, 1657, 1672
BstMAI GTCTC 3 cut(s) 320, 470, 722
BstMBI GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
BstMWI GCNNNNNNNGC 3 cut(s) 37, 106, 115
BstNI CCWGG 2 cut(s) 942, 1509
BstNSI RCATGY 4 cut(s) 746, 1187, 1277, 1357
BstSCI CCNGG 4 cut(s) 492, 493, 940, 1507
BstSFI CTRYAG 1 cut(s) 893
BstUI CGCG 1 cut(s) 1311
BstV1I GCAGC 2 cut(s) 25, 43
BstV2I GAAGAC 1 cut(s) 222
BstX2I RGATCY 4 cut(s) 1169, 1387, 1654, 1669
BstXI CCANNNNNNTGG 1 cut(s) 1216
BstYI RGATCY 4 cut(s) 1169, 1387, 1654, 1669
Bsu36I CCTNAGG 1 cut(s) 468
BsuRI GGCC 4 cut(s) 307, 1198, 1208, 1566
BtgI CCRYGG 1 cut(s) 302
BtgZI GCGATG 1 cut(s) 1326
BtsCI GGATG 3 cut(s) 478, 488, 847
BtsI GCAGTG 1 cut(s) 1119
BtsIMutI CAGTG 5 cut(s) 341, 507, 961, 1119, 1688
BtuMI TCGCGA 1 cut(s) 1311
Cac8I GCNNGC 7 cut(s) 11, 102, 744, 1185, 1210, 1355, 1417
CaiI CAGNNNCTG 1 cut(s) 699
CciI TCATGA 1 cut(s) 195
Cfr13I GGNCC 2 cut(s) 249, 863
Cfr9I CCCGGG 1 cut(s) 493
CseI GACGC 1 cut(s) 131
Csp6I GTAC 3 cut(s) 820, 960, 1700
CviAII CATG 8 cut(s) 196, 743, 1160, 1184, 1216, 1274, 1354, 1540
CviQI GTAC 3 cut(s) 820, 960, 1700
DdeI CTNAG 7 cut(s) 137, 255, 462, 468, 572, 1383, 1407
DpnI GATC 9 cut(s) 45, 200, 312, 1171, 1389, 1433, 1464, 1656, 1671
DpnII GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
EaeI YGGCCR 1 cut(s) 1206
Ecl136II GAGCTC 1 cut(s) 1104
Eco24I GRGCYC 1 cut(s) 1106
Eco31I GGTCTC 1 cut(s) 722
Eco47I GGWCC 2 cut(s) 249, 863
Eco53kI GAGCTC 1 cut(s) 1104
Eco57I CTGAAG 1 cut(s) 357
Eco81I CCTNAGG 1 cut(s) 468
Eco88I CYCGRG 2 cut(s) 493, 1521
EcoICRI GAGCTC 1 cut(s) 1104
EcoO109I RGGNCCY 1 cut(s) 863
EcoRI GAATTC 1 cut(s) 1286
EcoRII CCWGG 2 cut(s) 940, 1507
EcoT22I ATGCAT 3 cut(s) 445, 1161, 1359
EcoT38I GRGCYC 1 cut(s) 1106
FaeI CATG 8 cut(s) 199, 746, 1163, 1187, 1219, 1277, 1357, 1543
FalI AAGNNNNNCTT 4 cut(s) 851, 883, 975, 1007
FaqI GGGAC 4 cut(s) 246, 511, 849, 1467
FatI CATG 8 cut(s) 195, 742, 1159, 1183, 1215, 1273, 1353, 1539
FbaI TGATCA 2 cut(s) 198, 310
Fnu4HI GCNGC 3 cut(s) 14, 32, 1004
FokI GGATG 3 cut(s) 475, 485, 854
FriOI GRGCYC 1 cut(s) 1106
Fsp4HI GCNGC 3 cut(s) 14, 32, 1004
FspBI CTAG 5 cut(s) 209, 294, 872, 1200, 1515
GluI GCNGC 3 cut(s) 14, 32, 1004
GsuI CTGGAG 2 cut(s) 672, 1712
HaeIII GGCC 4 cut(s) 307, 1198, 1208, 1566
HapII CCGG 2 cut(s) 6, 494
HgaI GACGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 123
Hin1II CATG 8 cut(s) 199, 746, 1163, 1187, 1219, 1277, 1357, 1543
HindIII AAGCTT 2 cut(s) 98, 390
HinfI GANTC 8 cut(s) 23, 183, 218, 259, 478, 800, 1316, 1624
HpaII CCGG 2 cut(s) 6, 494
HphI GGTGA 5 cut(s) 335, 510, 764, 940, 1065
Hpy99I CGWCG 1 cut(s) 86
HpyAV CCTTC 9 cut(s) 393, 538, 543, 877, 941, 977, 1157, 1273, 1556
HpyCH4III ACNGT 7 cut(s) 244, 502, 736, 903, 1249, 1307, 1681
HpyCH4IV ACGT 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 3 cut(s) 37, 106, 115
HpyF3I CTNAG 7 cut(s) 137, 255, 462, 468, 572, 1383, 1407
HpySE526I ACGT 1 cut(s) 132
Hsp92I GRCGYC 1 cut(s) 123
Hsp92II CATG 8 cut(s) 199, 746, 1163, 1187, 1219, 1277, 1357, 1543
KflI GGGWCCC 1 cut(s) 863
Ksp22I TGATCA 2 cut(s) 198, 310
Kzo9I GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
LmnI GCTCC 3 cut(s) 562, 696, 1101
Lsp1109I GCAGC 2 cut(s) 25, 43
LweI GCATC 5 cut(s) 96, 430, 452, 1099, 1146
MaeI CTAG 5 cut(s) 209, 294, 872, 1200, 1515
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 5 cut(s) 848, 1034, 1085, 1249, 1269
MalI GATC 9 cut(s) 45, 200, 312, 1171, 1389, 1433, 1464, 1656, 1671
MboI GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
MflI RGATCY 4 cut(s) 1169, 1387, 1654, 1669
MhlI GDGCHC 1 cut(s) 1106
MlsI TGGCCA 1 cut(s) 1208
MluCI AATT 8 cut(s) 144, 629, 932, 1264, 1286, 1488, 1661, 1684
MluNI TGGCCA 1 cut(s) 1208
MlyI GAGTC 4 cut(s) 17, 268, 472, 1325
MmeI TCCRAC 1 cut(s) 1573
Mox20I TGGCCA 1 cut(s) 1208
Mph1103I ATGCAT 3 cut(s) 445, 1161, 1359
MroXI GAANNNNTTC 1 cut(s) 987
MscI TGGCCA 1 cut(s) 1208
MseI TTAA 6 cut(s) 60, 351, 564, 665, 974, 1641
MslI CAYNNNNRTG 1 cut(s) 1362
Msp20I TGGCCA 1 cut(s) 1208
MspI CCGG 2 cut(s) 6, 494
MspR9I CCNGG 4 cut(s) 494, 495, 942, 1509
Mva1269I GAATGC 1 cut(s) 987
MvaI CCWGG 2 cut(s) 942, 1509
MvnI CGCG 1 cut(s) 1311
MwoI GCNNNNNNNGC 3 cut(s) 37, 106, 115
NciI CCSGG 2 cut(s) 494, 495
NdeII GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
NlaIII CATG 8 cut(s) 199, 746, 1163, 1187, 1219, 1277, 1357, 1543
NlaIV GGNNCC 5 cut(s) 251, 593, 864, 865, 952
NmeAIII GCCGAG 1 cut(s) 1174
NmuCI GTSAC 1 cut(s) 1269
NruI TCGCGA 1 cut(s) 1311
NsiI ATGCAT 3 cut(s) 445, 1161, 1359
NspI RCATGY 4 cut(s) 746, 1187, 1277, 1357
PaeI GCATGC 3 cut(s) 746, 1187, 1357
PagI TCATGA 1 cut(s) 195
PasI CCCWGGG 1 cut(s) 941
PciI ACATGT 1 cut(s) 1273
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 1 cut(s) 987
PdmI GAANNNNTTC 1 cut(s) 987
PfeI GAWTC 4 cut(s) 183, 218, 800, 1624
PflMI CCANNNNNTGG 1 cut(s) 738
PkrI GCNGC 3 cut(s) 15, 33, 1005
PleI GAGTC 4 cut(s) 17, 267, 472, 1324
PpsI GAGTC 4 cut(s) 17, 267, 472, 1324
Ppu21I YACGTR 1 cut(s) 133
PpuMI RGGWCCY 1 cut(s) 863
PscI ACATGT 1 cut(s) 1273
Psp124BI GAGCTC 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 863
Psp6I CCWGG 2 cut(s) 940, 1507
PspGI CCWGG 2 cut(s) 940, 1507
PspN4I GGNNCC 5 cut(s) 251, 593, 864, 865, 952
PspPI GGNCC 2 cut(s) 249, 863
PspPPI RGGWCCY 1 cut(s) 863
PstI CTGCAG 1 cut(s) 897
PstNI CAGNNNCTG 1 cut(s) 699
PsuI RGATCY 4 cut(s) 1169, 1387, 1654, 1669
RruI TCGCGA 1 cut(s) 1311
RsaI GTAC 3 cut(s) 821, 961, 1701
RsaNI GTAC 3 cut(s) 820, 960, 1700
RseI CAYNNNNRTG 1 cut(s) 1362
SacI GAGCTC 1 cut(s) 1106
SaqAI TTAA 6 cut(s) 60, 351, 564, 665, 974, 1641
SatI GCNGC 3 cut(s) 14, 32, 1004
Sau3AI GATC 9 cut(s) 43, 198, 310, 1169, 1387, 1431, 1462, 1654, 1669
Sau96I GGNCC 2 cut(s) 249, 863
ScaI AGTACT 1 cut(s) 821
SchI GAGTC 4 cut(s) 17, 268, 472, 1325
ScrFI CCNGG 4 cut(s) 494, 495, 942, 1509
SduI GDGCHC 1 cut(s) 1106
SfaNI GCATC 5 cut(s) 96, 430, 452, 1099, 1146
SfcI CTRYAG 1 cut(s) 893
SinI GGWCC 2 cut(s) 249, 863
SmaI CCCGGG 1 cut(s) 495
SmiMI CAYNNNNRTG 1 cut(s) 1362
SmlI CTYRAG 2 cut(s) 387, 1478
SmoI CTYRAG 2 cut(s) 387, 1478
SpeI ACTAGT 1 cut(s) 293
SphI GCATGC 3 cut(s) 746, 1187, 1357
Sse9I AATT 8 cut(s) 144, 629, 932, 1264, 1286, 1488, 1661, 1684
SsiI CCGC 2 cut(s) 683, 1003
SspI AATATT 1 cut(s) 1438
SspMI CTAG 5 cut(s) 209, 294, 872, 1200, 1515
SstI GAGCTC 1 cut(s) 1106
StyD4I CCNGG 4 cut(s) 492, 493, 940, 1507
TaaI ACNGT 7 cut(s) 244, 502, 736, 903, 1249, 1307, 1681
TaiI ACGT 1 cut(s) 135
TaqI TCGA 6 cut(s) 46, 355, 615, 726, 1449, 1627
TaqII GACCGA 2 cut(s) 128, 792
TasI AATT 8 cut(s) 144, 629, 932, 1264, 1286, 1488, 1661, 1684
TatI WGTACW 1 cut(s) 819
TauI GCSGC 1 cut(s) 1006
TfiI GAWTC 4 cut(s) 183, 218, 800, 1624
Tru1I TTAA 6 cut(s) 60, 351, 564, 665, 974, 1641
Tru9I TTAA 6 cut(s) 60, 351, 564, 665, 974, 1641
TscAI CASTG 5 cut(s) 341, 507, 961, 1119, 1695
TseFI GTSAC 1 cut(s) 1269
TseI GCWGC 2 cut(s) 13, 31
Tsp45I GTSAC 1 cut(s) 1269
TspDTI ATGAA 8 cut(s) 175, 184, 231, 276, 1059, 1176, 1279, 1488
TspGWI ACGGA 1 cut(s) 1016
TspMI CCCGGG 1 cut(s) 493
TspRI CASTG 5 cut(s) 341, 507, 961, 1119, 1695
Van91I CCANNNNNTGG 1 cut(s) 738
VpaK11BI GGWCC 2 cut(s) 249, 863
XapI RAATTY 5 cut(s) 144, 932, 1286, 1488, 1684
XceI RCATGY 4 cut(s) 746, 1187, 1277, 1357
XmaI CCCGGG 1 cut(s) 493
XmnI GAANNNNTTC 1 cut(s) 987
XspI CTAG 5 cut(s) 209, 294, 872, 1200, 1515
ZrmI AGTACT 1 cut(s) 821
Zsp2I ATGCAT 3 cut(s) 445, 1161, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.