RchiOBHm_Chr2g0091731
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000505
Physical Location & Seq
Forward (+)
5413415 .. 5417779
4365 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46690

Sequence Viewer

Length: 1635 bp
ATGATTGATGGAGTGCTTGAATTTCTATATCAAAATTTGCAGCTTCCACCAAGAACTTTGAAGATTCGATCATCAATGGTTAAAGTTGAGCCAGATCCAAAATTGTCAGATCCTCAAACAGTGAATTCACTGGAGATAGTAGGAACAAGTAAACTTAATAAGAGAACGTATTTGTCGAGGAACTTAATTGCACTTTTGTACCATGGAGGGGTGCCAAAAAAATACTTCATCGAGTTACTTATGAAAGCTTTAGAAGAGACTCGTGACGTTTTTAGCAATCCACGCGCAGCATTCAGAGTTGCCCTTAGATATGGCGAGATCGATGACAACCGTACTGTTGCGAAAATGATCTCCTGTGGTATTCCTCTTGAAGAACCATATGTGCAATATCGTCTTTCAACCCTTATGGACATGGAAAAGATCAATCTCAAAAAAGGGAAAATTTGTATTCCTGAATCATACTATTTGATGGGGACAGCTGACCCAACAGGAAAACTTGAAAAAGATGAAGTTTGCATTATCCTAGAAAATGGACAACTACTGTCGGGAGATTTTCTAGTGTACCGGAATCCTGGTTTACACTTTGGTGATATTCATGTCCTAAAGGCCAGATATGTCAAGGAACTAGAATCTGTTGTTGGCAAGGCCAAGTACGGTATATTCTTCTCTAGTAAAGGTCCACGTTCCGTTGCTGATGAAATGGCTGGTGGAGATTTTGATGGTGATCTATACTGGATCTCAAGAAACCCTCAGCTATTAAAATCGTTTAAACCAAGTGAACCATGGATTGGAAAGTCATCTGCCCAAAAAGTTCATGGTAAAAGACCAACCGAGCTTTCAAAGGATGATCTAGAAGATGAGCTCATCAAACTATTCTTGAAGACTAGGTTTGAACCAAGCTTCGCATTGTATGAGGCAGCTCAAAACTGGATGGCTTTGATGGATAAATTTTTGACTCTAGGAGATACGAGTATTGATGTGAAAAAAAAACTGAAGGACAAGATACTGCGATTAATTGATATTTACTATGAAGCTCTCGATGCACCAAAAAAAGGTTTTGAGGTTGTAGTTCCAAAAGAATTGAAGGTGCGAGAGTTCCCACATTTCATGGAGAAGAAAAACCAAGAATCCTACCATTCAAGTTCCATTTTGGGATCCATTTATGATAAGGTGGAGGAATTTAAAACAGAAGACAGATCTCTCAAAGAAATTCGGAAACTTCCTCTTTTTGAAGACGACGTTCCTGAGGACCGCTTGAAAGAATGGGAGAAACGATACAAAGAGTACCGGAAGAAGATGACCTCTGCCATGGGAAATGAAGATAAAGAGAGCAAGAATCAGGCAGCCAATATCGTCATAAGAGAGTATAAAGAGATCCTATTCGAGGCTGAGGAGTTTGAGGAAAGTAAAAGGGACAGACAACAAATATATAACGACGCACTCGCTATTTATCATGTTTGTTATGACTATGCCAGGAGTGTGAGGACTGAAACTGGGGCACAAGATGTCGGGAAATGTGGCTTTGTCTGGAAAGTTGCAGGTGCAGCTCTATGCCAGCTTCATGAGGACCGGAGTTTGAAACCTGGTGAAAAGGTTTTCAGGATCTTACCCTCTGTTTTGAAGGATATTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

544

Amino Acids

62.73

Weight (kDa)

7.94

Isoelectric Point (pI)

32.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RdRP PF05183 16 - 391 2.8e-77 RNA dependent RNA polymerase
RdRP_head PF26253 424 - 523 6.7e-13 RdRP, head domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1529
Acc36I ACCTGC 1 cut(s) 1529
AccB1I GGYRCC 1 cut(s) 211
AccB7I CCANNNNNTGG 1 cut(s) 788
AccII CGCG 1 cut(s) 285
AciI CCGC 1 cut(s) 1252
AclWI GGATC 7 cut(s) 89, 104, 743, 1149, 1162, 1369, 1610
AcsI RAATTY 7 cut(s) 20, 34, 124, 441, 947, 1178, 1209
AcuI CTGAAG 1 cut(s) 1013
AfaI GTAC 5 cut(s) 200, 334, 563, 653, 1286
AfiI CCNNNNNNNGG 4 cut(s) 208, 788, 1052, 1384
AjnI CCWGG 3 cut(s) 571, 1472, 1582
AjuI GAANNNNNNNTTGG 6 cut(s) 621, 653, 771, 803, 820, 852
AleI CACNNNNGTG 1 cut(s) 585
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 1 cut(s) 251
AlwI GGATC 7 cut(s) 89, 104, 743, 1149, 1162, 1369, 1610
AoxI GGCC 2 cut(s) 606, 645
ApeKI GCWGC 5 cut(s) 40, 287, 917, 1343, 1544
ApoI RAATTY 7 cut(s) 20, 34, 124, 441, 947, 1178, 1209
AseI ATTAAT 1 cut(s) 1013
AspLEI GCGC 1 cut(s) 287
AspS9I GGNCC 3 cut(s) 677, 1249, 1567
AsuHPI GGTGA 3 cut(s) 599, 734, 1598
AvaII GGWCC 3 cut(s) 677, 1249, 1567
AxyI CCTNAGG 1 cut(s) 1245
BaeGI GKGCMC 1 cut(s) 1501
BaeI ACNNNNGTAYC 2 cut(s) 182, 215
BamHI GGATCC 1 cut(s) 1154
BanI GGYRCC 1 cut(s) 211
BanII GRGCYC 1 cut(s) 864
BauI CACGAG 1 cut(s) 261
BbsI GAAGAC 3 cut(s) 887, 1197, 1239
Bbv12I GWGCWC 1 cut(s) 864
BbvCI CCTCAGC 2 cut(s) 750, 1389
BbvI GCAGC 5 cut(s) 52, 299, 929, 1355, 1556
BccI CCATC 5 cut(s) 2, 463, 713, 925, 934
BciT130I CCWGG 3 cut(s) 573, 1474, 1584
BcoDI GTCTC 1 cut(s) 251
BfaI CTAG 7 cut(s) 524, 557, 626, 669, 851, 885, 959
BfuAI ACCTGC 1 cut(s) 1529
BglII AGATCT 1 cut(s) 1196
BisI GCNGC 5 cut(s) 41, 288, 918, 1344, 1545
BlsI GCNGC 5 cut(s) 42, 289, 919, 1345, 1546
Bme1390I CCNGG 3 cut(s) 573, 1474, 1584
Bme18I GGWCC 3 cut(s) 677, 1249, 1567
BmgT120I GGNCC 3 cut(s) 677, 1249, 1567
BmiI GGNNCC 2 cut(s) 213, 1156
BmrFI CCNGG 3 cut(s) 573, 1474, 1584
BmrI ACTGGG 1 cut(s) 1503
BmsI GCATC 1 cut(s) 1030
BmuI ACTGGG 1 cut(s) 1503
BpiI GAAGAC 3 cut(s) 887, 1197, 1239
BpmI CTGGAG 1 cut(s) 152
Bpu10I CCTNAGC 2 cut(s) 750, 1389
BpuEI CTTGAG 1 cut(s) 724
Bsa29I ATCGAT 1 cut(s) 321
BsaBI GATNNNNATC 1 cut(s) 723
BsaJI CCNNGG 3 cut(s) 202, 782, 1308
BsaWI WCCGGW 3 cut(s) 564, 1287, 1569
Bsc4I CCNNNNNNNGG 4 cut(s) 208, 788, 1052, 1384
Bse1I ACTGG 4 cut(s) 135, 737, 932, 1498
Bse21I CCTNAGG 1 cut(s) 1245
Bse8I GATNNNNATC 1 cut(s) 723
BseBI CCWGG 3 cut(s) 573, 1474, 1584
BseCI ATCGAT 1 cut(s) 321
BseDI CCNNGG 3 cut(s) 202, 782, 1308
BseGI GGATG 2 cut(s) 850, 936
BseJI GATNNNNATC 1 cut(s) 723
BseLI CCNNNNNNNGG 4 cut(s) 208, 788, 1052, 1384
BseMII CTCAG 3 cut(s) 764, 1236, 1380
BseNI ACTGG 4 cut(s) 135, 737, 932, 1498
BseRI GAGGAG 1 cut(s) 1406
BseSI GKGCMC 1 cut(s) 1501
BseXI GCAGC 5 cut(s) 52, 299, 929, 1355, 1556
BsgI GTGCAG 1 cut(s) 1563
Bsh1236I CGCG 1 cut(s) 285
BshFI GGCC 2 cut(s) 608, 647
BshNI GGYRCC 1 cut(s) 211
BshVI ATCGAT 1 cut(s) 321
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 3 cut(s) 565, 1288, 1570
BslFI GGGAC 2 cut(s) 487, 1427
BslI CCNNNNNNNGG 4 cut(s) 208, 788, 1052, 1384
BsmAI GTCTC 1 cut(s) 251
BsmFI GGGAC 2 cut(s) 487, 1427
BsmI GAATGC 1 cut(s) 290
BsnI GGCC 2 cut(s) 608, 647
Bsp1286I GDGCHC 2 cut(s) 864, 1501
Bsp19I CCATGG 3 cut(s) 202, 782, 1308
BspACI CCGC 1 cut(s) 1252
BspANI GGCC 2 cut(s) 608, 647
BspCNI CTCAG 3 cut(s) 763, 1237, 1381
BspDI ATCGAT 1 cut(s) 321
BspFNI CGCG 1 cut(s) 285
BspHI TCATGA 1 cut(s) 1561
BspLI GGNNCC 2 cut(s) 213, 1156
BspMI ACCTGC 1 cut(s) 1529
BspPI GGATC 7 cut(s) 89, 104, 743, 1149, 1162, 1369, 1610
BspT107I GGYRCC 1 cut(s) 211
BsrI ACTGG 4 cut(s) 135, 737, 932, 1498
BssECI CCNNGG 3 cut(s) 202, 782, 1308
BssSI CACGAG 1 cut(s) 261
BssT1I CCWWGG 3 cut(s) 202, 782, 1308
Bst2BI CACGAG 1 cut(s) 261
Bst2UI CCWGG 3 cut(s) 573, 1474, 1584
Bst4CI ACNGT 5 cut(s) 121, 332, 337, 543, 656
Bst6I CTCTTC 1 cut(s) 249
BstC8I GCNNGC 1 cut(s) 1556
BstDEI CTNAG 4 cut(s) 305, 750, 1245, 1389
BstDSI CCRYGG 3 cut(s) 202, 782, 1308
BstENI CCTNNNNNAGG 1 cut(s) 1382
BstF5I GGATG 2 cut(s) 850, 936
BstFNI CGCG 1 cut(s) 285
BstHHI GCGC 1 cut(s) 287
BstMAI GTCTC 1 cut(s) 251
BstMWI GCNNNNNNNGC 3 cut(s) 282, 1040, 1544
BstNI CCWGG 3 cut(s) 573, 1474, 1584
BstSCI CCNGG 3 cut(s) 571, 1472, 1582
BstSLI GKGCMC 1 cut(s) 1501
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 5 cut(s) 52, 299, 929, 1355, 1556
BstV2I GAAGAC 3 cut(s) 887, 1197, 1239
BstX2I RGATCY 7 cut(s) 94, 109, 735, 1154, 1196, 1374, 1602
BstYI RGATCY 7 cut(s) 94, 109, 735, 1154, 1196, 1374, 1602
Bsu15I ATCGAT 1 cut(s) 321
Bsu36I CCTNAGG 1 cut(s) 1245
BsuRI GGCC 2 cut(s) 608, 647
BsuTUI ATCGAT 1 cut(s) 321
BtgI CCRYGG 3 cut(s) 202, 782, 1308
BtsCI GGATG 2 cut(s) 850, 936
BtsIMutI CAGTG 2 cut(s) 126, 128
BveI ACCTGC 1 cut(s) 1529
Cac8I GCNNGC 1 cut(s) 1556
CciI TCATGA 1 cut(s) 1561
CfoI GCGC 1 cut(s) 287
Cfr13I GGNCC 3 cut(s) 677, 1249, 1567
ClaI ATCGAT 1 cut(s) 321
CseI GACGC 1 cut(s) 1445
CsiI ACCWGGT 1 cut(s) 1582
Csp6I GTAC 5 cut(s) 199, 333, 562, 652, 1285
CviAII CATG 9 cut(s) 203, 412, 596, 783, 815, 1108, 1309, 1454, 1562
CviQI GTAC 5 cut(s) 199, 333, 562, 652, 1285
DdeI CTNAG 4 cut(s) 305, 750, 1245, 1389
DraI TTTAAA 2 cut(s) 769, 1183
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
Ecl136II GAGCTC 1 cut(s) 862
Eco130I CCWWGG 3 cut(s) 202, 782, 1308
Eco24I GRGCYC 1 cut(s) 864
Eco47I GGWCC 3 cut(s) 677, 1249, 1567
Eco53kI GAGCTC 1 cut(s) 862
Eco57I CTGAAG 1 cut(s) 1013
Eco81I CCTNAGG 1 cut(s) 1245
EcoICRI GAGCTC 1 cut(s) 862
EcoNI CCTNNNNNAGG 1 cut(s) 1382
EcoRI GAATTC 1 cut(s) 124
EcoRII CCWGG 3 cut(s) 571, 1472, 1582
EcoT14I CCWWGG 3 cut(s) 202, 782, 1308
EcoT38I GRGCYC 1 cut(s) 864
ErhI CCWWGG 3 cut(s) 202, 782, 1308
FaeI CATG 9 cut(s) 206, 415, 599, 786, 818, 1111, 1312, 1457, 1565
FaqI GGGAC 2 cut(s) 487, 1427
FatI CATG 9 cut(s) 202, 411, 595, 782, 814, 1107, 1308, 1453, 1561
FauNDI CATATG 1 cut(s) 379
Fnu4HI GCNGC 5 cut(s) 41, 288, 918, 1344, 1545
FokI GGATG 2 cut(s) 857, 943
FriOI GRGCYC 1 cut(s) 864
Fsp4HI GCNGC 5 cut(s) 41, 288, 918, 1344, 1545
FspBI CTAG 7 cut(s) 524, 557, 626, 669, 851, 885, 959
GlaI GCGC 1 cut(s) 286
GluI GCNGC 5 cut(s) 41, 288, 918, 1344, 1545
GsuI CTGGAG 1 cut(s) 152
HaeIII GGCC 2 cut(s) 608, 647
HapII CCGG 3 cut(s) 565, 1288, 1570
HgaI GACGC 1 cut(s) 1445
HhaI GCGC 1 cut(s) 287
Hin1II CATG 9 cut(s) 206, 415, 599, 786, 818, 1111, 1312, 1457, 1565
Hin6I GCGC 1 cut(s) 285
HinP1I GCGC 1 cut(s) 285
HindIII AAGCTT 2 cut(s) 246, 898
HinfI GANTC 8 cut(s) 64, 259, 455, 568, 629, 955, 1127, 1336
HpaII CCGG 3 cut(s) 565, 1288, 1570
HphI GGTGA 3 cut(s) 599, 734, 1598
Hpy166II GTNNAC 5 cut(s) 152, 562, 578, 680, 779
Hpy188I TCNGA 3 cut(s) 109, 296, 1215
Hpy8I GTNNAC 5 cut(s) 152, 562, 578, 680, 779
Hpy99I CGWCG 2 cut(s) 1241, 1439
HpyAV CCTTC 3 cut(s) 988, 1078, 1615
HpyCH4III ACNGT 5 cut(s) 121, 332, 337, 543, 656
HpyCH4IV ACGT 4 cut(s) 167, 267, 682, 1239
HpyCH4V TGCA 7 cut(s) 40, 191, 385, 516, 1043, 1538, 1544
HpyF10VI GCNNNNNNNGC 3 cut(s) 282, 1040, 1544
HpyF3I CTNAG 4 cut(s) 305, 750, 1245, 1389
HpySE526I ACGT 4 cut(s) 167, 267, 682, 1239
Hsp92II CATG 9 cut(s) 206, 415, 599, 786, 818, 1111, 1312, 1457, 1565
HspAI GCGC 1 cut(s) 285
Lsp1109I GCAGC 5 cut(s) 52, 299, 929, 1355, 1556
LweI GCATC 1 cut(s) 1030
MabI ACCWGGT 1 cut(s) 1582
MaeI CTAG 7 cut(s) 524, 557, 626, 669, 851, 885, 959
MaeII ACGT 4 cut(s) 167, 267, 682, 1239
MaeIII GTNAC 2 cut(s) 234, 263
MflI RGATCY 7 cut(s) 94, 109, 735, 1154, 1196, 1374, 1602
MhlI GDGCHC 2 cut(s) 864, 1501
MlyI GAGTC 2 cut(s) 253, 949
MseI TTAA 7 cut(s) 81, 156, 185, 758, 768, 1013, 1182
MslI CAYNNNNRTG 1 cut(s) 585
MspA1I CMGCKG 1 cut(s) 479
MspI CCGG 3 cut(s) 565, 1288, 1570
MspR9I CCNGG 3 cut(s) 573, 1474, 1584
MssI GTTTAAAC 1 cut(s) 769
Mva1269I GAATGC 1 cut(s) 290
MvaI CCWGG 3 cut(s) 573, 1474, 1584
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 3 cut(s) 282, 1040, 1544
NcoI CCATGG 3 cut(s) 202, 782, 1308
NdeI CATATG 1 cut(s) 379
NlaIII CATG 9 cut(s) 206, 415, 599, 786, 818, 1111, 1312, 1457, 1565
NlaIV GGNNCC 2 cut(s) 213, 1156
NmuCI GTSAC 1 cut(s) 263
OliI CACNNNNGTG 1 cut(s) 585
PagI TCATGA 1 cut(s) 1561
PaqCI CACCTGC 1 cut(s) 1529
PcsI WCGNNNNNNNCGW 1 cut(s) 173
PctI GAATGC 1 cut(s) 290
PfeI GAWTC 6 cut(s) 64, 455, 568, 629, 1127, 1336
PflMI CCANNNNNTGG 1 cut(s) 788
PkrI GCNGC 5 cut(s) 42, 289, 919, 1345, 1546
PleI GAGTC 2 cut(s) 253, 949
PmeI GTTTAAAC 1 cut(s) 769
PpsI GAGTC 2 cut(s) 253, 949
PshBI ATTAAT 1 cut(s) 1013
Psp124BI GAGCTC 1 cut(s) 864
Psp6I CCWGG 3 cut(s) 571, 1472, 1582
PspGI CCWGG 3 cut(s) 571, 1472, 1582
PspN4I GGNNCC 2 cut(s) 213, 1156
PspPI GGNCC 3 cut(s) 677, 1249, 1567
PsuI RGATCY 7 cut(s) 94, 109, 735, 1154, 1196, 1374, 1602
PvuII CAGCTG 1 cut(s) 479
RsaI GTAC 5 cut(s) 200, 334, 563, 653, 1286
RsaNI GTAC 5 cut(s) 199, 333, 562, 652, 1285
RseI CAYNNNNRTG 1 cut(s) 585
SacI GAGCTC 1 cut(s) 864
SaqAI TTAA 7 cut(s) 81, 156, 185, 758, 768, 1013, 1182
SatI GCNGC 5 cut(s) 41, 288, 918, 1344, 1545
Sau96I GGNCC 3 cut(s) 677, 1249, 1567
SchI GAGTC 2 cut(s) 253, 949
ScrFI CCNGG 3 cut(s) 573, 1474, 1584
SduI GDGCHC 2 cut(s) 864, 1501
SexAI ACCWGGT 1 cut(s) 1582
SfaNI GCATC 1 cut(s) 1030
SinI GGWCC 3 cut(s) 677, 1249, 1567
SmiMI CAYNNNNRTG 1 cut(s) 585
SmlI CTYRAG 1 cut(s) 739
SmoI CTYRAG 1 cut(s) 739
SsiI CCGC 1 cut(s) 1252
SspMI CTAG 7 cut(s) 524, 557, 626, 669, 851, 885, 959
SstI GAGCTC 1 cut(s) 864
StyD4I CCNGG 3 cut(s) 571, 1472, 1582
StyI CCWWGG 3 cut(s) 202, 782, 1308
TaaI ACNGT 5 cut(s) 121, 332, 337, 543, 656
TaiI ACGT 4 cut(s) 170, 270, 685, 1242
TaqI TCGA 6 cut(s) 67, 176, 231, 321, 1038, 1383
TfiI GAWTC 6 cut(s) 64, 455, 568, 629, 1127, 1336
Tru1I TTAA 7 cut(s) 81, 156, 185, 758, 768, 1013, 1182
Tru9I TTAA 7 cut(s) 81, 156, 185, 758, 768, 1013, 1182
TscAI CASTG 2 cut(s) 126, 135
TseFI GTSAC 1 cut(s) 263
TseI GCWGC 5 cut(s) 40, 287, 917, 1343, 1544
Tsp45I GTSAC 1 cut(s) 263
TspGWI ACGGA 1 cut(s) 676
TspRI CASTG 2 cut(s) 126, 135
Van91I CCANNNNNTGG 1 cut(s) 788
VpaK11BI GGWCC 3 cut(s) 677, 1249, 1567
VspI ATTAAT 1 cut(s) 1013
XagI CCTNNNNNAGG 1 cut(s) 1382
XapI RAATTY 7 cut(s) 20, 34, 124, 441, 947, 1178, 1209
XbaI TCTAGA 1 cut(s) 850
XcmI CCANNNNNNNNNTGG 2 cut(s) 780, 812
XspI CTAG 7 cut(s) 524, 557, 626, 669, 851, 885, 959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.