Rorug02G0019600
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000505
Physical Location & Seq
Forward (+)
1605970 .. 1608541
2572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0019600.1

Sequence Viewer

Length: 1461 bp
ATGTTTTCTTGGGCATCTTCAAGAAGATCTTCAGGGGTTGTTTTGGGTGTTCAACGACTCGGCTCTCGCACATTGTTCAGTAAATCACAACCCTCATCATCGCCATCTTCGTCTTCTTCGATCAGCCCATCATGTGGTGGCAGTTTTGTCTGTAATAGTGAGTACAATCACAAGAGTAGATCAGGTTCCTCCAATAAGGGTGGTAAATTTGATTTGATTCAGAGGTCAGTTTCTTCAGGGGTTCTAATTCTCGGGTCAAGCATAGGCTATTCTTATTGGTCATCTTCTACCTTGGATCCAAACGCCTCTGTTTGTTTTGCTGATTCCAAAGAGGAGGCAGCTGCATGGGCAATCGAGCAGGACCCAGAACAATTCAAGTCCCTCTTTTCAAATACATTTAGGAGAAAGAAGTTCTTTACGTATGAAAAAAAGATAAGAGAGCGAAGTACCCCTGAAAAGATTTTTAGTTACTTTGCATCAGTTCGAACCCCTAGCGGAGAGTGCTTTATGACTCCGGGGGACTTGATGCGAGCTGTTGTTCCTGTGTTTCCTCCCTATGATTCAAATCGGGTTCGAGAAGGCTCTTTAAGAGGGGAAAATGTTCCTGGAGAATTGCAATGTGCTCCTTCTAAATTCTTCATGCTTTTCGACACTGATGGTGATGGCCTCATTTCATTTCAAGAGTACATGTTTTTCGTCACTCTCCTCAGCATTCCTGAATCGAGTTTTACTGTGGCTTTTAAAATGTTCGATCTTGACAACAGTGGAGACATTGATAAGGAAGAGTTTAACAGAGTTATGGCATTGATGCGAAATCACAACAATAAAATCAAGGACGGCCACAGGGTCAAAGTTGGTGTAGAAGAGGGAGGAATACTCGAGTACTTCTTCGGCAAAGACGGCAAAAAAGGCCTCAAGCATGAAAGATTTGTTCAGTTTTTCAGGGATTTACACGAGGAAATGTTGCGCTTGGAGTTTGCTCATTATGACTACAAATCAAAAGGAACCATAACAGCTAAAGATTTTGCCTTGTCCTTGGTTGCATCTGCTGATCTCAGTGACTTATACAAGTTGCTTGATCGTGTTGACGATATTAACAACGCCCCACGTCTTAACAACATACAAATTACATACAAGGAATTTAAAGATTTTGCAGAGCTACGCAAGAATTTGCAGTCTTTCTCTTTGGCCATTTTCAGCTACGGCGAGGTTAATGGGGTTTTGACAAAATCAGATCTCCAGAGAGCAGCTTCCAAAGTATGTGGCATCAATGTTACAGACAATGTGATGGACATAATCTTCCATGTATTTGATGCAAACGGTGATGGTGACCTAAGTGCGAATGAGTTTGTCAAAGTTTTACAGAACCGTGGAGGTGAACCTGTAGAGTCAGGCCTCAGGGGATTCCTAACTTGCTTCTTAAACTGTGCAACTAAAAGCTGCTCCTACGCTCAGACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

486

Amino Acids

54.29

Weight (kDa)

7.04

Isoelectric Point (pI)

45.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EF-hand_5 PF13202 246 - 267 2.6e-06 EF hand
EF-hand_8 PF13833 405 - 456 4.2e-08 EF-hand domain pair
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 134
AciI CCGC 1 cut(s) 495
AclWI GGATC 2 cut(s) 290, 303
AcoI YGGCCR 2 cut(s) 838, 1188
AcsI RAATTY 4 cut(s) 206, 632, 1139, 1168
AcuI CTGAAG 2 cut(s) 15, 219
AfaI GTAC 4 cut(s) 164, 448, 686, 884
AfiI CCNNNNNNNGG 1 cut(s) 134
AflIII ACRYGT 1 cut(s) 687
AgsI TTSAA 6 cut(s) 21, 53, 376, 390, 564, 680
AjiI CACGTC 1 cut(s) 1109
AjnI CCWGG 1 cut(s) 604
AluBI AGCT 7 cut(s) 341, 533, 1016, 1159, 1200, 1250, 1440
AluI AGCT 7 cut(s) 341, 533, 1016, 1159, 1200, 1250, 1440
Alw21I GWGCWC 1 cut(s) 625
Alw26I GTCTC 1 cut(s) 762
AlwI GGATC 2 cut(s) 290, 303
Ama87I CYCGRG 2 cut(s) 251, 878
AoxI GGCC 5 cut(s) 664, 838, 910, 1188, 1393
ApeKI GCWGC 4 cut(s) 338, 341, 1247, 1440
ApoI RAATTY 4 cut(s) 206, 632, 1139, 1168
Asp700I GAANNNNTTC 2 cut(s) 28, 600
AspLEI GCGC 1 cut(s) 969
AspS9I GGNCC 1 cut(s) 361
AsuC2I CCSGG 1 cut(s) 516
AsuHPI GGTGA 4 cut(s) 671, 1334, 1340, 1388
AsuII TTCGAA 1 cut(s) 484
AvaI CYCGRG 2 cut(s) 251, 878
AvaII GGWCC 1 cut(s) 361
AxyI CCTNAGG 1 cut(s) 1397
BalI TGGCCA 1 cut(s) 1190
BamHI GGATCC 1 cut(s) 295
BauI CACGAG 1 cut(s) 953
BbsI GAAGAC 1 cut(s) 105
Bbv12I GWGCWC 1 cut(s) 625
BbvCI CCTCAGC 1 cut(s) 707
BbvI GCAGC 4 cut(s) 328, 350, 1259, 1427
BccI CCATC 6 cut(s) 112, 136, 650, 656, 1282, 1319
BceAI ACGGC 3 cut(s) 853, 916, 1219
BciT130I CCWGG 1 cut(s) 606
BcnI CCSGG 1 cut(s) 516
BcoDI GTCTC 1 cut(s) 762
BfaI CTAG 1 cut(s) 492
BfmI CTRYAG 1 cut(s) 1383
BglII AGATCT 2 cut(s) 26, 1234
BisI GCNGC 4 cut(s) 339, 342, 1248, 1441
BlsI GCNGC 4 cut(s) 340, 343, 1249, 1442
BmcAI AGTACT 1 cut(s) 884
Bme1390I CCNGG 2 cut(s) 516, 606
Bme18I GGWCC 1 cut(s) 361
BmeT110I CYCGRG 2 cut(s) 251, 878
BmgBI CACGTC 1 cut(s) 1109
BmgT120I GGNCC 1 cut(s) 361
BmiI GGNNCC 4 cut(s) 187, 297, 363, 1006
BmrFI CCNGG 2 cut(s) 516, 606
BmsI GCATC 7 cut(s) 23, 485, 516, 798, 1052, 1275, 1303
BpiI GAAGAC 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 861, 893
BpmI CTGGAG 2 cut(s) 627, 1223
Bpu10I CCTNAGC 1 cut(s) 707
Bpu14I TTCGAA 1 cut(s) 484
BpuEI CTTGAG 1 cut(s) 899
BpuMI CCSGG 1 cut(s) 516
BsaAI YACGTR 1 cut(s) 420
BsaBI GATNNNNATC 1 cut(s) 564
BsaJI CCNNGG 4 cut(s) 291, 515, 1035, 1369
Bsc4I CCNNNNNNNGG 1 cut(s) 134
Bse21I CCTNAGG 1 cut(s) 1397
Bse3DI GCAATG 1 cut(s) 623
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 1 cut(s) 606
BseDI CCNNGG 4 cut(s) 291, 515, 1035, 1369
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 1 cut(s) 134
BseMI GCAATG 1 cut(s) 623
BseMII CTCAG 3 cut(s) 721, 1069, 1411
BseRI GAGGAG 2 cut(s) 347, 695
BseXI GCAGC 4 cut(s) 328, 350, 1259, 1427
BshFI GGCC 5 cut(s) 666, 840, 912, 1190, 1395
BsiHKAI GWGCWC 1 cut(s) 625
BsiHKCI CYCGRG 2 cut(s) 251, 878
BsiSI CCGG 1 cut(s) 515
BslFI GGGAC 2 cut(s) 364, 533
BslI CCNNNNNNNGG 1 cut(s) 134
BsmAI GTCTC 1 cut(s) 762
BsmFI GGGAC 2 cut(s) 364, 533
BsmI GAATGC 1 cut(s) 711
BsnI GGCC 5 cut(s) 666, 840, 912, 1190, 1395
BsoBI CYCGRG 2 cut(s) 251, 878
Bsp119I TTCGAA 1 cut(s) 484
Bsp1286I GDGCHC 1 cut(s) 625
Bsp143I GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
BspACI CCGC 1 cut(s) 495
BspANI GGCC 5 cut(s) 666, 840, 912, 1190, 1395
BspCNI CTCAG 3 cut(s) 720, 1068, 1410
BspLI GGNNCC 4 cut(s) 187, 297, 363, 1006
BspPI GGATC 2 cut(s) 290, 303
BspT104I TTCGAA 1 cut(s) 484
BsrDI GCAATG 1 cut(s) 623
BssECI CCNNGG 4 cut(s) 291, 515, 1035, 1369
BssMI GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
BssSI CACGAG 1 cut(s) 953
BssT1I CCWWGG 2 cut(s) 291, 1035
Bst2BI CACGAG 1 cut(s) 953
Bst2UI CCWGG 1 cut(s) 606
Bst4CI ACNGT 5 cut(s) 733, 764, 1322, 1370, 1427
Bst6I CTCTTC 2 cut(s) 777, 858
BstBAI YACGTR 1 cut(s) 420
BstBI TTCGAA 1 cut(s) 484
BstC8I GCNNGC 1 cut(s) 531
BstDEI CTNAG 5 cut(s) 707, 1055, 1334, 1397, 1452
BstDSI CCRYGG 1 cut(s) 1369
BstEII GGTNACC 1 cut(s) 1328
BstHHI GCGC 1 cut(s) 969
BstKTI GATC 8 cut(s) 29, 123, 182, 298, 754, 1054, 1081, 1237
BstMAI GTCTC 1 cut(s) 762
BstMBI GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
BstMWI GCNNNNNNNGC 4 cut(s) 347, 501, 900, 909
BstNI CCWGG 1 cut(s) 606
BstNSI RCATGY 1 cut(s) 691
BstPI GGTNACC 1 cut(s) 1328
BstSCI CCNGG 2 cut(s) 514, 604
BstSFI CTRYAG 1 cut(s) 1383
BstSNI TACGTA 1 cut(s) 420
BstV1I GCAGC 4 cut(s) 328, 350, 1259, 1427
BstV2I GAAGAC 1 cut(s) 105
BstX2I RGATCY 3 cut(s) 26, 295, 1234
BstYI RGATCY 3 cut(s) 26, 295, 1234
Bsu36I CCTNAGG 1 cut(s) 1397
BsuRI GGCC 5 cut(s) 666, 840, 912, 1190, 1395
BtgI CCRYGG 1 cut(s) 1369
BtgZI GCGATG 1 cut(s) 84
BtrI CACGTC 1 cut(s) 1109
BtsIMutI CAGTG 3 cut(s) 651, 769, 1063
Cac8I GCNNGC 1 cut(s) 531
CfoI GCGC 1 cut(s) 969
Cfr13I GGNCC 1 cut(s) 361
Csp6I GTAC 4 cut(s) 163, 447, 685, 883
CspCI CAANNNNNGTGG 4 cut(s) 181, 216, 1243, 1278
CviAII CATG 6 cut(s) 132, 345, 640, 688, 920, 1304
CviQI GTAC 4 cut(s) 163, 447, 685, 883
DdeI CTNAG 5 cut(s) 707, 1055, 1334, 1397, 1452
DpnI GATC 8 cut(s) 28, 122, 181, 297, 753, 1053, 1080, 1236
DpnII GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
DraI TTTAAA 2 cut(s) 742, 1144
EaeI YGGCCR 2 cut(s) 838, 1188
Eam1104I CTCTTC 2 cut(s) 777, 858
EarI CTCTTC 2 cut(s) 777, 858
Eco105I TACGTA 1 cut(s) 420
Eco130I CCWWGG 2 cut(s) 291, 1035
Eco147I AGGCCT 2 cut(s) 912, 1395
Eco47I GGWCC 1 cut(s) 361
Eco57I CTGAAG 2 cut(s) 15, 219
Eco81I CCTNAGG 1 cut(s) 1397
Eco88I CYCGRG 2 cut(s) 251, 878
Eco91I GGTNACC 1 cut(s) 1328
EcoO109I RGGNCCY 1 cut(s) 361
EcoO65I GGTNACC 1 cut(s) 1328
EcoRII CCWGG 1 cut(s) 604
EcoT14I CCWWGG 2 cut(s) 291, 1035
ErhI CCWWGG 2 cut(s) 291, 1035
FaeI CATG 6 cut(s) 135, 348, 643, 691, 923, 1307
FalI AAGNNNNNCTT 6 cut(s) 13, 45, 368, 400, 398, 430
FaqI GGGAC 2 cut(s) 364, 533
FatI CATG 6 cut(s) 131, 344, 639, 687, 919, 1303
Fnu4HI GCNGC 4 cut(s) 339, 342, 1248, 1441
Fsp4HI GCNGC 4 cut(s) 339, 342, 1248, 1441
FspBI CTAG 1 cut(s) 492
GlaI GCGC 1 cut(s) 968
GluI GCNGC 4 cut(s) 339, 342, 1248, 1441
GsuI CTGGAG 2 cut(s) 627, 1223
HaeIII GGCC 5 cut(s) 666, 840, 912, 1190, 1395
HapII CCGG 1 cut(s) 515
HhaI GCGC 1 cut(s) 969
Hin1II CATG 6 cut(s) 135, 348, 643, 691, 923, 1307
Hin6I GCGC 1 cut(s) 967
HinP1I GCGC 1 cut(s) 967
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HinfI GANTC 8 cut(s) 57, 217, 323, 511, 560, 719, 1388, 1404
HpaII CCGG 1 cut(s) 515
HphI GGTGA 4 cut(s) 671, 1334, 1340, 1388
Hpy166II GTNNAC 2 cut(s) 1087, 1379
Hpy188I TCNGA 3 cut(s) 222, 1234, 1455
Hpy188III TCNNGA 6 cut(s) 21, 575, 680, 716, 755, 1240
Hpy8I GTNNAC 2 cut(s) 1087, 1379
HpyAV CCTTC 2 cut(s) 572, 636
HpyCH4III ACNGT 5 cut(s) 733, 764, 1322, 1370, 1427
HpyCH4IV ACGT 2 cut(s) 419, 1108
HpyCH4V TGCA 8 cut(s) 344, 476, 616, 1043, 1154, 1174, 1316, 1430
HpyF10VI GCNNNNNNNGC 4 cut(s) 347, 501, 900, 909
HpyF3I CTNAG 5 cut(s) 707, 1055, 1334, 1397, 1452
HpySE526I ACGT 2 cut(s) 419, 1108
Hsp92II CATG 6 cut(s) 135, 348, 643, 691, 923, 1307
HspAI GCGC 1 cut(s) 967
Kzo9I GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
LmnI GCTCC 2 cut(s) 628, 1448
Lsp1109I GCAGC 4 cut(s) 328, 350, 1259, 1427
LweI GCATC 7 cut(s) 23, 485, 516, 798, 1052, 1275, 1303
MaeI CTAG 1 cut(s) 492
MaeII ACGT 2 cut(s) 419, 1108
MaeIII GTNAC 5 cut(s) 467, 697, 1058, 1273, 1328
MalI GATC 8 cut(s) 28, 122, 181, 297, 753, 1053, 1080, 1236
MboI GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
MflI RGATCY 3 cut(s) 26, 295, 1234
MhlI GDGCHC 1 cut(s) 625
MlsI TGGCCA 1 cut(s) 1190
MluCI AATT 8 cut(s) 206, 246, 371, 611, 632, 1125, 1139, 1168
MluNI TGGCCA 1 cut(s) 1190
MlyI GAGTC 3 cut(s) 51, 505, 1397
Mox20I TGGCCA 1 cut(s) 1190
MroXI GAANNNNTTC 2 cut(s) 28, 600
MscI TGGCCA 1 cut(s) 1190
MseI TTAA 8 cut(s) 587, 741, 789, 1095, 1113, 1143, 1212, 1421
Msp20I TGGCCA 1 cut(s) 1190
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 1 cut(s) 515
MspR9I CCNGG 2 cut(s) 516, 606
Mva1269I GAATGC 1 cut(s) 711
MvaI CCWGG 1 cut(s) 606
MwoI GCNNNNNNNGC 4 cut(s) 347, 501, 900, 909
NciI CCSGG 1 cut(s) 516
NdeII GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
NlaIII CATG 6 cut(s) 135, 348, 643, 691, 923, 1307
NlaIV GGNNCC 4 cut(s) 187, 297, 363, 1006
NmeAIII GCCGAG 1 cut(s) 39
NmuCI GTSAC 3 cut(s) 697, 1058, 1328
NspI RCATGY 1 cut(s) 691
NspV TTCGAA 1 cut(s) 484
PaeR7I CTCGAG 1 cut(s) 878
PceI AGGCCT 2 cut(s) 912, 1395
PciI ACATGT 1 cut(s) 687
PcsI WCGNNNNNNNCGW 2 cut(s) 107, 116
PctI GAATGC 1 cut(s) 711
PdmI GAANNNNTTC 2 cut(s) 28, 600
PfeI GAWTC 5 cut(s) 217, 323, 560, 719, 1404
PflMI CCANNNNNTGG 1 cut(s) 134
PfoI TCCNGGA 1 cut(s) 604
PkrI GCNGC 4 cut(s) 340, 343, 1249, 1442
PleI GAGTC 3 cut(s) 51, 505, 1396
PpsI GAGTC 3 cut(s) 51, 505, 1396
Ppu21I YACGTR 1 cut(s) 420
PpuMI RGGWCCY 1 cut(s) 361
PscI ACATGT 1 cut(s) 687
Psp5II RGGWCCY 1 cut(s) 361
Psp6I CCWGG 1 cut(s) 604
PspEI GGTNACC 1 cut(s) 1328
PspGI CCWGG 1 cut(s) 604
PspN4I GGNNCC 4 cut(s) 187, 297, 363, 1006
PspPI GGNCC 1 cut(s) 361
PspPPI RGGWCCY 1 cut(s) 361
PspXI VCTCGAGB 1 cut(s) 878
PsrI GAACNNNNNNTAC 2 cut(s) 169, 201
PsuI RGATCY 3 cut(s) 26, 295, 1234
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 4 cut(s) 164, 448, 686, 884
RsaNI GTAC 4 cut(s) 163, 447, 685, 883
SaqAI TTAA 8 cut(s) 587, 741, 789, 1095, 1113, 1143, 1212, 1421
SatI GCNGC 4 cut(s) 339, 342, 1248, 1441
Sau3AI GATC 8 cut(s) 26, 120, 179, 295, 751, 1051, 1078, 1234
Sau96I GGNCC 1 cut(s) 361
ScaI AGTACT 1 cut(s) 884
SchI GAGTC 3 cut(s) 51, 505, 1397
ScrFI CCNGG 2 cut(s) 516, 606
SduI GDGCHC 1 cut(s) 625
SfaNI GCATC 7 cut(s) 23, 485, 516, 798, 1052, 1275, 1303
SfcI CTRYAG 1 cut(s) 1383
Sfr274I CTCGAG 1 cut(s) 878
SfuI TTCGAA 1 cut(s) 484
SinI GGWCC 1 cut(s) 361
SlaI CTCGAG 1 cut(s) 878
SmlI CTYRAG 2 cut(s) 878, 914
SmoI CTYRAG 2 cut(s) 878, 914
SnaBI TACGTA 1 cut(s) 420
Sse9I AATT 8 cut(s) 206, 246, 371, 611, 632, 1125, 1139, 1168
SseBI AGGCCT 2 cut(s) 912, 1395
SsiI CCGC 1 cut(s) 495
SspMI CTAG 1 cut(s) 492
StuI AGGCCT 2 cut(s) 912, 1395
StyD4I CCNGG 2 cut(s) 514, 604
StyI CCWWGG 2 cut(s) 291, 1035
TaaI ACNGT 5 cut(s) 733, 764, 1322, 1370, 1427
TaiI ACGT 2 cut(s) 422, 1111
TaqI TCGA 8 cut(s) 119, 354, 484, 574, 648, 722, 750, 879
TasI AATT 8 cut(s) 206, 246, 371, 611, 632, 1125, 1139, 1168
TatI WGTACW 3 cut(s) 162, 684, 882
TfiI GAWTC 5 cut(s) 217, 323, 560, 719, 1404
Tru1I TTAA 8 cut(s) 587, 741, 789, 1095, 1113, 1143, 1212, 1421
Tru9I TTAA 8 cut(s) 587, 741, 789, 1095, 1113, 1143, 1212, 1421
TscAI CASTG 3 cut(s) 658, 769, 1063
TseFI GTSAC 3 cut(s) 697, 1058, 1328
TseI GCWGC 4 cut(s) 338, 341, 1247, 1440
Tsp45I GTSAC 3 cut(s) 697, 1058, 1328
TspDTI ATGAA 4 cut(s) 438, 628, 663, 936
TspRI CASTG 3 cut(s) 658, 769, 1063
Van91I CCANNNNNTGG 1 cut(s) 134
VpaK11BI GGWCC 1 cut(s) 361
XapI RAATTY 4 cut(s) 206, 632, 1139, 1168
XceI RCATGY 1 cut(s) 691
XhoI CTCGAG 1 cut(s) 878
XmnI GAANNNNTTC 2 cut(s) 28, 600
XspI CTAG 1 cut(s) 492
ZrmI AGTACT 1 cut(s) 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.