RchiOBHm_Chr2g0091721
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000505
Physical Location & Seq
Forward (+)
5401350 .. 5406282
4933 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46689

Sequence Viewer

Length: 1545 bp
ATGATCAAGGAACTAGAAAATGAATCTTCTTCGTCTTCTTCAAGAGCAGTGTGGACCCCTCAGAGTCCCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTACTAGTCCTCCACGGCCTGATCATTCTCAAGGTGAGAAAATCCAGTGTGGTTCTCCTGTTAATCGACAGCCACTCTATTCTTCAGCTTCTCCTTCTCAAGTTTCCCCGACTTCTTCTTATCAGAGCCATTCCTCTCCTACTATTACTGATGCATCATTTTATTCCAGTTCTCAGCCTCAGGATGAGACTCCCAACCCATCCCCCGGGACAGTGTGCAATGGACAATCACCCTATTCCTTCCCTTCTCTCTATCAAATCCTATCTGCTCCTTTTAATACTCTTAGACAACTCTATGAGTGGTTCCGAGGTGAGACTGTCACTCACTCCCCAGTTCTTTACCATCCTGGAGACCATGGACCAGCACACTTAGAAGCTCTGGGAGAACTCGATTTCAGAAAGCAATTTCTGATTTTGAGTTATGCTGGAGGAACGAAGTTAAAAGATGTAATAGAAGCGGAGGCTATCAGGAGCTGGAAAAGTTTGCCAATGGTAAAGTTCGAGACCACAGTTTGGCATGCTTTGGGTGAAAACAATGTTGGCAAGGCTGACCGACCATTGTATTCTGATTGGGATTCTCAAAGAACACACCAGTACTATTGTTATGTTTCGGTGGATGGGAGTTACAGGTTCAAGGGTCCCTTCCTAGAGAAACCAAGAACTCTCCTGCAGAAACAGTTAGGAGATGACAATGTTTTGGAGGTGAAATTTACCCCAGGGGAATGTTCCAGTGGTACATATAGCAAGTTAATGCGAGAAGGCATCCTTGTTGGTTTGCGGCGATATGCTTTCTTTGTGTTCCGTGCTGGTAACAAAGGAAAGAATATGTGGAAAGACCCAACTTCATCACCTGTGAAATGTTACTTCGTTCGTGGGAGCTCTGATGCAGTGATAGACAGGGGTATAGGCTATAAGTTATCTGGCAAAACGATGCATGAAGGAAGATCTCTTTTCACGCATGCACACACTCGGCCTAGTTTGGCCAGCTACATGGATAGGTTATCTCTCATTTTGTCCAAGACAGTTACTTTAGAAATAAATTGGTCACATGTCAAGGTGGAATTCATCAAAGACAGACTGTCGCATGGAAAACCTCGCATACATACTGATGGGACAGGATTTATATCTGAGGATCTGGCTTTACTTTGTCCTGAGATAGCACGCAAAGGAGAGCAGATCAATAGTGAACACATCGAGGGACTTGATGATCCTGATGGTGAACTTGAGGACAAAATTCTGGAATGGAAACAGCCAGGCACTAGAACTCGGGAACTGCCTTTGCTCATGCAGTTCCGACTTTTTTACGAAGGCCGTGCTATCAAAGGAACTTTTCTTGTCAATAAAGAGTTAATAATGAATGAGTGCATGCGAGAGATGGAGGTAGGGGGAGCTGTTAACTCTCTCTATGTGTTCAACTGGAAGTTATTCATATCATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

514

Amino Acids

57.71

Weight (kDa)

7.24

Isoelectric Point (pI)

49.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RdRP_helical PF26252 158 - 220 6.2e-08 RNA dependent RNA polymerase, helical domain
RdRP PF05183 244 - 488 6.1e-19 RNA dependent RNA polymerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 618
AciI CCGC 2 cut(s) 563, 883
AclWI GGATC 2 cut(s) 1245, 1307
AcoI YGGCCR 1 cut(s) 1086
AcsI RAATTY 3 cut(s) 812, 1166, 1338
AcuI CTGAAG 1 cut(s) 174
AfaI GTAC 2 cut(s) 701, 841
AfiI CCNNNNNNNGG 2 cut(s) 311, 618
AflIII ACRYGT 1 cut(s) 1153
AgsI TTSAA 3 cut(s) 42, 739, 1519
AhdI GACNNNNNGTC 1 cut(s) 1183
AhlI ACTAGT 1 cut(s) 110
AjnI CCWGG 3 cut(s) 451, 820, 1357
AjuI GAANNNNNNNTTGG 2 cut(s) 627, 659
AluBI AGCT 6 cut(s) 194, 482, 579, 984, 1092, 1496
AluI AGCT 6 cut(s) 194, 482, 579, 984, 1092, 1496
Alw21I GWGCWC 1 cut(s) 986
Alw26I GTCTC 4 cut(s) 287, 413, 450, 602
AlwI GGATC 2 cut(s) 1245, 1307
AlwNI CAGNNNCTG 1 cut(s) 579
Ama87I CYCGRG 2 cut(s) 311, 1371
AoxI GGCC 4 cut(s) 122, 1076, 1086, 1414
ApoI RAATTY 3 cut(s) 812, 1166, 1338
Asp700I GAANNNNTTC 1 cut(s) 1529
AspS9I GGNCC 3 cut(s) 54, 464, 743
AsuC2I CCSGG 2 cut(s) 312, 313
AsuHPI GGTGA 7 cut(s) 152, 327, 428, 644, 820, 945, 1334
AvaI CYCGRG 2 cut(s) 311, 1371
AvaII GGWCC 3 cut(s) 54, 464, 743
AxyI CCTNAGG 1 cut(s) 285
BalI TGGCCA 1 cut(s) 1088
BanII GRGCYC 1 cut(s) 986
BbsI GAAGAC 1 cut(s) 27
Bbv12I GWGCWC 1 cut(s) 986
BccI CCATC 6 cut(s) 313, 456, 716, 1208, 1313, 1474
BceAI ACGGC 2 cut(s) 137, 1401
BcgI CGANNNNNNTGC 2 cut(s) 1400, 1434
BciT130I CCWGG 3 cut(s) 453, 822, 1359
BclI TGATCA 2 cut(s) 3, 127
BcnI CCSGG 2 cut(s) 312, 313
BcoDI GTCTC 4 cut(s) 287, 413, 450, 602
BcuI ACTAGT 1 cut(s) 110
BfaI CTAG 5 cut(s) 14, 111, 752, 1080, 1365
BfmI CTRYAG 1 cut(s) 773
BglII AGATCT 1 cut(s) 1049
BisI GCNGC 1 cut(s) 884
BlsI GCNGC 1 cut(s) 885
BmcAI AGTACT 1 cut(s) 701
Bme1390I CCNGG 5 cut(s) 312, 313, 453, 822, 1359
Bme18I GGWCC 3 cut(s) 54, 464, 743
BmeRI GACNNNNNGTC 1 cut(s) 1183
BmeT110I CYCGRG 2 cut(s) 311, 1371
BmgT120I GGNCC 3 cut(s) 54, 464, 743
BmiI GGNNCC 4 cut(s) 56, 410, 744, 745
BmrFI CCNGG 5 cut(s) 312, 313, 453, 822, 1359
BmrI ACTGGG 1 cut(s) 431
BmsI GCATC 5 cut(s) 247, 269, 876, 979, 1026
BmuI ACTGGG 1 cut(s) 431
BpiI GAAGAC 1 cut(s) 27
BpmI CTGGAG 2 cut(s) 474, 552
BpuEI CTTGAG 3 cut(s) 120, 189, 1349
BpuMI CCSGG 2 cut(s) 312, 313
BsaBI GATNNNNATC 1 cut(s) 1228
BsaI GGTCTC 2 cut(s) 450, 602
BsaJI CCNNGG 7 cut(s) 119, 310, 311, 412, 460, 820, 821
BsaXI ACNNNNNCTCC 2 cut(s) 100, 130
Bsc4I CCNNNNNNNGG 2 cut(s) 311, 618
Bse1I ACTGG 6 cut(s) 151, 273, 437, 697, 834, 1526
Bse21I CCTNAGG 1 cut(s) 285
Bse3DI GCAATG 1 cut(s) 331
Bse8I GATNNNNATC 1 cut(s) 1228
BseBI CCWGG 3 cut(s) 453, 822, 1359
BseDI CCNNGG 7 cut(s) 119, 310, 311, 412, 460, 820, 821
BseGI GGATG 5 cut(s) 295, 305, 448, 727, 867
BseJI GATNNNNATC 1 cut(s) 1228
BseLI CCNNNNNNNGG 2 cut(s) 311, 618
BseMI GCAATG 1 cut(s) 331
BseMII CTCAG 5 cut(s) 74, 293, 299, 1224, 1248
BseNI ACTGG 6 cut(s) 151, 273, 437, 697, 834, 1526
BshFI GGCC 4 cut(s) 124, 1078, 1088, 1416
BsiHKAI GWGCWC 1 cut(s) 986
BsiHKCI CYCGRG 2 cut(s) 311, 1371
BsiSI CCGG 1 cut(s) 312
BslFI GGGAC 5 cut(s) 51, 328, 729, 1231, 1317
BslI CCNNNNNNNGG 2 cut(s) 311, 618
BsmAI GTCTC 4 cut(s) 287, 413, 450, 602
BsmFI GGGAC 5 cut(s) 51, 328, 729, 1231, 1317
BsnI GGCC 4 cut(s) 124, 1078, 1088, 1416
Bso31I GGTCTC 2 cut(s) 450, 602
BsoBI CYCGRG 2 cut(s) 311, 1371
Bsp1286I GDGCHC 1 cut(s) 986
Bsp143I GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
Bsp19I CCATGG 1 cut(s) 460
BspACI CCGC 2 cut(s) 563, 883
BspANI GGCC 4 cut(s) 124, 1078, 1088, 1416
BspCNI CTCAG 5 cut(s) 73, 292, 298, 1225, 1249
BspLI GGNNCC 4 cut(s) 56, 410, 744, 745
BspMAI CTGCAG 1 cut(s) 777
BspPI GGATC 2 cut(s) 1245, 1307
BspTNI GGTCTC 2 cut(s) 450, 602
BsrDI GCAATG 1 cut(s) 331
BsrI ACTGG 6 cut(s) 151, 273, 437, 697, 834, 1526
BssECI CCNNGG 7 cut(s) 119, 310, 311, 412, 460, 820, 821
BssMI GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
BssT1I CCWWGG 1 cut(s) 460
Bst2UI CCWGG 3 cut(s) 453, 822, 1359
Bst4CI ACNGT 6 cut(s) 319, 424, 616, 783, 1129, 1185
BstC8I GCNNGC 5 cut(s) 624, 1065, 1090, 1267, 1472
BstDEI CTNAG 7 cut(s) 60, 279, 285, 389, 475, 1233, 1257
BstDSI CCRYGG 2 cut(s) 119, 460
BstF5I GGATG 5 cut(s) 295, 305, 448, 727, 867
BstKTI GATC 6 cut(s) 6, 130, 1052, 1240, 1284, 1315
BstMAI GTCTC 4 cut(s) 287, 413, 450, 602
BstMBI GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
BstNI CCWGG 3 cut(s) 453, 822, 1359
BstNSI RCATGY 4 cut(s) 626, 1067, 1157, 1474
BstSCI CCNGG 5 cut(s) 310, 311, 451, 820, 1357
BstSFI CTRYAG 1 cut(s) 773
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 2 cut(s) 1049, 1237
BstXI CCANNNNNNTGG 1 cut(s) 1096
BstYI RGATCY 2 cut(s) 1049, 1237
Bsu36I CCTNAGG 1 cut(s) 285
BsuRI GGCC 4 cut(s) 124, 1078, 1088, 1416
BtgI CCRYGG 2 cut(s) 119, 460
BtsCI GGATG 5 cut(s) 295, 305, 448, 727, 867
BtsI GCAGTG 2 cut(s) 54, 999
BtsIMutI CAGTG 5 cut(s) 54, 158, 324, 841, 999
Cac8I GCNNGC 5 cut(s) 624, 1065, 1090, 1267, 1472
CaiI CAGNNNCTG 1 cut(s) 579
Cfr13I GGNCC 3 cut(s) 54, 464, 743
Cfr9I CCCGGG 1 cut(s) 311
Csp6I GTAC 2 cut(s) 700, 840
CviAII CATG 9 cut(s) 461, 623, 1040, 1064, 1096, 1154, 1190, 1390, 1471
CviQI GTAC 2 cut(s) 700, 840
DdeI CTNAG 7 cut(s) 60, 279, 285, 389, 475, 1233, 1257
DpnI GATC 6 cut(s) 5, 129, 1051, 1239, 1283, 1314
DpnII GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
DriI GACNNNNNGTC 1 cut(s) 1183
EaeI YGGCCR 1 cut(s) 1086
Eam1105I GACNNNNNGTC 1 cut(s) 1183
Ecl136II GAGCTC 1 cut(s) 984
Eco130I CCWWGG 1 cut(s) 460
Eco24I GRGCYC 1 cut(s) 986
Eco31I GGTCTC 2 cut(s) 450, 602
Eco47I GGWCC 3 cut(s) 54, 464, 743
Eco53kI GAGCTC 1 cut(s) 984
Eco57I CTGAAG 1 cut(s) 174
Eco81I CCTNAGG 1 cut(s) 285
Eco88I CYCGRG 2 cut(s) 311, 1371
EcoICRI GAGCTC 1 cut(s) 984
EcoO109I RGGNCCY 1 cut(s) 743
EcoRI GAATTC 1 cut(s) 1166
EcoRII CCWGG 3 cut(s) 451, 820, 1357
EcoT14I CCWWGG 1 cut(s) 460
EcoT22I ATGCAT 2 cut(s) 262, 1041
EcoT38I GRGCYC 1 cut(s) 986
ErhI CCWWGG 1 cut(s) 460
FaeI CATG 9 cut(s) 464, 626, 1043, 1067, 1099, 1157, 1193, 1393, 1474
FalI AAGNNNNNCTT 4 cut(s) 731, 763, 855, 887
FaqI GGGAC 5 cut(s) 51, 328, 729, 1231, 1317
FatI CATG 9 cut(s) 460, 622, 1039, 1063, 1095, 1153, 1189, 1389, 1470
FbaI TGATCA 2 cut(s) 3, 127
Fnu4HI GCNGC 1 cut(s) 884
FokI GGATG 5 cut(s) 292, 302, 435, 734, 854
FriOI GRGCYC 1 cut(s) 986
Fsp4HI GCNGC 1 cut(s) 884
FspBI CTAG 5 cut(s) 14, 111, 752, 1080, 1365
GluI GCNGC 1 cut(s) 884
GsuI CTGGAG 2 cut(s) 474, 552
HaeIII GGCC 4 cut(s) 124, 1078, 1088, 1416
HapII CCGG 1 cut(s) 312
Hin1II CATG 9 cut(s) 464, 626, 1043, 1067, 1099, 1157, 1193, 1393, 1474
HincII GTYRAC 1 cut(s) 1501
HindII GTYRAC 1 cut(s) 1501
HinfI GANTC 4 cut(s) 23, 64, 295, 680
HpaI GTTAAC 1 cut(s) 1501
HpaII CCGG 1 cut(s) 312
HphI GGTGA 7 cut(s) 152, 327, 428, 644, 820, 945, 1334
Hpy166II GTNNAC 4 cut(s) 54, 1292, 1325, 1501
Hpy188I TCNGA 9 cut(s) 63, 231, 413, 503, 516, 673, 988, 1234, 1400
Hpy188III TCNNGA 8 cut(s) 42, 287, 574, 607, 1256, 1316, 1343, 1373
Hpy8I GTNNAC 4 cut(s) 54, 1292, 1325, 1501
HpyAV CCTTC 7 cut(s) 210, 355, 360, 757, 857, 1037, 1406
HpyCH4III ACNGT 6 cut(s) 319, 424, 616, 783, 1129, 1185
HpyCH4V TGCA 8 cut(s) 260, 324, 775, 992, 1039, 1067, 1393, 1470
HpyF3I CTNAG 7 cut(s) 60, 279, 285, 389, 475, 1233, 1257
Hsp92II CATG 9 cut(s) 464, 626, 1043, 1067, 1099, 1157, 1193, 1393, 1474
KflI GGGWCCC 1 cut(s) 743
Ksp22I TGATCA 2 cut(s) 3, 127
KspAI GTTAAC 1 cut(s) 1501
Kzo9I GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
LmnI GCTCC 4 cut(s) 379, 576, 981, 1493
LweI GCATC 5 cut(s) 247, 269, 876, 979, 1026
MaeI CTAG 5 cut(s) 14, 111, 752, 1080, 1365
MaeIII GTNAC 6 cut(s) 424, 728, 914, 965, 1129, 1149
MalI GATC 6 cut(s) 5, 129, 1051, 1239, 1283, 1314
MboI GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
MflI RGATCY 2 cut(s) 1049, 1237
MhlI GDGCHC 1 cut(s) 986
MlsI TGGCCA 1 cut(s) 1088
MluCI AATT 5 cut(s) 509, 812, 1144, 1166, 1338
MluNI TGGCCA 1 cut(s) 1088
MlyI GAGTC 2 cut(s) 73, 289
MmeI TCCRAC 1 cut(s) 1423
Mox20I TGGCCA 1 cut(s) 1088
Mph1103I ATGCAT 2 cut(s) 262, 1041
MroXI GAANNNNTTC 1 cut(s) 1529
MscI TGGCCA 1 cut(s) 1088
MseI TTAA 7 cut(s) 168, 381, 545, 854, 1454, 1500, 1543
MslI CAYNNNNRTG 1 cut(s) 1212
Msp20I TGGCCA 1 cut(s) 1088
MspI CCGG 1 cut(s) 312
MspR9I CCNGG 5 cut(s) 312, 313, 453, 822, 1359
MvaI CCWGG 3 cut(s) 453, 822, 1359
NciI CCSGG 2 cut(s) 312, 313
NcoI CCATGG 1 cut(s) 460
NdeII GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
NlaIII CATG 9 cut(s) 464, 626, 1043, 1067, 1099, 1157, 1193, 1393, 1474
NlaIV GGNNCC 4 cut(s) 56, 410, 744, 745
NmeAIII GCCGAG 1 cut(s) 1054
NmuCI GTSAC 2 cut(s) 424, 1149
NsiI ATGCAT 2 cut(s) 262, 1041
NspI RCATGY 4 cut(s) 626, 1067, 1157, 1474
PaeI GCATGC 3 cut(s) 626, 1067, 1474
PasI CCCWGGG 1 cut(s) 821
PciI ACATGT 1 cut(s) 1153
PdmI GAANNNNTTC 1 cut(s) 1529
PfeI GAWTC 2 cut(s) 23, 680
PflMI CCANNNNNTGG 1 cut(s) 618
PfoI TCCNGGA 1 cut(s) 451
PkrI GCNGC 1 cut(s) 885
PleI GAGTC 2 cut(s) 72, 289
PpsI GAGTC 2 cut(s) 72, 289
PpuMI RGGWCCY 1 cut(s) 743
PscI ACATGT 1 cut(s) 1153
Psp124BI GAGCTC 1 cut(s) 986
Psp5II RGGWCCY 1 cut(s) 743
Psp6I CCWGG 3 cut(s) 451, 820, 1357
PspGI CCWGG 3 cut(s) 451, 820, 1357
PspN4I GGNNCC 4 cut(s) 56, 410, 744, 745
PspPI GGNCC 3 cut(s) 54, 464, 743
PspPPI RGGWCCY 1 cut(s) 743
PstI CTGCAG 1 cut(s) 777
PstNI CAGNNNCTG 1 cut(s) 579
PsuI RGATCY 2 cut(s) 1049, 1237
RsaI GTAC 2 cut(s) 701, 841
RsaNI GTAC 2 cut(s) 700, 840
RseI CAYNNNNRTG 1 cut(s) 1212
SacI GAGCTC 1 cut(s) 986
SaqAI TTAA 7 cut(s) 168, 381, 545, 854, 1454, 1500, 1543
SatI GCNGC 1 cut(s) 884
Sau3AI GATC 6 cut(s) 3, 127, 1049, 1237, 1281, 1312
Sau96I GGNCC 3 cut(s) 54, 464, 743
ScaI AGTACT 1 cut(s) 701
SchI GAGTC 2 cut(s) 73, 289
ScrFI CCNGG 5 cut(s) 312, 313, 453, 822, 1359
SduI GDGCHC 1 cut(s) 986
SfaNI GCATC 5 cut(s) 247, 269, 876, 979, 1026
SfcI CTRYAG 1 cut(s) 773
SinI GGWCC 3 cut(s) 54, 464, 743
SmaI CCCGGG 1 cut(s) 313
SmiMI CAYNNNNRTG 1 cut(s) 1212
SmlI CTYRAG 3 cut(s) 135, 204, 1328
SmoI CTYRAG 3 cut(s) 135, 204, 1328
SpeI ACTAGT 1 cut(s) 110
SphI GCATGC 3 cut(s) 626, 1067, 1474
Sse9I AATT 5 cut(s) 509, 812, 1144, 1166, 1338
SsiI CCGC 2 cut(s) 563, 883
SspMI CTAG 5 cut(s) 14, 111, 752, 1080, 1365
SstI GAGCTC 1 cut(s) 986
StyD4I CCNGG 5 cut(s) 310, 311, 451, 820, 1357
StyI CCWWGG 1 cut(s) 460
TaaI ACNGT 6 cut(s) 319, 424, 616, 783, 1129, 1185
TaqI TCGA 4 cut(s) 172, 495, 606, 1299
TaqII GACCGA 1 cut(s) 672
TasI AATT 5 cut(s) 509, 812, 1144, 1166, 1338
TatI WGTACW 1 cut(s) 699
TauI GCSGC 1 cut(s) 886
TfiI GAWTC 2 cut(s) 23, 680
Tru1I TTAA 7 cut(s) 168, 381, 545, 854, 1454, 1500, 1543
Tru9I TTAA 7 cut(s) 168, 381, 545, 854, 1454, 1500, 1543
TscAI CASTG 5 cut(s) 54, 158, 324, 841, 999
TseFI GTSAC 2 cut(s) 424, 1149
Tsp45I GTSAC 2 cut(s) 424, 1149
TspDTI ATGAA 7 cut(s) 36, 93, 939, 1056, 1159, 1475, 1522
TspGWI ACGGA 1 cut(s) 896
TspMI CCCGGG 1 cut(s) 311
TspRI CASTG 5 cut(s) 54, 158, 324, 841, 999
Van91I CCANNNNNTGG 1 cut(s) 618
VpaK11BI GGWCC 3 cut(s) 54, 464, 743
XapI RAATTY 3 cut(s) 812, 1166, 1338
XceI RCATGY 4 cut(s) 626, 1067, 1157, 1474
XmaI CCCGGG 1 cut(s) 311
XmnI GAANNNNTTC 1 cut(s) 1529
XspI CTAG 5 cut(s) 14, 111, 752, 1080, 1365
ZrmI AGTACT 1 cut(s) 701
Zsp2I ATGCAT 2 cut(s) 262, 1041
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.