Rorug02G0020100
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000505
Physical Location & Seq
Reverse (-)
1625654 .. 1632009
6356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0020100.1

Sequence Viewer

Length: 1746 bp
ATGATGGGGGGTATTTGCTCGAGAAAGAGAGACCAACCGGTCATTGAAGAAGGCGGTGTTAGTAGAGTAGTGTCTGGAAGATATTGTAAAAGTAGCAGTTCAAAATGGCTAGGAACTTCATTTTTTCGTTCCACTGTAGAACAGTCTCCAGGAGTAGCAGGCATTTGCCCATCTCTCTTGGAATTATGCATTTCCAAAATATGCCGGGACATTGACAAATACAGTTCGCTTTCGCTGCTGCCTAGGGATGTGAGTCAGCAAATCTTTAATGAATTGGTCTGTTCCCAATCTCTCACTCATGATTCTCTCCAGGCTTTTAGAGATTGTGCTCTTGAGGATGTTGGTTTGGGCGAATACCCTTCTGTGAATGATAGTTGGATGGATGTCATCTGTTCACAAGGTTCATCTCTACTATCTGTTGATCTTTCTGGTTCCGAGGTGACAGATGCTGGATTGGCTCTTCTAAAAGACTGCTCGAACCTCCAATCATTAACTTATAATTACTGTGACCATGTTTCAGAACATGGACTTGAGCACATCAGTGGTCTTTCAAATTTGAAATGCTTGAGTTTTAAAAGGAGCAGTGCAATTAGTGCTGAAGGGATGCACACTTTCTCCAGCCTTTTTAACTTAGAAAAGTTGGACTTGGAGAGGTGTCCAGAGATTCATGGTGGCTTTGTTCATCTTAAAGGTTTGACGAAACTAAAGTCTCTTAATGTTAGATGTTGTAAATGCGTCACAGATTCAGATTTAAAGGCCATCTCAGGGCTTACAAACCTCAATGAATTACAGATATCTAACTGCAACATTACTGATTCTGGAATCTCTTATTTGAAAGGCTTGCAGAAGCTTAATATGTTGAACTTAGAGGGATGCAATGTTACTTCTGCATGTTTGGAATCTATTTCAGCTCTTGTTGCCCTGGCTTACTTAAATCTCAACAGATGCAGTTTATCTGATGAAGGATGTGATAAGTTTTCTGGCCTTACAAACTTGAAGGTTTTGAGCTTGGGATTCAACAGTATCACAGATGCATGTTTGGTGCATCTAAAAGGTTTGACAAATTTGGAGAGCTTGAACCTGGATTCTTGTAAGATAGGTGACGAGGGGCTTGCAAACTTGGCAGGGTTTGTACTCATGAAGAATTTGGAGTTGTCTGATACTGAAGTTGGAAGCAATGGGATTCGTCATCTCTCAGGGTTAAAGAATCTGGAGAAATTAAACTTGTCGTTCACCCTGGTAACTGACAGTAGTCTGAAAAAGTTATCCGGACTGACATCTCTCAAATCACTTAATCTGGATGCTCGCCAAATTACTGATGCTGGACTTGCAGCTATTACAGGTCTTACAAAATTGACACATCTGGATCTCTTTGGCGCTCGGATTTCAGACTCTGGAGCAAACTCTTTAAAACACTTCAAGAACCTTCAATCTCTTGAAATATGTGGTGGAGGATTGACTGATGCTGGTGTGAAGAATCTCAAAGATCTTGTCTGTCTGACATGGCTAAATTTGTCGCAGAACTGCAACTTGACTGATAAATCCTTGGAAGTGATTTCTGGTTTGACTGCATTGGTGTCCTTAAACATTTCAAATTCACGCATTACCAATGAGGGATTGCAGTATTTAAAGCCTTTGAAGAATCTACGTTCCTTAACCTTGGAGTCCAGTAAGGTGACAGCATCTGAAATCAGGAAGCTACAGTTTGCTGCCCTCCCTAATCTTGTAAGTTTTCGACCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

581

Amino Acids

62.68

Weight (kDa)

6.16

Isoelectric Point (pI)

37.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 230 - 293 2.8e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 275 - 436 5.7e-08 Leucine-rich repeat region
LRR_8 PF13855 308 - 366 8.6e-08 Leucine rich repeat
DUF7885 PF25372 409 - 472 3.5e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 419 - 570 6.5e-08 Leucine-rich repeat region
LRR_8 PF13855 475 - 535 1.3e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G19910 AT2G19910 AT2G19920 AT2G19920 AT2G19920 AT2G19920 AT2G19930 AT2G19930 AT2G19930
fragaria_vesca FvH4_1g05980 FvH4_1g05990 FvH4_1g05990 FvH4_1g09718
malus_domestica MD02G1064400.v1.1 MD15G1195300.v1.1 MD15G1195400.v1.1
prunus_persica Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1 Prupe.7G221200_v2.0.a1
pyrus_communis pycom02g05070 pycom15g17460
rosa_chinensis RchiOBHm_Chr2g0091671 RchiOBHm_Chr2g0091681 RchiOBHm_Chr2g0091691 RchiOBHm_Chr2g0091701 RchiOBHm_Chr2g0091711 RchiOBHm_Chr2g0091721 RchiOBHm_Chr2g0091731 RchiOBHm_Chr5g0014401
rosa_laevigata RLG00000013772 RLG00000016242 RLG00000016244 RLG00000016245 RLG00000016246 RLG00000032105
rosa_multiflora Rmu_co8374041.1_g000001 Rmu_co8478121.1_g000001 Rmu_sc0000897.1_g000005 Rmu_sc0000897.1_g000009
rosa_roxburghii Rroxscaffold_1G00062180 Rroxscaffold_1G00062190 Rroxscaffold_1G00068800 Rroxscaffold_2G00149790 Rroxscaffold_2G00149800 Rroxscaffold_2G00149810
rosa_rugosa Rorug02G0019600 Rorug02G0019700 Rorug02G0019800 Rorug02G0019900 Rorug02G0019900 Rorug02G0020000 Rorug02G0020000 Rorug02G0020100 Rorug02G0020100 Rorug02G0020200 Rorug05G0017800
rosa_samantha Rh2AG064700 Rh2AG064800 Rh2AG064900 Rh2BG063800 Rh2BG063900 Rh2BG064000 Rh2BG064100 Rh2CG065500 Rh2CG065600 Rh2CG065700 Rh2DG063900 Rh2DG064000 Rh2DG064100 Rh2DG064200 Rh2DG381700 Rh5AG056700 Rh5AG056800 Rh5AG056900 Rh5AG112600 Rh5BG109300 Rh5CG063800 Rh5CG121100 Rh5DG053100 Rh5DG108300 Rh6CG100100
rosa_wichuraiana Rw2G005560 Rw2G005580 Rw2G005590 Rw5G005370 Rw5G009770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 498
AasI GACNNNNNNGTC 1 cut(s) 38
AccIII TCCGGA 1 cut(s) 1268
AciI CCGC 1 cut(s) 54
AclWI GGATC 1 cut(s) 1374
AcsI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
AcuI CTGAAG 2 cut(s) 618, 1185
AfaI GTAC 1 cut(s) 1134
AfiI CCNNNNNNNGG 1 cut(s) 765
AgeI ACCGGT 1 cut(s) 37
AjnI CCWGG 5 cut(s) 148, 309, 921, 1080, 1236
AleI CACNNNNGTG 1 cut(s) 540
AluBI AGCT 6 cut(s) 850, 911, 1008, 1074, 1334, 1699
AluI AGCT 6 cut(s) 850, 911, 1008, 1074, 1334, 1699
Alw21I GWGCWC 2 cut(s) 331, 537
Alw26I GTCTC 3 cut(s) 24, 150, 714
AlwI GGATC 1 cut(s) 1374
AlwNI CAGNNNCTG 3 cut(s) 449, 1394, 1685
Ama87I CYCGRG 1 cut(s) 19
Aor13HI TCCGGA 1 cut(s) 1268
AoxI GGCC 2 cut(s) 756, 982
ApeKI GCWGC 4 cut(s) 235, 238, 1331, 1709
ApoI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
ArsI GACNNNNNNTTYG 4 cut(s) 692, 724, 1476, 1508
AsiGI ACCGGT 1 cut(s) 37
AspA2I CCTAGG 1 cut(s) 242
AspLEI GCGC 1 cut(s) 1379
AsuC2I CCSGG 1 cut(s) 206
AsuHPI GGTGA 4 cut(s) 451, 1112, 1225, 1687
AvaI CYCGRG 1 cut(s) 19
AvrII CCTAGG 1 cut(s) 242
BaeI ACNNNNGTAYC 2 cut(s) 1152, 1185
Bbv12I GWGCWC 2 cut(s) 331, 537
BbvI GCAGC 4 cut(s) 222, 225, 1343, 1696
BccI CCATC 3 cut(s) 178, 373, 767
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 5 cut(s) 150, 311, 923, 1082, 1238
BcnI CCSGG 1 cut(s) 206
BcoDI GTCTC 3 cut(s) 24, 150, 714
BfaI CTAG 2 cut(s) 110, 243
BfmI CTRYAG 2 cut(s) 135, 1700
BfoI RGCGCY 1 cut(s) 1380
BglII AGATCT 1 cut(s) 1486
BisI GCNGC 4 cut(s) 236, 239, 1332, 1710
BlnI CCTAGG 1 cut(s) 242
BlsI GCNGC 4 cut(s) 237, 240, 1333, 1711
Bme1390I CCNGG 6 cut(s) 150, 206, 311, 923, 1082, 1238
BmeT110I CYCGRG 1 cut(s) 19
BmiI GGNNCC 1 cut(s) 433
BmrFI CCNGG 6 cut(s) 150, 206, 311, 923, 1082, 1238
BoxI GACNNNNGTC 1 cut(s) 1251
BpmI CTGGAG 5 cut(s) 132, 293, 601, 1232, 1416
BpuEI CTTGAG 3 cut(s) 353, 551, 586
BpuMI CCSGG 1 cut(s) 206
BsaI GGTCTC 1 cut(s) 24
BsaJI CCNNGG 6 cut(s) 242, 435, 921, 1236, 1545, 1659
BsaWI WCCGGW 2 cut(s) 37, 1268
BsaXI ACNNNNNCTCC 2 cut(s) 599, 629
Bsc4I CCNNNNNNNGG 1 cut(s) 765
Bse118I RCCGGY 1 cut(s) 37
Bse1I ACTGG 1 cut(s) 1668
Bse3DI GCAATG 2 cut(s) 883, 1183
BseAI TCCGGA 1 cut(s) 1268
BseBI CCWGG 5 cut(s) 150, 311, 923, 1082, 1238
BseDI CCNNGG 6 cut(s) 242, 435, 921, 1236, 1545, 1659
BseGI GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BseLI CCNNNNNNNGG 1 cut(s) 765
BseMI GCAATG 2 cut(s) 883, 1183
BseMII CTCAG 2 cut(s) 777, 1209
BseNI ACTGG 1 cut(s) 1668
BseXI GCAGC 4 cut(s) 222, 225, 1343, 1696
BshFI GGCC 2 cut(s) 758, 984
BshTI ACCGGT 1 cut(s) 37
BsiHKAI GWGCWC 2 cut(s) 331, 537
BsiHKCI CYCGRG 1 cut(s) 19
BsiSI CCGG 3 cut(s) 38, 205, 1269
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 1 cut(s) 765
BsmAI GTCTC 3 cut(s) 24, 150, 714
BsmFI GGGAC 1 cut(s) 221
BsnI GGCC 2 cut(s) 758, 984
Bso31I GGTCTC 1 cut(s) 24
BsoBI CYCGRG 1 cut(s) 19
Bsp1286I GDGCHC 2 cut(s) 331, 537
Bsp13I TCCGGA 1 cut(s) 1268
Bsp143I GATC 3 cut(s) 421, 1366, 1486
BspACI CCGC 1 cut(s) 54
BspANI GGCC 2 cut(s) 758, 984
BspCNI CTCAG 2 cut(s) 776, 1208
BspEI TCCGGA 1 cut(s) 1268
BspHI TCATGA 2 cut(s) 298, 1137
BspLI GGNNCC 1 cut(s) 433
BspPI GGATC 1 cut(s) 1374
BspQI GCTCTTC 1 cut(s) 465
BspTNI GGTCTC 1 cut(s) 24
BsrDI GCAATG 2 cut(s) 883, 1183
BsrFI RCCGGY 1 cut(s) 37
BsrI ACTGG 1 cut(s) 1668
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 6 cut(s) 242, 435, 921, 1236, 1545, 1659
BssMI GATC 3 cut(s) 421, 1366, 1486
BssT1I CCWWGG 3 cut(s) 242, 1545, 1659
Bst2UI CCWGG 5 cut(s) 150, 311, 923, 1082, 1238
Bst4CI ACNGT 7 cut(s) 136, 144, 224, 506, 1022, 1250, 1704
Bst6I CTCTTC 1 cut(s) 465
BstAPI GCANNNNNTGC 1 cut(s) 593
BstC8I GCNNGC 4 cut(s) 160, 842, 1113, 1306
BstDEI CTNAG 4 cut(s) 631, 763, 865, 1195
BstF5I GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BstH2I RGCGCY 1 cut(s) 1380
BstHHI GCGC 1 cut(s) 1379
BstKTI GATC 3 cut(s) 424, 1369, 1489
BstMAI GTCTC 3 cut(s) 24, 150, 714
BstMBI GATC 3 cut(s) 421, 1366, 1486
BstMWI GCNNNNNNNGC 6 cut(s) 235, 455, 593, 917, 1121, 1328
BstNI CCWGG 5 cut(s) 150, 311, 923, 1082, 1238
BstNSI RCATGY 2 cut(s) 894, 1038
BstPAI GACNNNNGTC 1 cut(s) 1251
BstSCI CCNGG 6 cut(s) 148, 204, 309, 921, 1080, 1236
BstSFI CTRYAG 2 cut(s) 135, 1700
BstV1I GCAGC 4 cut(s) 222, 225, 1343, 1696
BstX2I RGATCY 2 cut(s) 1366, 1486
BstYI RGATCY 2 cut(s) 1366, 1486
BsuRI GGCC 2 cut(s) 758, 984
BtsCI GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 3 cut(s) 132, 547, 589
Cac8I GCNNGC 4 cut(s) 160, 842, 1113, 1306
CaiI CAGNNNCTG 3 cut(s) 449, 1394, 1685
CciI TCATGA 2 cut(s) 298, 1137
CfoI GCGC 1 cut(s) 1379
Cfr10I RCCGGY 1 cut(s) 37
CseI GACGC 1 cut(s) 724
Csp6I GTAC 1 cut(s) 1133
CspAI ACCGGT 1 cut(s) 37
CviAII CATG 8 cut(s) 299, 512, 524, 668, 891, 1035, 1138, 1503
CviQI GTAC 1 cut(s) 1133
DdeI CTNAG 4 cut(s) 631, 763, 865, 1195
DpnI GATC 3 cut(s) 423, 1368, 1488
DpnII GATC 3 cut(s) 421, 1366, 1486
DraI TTTAAA 4 cut(s) 574, 753, 1410, 1629
DrdI GACNNNNNNGTC 1 cut(s) 38
DseDI GACNNNNNNGTC 1 cut(s) 38
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Eco130I CCWWGG 3 cut(s) 242, 1545, 1659
Eco31I GGTCTC 1 cut(s) 24
Eco32I GATATC 1 cut(s) 795
Eco57I CTGAAG 2 cut(s) 618, 1185
Eco88I CYCGRG 1 cut(s) 19
EcoRII CCWGG 5 cut(s) 148, 309, 921, 1080, 1236
EcoRV GATATC 1 cut(s) 795
EcoT14I CCWWGG 3 cut(s) 242, 1545, 1659
EcoT22I ATGCAT 2 cut(s) 191, 1036
ErhI CCWWGG 3 cut(s) 242, 1545, 1659
FaeI CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1141, 1506
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 1 cut(s) 221
FatI CATG 8 cut(s) 298, 511, 523, 667, 890, 1034, 1137, 1502
Fnu4HI GCNGC 4 cut(s) 236, 239, 1332, 1710
FokI GGATG 8 cut(s) 260, 350, 391, 395, 616, 885, 978, 1313
Fsp4HI GCNGC 4 cut(s) 236, 239, 1332, 1710
FspBI CTAG 2 cut(s) 110, 243
GlaI GCGC 1 cut(s) 1378
GluI GCNGC 4 cut(s) 236, 239, 1332, 1710
GsuI CTGGAG 5 cut(s) 132, 293, 601, 1232, 1416
HaeII RGCGCY 1 cut(s) 1380
HaeIII GGCC 2 cut(s) 758, 984
HapII CCGG 3 cut(s) 38, 205, 1269
HgaI GACGC 1 cut(s) 724
HhaI GCGC 1 cut(s) 1379
Hin1II CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1141, 1506
Hin6I GCGC 1 cut(s) 1377
HinP1I GCGC 1 cut(s) 1377
HindIII AAGCTT 1 cut(s) 848
HpaII CCGG 3 cut(s) 38, 205, 1269
HphI GGTGA 4 cut(s) 451, 1112, 1225, 1687
Hpy166II GTNNAC 2 cut(s) 395, 1233
Hpy8I GTNNAC 2 cut(s) 395, 1233
HpyAV CCTTC 6 cut(s) 44, 369, 593, 956, 991, 1436
HpyCH4III ACNGT 7 cut(s) 136, 144, 224, 506, 1022, 1250, 1704
HpyCH4IV ACGT 1 cut(s) 1648
HpyF10VI GCNNNNNNNGC 6 cut(s) 235, 455, 593, 917, 1121, 1328
HpyF3I CTNAG 4 cut(s) 631, 763, 865, 1195
HpySE526I ACGT 1 cut(s) 1648
Hsp92II CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1141, 1506
HspAI GCGC 1 cut(s) 1377
Kpn2I TCCGGA 1 cut(s) 1268
Kzo9I GATC 3 cut(s) 421, 1366, 1486
LguI GCTCTTC 1 cut(s) 465
LmnI GCTCC 2 cut(s) 579, 1397
Lsp1109I GCAGC 4 cut(s) 222, 225, 1343, 1696
MaeI CTAG 2 cut(s) 110, 243
MaeII ACGT 1 cut(s) 1648
MaeIII GTNAC 7 cut(s) 439, 506, 736, 880, 1100, 1240, 1675
MalI GATC 3 cut(s) 423, 1368, 1488
MboI GATC 3 cut(s) 421, 1366, 1486
MboII GAAGA 6 cut(s) 59, 90, 452, 1153, 1486, 1651
MflI RGATCY 2 cut(s) 1366, 1486
MhlI GDGCHC 2 cut(s) 331, 537
MlyI GAGTC 3 cut(s) 262, 1385, 1673
MmeI TCCRAC 3 cut(s) 356, 621, 1150
Mph1103I ATGCAT 2 cut(s) 191, 1036
MroI TCCGGA 1 cut(s) 1268
MslI CAYNNNNRTG 1 cut(s) 540
MspI CCGG 3 cut(s) 38, 205, 1269
MspR9I CCNGG 6 cut(s) 150, 206, 311, 923, 1082, 1238
MvaI CCWGG 5 cut(s) 150, 311, 923, 1082, 1238
MwoI GCNNNNNNNGC 6 cut(s) 235, 455, 593, 917, 1121, 1328
NciI CCSGG 1 cut(s) 206
NdeII GATC 3 cut(s) 421, 1366, 1486
NlaIII CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1141, 1506
NlaIV GGNNCC 1 cut(s) 433
NmuCI GTSAC 5 cut(s) 439, 506, 736, 1100, 1675
NsiI ATGCAT 2 cut(s) 191, 1036
NspI RCATGY 2 cut(s) 894, 1038
OliI CACNNNNGTG 1 cut(s) 540
PaeR7I CTCGAG 1 cut(s) 19
PagI TCATGA 2 cut(s) 298, 1137
PciSI GCTCTTC 1 cut(s) 465
PfoI TCCNGGA 1 cut(s) 148
PinAI ACCGGT 1 cut(s) 37
PkrI GCNGC 4 cut(s) 237, 240, 1333, 1711
PleI GAGTC 3 cut(s) 261, 1385, 1672
PpsI GAGTC 3 cut(s) 261, 1385, 1672
PshAI GACNNNNGTC 1 cut(s) 1251
PsiI TTATAA 1 cut(s) 498
Psp6I CCWGG 5 cut(s) 148, 309, 921, 1080, 1236
PspGI CCWGG 5 cut(s) 148, 309, 921, 1080, 1236
PspN4I GGNNCC 1 cut(s) 433
PstNI CAGNNNCTG 3 cut(s) 449, 1394, 1685
PsuI RGATCY 2 cut(s) 1366, 1486
RsaI GTAC 1 cut(s) 1134
RsaNI GTAC 1 cut(s) 1133
RseI CAYNNNNRTG 1 cut(s) 540
SapI GCTCTTC 1 cut(s) 465
SatI GCNGC 4 cut(s) 236, 239, 1332, 1710
Sau3AI GATC 3 cut(s) 421, 1366, 1486
SchI GAGTC 3 cut(s) 262, 1385, 1673
ScrFI CCNGG 6 cut(s) 150, 206, 311, 923, 1082, 1238
SduI GDGCHC 2 cut(s) 331, 537
SfcI CTRYAG 2 cut(s) 135, 1700
Sfr274I CTCGAG 1 cut(s) 19
SlaI CTCGAG 1 cut(s) 19
SmiMI CAYNNNNRTG 1 cut(s) 540
SmlI CTYRAG 4 cut(s) 19, 332, 530, 565
SmoI CTYRAG 4 cut(s) 19, 332, 530, 565
SsiI CCGC 1 cut(s) 54
SspMI CTAG 2 cut(s) 110, 243
StyD4I CCNGG 6 cut(s) 148, 204, 309, 921, 1080, 1236
StyI CCWWGG 3 cut(s) 242, 1545, 1659
TaaI ACNGT 7 cut(s) 136, 144, 224, 506, 1022, 1250, 1704
TaiI ACGT 1 cut(s) 1651
TaqI TCGA 3 cut(s) 20, 476, 1735
TatI WGTACW 1 cut(s) 1132
TscAI CASTG 3 cut(s) 139, 547, 589
TseFI GTSAC 5 cut(s) 439, 506, 736, 1100, 1675
TseI GCWGC 4 cut(s) 235, 238, 1331, 1709
Tsp45I GTSAC 5 cut(s) 439, 506, 736, 1100, 1675
TspDTI ATGAA 8 cut(s) 108, 285, 393, 656, 671, 798, 975, 1154
TspRI CASTG 3 cut(s) 139, 547, 589
XapI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
XceI RCATGY 2 cut(s) 894, 1038
XhoI CTCGAG 1 cut(s) 19
XmaJI CCTAGG 1 cut(s) 242
XspI CTAG 2 cut(s) 110, 243
Zsp2I ATGCAT 2 cut(s) 191, 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.