Belongs to the AAA ATPase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| AAA_assoc | PF14363 | 40 - 122 | 1.3e-23 | Domain associated at C-terminal with AAA |
| AAA | PF00004 | 243 - 317 | 9.7e-09 | ATPase family associated with various cellular activities (AAA) |
| AAA | PF00004 | 334 - 392 | 2.3e-07 | ATPase family associated with various cellular activities (AAA) |
| AAA_lid_At3g28540 | PF25568 | 394 - 468 | 9.8e-27 | At3g28540-like, AAA+ ATPase lid domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 132, 757 |
| AccI | GTMKAC | 2 cut(s) | 63, 761 |
| AciI | CCGC | 2 cut(s) | 177, 1295 |
| AclWI | GGATC | 4 cut(s) | 208, 221, 1097, 1121 |
| AcsI | RAATTY | 1 cut(s) | 1048 |
| AcuI | CTGAAG | 2 cut(s) | 426, 852 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 95, 210, 752, 753 |
| AflIII | ACRYGT | 1 cut(s) | 429 |
| AgsI | TTSAA | 7 cut(s) | 76, 190, 893, 1274, 1354, 1375, 1490 |
| AjiI | CACGTC | 1 cut(s) | 449 |
| AleI | CACNNNNGTG | 1 cut(s) | 447 |
| AluBI | AGCT | 7 cut(s) | 222, 377, 410, 535, 608, 626, 1073 |
| AluI | AGCT | 7 cut(s) | 222, 377, 410, 535, 608, 626, 1073 |
| Alw26I | GTCTC | 3 cut(s) | 857, 954, 1337 |
| AlwI | GGATC | 4 cut(s) | 208, 221, 1097, 1121 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 38 |
| Ama87I | CYCGRG | 1 cut(s) | 746 |
| ApeKI | GCWGC | 1 cut(s) | 773 |
| ApoI | RAATTY | 1 cut(s) | 1048 |
| AspS9I | GGNCC | 2 cut(s) | 98, 740 |
| AsuC2I | CCSGG | 3 cut(s) | 552, 747, 748 |
| AsuHPI | GGTGA | 4 cut(s) | 1019, 1094, 1352, 1459 |
| AsuII | TTCGAA | 2 cut(s) | 542, 1188 |
| AvaI | CYCGRG | 1 cut(s) | 746 |
| AvaII | GGWCC | 2 cut(s) | 98, 740 |
| BamHI | GGATCC | 1 cut(s) | 213 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 410, 442 |
| BbsI | GAAGAC | 1 cut(s) | 509 |
| BbvI | GCAGC | 1 cut(s) | 785 |
| BccI | CCATC | 4 cut(s) | 4, 772, 950, 1052 |
| BclI | TGATCA | 1 cut(s) | 666 |
| BcnI | CCSGG | 3 cut(s) | 552, 747, 748 |
| BcoDI | GTCTC | 3 cut(s) | 857, 954, 1337 |
| BfaI | CTAG | 3 cut(s) | 246, 381, 623 |
| BisI | GCNGC | 1 cut(s) | 774 |
| BlsI | GCNGC | 1 cut(s) | 775 |
| Bme1390I | CCNGG | 3 cut(s) | 552, 747, 748 |
| Bme18I | GGWCC | 2 cut(s) | 98, 740 |
| BmeT110I | CYCGRG | 1 cut(s) | 746 |
| BmgBI | CACGTC | 1 cut(s) | 449 |
| BmgT120I | GGNCC | 2 cut(s) | 98, 740 |
| BmiI | GGNNCC | 4 cut(s) | 100, 111, 215, 440 |
| BmrFI | CCNGG | 3 cut(s) | 552, 747, 748 |
| BmrI | ACTGGG | 2 cut(s) | 97, 762 |
| BmsI | GCATC | 1 cut(s) | 610 |
| BmuI | ACTGGG | 2 cut(s) | 97, 762 |
| BpiI | GAAGAC | 1 cut(s) | 509 |
| Bpu14I | TTCGAA | 2 cut(s) | 542, 1188 |
| BpuEI | CTTGAG | 3 cut(s) | 500, 833, 1286 |
| BpuMI | CCSGG | 3 cut(s) | 552, 747, 748 |
| Bsa29I | ATCGAT | 2 cut(s) | 878, 900 |
| BsaJI | CCNNGG | 2 cut(s) | 562, 746 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1298, 1328 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 95, 210, 752, 753 |
| Bse118I | RCCGGY | 1 cut(s) | 1291 |
| Bse1I | ACTGG | 2 cut(s) | 103, 757 |
| BseCI | ATCGAT | 2 cut(s) | 878, 900 |
| BseDI | CCNNGG | 2 cut(s) | 562, 746 |
| BseGI | GGATG | 5 cut(s) | 150, 313, 601, 1228, 1303 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 95, 210, 752, 753 |
| BseMII | CTCAG | 1 cut(s) | 836 |
| BseNI | ACTGG | 2 cut(s) | 103, 757 |
| BseRI | GAGGAG | 3 cut(s) | 956, 1262, 1430 |
| BseXI | GCAGC | 1 cut(s) | 785 |
| Bsh1285I | CGRYCG | 1 cut(s) | 136 |
| BshVI | ATCGAT | 2 cut(s) | 878, 900 |
| BsiEI | CGRYCG | 1 cut(s) | 136 |
| BsiHKCI | CYCGRG | 1 cut(s) | 746 |
| BsiSI | CCGG | 4 cut(s) | 551, 747, 1130, 1292 |
| BslFI | GGGAC | 1 cut(s) | 763 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 95, 210, 752, 753 |
| BsmAI | GTCTC | 3 cut(s) | 857, 954, 1337 |
| BsmBI | CGTCTC | 1 cut(s) | 954 |
| BsmFI | GGGAC | 1 cut(s) | 763 |
| BsoBI | CYCGRG | 1 cut(s) | 746 |
| Bsp119I | TTCGAA | 2 cut(s) | 542, 1188 |
| Bsp19I | CCATGG | 1 cut(s) | 562 |
| BspACI | CCGC | 2 cut(s) | 177, 1295 |
| BspCNI | CTCAG | 1 cut(s) | 837 |
| BspDI | ATCGAT | 2 cut(s) | 878, 900 |
| BspLI | GGNNCC | 4 cut(s) | 100, 111, 215, 440 |
| BspPI | GGATC | 4 cut(s) | 208, 221, 1097, 1121 |
| BspT104I | TTCGAA | 2 cut(s) | 542, 1188 |
| BsrFI | RCCGGY | 1 cut(s) | 1291 |
| BsrI | ACTGG | 2 cut(s) | 103, 757 |
| BssAI | RCCGGY | 1 cut(s) | 1291 |
| BssECI | CCNNGG | 2 cut(s) | 562, 746 |
| BssNAI | GTATAC | 1 cut(s) | 64 |
| BssT1I | CCWWGG | 1 cut(s) | 562 |
| Bst1107I | GTATAC | 1 cut(s) | 64 |
| Bst4CI | ACNGT | 2 cut(s) | 575, 826 |
| BstBI | TTCGAA | 2 cut(s) | 542, 1188 |
| BstDEI | CTNAG | 4 cut(s) | 227, 299, 845, 1209 |
| BstDSI | CCRYGG | 1 cut(s) | 562 |
| BstF5I | GGATG | 5 cut(s) | 150, 313, 601, 1228, 1303 |
| BstMAI | GTCTC | 3 cut(s) | 857, 954, 1337 |
| BstMCI | CGRYCG | 1 cut(s) | 136 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 228, 779 |
| BstNSI | RCATGY | 2 cut(s) | 433, 488 |
| BstSCI | CCNGG | 3 cut(s) | 550, 745, 746 |
| BstV1I | GCAGC | 1 cut(s) | 785 |
| BstV2I | GAAGAC | 1 cut(s) | 509 |
| BstX2I | RGATCY | 2 cut(s) | 213, 1126 |
| BstYI | RGATCY | 2 cut(s) | 213, 1126 |
| BstZ17I | GTATAC | 1 cut(s) | 64 |
| Bsu15I | ATCGAT | 2 cut(s) | 878, 900 |
| BsuTUI | ATCGAT | 2 cut(s) | 878, 900 |
| BtgI | CCRYGG | 1 cut(s) | 562 |
| BtgZI | GCGATG | 2 cut(s) | 20, 791 |
| BtrI | CACGTC | 1 cut(s) | 449 |
| BtsCI | GGATG | 5 cut(s) | 150, 313, 601, 1228, 1303 |
| BtsIMutI | CAGTG | 1 cut(s) | 324 |
| CaiI | CAGNNNCTG | 1 cut(s) | 38 |
| Cfr10I | RCCGGY | 1 cut(s) | 1291 |
| Cfr13I | GGNCC | 2 cut(s) | 98, 740 |
| Cfr9I | CCCGGG | 1 cut(s) | 746 |
| ClaI | ATCGAT | 2 cut(s) | 878, 900 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1095, 1130 |
| CviAII | CATG | 6 cut(s) | 167, 304, 430, 485, 563, 587 |
| DdeI | CTNAG | 4 cut(s) | 227, 299, 845, 1209 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 132, 757 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 132, 757 |
| EciI | GGCGGA | 1 cut(s) | 1310 |
| Eco130I | CCWWGG | 1 cut(s) | 562 |
| Eco32I | GATATC | 1 cut(s) | 898 |
| Eco47I | GGWCC | 2 cut(s) | 98, 740 |
| Eco57I | CTGAAG | 2 cut(s) | 426, 852 |
| Eco88I | CYCGRG | 1 cut(s) | 746 |
| EcoRV | GATATC | 1 cut(s) | 898 |
| EcoT14I | CCWWGG | 1 cut(s) | 562 |
| ErhI | CCWWGG | 1 cut(s) | 562 |
| Esp3I | CGTCTC | 1 cut(s) | 954 |
| FaeI | CATG | 6 cut(s) | 170, 307, 433, 488, 566, 590 |
| FaqI | GGGAC | 1 cut(s) | 763 |
| FatI | CATG | 6 cut(s) | 166, 303, 429, 484, 562, 586 |
| FbaI | TGATCA | 1 cut(s) | 666 |
| FblI | GTMKAC | 2 cut(s) | 63, 761 |
| Fnu4HI | GCNGC | 1 cut(s) | 774 |
| FokI | GGATG | 5 cut(s) | 137, 320, 588, 1235, 1310 |
| Fsp4HI | GCNGC | 1 cut(s) | 774 |
| FspBI | CTAG | 3 cut(s) | 246, 381, 623 |
| GluI | GCNGC | 1 cut(s) | 774 |
| HapII | CCGG | 4 cut(s) | 551, 747, 1130, 1292 |
| Hin1II | CATG | 6 cut(s) | 170, 307, 433, 488, 566, 590 |
| HincII | GTYRAC | 1 cut(s) | 819 |
| HindII | GTYRAC | 1 cut(s) | 819 |
| HindIII | AAGCTT | 1 cut(s) | 533 |
| HinfI | GANTC | 4 cut(s) | 126, 236, 583, 1309 |
| HpaII | CCGG | 4 cut(s) | 551, 747, 1130, 1292 |
| HphI | GGTGA | 4 cut(s) | 1019, 1094, 1352, 1459 |
| Hpy166II | GTNNAC | 4 cut(s) | 64, 762, 819, 1117 |
| Hpy188I | TCNGA | 6 cut(s) | 98, 558, 666, 707, 846, 1327 |
| Hpy188III | TCNNGA | 6 cut(s) | 190, 217, 479, 655, 812, 1282 |
| Hpy8I | GTNNAC | 4 cut(s) | 64, 762, 819, 1117 |
| HpyAV | CCTTC | 9 cut(s) | 491, 637, 843, 931, 998, 1328, 1369, 1378, 1396 |
| HpyCH4III | ACNGT | 2 cut(s) | 575, 826 |
| HpyCH4IV | ACGT | 2 cut(s) | 448, 611 |
| HpyCH4V | TGCA | 1 cut(s) | 47 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 228, 779 |
| HpyF3I | CTNAG | 4 cut(s) | 227, 299, 845, 1209 |
| HpySE526I | ACGT | 2 cut(s) | 448, 611 |
| Hsp92II | CATG | 6 cut(s) | 170, 307, 433, 488, 566, 590 |
| Ksp22I | TGATCA | 1 cut(s) | 666 |
| LmnI | GCTCC | 1 cut(s) | 374 |
| Lsp1109I | GCAGC | 1 cut(s) | 785 |
| LweI | GCATC | 1 cut(s) | 610 |
| MaeI | CTAG | 3 cut(s) | 246, 381, 623 |
| MaeII | ACGT | 2 cut(s) | 448, 611 |
| MaeIII | GTNAC | 4 cut(s) | 449, 589, 1027, 1314 |
| MflI | RGATCY | 2 cut(s) | 213, 1126 |
| MluCI | AATT | 4 cut(s) | 80, 784, 1048, 1498 |
| MlyI | GAGTC | 3 cut(s) | 120, 230, 592 |
| MmeI | TCCRAC | 1 cut(s) | 87 |
| MseI | TTAA | 4 cut(s) | 434, 828, 912, 1197 |
| MslI | CAYNNNNRTG | 1 cut(s) | 447 |
| MspA1I | CMGCKG | 1 cut(s) | 177 |
| MspI | CCGG | 4 cut(s) | 551, 747, 1130, 1292 |
| MspR9I | CCNGG | 3 cut(s) | 552, 747, 748 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 228, 779 |
| NciI | CCSGG | 3 cut(s) | 552, 747, 748 |
| NcoI | CCATGG | 1 cut(s) | 562 |
| NlaIII | CATG | 6 cut(s) | 170, 307, 433, 488, 566, 590 |
| NlaIV | GGNNCC | 4 cut(s) | 100, 111, 215, 440 |
| NmuCI | GTSAC | 1 cut(s) | 449 |
| NspI | RCATGY | 2 cut(s) | 433, 488 |
| NspV | TTCGAA | 2 cut(s) | 542, 1188 |
| OliI | CACNNNNGTG | 1 cut(s) | 447 |
| PciI | ACATGT | 1 cut(s) | 429 |
| PfeI | GAWTC | 1 cut(s) | 1309 |
| PkrI | GCNGC | 1 cut(s) | 775 |
| PleI | GAGTC | 3 cut(s) | 120, 230, 591 |
| PpsI | GAGTC | 3 cut(s) | 120, 230, 591 |
| PscI | ACATGT | 1 cut(s) | 429 |
| PspN4I | GGNNCC | 4 cut(s) | 100, 111, 215, 440 |
| PspPI | GGNCC | 2 cut(s) | 98, 740 |
| PstNI | CAGNNNCTG | 1 cut(s) | 38 |
| PsuI | RGATCY | 2 cut(s) | 213, 1126 |
| RseI | CAYNNNNRTG | 1 cut(s) | 447 |
| SaqAI | TTAA | 4 cut(s) | 434, 828, 912, 1197 |
| SatI | GCNGC | 1 cut(s) | 774 |
| Sau96I | GGNCC | 2 cut(s) | 98, 740 |
| SchI | GAGTC | 3 cut(s) | 120, 230, 592 |
| ScrFI | CCNGG | 3 cut(s) | 552, 747, 748 |
| SfaNI | GCATC | 1 cut(s) | 610 |
| SfuI | TTCGAA | 2 cut(s) | 542, 1188 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1291 |
| SinI | GGWCC | 2 cut(s) | 98, 740 |
| SmaI | CCCGGG | 1 cut(s) | 748 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 447 |
| SmlI | CTYRAG | 3 cut(s) | 479, 812, 1265 |
| SmoI | CTYRAG | 3 cut(s) | 479, 812, 1265 |
| Sse9I | AATT | 4 cut(s) | 80, 784, 1048, 1498 |
| SsiI | CCGC | 2 cut(s) | 177, 1295 |
| SspMI | CTAG | 3 cut(s) | 246, 381, 623 |
| StyD4I | CCNGG | 3 cut(s) | 550, 745, 746 |
| StyI | CCWWGG | 1 cut(s) | 562 |
| TaaI | ACNGT | 2 cut(s) | 575, 826 |
| TaiI | ACGT | 2 cut(s) | 451, 614 |
| TaqI | TCGA | 7 cut(s) | 362, 542, 878, 900, 1188, 1365, 1407 |
| TaqII | GACCGA | 2 cut(s) | 122, 468 |
| TasI | AATT | 4 cut(s) | 80, 784, 1048, 1498 |
| TfiI | GAWTC | 1 cut(s) | 1309 |
| Tru1I | TTAA | 4 cut(s) | 434, 828, 912, 1197 |
| Tru9I | TTAA | 4 cut(s) | 434, 828, 912, 1197 |
| TscAI | CASTG | 1 cut(s) | 331 |
| TseFI | GTSAC | 1 cut(s) | 449 |
| TseI | GCWGC | 1 cut(s) | 773 |
| Tsp45I | GTSAC | 1 cut(s) | 449 |
| TspDTI | ATGAA | 4 cut(s) | 183, 1010, 1017, 1042 |
| TspMI | CCCGGG | 1 cut(s) | 746 |
| TspRI | CASTG | 1 cut(s) | 331 |
| VpaK11BI | GGWCC | 2 cut(s) | 98, 740 |
| XapI | RAATTY | 1 cut(s) | 1048 |
| XceI | RCATGY | 2 cut(s) | 433, 488 |
| XmaI | CCCGGG | 1 cut(s) | 746 |
| XmiI | GTMKAC | 2 cut(s) | 63, 761 |
| XspI | CTAG | 3 cut(s) | 246, 381, 623 |