Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

79032566 .. 79034161

Gene Structure 1596 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021879

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGTGGTTGTGGCCTCAACTGGGCTCAGTGCTGGCAAGTATGATGTTTGCTTATGCCATGTTTCACCGATACTTTCCCTATCAACTTCGGAGCCATATTCAAAGATATACCTTAAAATGGTTTGGCTATGTGTACCCTTACATCCAAATTTCCTTTGATGAATATGCCGGCGAGTTGCACAAGCGCAGTGAAGTGTTCACCGCCATCCAAAGCTACCTCAGCACGAAGTCATCTACGGAAGCAAAACGGCTCAAAGCAAAAGAAGTCAAGGGTAGCAAGTCTCTAGTCCTTGTCATGGATGACAATGAAGAGGTGACTGATGAATTCCAAGGCATTAAGCTCTGGGACATAATCACAGGGTCTTATCTTGACCATGTGAGAAAAGAAGGGAAGGAAATAGCAGTGAGTCATAGGCAAAGGAAGCTTTACATTAACAATCCTGCTTCTGGATACAAAATGAGGAAATGGAGCTCTGTAGACTTTGATCACCCTGCAACATTTGAGAGCATAGCAATGGAGCCAAAAAAGAAAGAGGAAATCATCAATGACCTCATGGAGTTCAGCAACGGGAAGGAGTACTATGCAAAAATCGGGAAACCTTGGAAGCGGGGTTATCTTCTGTATGGGCCACCAGGCAATGGTAAGTCCACCATGATTGCTGCCATGTCTAACCTCATGAACTATGATGTTTATGATCTTGAGCTGACGACAGTGAAGAGCAACACTGATCTGAGGAAGTTGCTGATTGACACGCCAAGTAAGGCTATTATTGTGATCGAGGACATTGATTGCTCACTTGATCTTACGGGCCAACGAAAGAAGAAGGAGAAAGATGAAGAAGATAAAGAAAAAAAGGATCCAACCCGTAAAATGAGGGAAGGAGAAGAAAGCAAAGCAAGCCAGGTTACTTTGTCTGGGCTATTGAACTTCATTGATGGTATTTGGTCAGCTTGCGGGGGTGAAAGAATCATTGTGTTTACCACTAACTATGTGGAGAAACTTGATCCTGCACTGATAAGGAGAGGAAGGATGGACAAGCATATCAAACTGTCTTATTGCTGCTATGAAGCATTCAAAGTGCTTGCAAGGAACTACTTGAATTTAGATTCACATGAATTGTTCGGAAGCATTGAACGTTTGTTGGGGGAGACCAACATGACTCCAGCTGATGTGGCAGAGAACTTGATGCCTAAATCTAATGTAGAGGATGCCATCTCTTGTTTGAAGAAATTGATTGAAGCTCTAGAGATTGCGAAGGAGGAGGCAAGAGTGAAGGCTGAGGAAGAAGCAAGCAACAAGGCAGTTAAAGATGCAAAAGTGAACGCAAAGAAAGAAGCAAAATTGAAGGAAGAGGAAGAAGCAAAATTGAAGGCAGAGAAAGCAGAGAAGAAAACAGAGGAGTCTGCAGAAGATGAAGAGAAATGTATCGGAACATCAGCTAAAGAAGATGCGAAAGAAAATGGAGTTGTTGAAAATGAGGAAAAGAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

497

Amino Acids

56.79

Weight (kDa)

6.08

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	25 - 115	2.3e-24	Domain associated at C-terminal with AAA
AAA	PF00004	205 - 351	2.4e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	353 - 426	5.1e-33	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	638
AccI	GTMKAC	1 cut(s)	477
AciI	CCGC	3 cut(s)	201, 607, 954
AclI	AACGTT	1 cut(s)	1135
AclWI	GGATC	3 cut(s)	851, 864, 998
AcsI	RAATTY	3 cut(s)	147, 323, 1099
AfaI	GTAC	2 cut(s)	134, 578
AfiI	CCNNNNNNNGG	5 cut(s)	20, 117, 295, 446, 638
AjnI	CCWGG	2 cut(s)	631, 900
AluBI	AGCT	9 cut(s)	213, 340, 424, 471, 703, 950, 1166, 1241, 1439
AluI	AGCT	9 cut(s)	213, 340, 424, 471, 703, 950, 1166, 1241, 1439
Alw21I	GWGCWC	1 cut(s)	473
Alw26I	GTCTC	2 cut(s)	285, 1142
AlwI	GGATC	3 cut(s)	851, 864, 998
AoxI	GGCC	3 cut(s)	11, 626, 808
ApeKI	GCWGC	2 cut(s)	659, 1059
ApoI	RAATTY	3 cut(s)	147, 323, 1099
AspLEI	GCGC	1 cut(s)	186
AspS9I	GGNCC	2 cut(s)	626, 808
AsuHPI	GGTGA	5 cut(s)	56, 190, 325, 479, 971
BamHI	GGATCC	1 cut(s)	856
BanII	GRGCYC	2 cut(s)	26, 473
Bbv12I	GWGCWC	1 cut(s)	473
BbvCI	CCTCAGC	2 cut(s)	218, 1278
BbvI	GCAGC	2 cut(s)	646, 1046
BccI	CCATC	4 cut(s)	212, 929, 1024, 1220
BceAI	ACGGC	1 cut(s)	263
BciT130I	CCWGG	2 cut(s)	633, 902
BciVI	GTATCC	1 cut(s)	443
BclI	TGATCA	1 cut(s)	484
BcoDI	GTCTC	2 cut(s)	285, 1142
BfaI	CTAG	2 cut(s)	284, 1244
BfmI	CTRYAG	2 cut(s)	474, 1404
BfuI	GTATCC	1 cut(s)	443
BisI	GCNGC	2 cut(s)	660, 1060
BlsI	GCNGC	2 cut(s)	661, 1061
BmcAI	AGTACT	1 cut(s)	578
Bme1390I	CCNGG	2 cut(s)	633, 902
BmgT120I	GGNCC	2 cut(s)	626, 808
BmiI	GGNNCC	3 cut(s)	92, 519, 858
BmrFI	CCNGG	2 cut(s)	633, 902
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	1176, 1198, 1300, 1438
BmuI	ACTGGG	1 cut(s)	29
BpmI	CTGGAG	1 cut(s)	1146
Bpu10I	CCTNAGC	2 cut(s)	218, 1278
BpuEI	CTTGAG	1 cut(s)	719
BsaI	GGTCTC	1 cut(s)	1142
BsaJI	CCNNGG	2 cut(s)	328, 599
Bsc4I	CCNNNNNNNGG	5 cut(s)	20, 117, 295, 446, 638
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	1 cut(s)	24
Bse3DI	GCAATG	2 cut(s)	519, 643
BseBI	CCWGG	2 cut(s)	633, 902
BseDI	CCNNGG	2 cut(s)	328, 599
BseGI	GGATG	5 cut(s)	141, 204, 304, 1035, 1213
BseLI	CCNNNNNNNGG	5 cut(s)	20, 117, 295, 446, 638
BseMI	GCAATG	2 cut(s)	519, 643
BseMII	CTCAG	4 cut(s)	39, 232, 722, 1269
BseNI	ACTGG	1 cut(s)	24
BseRI	GAGGAG	2 cut(s)	1274, 1412
BseXI	GCAGC	2 cut(s)	646, 1046
BsgI	GTGCAG	1 cut(s)	993
BshFI	GGCC	3 cut(s)	13, 628, 810
BsiHKAI	GWGCWC	1 cut(s)	473
BsiSI	CCGG	1 cut(s)	168
BslFI	GGGAC	1 cut(s)	359
BslI	CCNNNNNNNGG	5 cut(s)	20, 117, 295, 446, 638
BsmAI	GTCTC	2 cut(s)	285, 1142
BsmFI	GGGAC	1 cut(s)	359
BsmI	GAATGC	1 cut(s)	1070
BsnI	GGCC	3 cut(s)	13, 628, 810
Bso31I	GGTCTC	1 cut(s)	1142
Bsp1286I	GDGCHC	2 cut(s)	26, 473
Bsp143I	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
BspACI	CCGC	3 cut(s)	201, 607, 954
BspANI	GGCC	3 cut(s)	13, 628, 810
BspCNI	CTCAG	4 cut(s)	38, 231, 723, 1270
BspHI	TCATGA	1 cut(s)	675
BspLI	GGNNCC	3 cut(s)	92, 519, 858
BspMAI	CTGCAG	1 cut(s)	1408
BspPI	GGATC	3 cut(s)	851, 864, 998
BspQI	GCTCTTC	1 cut(s)	710
BspTNI	GGTCTC	1 cut(s)	1142
BsrDI	GCAATG	2 cut(s)	519, 643
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	1 cut(s)	24
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	2 cut(s)	328, 599
BssMI	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
BssT1I	CCWWGG	2 cut(s)	328, 599
Bst2UI	CCWGG	2 cut(s)	633, 902
Bst4CI	ACNGT	2 cut(s)	712, 1050
Bst6I	CTCTTC	4 cut(s)	303, 710, 1344, 1410
BstC8I	GCNNGC	6 cut(s)	33, 169, 898, 952, 1083, 1291
BstDEI	CTNAG	4 cut(s)	25, 218, 731, 1278
BstF5I	GGATG	5 cut(s)	141, 204, 304, 1035, 1213
BstHHI	GCGC	1 cut(s)	186
BstKTI	GATC	7 cut(s)	487, 697, 730, 777, 802, 859, 1006
BstMAI	GTCTC	2 cut(s)	285, 1142
BstMBI	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
BstMWI	GCNNNNNNNGC	5 cut(s)	219, 421, 897, 1172, 1379
BstNI	CCWGG	2 cut(s)	633, 902
BstSCI	CCNGG	2 cut(s)	631, 900
BstSFI	CTRYAG	2 cut(s)	474, 1404
BstV1I	GCAGC	2 cut(s)	646, 1046
BstX2I	RGATCY	1 cut(s)	856
BstYI	RGATCY	1 cut(s)	856
BsuI	GTATCC	1 cut(s)	443
BsuRI	GGCC	3 cut(s)	13, 628, 810
BtsCI	GGATG	5 cut(s)	141, 204, 304, 1035, 1213
BtsI	GCAGTG	2 cut(s)	193, 408
BtsIMutI	CAGTG	6 cut(s)	33, 193, 408, 717, 723, 1010
Cac8I	GCNNGC	6 cut(s)	33, 169, 898, 952, 1083, 1291
CciI	TCATGA	1 cut(s)	675
CfoI	GCGC	1 cut(s)	186
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	2 cut(s)	626, 808
Csp6I	GTAC	2 cut(s)	133, 577
CspCI	CAANNNNNGTGG	2 cut(s)	637, 672
CviAII	CATG	9 cut(s)	58, 295, 374, 553, 652, 664, 676, 1112, 1156
CviQI	GTAC	2 cut(s)	133, 577
DdeI	CTNAG	4 cut(s)	25, 218, 731, 1278
DpnI	GATC	7 cut(s)	486, 696, 729, 776, 801, 858, 1005
DpnII	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
Eam1104I	CTCTTC	4 cut(s)	303, 710, 1344, 1410
EarI	CTCTTC	4 cut(s)	303, 710, 1344, 1410
Ecl136II	GAGCTC	1 cut(s)	471
Eco130I	CCWWGG	2 cut(s)	328, 599
Eco24I	GRGCYC	2 cut(s)	26, 473
Eco31I	GGTCTC	1 cut(s)	1142
Eco53kI	GAGCTC	1 cut(s)	471
EcoICRI	GAGCTC	1 cut(s)	471
EcoRI	GAATTC	1 cut(s)	323
EcoRII	CCWGG	2 cut(s)	631, 900
EcoT14I	CCWWGG	2 cut(s)	328, 599
EcoT38I	GRGCYC	2 cut(s)	26, 473
ErhI	CCWWGG	2 cut(s)	328, 599
FaeI	CATG	9 cut(s)	61, 298, 377, 556, 655, 667, 679, 1115, 1159
FaqI	GGGAC	1 cut(s)	359
FatI	CATG	9 cut(s)	57, 294, 373, 552, 651, 663, 675, 1111, 1155
FauI	CCCGC	2 cut(s)	600, 947
FbaI	TGATCA	1 cut(s)	484
FblI	GTMKAC	1 cut(s)	477
Fnu4HI	GCNGC	2 cut(s)	660, 1060
FokI	GGATG	5 cut(s)	128, 191, 311, 1042, 1220
FriOI	GRGCYC	2 cut(s)	26, 473
Fsp4HI	GCNGC	2 cut(s)	660, 1060
FspBI	CTAG	2 cut(s)	284, 1244
GlaI	GCGC	1 cut(s)	185
GluI	GCNGC	2 cut(s)	660, 1060
GsuI	CTGGAG	1 cut(s)	1146
HaeIII	GGCC	3 cut(s)	13, 628, 810
HapII	CCGG	1 cut(s)	168
HhaI	GCGC	1 cut(s)	186
Hin1II	CATG	9 cut(s)	61, 298, 377, 556, 655, 667, 679, 1115, 1159
Hin6I	GCGC	1 cut(s)	184
HinP1I	GCGC	1 cut(s)	184
HindIII	AAGCTT	1 cut(s)	422
HinfI	GANTC	5 cut(s)	406, 966, 1106, 1159, 1400
HpaII	CCGG	1 cut(s)	168
HphI	GGTGA	5 cut(s)	56, 190, 325, 479, 971
Hpy166II	GTNNAC	6 cut(s)	133, 198, 478, 648, 978, 1321
Hpy188I	TCNGA	4 cut(s)	90, 732, 1124, 1430
Hpy188III	TCNNGA	6 cut(s)	368, 447, 592, 676, 698, 1244
Hpy8I	GTNNAC	6 cut(s)	133, 198, 478, 648, 978, 1321
HpyCH4III	ACNGT	2 cut(s)	712, 1050
HpyCH4IV	ACGT	1 cut(s)	1135
HpyCH4V	TGCA	7 cut(s)	178, 494, 584, 1010, 1085, 1313, 1406
HpyF10VI	GCNNNNNNNGC	5 cut(s)	219, 421, 897, 1172, 1379
HpyF3I	CTNAG	4 cut(s)	25, 218, 731, 1278
HpySE526I	ACGT	1 cut(s)	1135
Hsp92II	CATG	9 cut(s)	61, 298, 377, 556, 655, 667, 679, 1115, 1159
HspAI	GCGC	1 cut(s)	184
KroI	GCCGGC	1 cut(s)	167
KroNI	GCCGGC	1 cut(s)	169
Ksp22I	TGATCA	1 cut(s)	484
Kzo9I	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
LguI	GCTCTTC	1 cut(s)	710
LmnI	GCTCC	3 cut(s)	90, 468, 517
Lsp1109I	GCAGC	2 cut(s)	646, 1046
LweI	GCATC	4 cut(s)	1176, 1198, 1300, 1438
MaeI	CTAG	2 cut(s)	284, 1244
MaeII	ACGT	1 cut(s)	1135
MaeIII	GTNAC	2 cut(s)	313, 904
MalI	GATC	7 cut(s)	486, 696, 729, 776, 801, 858, 1005
MboI	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
MflI	RGATCY	1 cut(s)	856
MhlI	GDGCHC	2 cut(s)	26, 473
MluCI	AATT	7 cut(s)	147, 323, 1099, 1115, 1229, 1340, 1364
MlyI	GAGTC	3 cut(s)	415, 1153, 1409
MmeI	TCCRAC	1 cut(s)	884
MroNI	GCCGGC	1 cut(s)	167
MseI	TTAA	4 cut(s)	113, 336, 432, 1305
MslI	CAYNNNNRTG	1 cut(s)	512
MspA1I	CMGCKG	1 cut(s)	1166
MspI	CCGG	1 cut(s)	168
MspR9I	CCNGG	2 cut(s)	633, 902
Mva1269I	GAATGC	1 cut(s)	1070
MvaI	CCWGG	2 cut(s)	633, 902
MwoI	GCNNNNNNNGC	5 cut(s)	219, 421, 897, 1172, 1379
NaeI	GCCGGC	1 cut(s)	169
NdeII	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
NgoMIV	GCCGGC	1 cut(s)	167
NlaIII	CATG	9 cut(s)	61, 298, 377, 556, 655, 667, 679, 1115, 1159
NlaIV	GGNNCC	3 cut(s)	92, 519, 858
NmuCI	GTSAC	1 cut(s)	313
PagI	TCATGA	1 cut(s)	675
PciSI	GCTCTTC	1 cut(s)	710
PctI	GAATGC	1 cut(s)	1070
PdiI	GCCGGC	1 cut(s)	169
PfeI	GAWTC	2 cut(s)	966, 1106
PflMI	CCANNNNNTGG	1 cut(s)	638
PkrI	GCNGC	2 cut(s)	661, 1061
PleI	GAGTC	3 cut(s)	414, 1153, 1408
PpsI	GAGTC	3 cut(s)	414, 1153, 1408
Psp124BI	GAGCTC	1 cut(s)	473
Psp1406I	AACGTT	1 cut(s)	1135
Psp6I	CCWGG	2 cut(s)	631, 900
PspGI	CCWGG	2 cut(s)	631, 900
PspN4I	GGNNCC	3 cut(s)	92, 519, 858
PspPI	GGNCC	2 cut(s)	626, 808
PstI	CTGCAG	1 cut(s)	1408
PsuI	RGATCY	1 cut(s)	856
PvuII	CAGCTG	1 cut(s)	1166
RsaI	GTAC	2 cut(s)	134, 578
RsaNI	GTAC	2 cut(s)	133, 577
RseI	CAYNNNNRTG	1 cut(s)	512
SacI	GAGCTC	1 cut(s)	473
SapI	GCTCTTC	1 cut(s)	710
SaqAI	TTAA	4 cut(s)	113, 336, 432, 1305
SatI	GCNGC	2 cut(s)	660, 1060
Sau3AI	GATC	7 cut(s)	484, 694, 727, 774, 799, 856, 1003
Sau96I	GGNCC	2 cut(s)	626, 808
ScaI	AGTACT	1 cut(s)	578
SchI	GAGTC	3 cut(s)	415, 1153, 1409
ScrFI	CCNGG	2 cut(s)	633, 902
SduI	GDGCHC	2 cut(s)	26, 473
SfaNI	GCATC	4 cut(s)	1176, 1198, 1300, 1438
SfcI	CTRYAG	2 cut(s)	474, 1404
SmiMI	CAYNNNNRTG	1 cut(s)	512
SmlI	CTYRAG	1 cut(s)	698
SmoI	CTYRAG	1 cut(s)	698
Sse9I	AATT	7 cut(s)	147, 323, 1099, 1115, 1229, 1340, 1364
SsiI	CCGC	3 cut(s)	201, 607, 954
SspMI	CTAG	2 cut(s)	284, 1244
SstI	GAGCTC	1 cut(s)	473
StyD4I	CCNGG	2 cut(s)	631, 900
StyI	CCWWGG	2 cut(s)	328, 599
TaaI	ACNGT	2 cut(s)	712, 1050
TaiI	ACGT	1 cut(s)	1138
TaqI	TCGA	1 cut(s)	777
TasI	AATT	7 cut(s)	147, 323, 1099, 1115, 1229, 1340, 1364
TatI	WGTACW	1 cut(s)	576
TfiI	GAWTC	2 cut(s)	966, 1106
Tru1I	TTAA	4 cut(s)	113, 336, 432, 1305
Tru9I	TTAA	4 cut(s)	113, 336, 432, 1305
TscAI	CASTG	6 cut(s)	33, 193, 408, 717, 730, 1017
TseFI	GTSAC	1 cut(s)	313
TseI	GCWGC	2 cut(s)	659, 1059
Tsp45I	GTSAC	1 cut(s)	313
TspDTI	ATGAA	9 cut(s)	174, 321, 336, 692, 849, 919, 1080, 1128, 1428
TspGWI	ACGGA	1 cut(s)	251
TspRI	CASTG	6 cut(s)	33, 193, 408, 717, 730, 1017
Van91I	CCANNNNNTGG	1 cut(s)	638
XapI	RAATTY	3 cut(s)	147, 323, 1099
XbaI	TCTAGA	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	988
XmiI	GTMKAC	1 cut(s)	477
XspI	CTAG	2 cut(s)	284, 1244
ZrmI	AGTACT	1 cut(s)	578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.