Prupe.5G183800_v2.0.a1

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
15286926 .. 15289010
2085 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G183800.1

Sequence Viewer

Length: 1551 bp
ATGATGCCCCTGCCATCATCAACAATGACCCAGATGTGGGCAACAATGGGCTCAACTTTAGCCAGCTTCATGTTCGTTTGGGCAATCATCCGCCAGTACTGCCCCTACGAGCTTCGTAGGTTCTTTGAGAAATACTCACACAGAATCATGGGCTACTTCTACCCCTACATCAAAATCTCCATCCATGAGTTCACTGGGGACAGGCTCAAGAGAAGCGAGGCCTATTCTGCCGTGGAAGCCTATCTCAGCAACAACACTTCAAAGAGCGCCAAGAGGCTCAAGGCAGAGATGGTCAAAGACAGCAGCAACTTGGTTTTGAGCATGGATGAGTACGAGAGAGTTACAGATGATTTTCAGGGTGCTAAGGTTTGGTGGGTTTTGTCCAAATCTGTGTCTCCAGGAAGATCAATGTCAATGTCTTACTATCCAGAGCAGGAGAAGAGGTTTTACAAGCTCACTTTTCACAAGAAGTACAGGGATATAATTACAGAGTCTTATTTAGACCATGTGGTGAGGGAAGGGAAGGAAATCAGGGTGAGAAATAGGCAGAGGAAGCTTTACACAAATAGTCCTGGATACAAATGGCCTAGCTACAAGCAGACCATGTGGAGCCACATTGTTTTTGAGCATCCAGCTACTTTTGAAACAATGGCATTGGAGCCAGATAAGAAGAGGGAGATCATTGAAGATTTGGTGACTTTCAGCAAAAGCAAGGATTTTTATGCAAGAATTGGCAAGGCTTGGAAGAGGGGTTATTTGCTTTTTGGGCCACCAGGGACTGGGAAATCTACCATGATTGCTGCAATGGCTAATTTGTTGGGTTATGATGTTTATGATCTTGAGCTCACTGCTGTCAAGGACAACACAGAGCTTAGGAAGCTTTTGATTGAGACCACAAGTAAGTCTATAATTGTGATTGAGGATATTGACTGCTCACTTGATCTTACAGGCCAGAGGAAGAAGAAGGCAGACAAATCTTCTTTGGAAGATGAAACTAAGTCCAGTAAGGAGAGAATTAAGGAACCAAAAGAAGAGGGACATGGCAGCAGCAAGGTCACTCTTTCTGGGCTGTTGAATTTCATTGATGGGCTTTGGTCTGCTTGTGGTGGTGAGAGGCTTGTTGTGTTCACCACAAACTATGTTGAGAAGCTTGATCCTGCCCTCATCAGGAGGGGCAGAATGGACAAACATATTGAGCTTTCTTTTTGCAGTTTTGATGGGTTCAAAGTTCTGGCAAAGAATTATCTGAAGCTTGAAACACATCAAATGTTTGATACAATTCAGAGGCTGATGGGGGAGGTCAAAATGACCCCTGCTGATGTAGCAGAGAATCTCATGCCTAAGTCCCCACAAGATGATCCAGATAGATGCCTTTCAAATTTCATTCAAGCTCTTGAAGAAGCCAAGGAAGAAGCAGCTAAGAAAACGGCTGAAGAAATTAAGGAGATTGGTGCAGCCGAGGAGAAGGATGATGATGATGTGCAGACACAAGAAAACAAAGATGTTGAAATCCAGAGTGATTTGGTTGGCAATGCGAATGCGTCGTTGTAG

Protein Analysis

517

Amino Acids

59.42

Weight (kDa)

6.79

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28580 AT3G28580 AT5G40010
fragaria_vesca FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 779
AciI CCGC 1 cut(s) 91
AclWI GGATC 2 cut(s) 1148, 1352
AcsI RAATTY 2 cut(s) 1075, 1378
AcuI CTGAAG 2 cut(s) 1268, 1452
AfaI GTAC 3 cut(s) 98, 332, 473
AfiI CCNNNNNNNGG 4 cut(s) 36, 37, 779, 1167
AjnI CCWGG 3 cut(s) 397, 571, 772
Alw21I GWGCWC 1 cut(s) 846
Alw26I GTCTC 2 cut(s) 399, 884
AlwI GGATC 2 cut(s) 1148, 1352
AlwNI CAGNNNCTG 2 cut(s) 779, 1288
AoxI GGCC 4 cut(s) 219, 584, 767, 949
ApeKI GCWGC 6 cut(s) 303, 800, 1044, 1047, 1415, 1454
ApoI RAATTY 2 cut(s) 1075, 1378
AspLEI GCGC 1 cut(s) 269
AspS9I GGNCC 1 cut(s) 767
AsuHPI GGTGA 5 cut(s) 523, 547, 706, 1120, 1121
BanII GRGCYC 2 cut(s) 53, 846
BarI GAAGNNNNNNTAC 2 cut(s) 431, 463
Bbv12I GWGCWC 1 cut(s) 846
BbvI GCAGC 6 cut(s) 315, 787, 1056, 1059, 1427, 1466
BccI CCATC 6 cut(s) 22, 188, 283, 1079, 1211, 1285
BceAI ACGGC 2 cut(s) 215, 1443
BciT130I CCWGG 3 cut(s) 399, 573, 774
BciVI GTATCC 1 cut(s) 569
BcoDI GTCTC 2 cut(s) 399, 884
BfaI CTAG 1 cut(s) 588
BfoI RGCGCY 1 cut(s) 270
BfuI GTATCC 1 cut(s) 569
BisI GCNGC 6 cut(s) 304, 801, 1045, 1048, 1416, 1455
BlsI GCNGC 6 cut(s) 305, 802, 1046, 1049, 1417, 1456
BmcAI AGTACT 1 cut(s) 98
Bme1390I CCNGG 3 cut(s) 399, 573, 774
BmgT120I GGNCC 1 cut(s) 767
BmiI GGNNCC 3 cut(s) 611, 660, 1023
BmrFI CCNGG 3 cut(s) 399, 573, 774
BmrI ACTGGG 2 cut(s) 204, 789
BmsI GCATC 2 cut(s) 637, 1358
BmuI ACTGGG 2 cut(s) 204, 789
BplI GAGNNNNNCTC 2 cut(s) 119, 151
BpmI CTGGAG 1 cut(s) 381
Bpu10I CCTNAGC 2 cut(s) 363, 872
BpuEI CTTGAG 3 cut(s) 191, 263, 860
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 4 cut(s) 231, 773, 1404, 1458
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bsc4I CCNNNNNNNGG 4 cut(s) 36, 37, 779, 1167
Bse1I ACTGG 4 cut(s) 94, 199, 784, 1002
Bse3DI GCAATG 2 cut(s) 810, 1537
BseBI CCWGG 3 cut(s) 399, 573, 774
BseDI CCNNGG 4 cut(s) 231, 773, 1404, 1458
BseGI GGATG 5 cut(s) 87, 180, 331, 628, 1474
BseLI CCNNNNNNNGG 4 cut(s) 36, 37, 779, 1167
BseMI GCAATG 2 cut(s) 810, 1537
BseMII CTCAG 1 cut(s) 259
BseNI ACTGG 4 cut(s) 94, 199, 784, 1002
BseRI GAGGAG 1 cut(s) 1475
BseXI GCAGC 6 cut(s) 315, 787, 1056, 1059, 1427, 1466
BsgI GTGCAG 2 cut(s) 1473, 1502
BshFI GGCC 4 cut(s) 221, 586, 769, 951
BsiHKAI GWGCWC 1 cut(s) 846
BslFI GGGAC 4 cut(s) 212, 790, 1050, 1330
BslI CCNNNNNNNGG 4 cut(s) 36, 37, 779, 1167
BsmAI GTCTC 2 cut(s) 399, 884
BsmFI GGGAC 4 cut(s) 212, 790, 1050, 1330
BsmI GAATGC 1 cut(s) 1543
BsnI GGCC 4 cut(s) 221, 586, 769, 951
Bso31I GGTCTC 1 cut(s) 884
Bsp1286I GDGCHC 2 cut(s) 53, 846
Bsp143I GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
BspACI CCGC 1 cut(s) 91
BspANI GGCC 4 cut(s) 221, 586, 769, 951
BspCNI CTCAG 1 cut(s) 258
BspLI GGNNCC 3 cut(s) 611, 660, 1023
BspPI GGATC 2 cut(s) 1148, 1352
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 810, 1537
BsrI ACTGG 4 cut(s) 94, 199, 784, 1002
BssECI CCNNGG 4 cut(s) 231, 773, 1404, 1458
BssMI GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
BssT1I CCWWGG 1 cut(s) 1404
Bst2UI CCWGG 3 cut(s) 399, 573, 774
Bst6I CTCTTC 4 cut(s) 434, 665, 740, 1026
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 6 cut(s) 245, 363, 872, 996, 1341, 1419
BstDSI CCRYGG 1 cut(s) 231
BstF5I GGATG 5 cut(s) 87, 180, 331, 628, 1474
BstH2I RGCGCY 1 cut(s) 270
BstHHI GCGC 1 cut(s) 269
BstKTI GATC 6 cut(s) 407, 681, 838, 943, 1156, 1360
BstMAI GTCTC 2 cut(s) 399, 884
BstMBI GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
BstMWI GCNNNNNNNGC 8 cut(s) 99, 227, 236, 553, 766, 806, 877, 1322
BstNI CCWGG 3 cut(s) 399, 573, 774
BstSCI CCNGG 3 cut(s) 397, 571, 772
BstV1I GCAGC 6 cut(s) 315, 787, 1056, 1059, 1427, 1466
BsuI GTATCC 1 cut(s) 569
BsuRI GGCC 4 cut(s) 221, 586, 769, 951
BtgI CCRYGG 1 cut(s) 231
BtsCI GGATG 5 cut(s) 87, 180, 331, 628, 1474
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 2 cut(s) 192, 846
Cac8I GCNNGC 1 cut(s) 64
CaiI CAGNNNCTG 2 cut(s) 779, 1288
CfoI GCGC 1 cut(s) 269
Cfr13I GGNCC 1 cut(s) 767
CseI GACGC 1 cut(s) 1530
Csp6I GTAC 3 cut(s) 97, 331, 472
CviAII CATG 9 cut(s) 70, 148, 185, 322, 506, 604, 793, 1040, 1336
CviQI GTAC 3 cut(s) 97, 331, 472
DdeI CTNAG 6 cut(s) 245, 363, 872, 996, 1341, 1419
DpnI GATC 6 cut(s) 406, 680, 837, 942, 1155, 1359
DpnII GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
Eam1104I CTCTTC 4 cut(s) 434, 665, 740, 1026
EarI CTCTTC 4 cut(s) 434, 665, 740, 1026
EciI GGCGGA 1 cut(s) 80
Ecl136II GAGCTC 1 cut(s) 844
Eco130I CCWWGG 1 cut(s) 1404
Eco147I AGGCCT 1 cut(s) 221
Eco24I GRGCYC 2 cut(s) 53, 846
Eco31I GGTCTC 1 cut(s) 884
Eco53kI GAGCTC 1 cut(s) 844
Eco57I CTGAAG 2 cut(s) 1268, 1452
EcoICRI GAGCTC 1 cut(s) 844
EcoRII CCWGG 3 cut(s) 397, 571, 772
EcoT14I CCWWGG 1 cut(s) 1404
EcoT38I GRGCYC 2 cut(s) 53, 846
ErhI CCWWGG 1 cut(s) 1404
FaeI CATG 9 cut(s) 73, 151, 188, 325, 509, 607, 796, 1043, 1339
FaqI GGGAC 4 cut(s) 212, 790, 1050, 1330
FatI CATG 9 cut(s) 69, 147, 184, 321, 505, 603, 792, 1039, 1335
Fnu4HI GCNGC 6 cut(s) 304, 801, 1045, 1048, 1416, 1455
FokI GGATG 5 cut(s) 74, 167, 338, 615, 1481
FriOI GRGCYC 2 cut(s) 53, 846
Fsp4HI GCNGC 6 cut(s) 304, 801, 1045, 1048, 1416, 1455
FspBI CTAG 1 cut(s) 588
GlaI GCGC 1 cut(s) 268
GluI GCNGC 6 cut(s) 304, 801, 1045, 1048, 1416, 1455
GsuI CTGGAG 1 cut(s) 381
HaeII RGCGCY 1 cut(s) 270
HaeIII GGCC 4 cut(s) 221, 586, 769, 951
HgaI GACGC 1 cut(s) 1530
HhaI GCGC 1 cut(s) 269
Hin1II CATG 9 cut(s) 73, 151, 188, 325, 509, 607, 796, 1043, 1339
Hin6I GCGC 1 cut(s) 267
HinP1I GCGC 1 cut(s) 267
HindIII AAGCTT 4 cut(s) 554, 878, 1148, 1250
HinfI GANTC 3 cut(s) 144, 491, 1330
HphI GGTGA 5 cut(s) 523, 547, 706, 1120, 1121
Hpy166II GTNNAC 2 cut(s) 192, 1128
Hpy188I TCNGA 2 cut(s) 1248, 1284
Hpy188III TCNNGA 7 cut(s) 208, 428, 839, 1168, 1361, 1394, 1513
Hpy8I GTNNAC 2 cut(s) 192, 1128
Hpy99I CGWCG 1 cut(s) 1546
HpyAV CCTTC 4 cut(s) 512, 517, 958, 1459
HpyCH4V TGCA 5 cut(s) 725, 803, 1209, 1454, 1483
HpyF10VI GCNNNNNNNGC 8 cut(s) 99, 227, 236, 553, 766, 806, 877, 1322
HpyF3I CTNAG 6 cut(s) 245, 363, 872, 996, 1341, 1419
Hsp92II CATG 9 cut(s) 73, 151, 188, 325, 509, 607, 796, 1043, 1339
HspAI GCGC 1 cut(s) 267
Kzo9I GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
LmnI GCTCC 2 cut(s) 609, 658
Lsp1109I GCAGC 6 cut(s) 315, 787, 1056, 1059, 1427, 1466
LweI GCATC 2 cut(s) 637, 1358
MaeI CTAG 1 cut(s) 588
MaeIII GTNAC 3 cut(s) 340, 694, 1054
MalI GATC 6 cut(s) 406, 680, 837, 942, 1155, 1359
MboI GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
MhlI GDGCHC 2 cut(s) 53, 846
MlyI GAGTC 1 cut(s) 500
MseI TTAA 2 cut(s) 1017, 1440
MspR9I CCNGG 3 cut(s) 399, 573, 774
Mva1269I GAATGC 1 cut(s) 1543
MvaI CCWGG 3 cut(s) 399, 573, 774
MwoI GCNNNNNNNGC 8 cut(s) 99, 227, 236, 553, 766, 806, 877, 1322
NdeII GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
NlaIII CATG 9 cut(s) 73, 151, 188, 325, 509, 607, 796, 1043, 1339
NlaIV GGNNCC 3 cut(s) 611, 660, 1023
NmeAIII GCCGAG 1 cut(s) 1483
NmuCI GTSAC 2 cut(s) 694, 1054
PceI AGGCCT 1 cut(s) 221
PctI GAATGC 1 cut(s) 1543
PfeI GAWTC 2 cut(s) 144, 1330
PflMI CCANNNNNTGG 1 cut(s) 779
PfoI TCCNGGA 2 cut(s) 397, 571
PkrI GCNGC 6 cut(s) 305, 802, 1046, 1049, 1417, 1456
PleI GAGTC 1 cut(s) 499
PpsI GAGTC 1 cut(s) 499
Psp124BI GAGCTC 1 cut(s) 846
Psp6I CCWGG 3 cut(s) 397, 571, 772
PspGI CCWGG 3 cut(s) 397, 571, 772
PspN4I GGNNCC 3 cut(s) 611, 660, 1023
PspPI GGNCC 1 cut(s) 767
PstNI CAGNNNCTG 2 cut(s) 779, 1288
RsaI GTAC 3 cut(s) 98, 332, 473
RsaNI GTAC 3 cut(s) 97, 331, 472
SacI GAGCTC 1 cut(s) 846
SaqAI TTAA 2 cut(s) 1017, 1440
SatI GCNGC 6 cut(s) 304, 801, 1045, 1048, 1416, 1455
Sau3AI GATC 6 cut(s) 404, 678, 835, 940, 1153, 1357
Sau96I GGNCC 1 cut(s) 767
ScaI AGTACT 1 cut(s) 98
SchI GAGTC 1 cut(s) 500
ScrFI CCNGG 3 cut(s) 399, 573, 774
SduI GDGCHC 2 cut(s) 53, 846
SfaNI GCATC 2 cut(s) 637, 1358
SmlI CTYRAG 3 cut(s) 206, 278, 839
SmoI CTYRAG 3 cut(s) 206, 278, 839
SseBI AGGCCT 1 cut(s) 221
SsiI CCGC 1 cut(s) 91
SspMI CTAG 1 cut(s) 588
SstI GAGCTC 1 cut(s) 846
StuI AGGCCT 1 cut(s) 221
StyD4I CCNGG 3 cut(s) 397, 571, 772
StyI CCWWGG 1 cut(s) 1404
TatI WGTACW 2 cut(s) 96, 471
TfiI GAWTC 2 cut(s) 144, 1330
Tru1I TTAA 2 cut(s) 1017, 1440
Tru9I TTAA 2 cut(s) 1017, 1440
TscAI CASTG 2 cut(s) 199, 853
TseFI GTSAC 2 cut(s) 694, 1054
TseI GCWGC 6 cut(s) 303, 800, 1044, 1047, 1415, 1454
Tsp45I GTSAC 2 cut(s) 694, 1054
TspDTI ATGAA 4 cut(s) 58, 1005, 1069, 1372
TspRI CASTG 2 cut(s) 199, 853
Van91I CCANNNNNTGG 1 cut(s) 779
XapI RAATTY 2 cut(s) 1075, 1378
XcmI CCANNNNNNNNNTGG 1 cut(s) 191
XspI CTAG 1 cut(s) 588
ZrmI AGTACT 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.