Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

67088640 .. 67090230

Gene Structure 1591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0540800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

ATGGGAAGAGCTCCTTGCTGTGACAAGAATGGACTCAAGAAAGGTCCATGGACTTCTGAAGAAGATGTTATTCTCGTCAACTATATTCAGGAACATGGTCCAGGCAATTGGCGTAACCTCCCAAAGAACGCAGGACTCCAAAGATGTGGCAAGAGTTGCCGGCTTAGATGGACTAACTACCTGAGGCCTGATATAAAGAGAGGAAGATTTTCCTTCGAAGAAGAAGAGACTATAATCCAACTTCATAGCATCCTCGGCAACAAGTGGTCAGCTATTGCAGCTCGCCTGCCAGGAAGAACTGACAACGAAATCAAGAACTACTGGAACACACACATCCGAAAAAGGCTTCTCCGAATGGGAATCGATCCAGTCACTCACGCTCCACGCCTCGATCTTCTTGACCTATCCTCCATCCTCGGTTCCTATGTCTCCAATATCAACCCAGCTGCAGCACTTCTCAACTTGTCAAACTTGTTAGGCACACAACAAGCCCTTAATGTCAATCCAGAACTGTTGCGGCTTGTAACCACTCTCTCGTCACTGAAACAAGGAAACCCCCAAATGTTTTCACAAAACCAAAACCAGGTTTGCAATATTTCCCAGGATTTACAAAACCAGTTTGTCCCATCGTTACAGTCCAATCCTCAGTTCCAAAATCTCTTCCAAGATGACTTTTCTCCAGACATGGCAAGCCTAAAACAGCTCATGCAAATGATCAATACTGAATCCAACTTACCCAACATGTCCAACTTCAGCAGCCCAGCTTCTTATTCCCAGGAAAATATAGTCCCTAATTCCAATTTCGGTCCCGAAACAGCTGTTTCCAATTTGCCAAGCTATGTACCTAGCAGTACTTCTAATCCTACTGTTCCTGAGTTGGCAGGAAATTCATTTTTCCAATTGCCTTTAAACAACAGCAATGTTAACCATGATTTCGGGTTTGATTCTGTTCTGTCGACGCCTCATTCGAGCCCGACTACCTTGAATTCTTCGGGCACATACAACAACATAAACAGCAGCAGCACAGAGGATGAGAGAGATCTGGAAAGCTATTGCAGCAACCTGTTGAAGTTTGAGATCCCGGACAGTACCTTGGATATCAATGATTACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

371

Amino Acids

41.46

Weight (kDa)

5.43

Isoelectric Point (pI)

54.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 61	2.3e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 76	9.5e-12	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	67 - 111	2.7e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	71 - 114	4.4e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	956
AciI	CCGC	1 cut(s)	517
AclWI	GGATC	2 cut(s)	359, 1072
AcsI	RAATTY	2 cut(s)	886, 985
AcuI	CTGAAG	2 cut(s)	78, 736
AcyI	GRCGYC	1 cut(s)	959
AfaI	GTAC	3 cut(s)	843, 853, 1090
AfiI	CCNNNNNNNGG	1 cut(s)	583
AflIII	ACRYGT	2 cut(s)	741, 1110
AgsI	TTSAA	2 cut(s)	985, 1069
AjnI	CCWGG	5 cut(s)	100, 289, 582, 600, 774
AjuI	GAANNNNNNNTTGG	2 cut(s)	632, 664
AluBI	AGCT	9 cut(s)	11, 272, 281, 446, 703, 764, 818, 837, 1050
AluI	AGCT	9 cut(s)	11, 272, 281, 446, 703, 764, 818, 837, 1050
Alw21I	GWGCWC	1 cut(s)	13
Alw26I	GTCTC	2 cut(s)	221, 433
AlwI	GGATC	2 cut(s)	359, 1072
AoxI	GGCC	1 cut(s)	185
ApeKI	GCWGC	7 cut(s)	278, 446, 449, 756, 1017, 1020, 1056
ApoI	RAATTY	2 cut(s)	886, 985
ArsI	GACNNNNNNTTYG	2 cut(s)	949, 981
Asp700I	GAANNNNTTC	1 cut(s)	208
AspS9I	GGNCC	3 cut(s)	44, 98, 806
AsuC2I	CCSGG	1 cut(s)	1082
AsuII	TTCGAA	1 cut(s)	216
AvaII	GGWCC	3 cut(s)	44, 98, 806
AxyI	CCTNAGG	1 cut(s)	182
BaeGI	GKGCMC	1 cut(s)	998
BanII	GRGCYC	2 cut(s)	13, 974
Bbv12I	GWGCWC	1 cut(s)	13
BbvI	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BccI	CCATC	3 cut(s)	162, 419, 634
BciT130I	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BclI	TGATCA	1 cut(s)	714
BcnI	CCSGG	1 cut(s)	1082
BcoDI	GTCTC	2 cut(s)	221, 433
BfaI	CTAG	1 cut(s)	846
BfmI	CTRYAG	1 cut(s)	447
BglII	AGATCT	1 cut(s)	1039
BisI	GCNGC	8 cut(s)	279, 447, 450, 518, 757, 1018, 1021, 1057
BlsI	GCNGC	8 cut(s)	280, 448, 451, 519, 758, 1019, 1022, 1058
BmcAI	AGTACT	1 cut(s)	853
Bme1390I	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
Bme18I	GGWCC	3 cut(s)	44, 98, 806
BmgT120I	GGNCC	3 cut(s)	44, 98, 806
BmiI	GGNNCC	2 cut(s)	421, 808
BmrFI	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
BmsI	GCATC	1 cut(s)	258
BpmI	CTGGAG	1 cut(s)	663
Bpu14I	TTCGAA	1 cut(s)	216
BpuEI	CTTGAG	1 cut(s)	20
BpuMI	CCSGG	1 cut(s)	1082
Bsa29I	ATCGAT	1 cut(s)	363
BsaHI	GRCGYC	1 cut(s)	959
BsaJI	CCNNGG	6 cut(s)	47, 253, 415, 600, 774, 1092
BsaXI	ACNNNNNCTCC	4 cut(s)	364, 392, 394, 422
Bsc4I	CCNNNNNNNGG	1 cut(s)	583
Bse118I	RCCGGY	1 cut(s)	159
Bse1I	ACTGG	3 cut(s)	326, 368, 616
Bse21I	CCTNAGG	1 cut(s)	182
Bse3DI	GCAATG	1 cut(s)	925
BseBI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BseCI	ATCGAT	1 cut(s)	363
BseDI	CCNNGG	6 cut(s)	47, 253, 415, 600, 774, 1092
BseGI	GGATG	4 cut(s)	249, 333, 411, 1036
BseLI	CCNNNNNNNGG	1 cut(s)	583
BseMI	GCAATG	1 cut(s)	925
BseMII	CTCAG	3 cut(s)	173, 659, 864
BseNI	ACTGG	3 cut(s)	326, 368, 616
BseSI	GKGCMC	1 cut(s)	998
BseXI	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BseYI	CCCAGC	2 cut(s)	442, 760
BshFI	GGCC	1 cut(s)	187
BshVI	ATCGAT	1 cut(s)	363
BsiHKAI	GWGCWC	1 cut(s)	13
BsiSI	CCGG	2 cut(s)	160, 1082
BslFI	GGGAC	3 cut(s)	608, 773, 792
BslI	CCNNNNNNNGG	1 cut(s)	583
BsmAI	GTCTC	2 cut(s)	221, 433
BsmFI	GGGAC	3 cut(s)	608, 773, 792
BsnI	GGCC	1 cut(s)	187
Bsp119I	TTCGAA	1 cut(s)	216
Bsp1286I	GDGCHC	3 cut(s)	13, 974, 998
Bsp143I	GATC	5 cut(s)	364, 391, 714, 1039, 1077
Bsp19I	CCATGG	1 cut(s)	47
BspACI	CCGC	1 cut(s)	517
BspANI	GGCC	1 cut(s)	187
BspCNI	CTCAG	3 cut(s)	174, 658, 865
BspDI	ATCGAT	1 cut(s)	363
BspLI	GGNNCC	2 cut(s)	421, 808
BspMAI	CTGCAG	1 cut(s)	451
BspPI	GGATC	2 cut(s)	359, 1072
BspT104I	TTCGAA	1 cut(s)	216
BsrDI	GCAATG	1 cut(s)	925
BsrFI	RCCGGY	1 cut(s)	159
BsrI	ACTGG	3 cut(s)	326, 368, 616
BssAI	RCCGGY	1 cut(s)	159
BssECI	CCNNGG	6 cut(s)	47, 253, 415, 600, 774, 1092
BssMI	GATC	5 cut(s)	364, 391, 714, 1039, 1077
BssNI	GRCGYC	1 cut(s)	959
BssT1I	CCWWGG	2 cut(s)	47, 1092
Bst2UI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
Bst4CI	ACNGT	4 cut(s)	513, 636, 868, 1088
Bst6I	CTCTTC	2 cut(s)	219, 665
BstACI	GRCGYC	1 cut(s)	959
BstAPI	GCANNNNNTGC	1 cut(s)	156
BstBI	TTCGAA	1 cut(s)	216
BstC8I	GCNNGC	4 cut(s)	161, 283, 287, 691
BstDEI	CTNAG	4 cut(s)	164, 182, 645, 873
BstDSI	CCRYGG	1 cut(s)	47
BstF5I	GGATG	4 cut(s)	249, 333, 411, 1036
BstKTI	GATC	5 cut(s)	367, 394, 717, 1042, 1080
BstMAI	GTCTC	2 cut(s)	221, 433
BstMBI	GATC	5 cut(s)	364, 391, 714, 1039, 1077
BstMWI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
BstNI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
BstNSI	RCATGY	2 cut(s)	745, 1114
BstSCI	CCNGG	6 cut(s)	100, 289, 582, 600, 774, 1080
BstSFI	CTRYAG	1 cut(s)	447
BstSLI	GKGCMC	1 cut(s)	998
BstV1I	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
BstX2I	RGATCY	2 cut(s)	1039, 1077
BstXI	CCANNNNNNTGG	2 cut(s)	108, 146
BstYI	RGATCY	2 cut(s)	1039, 1077
Bsu15I	ATCGAT	1 cut(s)	363
Bsu36I	CCTNAGG	1 cut(s)	182
BsuRI	GGCC	1 cut(s)	187
BsuTUI	ATCGAT	1 cut(s)	363
BtgI	CCRYGG	1 cut(s)	47
BtsCI	GGATG	4 cut(s)	249, 333, 411, 1036
BtsIMutI	CAGTG	1 cut(s)	539
Cac8I	GCNNGC	4 cut(s)	161, 283, 287, 691
Cfr10I	RCCGGY	1 cut(s)	159
Cfr13I	GGNCC	3 cut(s)	44, 98, 806
ClaI	ATCGAT	1 cut(s)	363
CseI	GACGC	1 cut(s)	967
CsiI	ACCWGGT	1 cut(s)	582
Csp6I	GTAC	3 cut(s)	842, 852, 1089
CviAII	CATG	7 cut(s)	48, 95, 685, 706, 742, 929, 1111
CviQI	GTAC	3 cut(s)	842, 852, 1089
DdeI	CTNAG	4 cut(s)	164, 182, 645, 873
DpnI	GATC	5 cut(s)	366, 393, 716, 1041, 1079
DpnII	GATC	5 cut(s)	364, 391, 714, 1039, 1077
DraI	TTTAAA	1 cut(s)	909
Eam1104I	CTCTTC	2 cut(s)	219, 665
EarI	CTCTTC	2 cut(s)	219, 665
Ecl136II	GAGCTC	1 cut(s)	11
Eco130I	CCWWGG	2 cut(s)	47, 1092
Eco147I	AGGCCT	1 cut(s)	187
Eco24I	GRGCYC	2 cut(s)	13, 974
Eco32I	GATATC	1 cut(s)	1099
Eco47I	GGWCC	3 cut(s)	44, 98, 806
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	2 cut(s)	78, 736
Eco81I	CCTNAGG	1 cut(s)	182
EcoICRI	GAGCTC	1 cut(s)	11
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	5 cut(s)	100, 289, 582, 600, 774
EcoRV	GATATC	1 cut(s)	1099
EcoT14I	CCWWGG	2 cut(s)	47, 1092
EcoT38I	GRGCYC	2 cut(s)	13, 974
ErhI	CCWWGG	2 cut(s)	47, 1092
FaeI	CATG	7 cut(s)	51, 98, 688, 709, 745, 932, 1114
FalI	AAGNNNNNCTT	1 cut(s)	30
FaqI	GGGAC	3 cut(s)	608, 773, 792
FatI	CATG	7 cut(s)	47, 94, 684, 705, 741, 928, 1110
FbaI	TGATCA	1 cut(s)	714
FblI	GTMKAC	1 cut(s)	956
Fnu4HI	GCNGC	8 cut(s)	279, 447, 450, 518, 757, 1018, 1021, 1057
FokI	GGATG	4 cut(s)	236, 320, 398, 1043
FriOI	GRGCYC	2 cut(s)	13, 974
Fsp4HI	GCNGC	8 cut(s)	279, 447, 450, 518, 757, 1018, 1021, 1057
FspBI	CTAG	1 cut(s)	846
GluI	GCNGC	8 cut(s)	279, 447, 450, 518, 757, 1018, 1021, 1057
GsaI	CCCAGC	2 cut(s)	446, 764
GsuI	CTGGAG	1 cut(s)	663
HaeIII	GGCC	1 cut(s)	187
HapII	CCGG	2 cut(s)	160, 1082
HgaI	GACGC	1 cut(s)	967
Hin1I	GRCGYC	1 cut(s)	959
Hin1II	CATG	7 cut(s)	51, 98, 688, 709, 745, 932, 1114
HincII	GTYRAC	3 cut(s)	79, 925, 957
HindII	GTYRAC	3 cut(s)	79, 925, 957
HinfI	GANTC	5 cut(s)	33, 135, 360, 725, 944
HpaI	GTTAAC	1 cut(s)	925
HpaII	CCGG	2 cut(s)	160, 1082
Hpy166II	GTNNAC	3 cut(s)	79, 925, 957
Hpy188I	TCNGA	3 cut(s)	58, 338, 353
Hpy188III	TCNNGA	9 cut(s)	37, 89, 313, 398, 506, 680, 809, 872, 1043
Hpy8I	GTNNAC	3 cut(s)	79, 925, 957
Hpy99I	CGWCG	1 cut(s)	961
HpyAV	CCTTC	1 cut(s)	223
HpyCH4III	ACNGT	4 cut(s)	513, 636, 868, 1088
HpyCH4V	TGCA	5 cut(s)	278, 449, 591, 709, 1056
HpyF10VI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
HpyF3I	CTNAG	4 cut(s)	164, 182, 645, 873
Hsp92I	GRCGYC	1 cut(s)	959
Hsp92II	CATG	7 cut(s)	51, 98, 688, 709, 745, 932, 1114
KroI	GCCGGC	1 cut(s)	159
KroNI	GCCGGC	1 cut(s)	161
Ksp22I	TGATCA	1 cut(s)	714
KspAI	GTTAAC	1 cut(s)	925
Kzo9I	GATC	5 cut(s)	364, 391, 714, 1039, 1077
LmnI	GCTCC	2 cut(s)	16, 385
Lsp1109I	GCAGC	7 cut(s)	290, 433, 461, 768, 1029, 1032, 1068
LweI	GCATC	1 cut(s)	258
MabI	ACCWGGT	1 cut(s)	582
MaeI	CTAG	1 cut(s)	846
MaeIII	GTNAC	6 cut(s)	20, 113, 370, 523, 537, 630
MalI	GATC	5 cut(s)	366, 393, 716, 1041, 1079
MboI	GATC	5 cut(s)	364, 391, 714, 1039, 1077
MfeI	CAATTG	2 cut(s)	106, 899
MflI	RGATCY	2 cut(s)	1039, 1077
MhlI	GDGCHC	3 cut(s)	13, 974, 998
MluCI	AATT	7 cut(s)	106, 793, 799, 826, 886, 899, 985
MlyI	GAGTC	2 cut(s)	27, 129
MmeI	TCCRAC	3 cut(s)	262, 753, 771
MroNI	GCCGGC	1 cut(s)	159
MroXI	GAANNNNTTC	1 cut(s)	208
MseI	TTAA	3 cut(s)	495, 908, 924
MslI	CAYNNNNRTG	1 cut(s)	710
MspA1I	CMGCKG	2 cut(s)	446, 818
MspI	CCGG	2 cut(s)	160, 1082
MspR9I	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
MunI	CAATTG	2 cut(s)	106, 899
MvaI	CCWGG	5 cut(s)	102, 291, 584, 602, 776
MwoI	GCNNNNNNNGC	4 cut(s)	156, 255, 278, 1056
NaeI	GCCGGC	1 cut(s)	161
NciI	CCSGG	1 cut(s)	1082
NcoI	CCATGG	1 cut(s)	47
NdeII	GATC	5 cut(s)	364, 391, 714, 1039, 1077
NgoMIV	GCCGGC	1 cut(s)	159
NlaIII	CATG	7 cut(s)	51, 98, 688, 709, 745, 932, 1114
NlaIV	GGNNCC	2 cut(s)	421, 808
NmeAIII	GCCGAG	1 cut(s)	234
NmuCI	GTSAC	3 cut(s)	20, 370, 537
NspI	RCATGY	2 cut(s)	745, 1114
NspV	TTCGAA	1 cut(s)	216
PceI	AGGCCT	1 cut(s)	187
PciI	ACATGT	2 cut(s)	741, 1110
PcsI	WCGNNNNNNNCGW	1 cut(s)	965
PdiI	GCCGGC	1 cut(s)	161
PdmI	GAANNNNTTC	1 cut(s)	208
PfeI	GAWTC	3 cut(s)	360, 725, 944
PfoI	TCCNGGA	1 cut(s)	1080
PkrI	GCNGC	8 cut(s)	280, 448, 451, 519, 758, 1019, 1022, 1058
PleI	GAGTC	2 cut(s)	27, 129
PpsI	GAGTC	2 cut(s)	27, 129
PscI	ACATGT	2 cut(s)	741, 1110
Psp124BI	GAGCTC	1 cut(s)	13
Psp6I	CCWGG	5 cut(s)	100, 289, 582, 600, 774
PspFI	CCCAGC	2 cut(s)	442, 760
PspGI	CCWGG	5 cut(s)	100, 289, 582, 600, 774
PspN4I	GGNNCC	2 cut(s)	421, 808
PspPI	GGNCC	3 cut(s)	44, 98, 806
PstI	CTGCAG	1 cut(s)	451
PsuI	RGATCY	2 cut(s)	1039, 1077
PvuII	CAGCTG	2 cut(s)	446, 818
RsaI	GTAC	3 cut(s)	843, 853, 1090
RsaNI	GTAC	3 cut(s)	842, 852, 1089
RseI	CAYNNNNRTG	1 cut(s)	710
SacI	GAGCTC	1 cut(s)	13
SalI	GTCGAC	1 cut(s)	955
SaqAI	TTAA	3 cut(s)	495, 908, 924
SatI	GCNGC	8 cut(s)	279, 447, 450, 518, 757, 1018, 1021, 1057
Sau3AI	GATC	5 cut(s)	364, 391, 714, 1039, 1077
Sau96I	GGNCC	3 cut(s)	44, 98, 806
ScaI	AGTACT	1 cut(s)	853
SchI	GAGTC	2 cut(s)	27, 129
ScrFI	CCNGG	6 cut(s)	102, 291, 584, 602, 776, 1082
SduI	GDGCHC	3 cut(s)	13, 974, 998
SexAI	ACCWGGT	1 cut(s)	582
SfaNI	GCATC	1 cut(s)	258
SfcI	CTRYAG	1 cut(s)	447
SfuI	TTCGAA	1 cut(s)	216
SinI	GGWCC	3 cut(s)	44, 98, 806
SmiMI	CAYNNNNRTG	1 cut(s)	710
SmlI	CTYRAG	1 cut(s)	35
SmoI	CTYRAG	1 cut(s)	35
Sse9I	AATT	7 cut(s)	106, 793, 799, 826, 886, 899, 985
SseBI	AGGCCT	1 cut(s)	187
SsiI	CCGC	1 cut(s)	517
SspI	AATATT	1 cut(s)	595
SspMI	CTAG	1 cut(s)	846
SstI	GAGCTC	1 cut(s)	13
StuI	AGGCCT	1 cut(s)	187
StyD4I	CCNGG	6 cut(s)	100, 289, 582, 600, 774, 1080
StyI	CCWWGG	2 cut(s)	47, 1092
TaaI	ACNGT	4 cut(s)	513, 636, 868, 1088
TaqI	TCGA	5 cut(s)	216, 363, 390, 956, 968
TaqII	GACCGA	1 cut(s)	794
TasI	AATT	7 cut(s)	106, 793, 799, 826, 886, 899, 985
TatI	WGTACW	1 cut(s)	851
TauI	GCSGC	1 cut(s)	520
TfiI	GAWTC	3 cut(s)	360, 725, 944
Tru1I	TTAA	3 cut(s)	495, 908, 924
Tru9I	TTAA	3 cut(s)	495, 908, 924
TscAI	CASTG	1 cut(s)	546
TseFI	GTSAC	3 cut(s)	20, 370, 537
TseI	GCWGC	7 cut(s)	278, 446, 449, 756, 1017, 1020, 1056
Tsp45I	GTSAC	3 cut(s)	20, 370, 537
TspDTI	ATGAA	2 cut(s)	233, 879
TspRI	CASTG	1 cut(s)	546
VpaK11BI	GGWCC	3 cut(s)	44, 98, 806
XapI	RAATTY	2 cut(s)	886, 985
XceI	RCATGY	2 cut(s)	745, 1114
XmiI	GTMKAC	1 cut(s)	956
XmnI	GAANNNNTTC	1 cut(s)	208
XspI	CTAG	1 cut(s)	846
ZrmI	AGTACT	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.