Rmu_sc0006806.1_g000013

mitochondrial chaperone

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006806.1
Physical Location & Seq
Forward (+)
30519 .. 31940
1422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006806.1_g000013.1.cds

Sequence Viewer

Length: 1422 bp
atgtatgctccagcagacatgtttgctcatctaggttccacaataggtgccttggtgtttgtgtggacaatctttcaacaattttttccttaccaagttcgaaaccacatcgaaaagtactcacagagattggtgggttatgtctatccttacatccaaattaccttcaatgagttgacaggagagcgtctgatgcgcagtgaagcctattccgccattgagaactacttgagctccaagtcttccacacaagctaagcggctcaagggtgacatcaagaacaatcagtctcttgttctgagcatggatgaccatgaagaagttgctgatgagtttaaaggagtccaagtctggtgggcttctggtaagaacatatcaaaatctcagacattttcttacatcccagttaatgatgagaaaaggtactacaagctcacttttcacaaaagaaagagggatctcataattgggccttacttggctcatgttttgaaagagggtaatgctatcaaagtgaggaacaggcaaaggaagctttatactaataatgggtcacactggagccatgtggtttttgagcacccagcaacatttcagacactagctatggagccagagaagaagaaggacatcattgaggacttgacggcatttagcaaagctgaagagttctatacaagaattgggagagcttggaaaagagggtatttactttatggccctccaggtactgggaaatccacaatgattgctgccatggccaatctcttggggtatgatctctatgatcttgaattgactgcagtcaaggacaacactgagttgaggaggctgctgatcgaaacatcaagcaagtcgatcatcgtaatcgaagacattgattgctcacttgatctcacaggccaaaggaggaagcagagaaaggacagaggggatgatcaggaagagaaggatccaagggagaaggttcctaaagaagaaagggaaagcaagcctagtcaggtcactctttctgggcttctgaatttcattgatgggttgtggtcagcttgtagaggagagaggctcatagtattcacaactaatcatgttgaaaaacttgatgcagcattgattcgaaagggaaggatggacaagcatatagaattgtcatattgtaactttgaatcattcaaggtgttggctaggaactacctcaagcttgaatcacacactctgtttcccacaatctgtgatttgctggctgaagttaatatgactccagctgatgtagcagagcatttgatgcccaagacactttctggggatgttgaaatctgcctgaagaatttgatccaagctcttgaggatgagaaagagaagaaaccatcaactcaagtggaagcaaaagatcaggacaatgagtcatctgataagaaataa

Protein Analysis

473

Amino Acids

54.48

Weight (kDa)

7.64

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28580 AT3G28580 AT5G40010
fragaria_vesca FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 47
AccB7I CCANNNNNTGG 1 cut(s) 731
AciI CCGC 2 cut(s) 213, 259
AclWI GGATC 4 cut(s) 465, 947, 960, 1327
AcoI YGGCCR 1 cut(s) 759
AcsI RAATTY 2 cut(s) 1024, 1327
AcuI CTGAAG 3 cut(s) 684, 1266, 1343
AfaI GTAC 3 cut(s) 119, 425, 730
AfiI CCNNNNNNNGG 1 cut(s) 731
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 9 cut(s) 77, 169, 493, 794, 1094, 1166, 1174, 1205, 1313
AhdI GACNNNNNGTC 1 cut(s) 1402
AjnI CCWGG 1 cut(s) 724
Alw21I GWGCWC 2 cut(s) 236, 582
Alw26I GTCTC 1 cut(s) 294
AlwI GGATC 4 cut(s) 465, 947, 960, 1327
AlwNI CAGNNNCTG 1 cut(s) 731
AoxI GGCC 4 cut(s) 470, 718, 759, 901
ApeKI GCWGC 3 cut(s) 752, 832, 1106
ApoI RAATTY 2 cut(s) 1024, 1327
AspLEI GCGC 1 cut(s) 198
AspS9I GGNCC 2 cut(s) 470, 719
AsuHPI GGTGA 1 cut(s) 281
AsuII TTCGAA 2 cut(s) 100, 1117
BalI TGGCCA 1 cut(s) 761
BamHI GGATCC 1 cut(s) 952
BanI GGYRCC 1 cut(s) 47
BanII GRGCYC 1 cut(s) 236
BbsI GAAGAC 2 cut(s) 234, 879
Bbv12I GWGCWC 2 cut(s) 236, 582
BbvI GCAGC 3 cut(s) 739, 819, 1118
BccI CCATC 3 cut(s) 1028, 1123, 1375
BceAI ACGGC 1 cut(s) 663
BciT130I CCWGG 1 cut(s) 726
BclI TGATCA 1 cut(s) 937
BcoDI GTCTC 1 cut(s) 294
BfaI CTAG 4 cut(s) 32, 602, 996, 1185
BfmI CTRYAG 1 cut(s) 801
BisI GCNGC 4 cut(s) 260, 753, 833, 1107
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 4 cut(s) 261, 754, 834, 1108
BmcAI AGTACT 1 cut(s) 119
Bme1390I CCNGG 1 cut(s) 726
BmeRI GACNNNNNGTC 1 cut(s) 1402
BmgT120I GGNCC 2 cut(s) 470, 719
BmiI GGNNCC 6 cut(s) 37, 49, 563, 612, 954, 969
BmrFI CCNGG 1 cut(s) 726
BmrI ACTGGG 2 cut(s) 398, 741
BmsI GCATC 3 cut(s) 183, 1093, 1275
BmuI ACTGGG 2 cut(s) 398, 741
BoxI GACNNNNGTC 1 cut(s) 803
BpiI GAAGAC 2 cut(s) 234, 879
BplI GAGNNNNNCTC 2 cut(s) 1050, 1082
BpmI CTGGAG 3 cut(s) 580, 708, 1245
Bpu1102I GCTNAGC 1 cut(s) 255
Bpu14I TTCGAA 2 cut(s) 100, 1117
BpuEI CTTGAG 5 cut(s) 248, 250, 1181, 1359, 1364
BsaJI CCNNGG 3 cut(s) 51, 756, 956
BsaXI ACNNNNNCTCC 4 cut(s) 218, 248, 333, 363
Bsc4I CCNNNNNNNGG 1 cut(s) 731
Bse1I ACTGG 3 cut(s) 404, 563, 736
BseBI CCWGG 1 cut(s) 726
BseDI CCNNGG 3 cut(s) 51, 756, 956
BseGI GGATG 7 cut(s) 153, 313, 399, 940, 1134, 1312, 1354
BseLI CCNNNNNNNGG 1 cut(s) 731
BseMII CTCAG 3 cut(s) 290, 398, 810
BseNI ACTGG 3 cut(s) 404, 563, 736
BseRI GAGGAG 2 cut(s) 841, 1071
BseXI GCAGC 3 cut(s) 739, 819, 1118
BseYI CCCAGC 1 cut(s) 583
BshFI GGCC 4 cut(s) 472, 720, 761, 903
BshNI GGYRCC 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 236, 582
BslI CCNNNNNNNGG 1 cut(s) 731
BsmAI GTCTC 1 cut(s) 294
BsnI GGCC 4 cut(s) 472, 720, 761, 903
Bsp119I TTCGAA 2 cut(s) 100, 1117
Bsp1286I GDGCHC 2 cut(s) 236, 582
Bsp1720I GCTNAGC 1 cut(s) 255
Bsp19I CCATGG 1 cut(s) 756
BspACI CCGC 2 cut(s) 213, 259
BspANI GGCC 4 cut(s) 472, 720, 761, 903
BspCNI CTCAG 3 cut(s) 291, 397, 811
BspLI GGNNCC 6 cut(s) 37, 49, 563, 612, 954, 969
BspMAI CTGCAG 1 cut(s) 805
BspPI GGATC 4 cut(s) 465, 947, 960, 1327
BspT104I TTCGAA 2 cut(s) 100, 1117
BspT107I GGYRCC 1 cut(s) 47
BsrI ACTGG 3 cut(s) 404, 563, 736
BssECI CCNNGG 3 cut(s) 51, 756, 956
BssT1I CCWWGG 3 cut(s) 51, 756, 956
Bst2UI CCWGG 1 cut(s) 726
Bst6I CTCTTC 2 cut(s) 660, 939
BstAPI GCANNNNNTGC 1 cut(s) 1285
BstBI TTCGAA 2 cut(s) 100, 1117
BstC8I GCNNGC 2 cut(s) 992, 1242
BstDEI CTNAG 4 cut(s) 255, 299, 384, 819
BstDSI CCRYGG 1 cut(s) 756
BstF5I GGATG 7 cut(s) 153, 313, 399, 940, 1134, 1312, 1354
BstHHI GCGC 1 cut(s) 198
BstMAI GTCTC 1 cut(s) 294
BstMWI GCNNNNNNNGC 6 cut(s) 193, 212, 532, 758, 1271, 1285
BstNI CCWGG 1 cut(s) 726
BstNSI RCATGY 1 cut(s) 22
BstPAI GACNNNNGTC 1 cut(s) 803
BstSCI CCNGG 1 cut(s) 724
BstSFI CTRYAG 1 cut(s) 801
BstV1I GCAGC 3 cut(s) 739, 819, 1118
BstV2I GAAGAC 2 cut(s) 234, 879
BstX2I RGATCY 2 cut(s) 457, 952
BstXI CCANNNNNNTGG 1 cut(s) 769
BstYI RGATCY 2 cut(s) 457, 952
BsuRI GGCC 4 cut(s) 472, 720, 761, 903
BtgI CCRYGG 1 cut(s) 756
BtsCI GGATG 7 cut(s) 153, 313, 399, 940, 1134, 1312, 1354
BtsI GCAGTG 1 cut(s) 205
BtsIMutI CAGTG 3 cut(s) 205, 556, 816
Cac8I GCNNGC 2 cut(s) 992, 1242
CaiI CAGNNNCTG 1 cut(s) 731
CfoI GCGC 1 cut(s) 198
Cfr13I GGNCC 2 cut(s) 470, 719
CseI GACGC 1 cut(s) 176
Csp6I GTAC 3 cut(s) 118, 424, 729
CspCI CAANNNNNGTGG 6 cut(s) 335, 370, 730, 765, 1359, 1394
CviAII CATG 7 cut(s) 19, 304, 314, 485, 566, 757, 1088
CviQI GTAC 3 cut(s) 118, 424, 729
DdeI CTNAG 4 cut(s) 255, 299, 384, 819
DraI TTTAAA 1 cut(s) 337
DriI GACNNNNNGTC 1 cut(s) 1402
EaeI YGGCCR 1 cut(s) 759
Eam1104I CTCTTC 2 cut(s) 660, 939
Eam1105I GACNNNNNGTC 1 cut(s) 1402
EarI CTCTTC 2 cut(s) 660, 939
EciI GGCGGA 1 cut(s) 202
Ecl136II GAGCTC 1 cut(s) 234
Eco130I CCWWGG 3 cut(s) 51, 756, 956
Eco24I GRGCYC 1 cut(s) 236
Eco53kI GAGCTC 1 cut(s) 234
Eco57I CTGAAG 3 cut(s) 684, 1266, 1343
EcoICRI GAGCTC 1 cut(s) 234
EcoRII CCWGG 1 cut(s) 724
EcoT14I CCWWGG 3 cut(s) 51, 756, 956
EcoT38I GRGCYC 1 cut(s) 236
ErhI CCWWGG 3 cut(s) 51, 756, 956
FaeI CATG 7 cut(s) 22, 307, 317, 488, 569, 760, 1091
FatI CATG 7 cut(s) 18, 303, 313, 484, 565, 756, 1087
FbaI TGATCA 1 cut(s) 937
Fnu4HI GCNGC 4 cut(s) 260, 753, 833, 1107
FokI GGATG 7 cut(s) 140, 320, 386, 947, 1141, 1319, 1361
FriOI GRGCYC 1 cut(s) 236
Fsp4HI GCNGC 4 cut(s) 260, 753, 833, 1107
FspBI CTAG 4 cut(s) 32, 602, 996, 1185
FspI TGCGCA 1 cut(s) 197
GlaI GCGC 1 cut(s) 197
GluI GCNGC 4 cut(s) 260, 753, 833, 1107
GsaI CCCAGC 1 cut(s) 587
GsuI CTGGAG 3 cut(s) 580, 708, 1245
HaeIII GGCC 4 cut(s) 472, 720, 761, 903
HgaI GACGC 1 cut(s) 176
HhaI GCGC 1 cut(s) 198
Hin1II CATG 7 cut(s) 22, 307, 317, 488, 569, 760, 1091
Hin6I GCGC 1 cut(s) 196
HinP1I GCGC 1 cut(s) 196
HincII GTYRAC 1 cut(s) 177
HindII GTYRAC 1 cut(s) 177
HindIII AAGCTT 2 cut(s) 533, 1199
HinfI GANTC 6 cut(s) 342, 1114, 1166, 1205, 1258, 1403
HphI GGTGA 1 cut(s) 281
Hpy166II GTNNAC 2 cut(s) 66, 177
Hpy188I TCNGA 6 cut(s) 192, 300, 387, 597, 1023, 1411
Hpy188III TCNNGA 5 cut(s) 277, 791, 941, 1343, 1394
Hpy8I GTNNAC 2 cut(s) 66, 177
HpyAV CCTTC 5 cut(s) 175, 619, 943, 958, 1119
HpyCH4V TGCA 2 cut(s) 803, 1106
HpyF10VI GCNNNNNNNGC 6 cut(s) 193, 212, 532, 758, 1271, 1285
HpyF3I CTNAG 4 cut(s) 255, 299, 384, 819
Hsp92II CATG 7 cut(s) 22, 307, 317, 488, 569, 760, 1091
HspAI GCGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 937
LmnI GCTCC 4 cut(s) 13, 239, 561, 610
Lsp1109I GCAGC 3 cut(s) 739, 819, 1118
LweI GCATC 3 cut(s) 183, 1093, 1275
MaeI CTAG 4 cut(s) 32, 602, 996, 1185
MaeIII GTNAC 4 cut(s) 269, 552, 1003, 1157
MflI RGATCY 2 cut(s) 457, 952
MhlI GDGCHC 2 cut(s) 236, 582
MlsI TGGCCA 1 cut(s) 761
MluCI AATT 8 cut(s) 80, 159, 465, 681, 794, 1024, 1145, 1327
MluNI TGGCCA 1 cut(s) 761
MlyI GAGTC 3 cut(s) 351, 1252, 1412
Mox20I TGGCCA 1 cut(s) 761
MscI TGGCCA 1 cut(s) 761
MseI TTAA 3 cut(s) 336, 408, 1251
Msp20I TGGCCA 1 cut(s) 761
MspA1I CMGCKG 1 cut(s) 1265
MspR9I CCNGG 1 cut(s) 726
MvaI CCWGG 1 cut(s) 726
MwoI GCNNNNNNNGC 6 cut(s) 193, 212, 532, 758, 1271, 1285
NcoI CCATGG 1 cut(s) 756
NlaIII CATG 7 cut(s) 22, 307, 317, 488, 569, 760, 1091
NlaIV GGNNCC 6 cut(s) 37, 49, 563, 612, 954, 969
NmuCI GTSAC 3 cut(s) 269, 552, 1003
NsbI TGCGCA 1 cut(s) 197
NspI RCATGY 1 cut(s) 22
NspV TTCGAA 2 cut(s) 100, 1117
PciI ACATGT 1 cut(s) 18
PfeI GAWTC 3 cut(s) 1114, 1166, 1205
PflMI CCANNNNNTGG 1 cut(s) 731
PkrI GCNGC 4 cut(s) 261, 754, 834, 1108
PleI GAGTC 3 cut(s) 350, 1252, 1411
PpsI GAGTC 3 cut(s) 350, 1252, 1411
PscI ACATGT 1 cut(s) 18
PshAI GACNNNNGTC 1 cut(s) 803
Psp124BI GAGCTC 1 cut(s) 236
Psp6I CCWGG 1 cut(s) 724
PspFI CCCAGC 1 cut(s) 583
PspGI CCWGG 1 cut(s) 724
PspN4I GGNNCC 6 cut(s) 37, 49, 563, 612, 954, 969
PspPI GGNCC 2 cut(s) 470, 719
PstI CTGCAG 1 cut(s) 805
PstNI CAGNNNCTG 1 cut(s) 731
PsuI RGATCY 2 cut(s) 457, 952
PvuII CAGCTG 1 cut(s) 1265
RsaI GTAC 3 cut(s) 119, 425, 730
RsaNI GTAC 3 cut(s) 118, 424, 729
SacI GAGCTC 1 cut(s) 236
SaqAI TTAA 3 cut(s) 336, 408, 1251
SatI GCNGC 4 cut(s) 260, 753, 833, 1107
Sau96I GGNCC 2 cut(s) 470, 719
ScaI AGTACT 1 cut(s) 119
SchI GAGTC 3 cut(s) 351, 1252, 1412
ScrFI CCNGG 1 cut(s) 726
SduI GDGCHC 2 cut(s) 236, 582
SfaNI GCATC 3 cut(s) 183, 1093, 1275
SfcI CTRYAG 1 cut(s) 801
SfuI TTCGAA 2 cut(s) 100, 1117
SmlI CTYRAG 5 cut(s) 229, 263, 1196, 1343, 1374
SmoI CTYRAG 5 cut(s) 229, 263, 1196, 1343, 1374
Sse9I AATT 8 cut(s) 80, 159, 465, 681, 794, 1024, 1145, 1327
SsiI CCGC 2 cut(s) 213, 259
SspMI CTAG 4 cut(s) 32, 602, 996, 1185
SstI GAGCTC 1 cut(s) 236
StyD4I CCNGG 1 cut(s) 724
StyI CCWWGG 3 cut(s) 51, 756, 956
TaqI TCGA 6 cut(s) 100, 111, 840, 857, 870, 1117
TasI AATT 8 cut(s) 80, 159, 465, 681, 794, 1024, 1145, 1327
TatI WGTACW 1 cut(s) 117
TauI GCSGC 1 cut(s) 262
TfiI GAWTC 3 cut(s) 1114, 1166, 1205
Tru1I TTAA 3 cut(s) 336, 408, 1251
Tru9I TTAA 3 cut(s) 336, 408, 1251
TscAI CASTG 3 cut(s) 205, 563, 823
TseFI GTSAC 3 cut(s) 269, 552, 1003
TseI GCWGC 3 cut(s) 752, 832, 1106
Tsp45I GTSAC 3 cut(s) 269, 552, 1003
TspDTI ATGAA 2 cut(s) 330, 1018
TspRI CASTG 3 cut(s) 205, 563, 823
Van91I CCANNNNNTGG 1 cut(s) 731
XapI RAATTY 2 cut(s) 1024, 1327
XceI RCATGY 1 cut(s) 22
XspI CTAG 4 cut(s) 32, 602, 996, 1185
ZrmI AGTACT 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.