Rorug06G0431600

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
56675225 .. 56681576
6352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0431600.1

Sequence Viewer

Length: 3039 bp
ATGACACTCGAAGATTTTTTTACCTTAACTGAGATGAAAGATGGGCTAACTGCTCCATCTCGAGTTGAGGAGCTGGTCACACTAATGCAGAGTGAGAAAGATTCTAGTGTGAATAATGCTGGTGAGGCAACCAGGCATTGGGTTGCAGTTGCAAGCACAATTGCTGCCACAGAGAATAAAGATTGTCTTGATCTTTTCATTCAATTGGATGGACTCTGGTTTGTTGGTAAATGGCTGAAAGATGCTCAAAATTTAGGTAATGATACAAATGAAAGTTTTGTAGAAGAGTCAATAACTGCTCTGTTACTAGCACTTGAAAAGCTGCATATTGACAATAAGAGGTCAATATCTACGGGGATCTGGAGTACTGTTGAGAAACTTCTTGGCCACAAAAGCTTGAGGGTTCAAGATCGAGCAAGACTGCTGTTTGATAGCTGGAAGCAGGATGGTGGTGCAGTTGATGATGTTGAGAATACTGGGGTTCTCTGTGGTGATGAGAGTTCTGAGCTTTCTGCACAAGAGACCAAGCCATCTGCTTTAAATTTTACCCCTTCAGAAGTAGGTTCTAACAGCGAGAATCGCCCATCAGGTACTGCTGATGAAACATTGCCGTTAAGCAGTTCGGAGGGTCTTCAACCAGAAAGTGCTGATGTACAGATTCCAACTTGTAACAAACAGTCCCCAACCGACAAACTTTTAGAGAATGCAGACAAGAAAGATAGGTCTCCAGATCCTTTGGGCTCTGTTATTTTGGAGGCTGTTCAACAAAGTCCTACAAAAAATGAATCCTCCATATGTTCTGTAGGAGCAAATGCTTTAATTGGAACTTCTAATTTTTCTGTGGCAAAGACGAGCAATGCTGATGTGTCAGACAACTCAAAATTGAATGAGATGCCCAGGAATGAAAATCAGAAGCACACAGTTGATGGTTCTCCAAAGAAGTTGGGTGTGACTGACATCTCTTCGGTATCTGCACCATTGGAATCTGGGGTTGTTTGTTCAGATGCTGATGCTGCAACATCCCAGGTTTTTGTTAATGATTCTGCTTTACAAAAAAATGCAGATGCCAATGAGGATGGTTTCTGTCAAAAGTTTGATGCTCTCAGTGGTGATGGACAATACCAGAGCTGTAAATCTGATCCGCAGGTTGTGATGGACAATACAACGGCAGTGATGGATGATACAAGAGCTGTAAATCATTGCAACACTACTGTTCAAGATAGTGACTGTTCGAACATTCCTCAGGAGTCGTCTGGCAATGGTAGTATGTCTGAAAAAGTTGAAGATATAGAGACTTCTTCCAGGATGGATGACCTGGGTGCTGTTGATGAAGATGAAGAGCAAGCAAGTGATGAAGGCGATGAATTGACTACTGCTACTGTTTTTCCTAGCAATATTTTTGAAAAAAGAAGGTCTGATATCGATGTTGAGTATGGGATGGTTGATGCTCTTGAAGTTGCTCGACAGGTTGCCCAAGAAGTAGAAAGAGAAGTGGTGGATCACAGAGAACCATACGGCAGTTCATCTTCTGGGAAAATTTCAGGAGGTGGACTCAGACAACCTGGTAGCCCAGACTCTATAAATGAAAAGCAAGACCCACCCACTGAAGTTGCACCAAAGGATCTGCCAGTTGAGCAATTTCATTCTGTAGAGGCAAATCCTGAGAAGGATGTGGTTGAGTCAGAACATCAGGAAATGATACCTGAACATTCCATTCATGACCAGTCCTCTCAAGTGACTGAAATGGCTCAAGAGCCAGAAGTTAACCCAGAAAAGGGTCTCTGTGGTTTTGATCTAAATGAAGAAGTGAGTTCTGATGAGATGGATCGCTCAGTAAATCCTGTCTCTGCTCCAATTCCTTTTTCCAGACCACCACCAGCTGCTGATCTACCTGTGGCCCCTTTGCAGTTTGAAGGGGCTATTGGATTGAAAGGATCTCTTGGTAATAGTGCTTTTCGTCGAGCATCTCCACGCAGGTTTTCGGATTCTGAGAAGAATCTTTCTACAGGGGCCACCACTGATAGCTCAAAGCAGAGGCCAGACTACCTGTGTTTAGATTTGAATGTTGCTTTTGGAGGAGATGATTTGGAAAAACAAATTCCATTGTCGTCTAGCCTCCCTTCTGGGGAATCTTCAGGGGAAGTGAGTCAAAGTAGATTGGGTAGGCCCAACTTGGATTTGAACCGTATTGATGATGACTGTGATGCTCTACCGTTGAATTTAAGAGTGGAAGGACAGTTCTTGTACAACCGAAATGGCCGTCGCAGCCCATCTCCTGCCTCATCGTCATCATCAATGCAGCCTTTGATGAGGAATTTTGATTTGAATGACAGGCCATTTTTTCATAATGATTCTATTGATCAAGGGCATGGTAAGTCTTCTCAAAGTGCAACTGCATATAGAGGGCAGTTGGATGGTTCAGTTATTTCTATCCTGGGTACCAGAGTAGAGATTAAAAGAAATGATGTTCCTCAAACTCTGTCCCTGCCAAACGGCAAGGGGATTATTGAGACTGCGGGAGATCCTAACTTGGCAAGAGCAGGAAGTCTTTTGGAGTTGGGTTCAAGGGTTTCTTACACCAACTCTCCTGTTTTTGGGTACAATGGACTGGCCACAGGGCCCGCAGTGTCATTCTCCTCAACCATGTATGGACATGGTGGAACAATCCCCTACATGGTGGATTCAAGAGGATCCCCTGTTGTGCCTCAAATTATGGGCTCTGCATCAGCTGTTCCACCTCCGTTCTCTCAGTCACCATTCATCATGAATATGAATGGCGTGCAACCGGGTCTAAATGGTGCTGGGCCGTCGCGTCCCAGTTTCGATCTAAACTCTGGCTTCATGGTTGAGGGTGGCAATAGAGATTCGGGTTTGAGGCACCTTTTCATTCATGGGCAAGGCGGATCTATGGATGAGCATCTGAGGAACAGCTCACAACCCCCTTCTAGTTCTAATGTTGGTGGAAAAAGGAAAGAACCAGAAGGTGGCTGGGAACCTTACCCGTTTAGTTACAGACAACAGCAACCCCCTTGGAGATAG

Protein Analysis

1012

Amino Acids

108.94

Weight (kDa)

4.54

Isoelectric Point (pI)

57.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28580 AT3G28580 AT5G40010
fragaria_vesca FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1135, 1965
Acc65I GGTACC 1 cut(s) 2438
AccB1I GGYRCC 2 cut(s) 2438, 2877
AccB7I CCANNNNNTGG 2 cut(s) 138, 2984
AccII CGCG 1 cut(s) 2812
AciI CCGC 4 cut(s) 1142, 2516, 2622, 2901
AcoI YGGCCR 3 cut(s) 385, 2257, 2610
AcsI RAATTY 6 cut(s) 250, 541, 1536, 2097, 2218, 2314
AcuI CTGAAG 3 cut(s) 537, 1626, 2118
AfaI GTAC 6 cut(s) 367, 592, 654, 2246, 2440, 2600
AfiI CCNNNNNNNGG 7 cut(s) 138, 1774, 1775, 2125, 2594, 2674, 2984
AjnI CCWGG 7 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433
AjuI GAANNNNNNNTTGG 4 cut(s) 1846, 1878, 1905, 1937
AloI GAACNNNNNNTCC 2 cut(s) 2222, 2254
Alw26I GTCTC 6 cut(s) 515, 729, 1286, 1784, 1849, 2504
AlwNI CAGNNNCTG 3 cut(s) 593, 1007, 1883
Ama87I CYCGRG 1 cut(s) 60
ApaI GGGCCC 1 cut(s) 2622
ApeKI GCWGC 6 cut(s) 164, 322, 1013, 1880, 2265, 2299
ApoI RAATTY 6 cut(s) 250, 541, 1536, 2097, 2218, 2314
ArsI GACNNNNNNTTYG 2 cut(s) 2245, 2277
Asp718I GGTACC 1 cut(s) 2438
AspS9I GGNCC 6 cut(s) 1897, 2010, 2166, 2618, 2619, 2804
AsuC2I CCSGG 1 cut(s) 2787
AsuHPI GGTGA 4 cut(s) 134, 503, 1121, 2745
AsuII TTCGAA 1 cut(s) 1232
AvaI CYCGRG 1 cut(s) 60
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 1 cut(s) 2622
BaeI ACNNNNGTAYC 2 cut(s) 2430, 2463
BalI TGGCCA 2 cut(s) 387, 2612
BamHI GGATCC 1 cut(s) 2690
BanI GGYRCC 2 cut(s) 2438, 2877
BanII GRGCYC 3 cut(s) 743, 2622, 2720
BbsI GAAGAC 2 cut(s) 623, 2370
BbvI GCAGC 6 cut(s) 151, 309, 1000, 1867, 2277, 2311
BceAI ACGGC 6 cut(s) 595, 1182, 1531, 2244, 2509, 2791
BciT130I CCWGG 7 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435
BclI TGATCA 1 cut(s) 2359
BcnI CCSGG 1 cut(s) 2787
BcoDI GTCTC 6 cut(s) 515, 729, 1286, 1784, 1849, 2504
BfaI CTAG 5 cut(s) 105, 308, 1389, 2112, 2946
BfmI CTRYAG 3 cut(s) 801, 1647, 2004
BfuAI ACCTGC 2 cut(s) 1135, 1965
BisI GCNGC 6 cut(s) 165, 323, 1014, 1881, 2266, 2300
BlsI GCNGC 6 cut(s) 166, 324, 1015, 1882, 2267, 2301
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 8 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435, 2787
BmeT110I CYCGRG 1 cut(s) 60
BmgT120I GGNCC 6 cut(s) 1897, 2010, 2166, 2618, 2619, 2804
BmiI GGNNCC 7 cut(s) 1899, 2011, 2440, 2620, 2692, 2879, 2994
BmrFI CCNGG 8 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435, 2787
BmrI ACTGGG 2 cut(s) 486, 2811
BmuI ACTGGG 2 cut(s) 486, 2811
BpiI GAAGAC 2 cut(s) 623, 2370
BplI GAGNNNNNCTC 2 cut(s) 1536, 1568
BpmI CTGGAG 2 cut(s) 382, 711
Bpu14I TTCGAA 1 cut(s) 1232
BpuEI CTTGAG 3 cut(s) 418, 1716, 1734
BpuMI CCSGG 1 cut(s) 2787
Bsa29I ATCGAT 1 cut(s) 1422
BsaBI GATNNNNATC 1 cut(s) 2916
BsaI GGTCTC 3 cut(s) 515, 729, 1784
BsaJI CCNNGG 5 cut(s) 896, 1023, 1315, 2434, 3029
BsaXI ACNNNNNCTCC 2 cut(s) 2569, 2599
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 1774, 1775, 2125, 2594, 2674, 2984
Bse1I ACTGG 5 cut(s) 481, 1628, 1723, 2613, 2817
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 4 cut(s) 605, 862, 1198, 1264
Bse8I GATNNNNATC 1 cut(s) 2916
BseBI CCWGG 7 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435
BseCI ATCGAT 1 cut(s) 1422
BseDI CCNNGG 5 cut(s) 896, 1023, 1315, 2434, 3029
BseJI GATNNNNATC 1 cut(s) 2916
BseLI CCNNNNNNNGG 7 cut(s) 138, 1774, 1775, 2125, 2594, 2674, 2984
BseMI GCAATG 4 cut(s) 605, 862, 1198, 1264
BseNI ACTGG 5 cut(s) 481, 1628, 1723, 2613, 2817
BseRI GAGGAG 3 cut(s) 83, 2091, 2626
BseSI GKGCMC 1 cut(s) 2622
BseXI GCAGC 6 cut(s) 151, 309, 1000, 1867, 2277, 2311
BseYI CCCAGC 2 cut(s) 2801, 2988
BsgI GTGCAG 3 cut(s) 474, 498, 957
Bsh1236I CGCG 1 cut(s) 2812
BshNI GGYRCC 2 cut(s) 2438, 2877
BshVI ATCGAT 1 cut(s) 1422
BsiHKCI CYCGRG 1 cut(s) 60
BsiSI CCGG 1 cut(s) 2786
BslFI GGGAC 3 cut(s) 664, 2467, 2799
BslI CCNNNNNNNGG 7 cut(s) 138, 1774, 1775, 2125, 2594, 2674, 2984
BsmAI GTCTC 6 cut(s) 515, 729, 1286, 1784, 1849, 2504
BsmFI GGGAC 3 cut(s) 664, 2467, 2799
BsmI GAATGC 1 cut(s) 709
Bso31I GGTCTC 3 cut(s) 515, 729, 1784
BsoBI CYCGRG 1 cut(s) 60
Bsp119I TTCGAA 1 cut(s) 1232
Bsp120I GGGCCC 1 cut(s) 2618
Bsp1286I GDGCHC 3 cut(s) 743, 2622, 2720
Bsp1407I TGTACA 2 cut(s) 652, 2244
BspACI CCGC 4 cut(s) 1142, 2516, 2622, 2901
BspDI ATCGAT 1 cut(s) 1422
BspFNI CGCG 1 cut(s) 2812
BspHI TCATGA 2 cut(s) 1717, 2763
BspLI GGNNCC 7 cut(s) 1899, 2011, 2440, 2620, 2692, 2879, 2994
BspMI ACCTGC 2 cut(s) 1135, 1965
BspQI GCTCTTC 1 cut(s) 1332
BspT104I TTCGAA 1 cut(s) 1232
BspT107I GGYRCC 2 cut(s) 2438, 2877
BspTNI GGTCTC 3 cut(s) 515, 729, 1784
BsrDI GCAATG 4 cut(s) 605, 862, 1198, 1264
BsrGI TGTACA 2 cut(s) 652, 2244
BsrI ACTGG 5 cut(s) 481, 1628, 1723, 2613, 2817
BssECI CCNNGG 5 cut(s) 896, 1023, 1315, 2434, 3029
BssT1I CCWWGG 1 cut(s) 3029
Bst2UI CCWGG 7 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435
Bst6I CTCTTC 3 cut(s) 279, 967, 1332
BstAUI TGTACA 2 cut(s) 652, 2244
BstBI TTCGAA 1 cut(s) 1232
BstC8I GCNNGC 4 cut(s) 154, 1344, 2622, 2780
BstFNI CGCG 1 cut(s) 2812
BstMAI GTCTC 6 cut(s) 515, 729, 1286, 1784, 1849, 2504
BstMWI GCNNNNNNNGC 6 cut(s) 125, 393, 579, 1013, 1633, 2265
BstNI CCWGG 7 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435
BstSCI CCNGG 8 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433, 2785
BstSFI CTRYAG 3 cut(s) 801, 1647, 2004
BstSLI GKGCMC 1 cut(s) 2622
BstUI CGCG 1 cut(s) 2812
BstV1I GCAGC 6 cut(s) 151, 309, 1000, 1867, 2277, 2311
BstV2I GAAGAC 2 cut(s) 623, 2370
BstX2I RGATCY 7 cut(s) 357, 730, 1621, 1934, 2521, 2690, 2903
BstYI RGATCY 7 cut(s) 357, 730, 1621, 1934, 2521, 2690, 2903
Bsu15I ATCGAT 1 cut(s) 1422
Bsu36I CCTNAGG 1 cut(s) 1242
BsuTUI ATCGAT 1 cut(s) 1422
BtgZI GCGATG 1 cut(s) 1374
BtsI GCAGTG 2 cut(s) 1176, 2631
BtsIMutI CAGTG 5 cut(s) 1111, 1176, 1602, 2016, 2631
BveI ACCTGC 2 cut(s) 1135, 1965
Cac8I GCNNGC 4 cut(s) 154, 1344, 2622, 2780
CaiI CAGNNNCTG 3 cut(s) 593, 1007, 1883
CciI TCATGA 2 cut(s) 1717, 2763
Cfr13I GGNCC 6 cut(s) 1897, 2010, 2166, 2618, 2619, 2804
ClaI ATCGAT 1 cut(s) 1422
CseI GACGC 1 cut(s) 2801
CsiI ACCWGGT 1 cut(s) 1561
Csp6I GTAC 6 cut(s) 366, 591, 653, 2245, 2439, 2599
CspCI CAANNNNNGTGG 2 cut(s) 1591, 1626
CviAII CATG 8 cut(s) 1718, 2369, 2644, 2654, 2674, 2764, 2842, 2891
CviQI GTAC 6 cut(s) 366, 591, 653, 2245, 2439, 2599
DraI TTTAAA 1 cut(s) 540
EaeI YGGCCR 3 cut(s) 385, 2257, 2610
Eam1104I CTCTTC 3 cut(s) 279, 967, 1332
EarI CTCTTC 3 cut(s) 279, 967, 1332
EciI GGCGGA 1 cut(s) 2916
Eco130I CCWWGG 1 cut(s) 3029
Eco24I GRGCYC 3 cut(s) 743, 2622, 2720
Eco31I GGTCTC 3 cut(s) 515, 729, 1784
Eco32I GATATC 1 cut(s) 1420
Eco57I CTGAAG 3 cut(s) 537, 1626, 2118
Eco81I CCTNAGG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 60
EcoO109I RGGNCCY 1 cut(s) 2618
EcoRII CCWGG 7 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433
EcoRV GATATC 1 cut(s) 1420
EcoT14I CCWWGG 1 cut(s) 3029
EcoT38I GRGCYC 3 cut(s) 743, 2622, 2720
ErhI CCWWGG 1 cut(s) 3029
FaeI CATG 8 cut(s) 1721, 2372, 2647, 2657, 2677, 2767, 2845, 2894
FalI AAGNNNNNCTT 6 cut(s) 171, 203, 1923, 1955, 2557, 2589
FaqI GGGAC 3 cut(s) 664, 2467, 2799
FatI CATG 8 cut(s) 1717, 2368, 2643, 2653, 2673, 2763, 2841, 2890
FauI CCCGC 2 cut(s) 2509, 2629
FauNDI CATATG 1 cut(s) 794
FbaI TGATCA 1 cut(s) 2359
Fnu4HI GCNGC 6 cut(s) 165, 323, 1014, 1881, 2266, 2300
FriOI GRGCYC 3 cut(s) 743, 2622, 2720
Fsp4HI GCNGC 6 cut(s) 165, 323, 1014, 1881, 2266, 2300
FspBI CTAG 5 cut(s) 105, 308, 1389, 2112, 2946
GluI GCNGC 6 cut(s) 165, 323, 1014, 1881, 2266, 2300
GsaI CCCAGC 2 cut(s) 2805, 2992
GsuI CTGGAG 2 cut(s) 382, 711
HapII CCGG 1 cut(s) 2786
HgaI GACGC 1 cut(s) 2801
Hin1II CATG 8 cut(s) 1721, 2372, 2647, 2657, 2677, 2767, 2845, 2894
HincII GTYRAC 1 cut(s) 1765
HindII GTYRAC 1 cut(s) 1765
HindIII AAGCTT 1 cut(s) 394
HpaI GTTAAC 1 cut(s) 1765
HpaII CCGG 1 cut(s) 2786
HphI GGTGA 4 cut(s) 134, 503, 1121, 2745
Hpy166II GTNNAC 2 cut(s) 1550, 1765
Hpy8I GTNNAC 2 cut(s) 1550, 1765
Hpy99I CGWCG 3 cut(s) 1962, 2265, 2812
HpyAV CCTTC 9 cut(s) 561, 1349, 1404, 1660, 1907, 2130, 2225, 2952, 2975
HpyF10VI GCNNNNNNNGC 6 cut(s) 125, 393, 579, 1013, 1633, 2265
Hsp92II CATG 8 cut(s) 1721, 2372, 2647, 2657, 2677, 2767, 2845, 2894
KpnI GGTACC 1 cut(s) 2442
Ksp22I TGATCA 1 cut(s) 2359
KspAI GTTAAC 1 cut(s) 1765
LguI GCTCTTC 1 cut(s) 1332
LmnI GCTCC 4 cut(s) 58, 70, 806, 1855
Lsp1109I GCAGC 6 cut(s) 151, 309, 1000, 1867, 2277, 2311
MabI ACCWGGT 1 cut(s) 1561
MaeI CTAG 5 cut(s) 105, 308, 1389, 2112, 2946
MaeIII GTNAC 8 cut(s) 76, 303, 668, 949, 1223, 1735, 2751, 3008
MfeI CAATTG 2 cut(s) 159, 203
MflI RGATCY 7 cut(s) 357, 730, 1621, 1934, 2521, 2690, 2903
MhlI GDGCHC 3 cut(s) 743, 2622, 2720
MlsI TGGCCA 2 cut(s) 387, 2612
MluNI TGGCCA 2 cut(s) 387, 2612
MlyI GAGTC 7 cut(s) 207, 296, 1256, 1545, 1568, 1688, 2155
MmeI TCCRAC 2 cut(s) 686, 2391
Mox20I TGGCCA 2 cut(s) 387, 2612
MscI TGGCCA 2 cut(s) 387, 2612
MseI TTAA 8 cut(s) 26, 539, 614, 818, 1035, 1764, 2222, 2454
MslI CAYNNNNRTG 2 cut(s) 83, 2768
Msp20I TGGCCA 2 cut(s) 387, 2612
MspA1I CMGCKG 2 cut(s) 1880, 2729
MspI CCGG 1 cut(s) 2786
MspR9I CCNGG 8 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435, 2787
MunI CAATTG 2 cut(s) 159, 203
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 7 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435
MvnI CGCG 1 cut(s) 2812
MwoI GCNNNNNNNGC 6 cut(s) 125, 393, 579, 1013, 1633, 2265
NciI CCSGG 1 cut(s) 2787
NdeI CATATG 1 cut(s) 794
NlaIII CATG 8 cut(s) 1721, 2372, 2647, 2657, 2677, 2767, 2845, 2894
NlaIV GGNNCC 7 cut(s) 1899, 2011, 2440, 2620, 2692, 2879, 2994
NmuCI GTSAC 5 cut(s) 76, 949, 1223, 1735, 2751
NspV TTCGAA 1 cut(s) 1232
PaeR7I CTCGAG 1 cut(s) 60
PagI TCATGA 2 cut(s) 1717, 2763
PciSI GCTCTTC 1 cut(s) 1332
PctI GAATGC 1 cut(s) 709
PflMI CCANNNNNTGG 2 cut(s) 138, 2984
PfoI TCCNGGA 1 cut(s) 1301
PkrI GCNGC 6 cut(s) 166, 324, 1015, 1882, 2267, 2301
PleI GAGTC 7 cut(s) 207, 295, 1255, 1545, 1568, 1687, 2154
PpsI GAGTC 7 cut(s) 207, 295, 1255, 1545, 1568, 1687, 2154
Psp6I CCWGG 7 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433
PspFI CCCAGC 2 cut(s) 2801, 2988
PspGI CCWGG 7 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433
PspN4I GGNNCC 7 cut(s) 1899, 2011, 2440, 2620, 2692, 2879, 2994
PspOMI GGGCCC 1 cut(s) 2618
PspPI GGNCC 6 cut(s) 1897, 2010, 2166, 2618, 2619, 2804
PstNI CAGNNNCTG 3 cut(s) 593, 1007, 1883
PsuI RGATCY 7 cut(s) 357, 730, 1621, 1934, 2521, 2690, 2903
PvuII CAGCTG 2 cut(s) 1880, 2729
RsaI GTAC 6 cut(s) 367, 592, 654, 2246, 2440, 2600
RsaNI GTAC 6 cut(s) 366, 591, 653, 2245, 2439, 2599
RseI CAYNNNNRTG 2 cut(s) 83, 2768
SapI GCTCTTC 1 cut(s) 1332
SaqAI TTAA 8 cut(s) 26, 539, 614, 818, 1035, 1764, 2222, 2454
SatI GCNGC 6 cut(s) 165, 323, 1014, 1881, 2266, 2300
Sau96I GGNCC 6 cut(s) 1897, 2010, 2166, 2618, 2619, 2804
ScaI AGTACT 1 cut(s) 367
SchI GAGTC 7 cut(s) 207, 296, 1256, 1545, 1568, 1688, 2155
ScrFI CCNGG 8 cut(s) 133, 898, 1025, 1303, 1316, 1563, 2435, 2787
SduI GDGCHC 3 cut(s) 743, 2622, 2720
SexAI ACCWGGT 1 cut(s) 1561
SfcI CTRYAG 3 cut(s) 801, 1647, 2004
Sfr274I CTCGAG 1 cut(s) 60
SfuI TTCGAA 1 cut(s) 1232
SlaI CTCGAG 1 cut(s) 60
SmiMI CAYNNNNRTG 2 cut(s) 83, 2768
SmlI CTYRAG 4 cut(s) 60, 397, 1731, 1749
SmoI CTYRAG 4 cut(s) 60, 397, 1731, 1749
SsiI CCGC 4 cut(s) 1142, 2516, 2622, 2901
SspI AATATT 1 cut(s) 1396
SspMI CTAG 5 cut(s) 105, 308, 1389, 2112, 2946
StyD4I CCNGG 8 cut(s) 131, 896, 1023, 1301, 1314, 1561, 2433, 2785
StyI CCWWGG 1 cut(s) 3029
TaqI TCGA 8 cut(s) 9, 61, 412, 1232, 1422, 1462, 1960, 2823
TatI WGTACW 3 cut(s) 365, 652, 2244
Tru1I TTAA 8 cut(s) 26, 539, 614, 818, 1035, 1764, 2222, 2454
Tru9I TTAA 8 cut(s) 26, 539, 614, 818, 1035, 1764, 2222, 2454
TscAI CASTG 5 cut(s) 1111, 1176, 1609, 2023, 2631
TseFI GTSAC 5 cut(s) 76, 949, 1223, 1735, 2751
TseI GCWGC 6 cut(s) 164, 322, 1013, 1880, 2265, 2299
Tsp45I GTSAC 5 cut(s) 76, 949, 1223, 1735, 2751
TspGWI ACGGA 1 cut(s) 2730
TspRI CASTG 5 cut(s) 1111, 1176, 1609, 2023, 2631
Van91I CCANNNNNTGG 2 cut(s) 138, 2984
XapI RAATTY 6 cut(s) 250, 541, 1536, 2097, 2218, 2314
XcmI CCANNNNNNNNNTGG 1 cut(s) 2985
XhoI CTCGAG 1 cut(s) 60
XspI CTAG 5 cut(s) 105, 308, 1389, 2112, 2946
ZrmI AGTACT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.