Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

4930447 .. 4931676

Gene Structure 1230 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00082050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGCGCAGTGAAGCCTATTCCGCCATTGAGAACTACTTGAGCTCCAAGTCTTCCACACAAGCTAAGCGGCTCAAGGGTGACATCAAGAACAATCAGTCTCTTGTTCTGAGCATGGATGACCATGAAGAAGTTGCTGATGAGTTTAAAGGAGTCCAAGTCTGGTGGGCATCTGGTAAGAACATATCAAAATCTCAGACATTTTCTTACATCCCGGTTAATGATGAGAAAAGGTACTACAAGCTCACTTTCCACAAAAGAAAGAGGGATCTCATAATTGGGCCTTACTTGGCTCATGTTTTGAAAGAGGGTAATGCTATAAAAGTGAGGAACAGGCAAAGGAAGCTTTATACTAATAATGGGTCACATTGGAGCCATGTGGTTTTTGAGCACCCAGCAACATTTCAGACACTAGCTATGGAGCCAGAGAAGAAGAAGGACATCATTGAGGACTTGATGGCATTTAGCAAAGCTGAAGAGTTCTATACAAGAATTGGGAGAGCTTGGAAAAGAGGGTATCTACTTTATGGCCCTCCAGGTACTGGGAAATCCACAATGATTGCTGCCATGGCCAATCTCTTGGGGTATGATCTCTATGATCTTGAATTGACTGCAGTCAAGGACAACACTGAGCTGAGGAGGCTGCTGATCGAAACATCAAGCAAGTCGATCATCGTAATTGAAGACATTGATTGCTCACTTGATCTCACAGGCCAAAGGAGGAAGCAGAGAAAGGACAGAGGGGATGATCAGGAAGAGAAGGATCCAAGGGAGAAGGTTCCTAAAGAAGAAAGGGAAAGCAAGCCTAGTCAGGTCACTCTTTCTGGGCTTCTGAATTTCATTGATGGGTTGTGGTCAGCTTGTAGAGGAGAGAGGCTTATAGTATTCACAACTAATCATGTTGAAAAACTTGATGCAGCATTGATTCGAAAGGGAAGGATGGACAAGCATATAGAATTGTCATATTGTAACTTTGAATCATTCAAGGTGTTGGCTAGGAACTACCTCAAGCTTGAATCACACACTCTGTTTCCCACAATCTGTGATTTGCTGGCTGAAGTTAATATGACTCCAGCTGATGTAGCAGAGCATTTGATGCCCAAGACACTTTCTGGGGATGTTGAAATCTGCCTGAAGAATTTGATTGAAGCTCTTGAGGATGAGAAAGAGAAGAAACCATCAACTCAAGTGGAAGCAAAAGATCAGGACAATGAGTCATCAGATAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

409

Amino Acids

46.95

Weight (kDa)

7.15

Isoelectric Point (pI)

39.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	2 - 57	3.6e-17	Domain associated at C-terminal with AAA
AAA	PF00004	172 - 320	7.6e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	322 - 392	5e-30	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	5
AccB7I	CCANNNNNTGG	1 cut(s)	539
AciI	CCGC	2 cut(s)	21, 67
AclWI	GGATC	3 cut(s)	273, 755, 768
AcoI	YGGCCR	1 cut(s)	567
AcsI	RAATTY	2 cut(s)	832, 1135
AcuI	CTGAAG	3 cut(s)	492, 1074, 1151
AfaI	GTAC	2 cut(s)	233, 538
AfiI	CCNNNNNNNGG	1 cut(s)	539
AgsI	TTSAA	9 cut(s)	301, 602, 680, 902, 974, 982, 1013, 1121, 1145
AhdI	GACNNNNNGTC	1 cut(s)	1210
AjnI	CCWGG	1 cut(s)	532
Alw21I	GWGCWC	2 cut(s)	44, 390
Alw26I	GTCTC	1 cut(s)	102
AlwI	GGATC	3 cut(s)	273, 755, 768
AlwNI	CAGNNNCTG	1 cut(s)	539
AoxI	GGCC	4 cut(s)	278, 526, 567, 709
ApeKI	GCWGC	3 cut(s)	560, 640, 914
ApoI	RAATTY	2 cut(s)	832, 1135
AspLEI	GCGC	1 cut(s)	6
AspS9I	GGNCC	2 cut(s)	278, 527
AsuC2I	CCSGG	1 cut(s)	212
AsuHPI	GGTGA	1 cut(s)	89
AsuII	TTCGAA	1 cut(s)	925
BalI	TGGCCA	1 cut(s)	569
BamHI	GGATCC	1 cut(s)	760
BanII	GRGCYC	1 cut(s)	44
BbsI	GAAGAC	2 cut(s)	42, 687
Bbv12I	GWGCWC	2 cut(s)	44, 390
BbvCI	CCTCAGC	1 cut(s)	632
BbvI	GCAGC	3 cut(s)	547, 627, 926
BccI	CCATC	4 cut(s)	448, 836, 931, 1183
BciT130I	CCWGG	1 cut(s)	534
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	212
BcoDI	GTCTC	1 cut(s)	102
BfaI	CTAG	3 cut(s)	410, 804, 993
BfmI	CTRYAG	1 cut(s)	609
BisI	GCNGC	4 cut(s)	68, 561, 641, 915
BlpI	GCTNAGC	1 cut(s)	63
BlsI	GCNGC	4 cut(s)	69, 562, 642, 916
Bme1390I	CCNGG	2 cut(s)	212, 534
BmeRI	GACNNNNNGTC	1 cut(s)	1210
BmgT120I	GGNCC	2 cut(s)	278, 527
BmiI	GGNNCC	4 cut(s)	371, 420, 762, 777
BmrFI	CCNGG	2 cut(s)	212, 534
BmrI	ACTGGG	1 cut(s)	549
BmsI	GCATC	3 cut(s)	176, 901, 1083
BmuI	ACTGGG	1 cut(s)	549
BoxI	GACNNNNGTC	1 cut(s)	611
BpiI	GAAGAC	2 cut(s)	42, 687
BpmI	CTGGAG	2 cut(s)	516, 1053
Bpu10I	CCTNAGC	1 cut(s)	632
Bpu1102I	GCTNAGC	1 cut(s)	63
Bpu14I	TTCGAA	1 cut(s)	925
BpuEI	CTTGAG	5 cut(s)	56, 58, 989, 1167, 1172
BpuMI	CCSGG	1 cut(s)	212
BsaJI	CCNNGG	2 cut(s)	564, 764
BsaXI	ACNNNNNCTCC	4 cut(s)	26, 56, 141, 171
Bsc4I	CCNNNNNNNGG	1 cut(s)	539
Bse1I	ACTGG	1 cut(s)	544
BseBI	CCWGG	1 cut(s)	534
BseDI	CCNNGG	2 cut(s)	564, 764
BseGI	GGATG	6 cut(s)	121, 207, 748, 942, 1120, 1162
BseLI	CCNNNNNNNGG	1 cut(s)	539
BseMII	CTCAG	4 cut(s)	98, 206, 618, 623
BseNI	ACTGG	1 cut(s)	544
BseRI	GAGGAG	2 cut(s)	649, 879
BseXI	GCAGC	3 cut(s)	547, 627, 926
BseYI	CCCAGC	1 cut(s)	391
BshFI	GGCC	4 cut(s)	280, 528, 569, 711
BsiHKAI	GWGCWC	2 cut(s)	44, 390
BsiSI	CCGG	1 cut(s)	212
BslI	CCNNNNNNNGG	1 cut(s)	539
BsmAI	GTCTC	1 cut(s)	102
BsnI	GGCC	4 cut(s)	280, 528, 569, 711
Bsp119I	TTCGAA	1 cut(s)	925
Bsp1286I	GDGCHC	2 cut(s)	44, 390
Bsp143I	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
Bsp1720I	GCTNAGC	1 cut(s)	63
Bsp19I	CCATGG	1 cut(s)	564
BspACI	CCGC	2 cut(s)	21, 67
BspANI	GGCC	4 cut(s)	280, 528, 569, 711
BspCNI	CTCAG	4 cut(s)	99, 205, 619, 624
BspLI	GGNNCC	4 cut(s)	371, 420, 762, 777
BspMAI	CTGCAG	1 cut(s)	613
BspPI	GGATC	3 cut(s)	273, 755, 768
BspT104I	TTCGAA	1 cut(s)	925
BsrI	ACTGG	1 cut(s)	544
BssECI	CCNNGG	2 cut(s)	564, 764
BssMI	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
BssT1I	CCWWGG	2 cut(s)	564, 764
Bst2UI	CCWGG	1 cut(s)	534
Bst6I	CTCTTC	2 cut(s)	468, 747
BstAPI	GCANNNNNTGC	1 cut(s)	1093
BstBI	TTCGAA	1 cut(s)	925
BstC8I	GCNNGC	2 cut(s)	800, 1050
BstDEI	CTNAG	5 cut(s)	63, 107, 192, 627, 632
BstDSI	CCRYGG	1 cut(s)	564
BstF5I	GGATG	6 cut(s)	121, 207, 748, 942, 1120, 1162
BstHHI	GCGC	1 cut(s)	6
BstKTI	GATC	9 cut(s)	268, 589, 598, 648, 669, 703, 748, 763, 1201
BstMAI	GTCTC	1 cut(s)	102
BstMBI	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
BstMWI	GCNNNNNNNGC	6 cut(s)	20, 340, 566, 637, 1079, 1093
BstNI	CCWGG	1 cut(s)	534
BstPAI	GACNNNNGTC	1 cut(s)	611
BstSCI	CCNGG	2 cut(s)	210, 532
BstSFI	CTRYAG	1 cut(s)	609
BstV1I	GCAGC	3 cut(s)	547, 627, 926
BstV2I	GAAGAC	2 cut(s)	42, 687
BstX2I	RGATCY	2 cut(s)	265, 760
BstXI	CCANNNNNNTGG	1 cut(s)	577
BstYI	RGATCY	2 cut(s)	265, 760
BsuRI	GGCC	4 cut(s)	280, 528, 569, 711
BtgI	CCRYGG	1 cut(s)	564
BtsCI	GGATG	6 cut(s)	121, 207, 748, 942, 1120, 1162
BtsI	GCAGTG	1 cut(s)	13
BtsIMutI	CAGTG	2 cut(s)	13, 624
Cac8I	GCNNGC	2 cut(s)	800, 1050
CaiI	CAGNNNCTG	1 cut(s)	539
CfoI	GCGC	1 cut(s)	6
Cfr13I	GGNCC	2 cut(s)	278, 527
Csp6I	GTAC	2 cut(s)	232, 537
CspCI	CAANNNNNGTGG	6 cut(s)	143, 178, 538, 573, 1167, 1202
CviAII	CATG	6 cut(s)	112, 122, 293, 374, 565, 896
CviQI	GTAC	2 cut(s)	232, 537
DdeI	CTNAG	5 cut(s)	63, 107, 192, 627, 632
DpnI	GATC	9 cut(s)	267, 588, 597, 647, 668, 702, 747, 762, 1200
DpnII	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
DraI	TTTAAA	1 cut(s)	145
DriI	GACNNNNNGTC	1 cut(s)	1210
EaeI	YGGCCR	1 cut(s)	567
Eam1104I	CTCTTC	2 cut(s)	468, 747
Eam1105I	GACNNNNNGTC	1 cut(s)	1210
EarI	CTCTTC	2 cut(s)	468, 747
EciI	GGCGGA	1 cut(s)	10
Ecl136II	GAGCTC	1 cut(s)	42
Eco130I	CCWWGG	2 cut(s)	564, 764
Eco24I	GRGCYC	1 cut(s)	44
Eco53kI	GAGCTC	1 cut(s)	42
Eco57I	CTGAAG	3 cut(s)	492, 1074, 1151
EcoICRI	GAGCTC	1 cut(s)	42
EcoRII	CCWGG	1 cut(s)	532
EcoT14I	CCWWGG	2 cut(s)	564, 764
EcoT38I	GRGCYC	1 cut(s)	44
ErhI	CCWWGG	2 cut(s)	564, 764
FaeI	CATG	6 cut(s)	115, 125, 296, 377, 568, 899
FatI	CATG	6 cut(s)	111, 121, 292, 373, 564, 895
FbaI	TGATCA	1 cut(s)	745
Fnu4HI	GCNGC	4 cut(s)	68, 561, 641, 915
FokI	GGATG	6 cut(s)	128, 194, 755, 949, 1127, 1169
FriOI	GRGCYC	1 cut(s)	44
Fsp4HI	GCNGC	4 cut(s)	68, 561, 641, 915
FspBI	CTAG	3 cut(s)	410, 804, 993
FspI	TGCGCA	1 cut(s)	5
GlaI	GCGC	1 cut(s)	5
GluI	GCNGC	4 cut(s)	68, 561, 641, 915
GsaI	CCCAGC	1 cut(s)	395
GsuI	CTGGAG	2 cut(s)	516, 1053
HaeIII	GGCC	4 cut(s)	280, 528, 569, 711
HapII	CCGG	1 cut(s)	212
HhaI	GCGC	1 cut(s)	6
Hin1II	CATG	6 cut(s)	115, 125, 296, 377, 568, 899
Hin6I	GCGC	1 cut(s)	4
HinP1I	GCGC	1 cut(s)	4
HindIII	AAGCTT	2 cut(s)	341, 1007
HinfI	GANTC	6 cut(s)	150, 922, 974, 1013, 1066, 1211
HpaII	CCGG	1 cut(s)	212
HphI	GGTGA	1 cut(s)	89
Hpy188I	TCNGA	5 cut(s)	108, 195, 405, 831, 1219
Hpy188III	TCNNGA	5 cut(s)	85, 599, 749, 1151, 1202
HpyAV	CCTTC	4 cut(s)	427, 751, 766, 927
HpyCH4V	TGCA	2 cut(s)	611, 914
HpyF10VI	GCNNNNNNNGC	6 cut(s)	20, 340, 566, 637, 1079, 1093
HpyF3I	CTNAG	5 cut(s)	63, 107, 192, 627, 632
Hsp92II	CATG	6 cut(s)	115, 125, 296, 377, 568, 899
HspAI	GCGC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	745
Kzo9I	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
LmnI	GCTCC	3 cut(s)	47, 369, 418
Lsp1109I	GCAGC	3 cut(s)	547, 627, 926
LweI	GCATC	3 cut(s)	176, 901, 1083
MaeI	CTAG	3 cut(s)	410, 804, 993
MaeIII	GTNAC	4 cut(s)	77, 360, 811, 965
MalI	GATC	9 cut(s)	267, 588, 597, 647, 668, 702, 747, 762, 1200
MboI	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
MflI	RGATCY	2 cut(s)	265, 760
MhlI	GDGCHC	2 cut(s)	44, 390
MlsI	TGGCCA	1 cut(s)	569
MluCI	AATT	7 cut(s)	273, 489, 602, 675, 832, 953, 1135
MluNI	TGGCCA	1 cut(s)	569
MlyI	GAGTC	3 cut(s)	159, 1060, 1220
Mox20I	TGGCCA	1 cut(s)	569
MscI	TGGCCA	1 cut(s)	569
MseI	TTAA	3 cut(s)	144, 216, 1059
Msp20I	TGGCCA	1 cut(s)	569
MspA1I	CMGCKG	1 cut(s)	1073
MspI	CCGG	1 cut(s)	212
MspR9I	CCNGG	2 cut(s)	212, 534
MvaI	CCWGG	1 cut(s)	534
MwoI	GCNNNNNNNGC	6 cut(s)	20, 340, 566, 637, 1079, 1093
NciI	CCSGG	1 cut(s)	212
NcoI	CCATGG	1 cut(s)	564
NdeII	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
NlaIII	CATG	6 cut(s)	115, 125, 296, 377, 568, 899
NlaIV	GGNNCC	4 cut(s)	371, 420, 762, 777
NmuCI	GTSAC	3 cut(s)	77, 360, 811
NsbI	TGCGCA	1 cut(s)	5
NspV	TTCGAA	1 cut(s)	925
PfeI	GAWTC	3 cut(s)	922, 974, 1013
PflMI	CCANNNNNTGG	1 cut(s)	539
PkrI	GCNGC	4 cut(s)	69, 562, 642, 916
PleI	GAGTC	3 cut(s)	158, 1060, 1219
PpsI	GAGTC	3 cut(s)	158, 1060, 1219
PshAI	GACNNNNGTC	1 cut(s)	611
Psp124BI	GAGCTC	1 cut(s)	44
Psp6I	CCWGG	1 cut(s)	532
PspFI	CCCAGC	1 cut(s)	391
PspGI	CCWGG	1 cut(s)	532
PspN4I	GGNNCC	4 cut(s)	371, 420, 762, 777
PspPI	GGNCC	2 cut(s)	278, 527
PstI	CTGCAG	1 cut(s)	613
PstNI	CAGNNNCTG	1 cut(s)	539
PsuI	RGATCY	2 cut(s)	265, 760
PvuII	CAGCTG	1 cut(s)	1073
RsaI	GTAC	2 cut(s)	233, 538
RsaNI	GTAC	2 cut(s)	232, 537
SacI	GAGCTC	1 cut(s)	44
SaqAI	TTAA	3 cut(s)	144, 216, 1059
SatI	GCNGC	4 cut(s)	68, 561, 641, 915
Sau3AI	GATC	9 cut(s)	265, 586, 595, 645, 666, 700, 745, 760, 1198
Sau96I	GGNCC	2 cut(s)	278, 527
SchI	GAGTC	3 cut(s)	159, 1060, 1220
ScrFI	CCNGG	2 cut(s)	212, 534
SduI	GDGCHC	2 cut(s)	44, 390
SfaNI	GCATC	3 cut(s)	176, 901, 1083
SfcI	CTRYAG	1 cut(s)	609
SfuI	TTCGAA	1 cut(s)	925
SmlI	CTYRAG	5 cut(s)	37, 71, 1004, 1151, 1182
SmoI	CTYRAG	5 cut(s)	37, 71, 1004, 1151, 1182
Sse9I	AATT	7 cut(s)	273, 489, 602, 675, 832, 953, 1135
SsiI	CCGC	2 cut(s)	21, 67
SspMI	CTAG	3 cut(s)	410, 804, 993
SstI	GAGCTC	1 cut(s)	44
StyD4I	CCNGG	2 cut(s)	210, 532
StyI	CCWWGG	2 cut(s)	564, 764
TaqI	TCGA	3 cut(s)	648, 665, 925
TasI	AATT	7 cut(s)	273, 489, 602, 675, 832, 953, 1135
TauI	GCSGC	1 cut(s)	70
TfiI	GAWTC	3 cut(s)	922, 974, 1013
Tru1I	TTAA	3 cut(s)	144, 216, 1059
Tru9I	TTAA	3 cut(s)	144, 216, 1059
TscAI	CASTG	2 cut(s)	13, 631
TseFI	GTSAC	3 cut(s)	77, 360, 811
TseI	GCWGC	3 cut(s)	560, 640, 914
Tsp45I	GTSAC	3 cut(s)	77, 360, 811
TspDTI	ATGAA	2 cut(s)	138, 826
TspRI	CASTG	2 cut(s)	13, 631
Van91I	CCANNNNNTGG	1 cut(s)	539
XapI	RAATTY	2 cut(s)	832, 1135
XspI	CTAG	3 cut(s)	410, 804, 993

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.