pycom14g15860

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
18328972 .. 18330558
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g15860.1

Sequence Viewer

Length: 1587 bp
ATGTTGCCACCAACAATGATGAGCCAGCAGATGTGGGCAACAATGGGCTCAACCCTAGCAAGCTTCATGTTCATCTGGGCAATCATCCGCCAGTACTGTCCGTACGAACTCCGCCACTTCCTGGAGCGATACTCCCACAGAGTCACCGGCTACTTCTACCCCTACATCGAAATTTCCATCCACGAGTTCACCGGCGATCGATTCAAGCGAAGCGAGGCCTACTCCGCTGTGGAGGCCTACCTCAGCTCCAACACCTCCAAGAGCGCCAAGCGGCTCAAGGCGGAGATGGTGAAGGACAGCGGCAACCTCATCCTCAGCATGGACGAGTACGAGAGAGCGACGGATGATTTCAGGGGGACCAAAGTCTGGTGGGTTTTGTTCAAATCCGTGTCCCCTGGCGGGAGATCTATGTCCATGGCCTATTATCCCGACCAGGAGAAACGATTTTACAAGTTGACTTTTCACAAAAAGTACCGGGACATAATCACGGTGGACTATTTAAACCATGTCGTTAATGAAGGGAAGGAGATCCGTGTAAGAAATCGGCAGAGGAAGCTGTACACAAATAGTCCGGGGTACAAATGGCCGAGCTACAAGCAGACGATGTGGAGCCACATTGTGTTCGAGCACCCGGCAACGTTTGAGACAATGGCGTTGGATCCGGAGAAGAAGAAGGAGATCATCGAAGATCTGGTGACTTTCAGCAAAAGCAAGGACTTTTATGCAAGGATTGGGAAAGCTTGGAAGAGGGGTTACTTGCTGTACGGTCCTCCGGGGACCGGGAAGTCCACGATGATAGCCGCGATGGCGAATCTGTTGGGGTACGATATTTATGACTTAGAGCTCACCGCAGTGAAGGACAATACGGAGCTGAGGAAGCTTTTGATTGAGACGACGAGTAAGAGTATTATTGTGATCGAGGACATAGACTGTTCGCTTGATTTGACAGGGCAGATGAAGAAGAGGGGGGCGGCGGAGAAGGGTTTTCTGGAGGAGGAGGTGAAAGGTGGAGGAGCCTGGAAGGAGCGGATTAAGGAGCCGAAAGAGGAAGTGTACGGCGGCAGCAGCAAGGTGACGCTTTCGGGGCTGTTGAACTTCATTGATGGGTTATGGTCTGCTTGCGGAGGTGAGAGGCTGGTTGTTTTTACTACTAATTATGTTGAGAAGCTTGATCCAGCATTGATTCGGAGGGGTAGAATGGACAAACACATTGCCCTTTCTTACTGTACTTTTGATGGGTTTAGGGTTTTGGCCAAGAATTACTTGAGGATTGAGAGGCATGAGACGTTTGATGAGATAGAAAAGCTGATGGGAGTGACGAAAATGACCCCGGCCGACGTTGCTGAGAATCTCATGCCAAAGTCACCAAATGATGATCCGGAGAAATGTCTTTTGAATTTTATCCAAGCTCTTGAGGAAGTGAAGGGGGAAGCTGCAAAGAAAAAATATGAGGAGATCAAAGAGATTGATACAAGCAAGGAGGATGAGGTGGCGGTCGAGGAGGAGGAGGGAGGAGGAAACAAAGAGGTTGAAGGTAAGAGAGATTTGGTTGCCAATATAATTAGGGCAGCTAGGGCAAGTGGGTGA

Protein Analysis

529

Amino Acids

60.65

Weight (kDa)

7.58

Isoelectric Point (pI)

46.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 33 - 127 1.6e-24 Domain associated at C-terminal with AAA
AAA PF00004 252 - 314 5.8e-09 ATPase family associated with various cellular activities (AAA)
AAA PF00004 352 - 407 6.6e-06 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 409 - 481 9.7e-32 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28580 AT3G28580 AT5G40010
fragaria_vesca FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 784
AccB7I CCANNNNNTGG 2 cut(s) 121, 366
AccBSI CCGCTC 1 cut(s) 1027
AccII CGCG 1 cut(s) 803
AccIII TCCGGA 2 cut(s) 661, 1378
AclI AACGTT 1 cut(s) 638
AclWI GGATC 5 cut(s) 523, 653, 666, 1166, 1370
AcoI YGGCCR 3 cut(s) 584, 1251, 1332
AcsI RAATTY 2 cut(s) 171, 1396
AdeI CACNNNGTG 1 cut(s) 619
AfiI CCNNNNNNNGG 5 cut(s) 121, 319, 366, 399, 779
AgsI TTSAA 5 cut(s) 205, 382, 1093, 1396, 1532
AjnI CCWGG 4 cut(s) 120, 394, 432, 1016
AleI CACNNNNGTG 1 cut(s) 851
Alw21I GWGCWC 2 cut(s) 630, 846
Alw26I GTCTC 3 cut(s) 638, 884, 1277
AlwI GGATC 5 cut(s) 523, 653, 666, 1166, 1370
Aor13HI TCCGGA 2 cut(s) 661, 1378
AoxI GGCC 6 cut(s) 216, 234, 417, 584, 1251, 1332
ApeKI GCWGC 4 cut(s) 1062, 1065, 1433, 1568
ApoI RAATTY 2 cut(s) 171, 1396
AspLEI GCGC 1 cut(s) 266
AspS9I GGNCC 3 cut(s) 357, 767, 777
AsuC2I CCSGG 6 cut(s) 476, 573, 632, 774, 781, 1331
AsuHPI GGTGA 9 cut(s) 136, 181, 301, 706, 838, 1012, 1084, 1139, 1356
AvaII GGWCC 3 cut(s) 357, 767, 777
BalI TGGCCA 1 cut(s) 1253
BamHI GGATCC 1 cut(s) 658
BanII GRGCYC 2 cut(s) 50, 846
BarI GAAGNNNNNNTAC 2 cut(s) 737, 769
BauI CACGAG 1 cut(s) 182
Bbv12I GWGCWC 2 cut(s) 630, 846
BbvCI CCTCAGC 3 cut(s) 242, 314, 872
BbvI GCAGC 4 cut(s) 1074, 1077, 1420, 1580
BccI CCATC 6 cut(s) 185, 280, 799, 1097, 1229, 1303
BceAI ACGGC 1 cut(s) 1072
BciT130I CCWGG 4 cut(s) 122, 396, 434, 1018
BcnI CCSGG 6 cut(s) 476, 573, 632, 774, 781, 1331
BcoDI GTCTC 3 cut(s) 638, 884, 1277
BfaI CTAG 2 cut(s) 56, 1572
BfoI RGCGCY 1 cut(s) 267
BglI GCCNNNNNGGC 1 cut(s) 806
BglII AGATCT 2 cut(s) 404, 688
BisI GCNGC 9 cut(s) 272, 301, 801, 972, 1060, 1063, 1066, 1434, 1569
BlsI GCNGC 9 cut(s) 273, 302, 802, 973, 1061, 1064, 1067, 1435, 1570
BmcAI AGTACT 1 cut(s) 95
Bme18I GGWCC 3 cut(s) 357, 767, 777
BmgT120I GGNCC 3 cut(s) 357, 767, 777
BmiI GGNNCC 6 cut(s) 358, 611, 660, 778, 1015, 1038
BoxI GACNNNNGTC 1 cut(s) 362
BplI GAGNNNNNCTC 4 cut(s) 116, 148, 206, 238
BpmI CTGGAG 2 cut(s) 143, 1010
Bpu10I CCTNAGC 3 cut(s) 242, 314, 872
BpuEI CTTGAG 3 cut(s) 260, 1285, 1433
BpuMI CCSGG 6 cut(s) 476, 573, 632, 774, 781, 1331
Bsa29I ATCGAT 1 cut(s) 199
BsaJI CCNNGG 5 cut(s) 394, 414, 572, 773, 1329
BsaWI WCCGGW 2 cut(s) 661, 1378
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 319, 366, 399, 779
Bse118I RCCGGY 2 cut(s) 146, 191
Bse1I ACTGG 1 cut(s) 91
Bse3DI GCAATG 1 cut(s) 1209
BseAI TCCGGA 2 cut(s) 661, 1378
BseBI CCWGG 4 cut(s) 122, 396, 434, 1018
BseCI ATCGAT 1 cut(s) 199
BseDI CCNNGG 5 cut(s) 394, 414, 572, 773, 1329
BseGI GGATG 5 cut(s) 84, 177, 309, 349, 1489
BseLI CCNNNNNNNGG 5 cut(s) 121, 319, 366, 399, 779
BseMI GCAATG 1 cut(s) 1209
BseMII CTCAG 4 cut(s) 256, 328, 863, 1335
BseNI ACTGG 1 cut(s) 91
BseRI GAGGAG 8 cut(s) 1007, 1010, 1026, 1466, 1514, 1517, 1520, 1527
BseX3I CGGCCG 1 cut(s) 1332
BseXI GCAGC 4 cut(s) 1074, 1077, 1420, 1580
Bsh1236I CGCG 1 cut(s) 803
Bsh1285I CGRYCG 3 cut(s) 199, 1335, 1497
BshFI GGCC 6 cut(s) 218, 236, 419, 586, 1253, 1334
BshVI ATCGAT 1 cut(s) 199
BsiEI CGRYCG 3 cut(s) 199, 1335, 1497
BsiHKAI GWGCWC 2 cut(s) 630, 846
BsiWI CGTACG 1 cut(s) 102
BslFI GGGAC 4 cut(s) 370, 376, 491, 790
BslI CCNNNNNNNGG 5 cut(s) 121, 319, 366, 399, 779
BsmAI GTCTC 3 cut(s) 638, 884, 1277
BsmBI CGTCTC 2 cut(s) 884, 1277
BsmFI GGGAC 4 cut(s) 370, 376, 491, 790
BsnI GGCC 6 cut(s) 218, 236, 419, 586, 1253, 1334
Bsp1286I GDGCHC 3 cut(s) 50, 630, 846
Bsp13I TCCGGA 2 cut(s) 661, 1378
Bsp1407I TGTACA 1 cut(s) 558
Bsp19I CCATGG 1 cut(s) 414
BspANI GGCC 6 cut(s) 218, 236, 419, 586, 1253, 1334
BspCNI CTCAG 4 cut(s) 255, 327, 864, 1336
BspDI ATCGAT 1 cut(s) 199
BspEI TCCGGA 2 cut(s) 661, 1378
BspFNI CGCG 1 cut(s) 803
BspLI GGNNCC 6 cut(s) 358, 611, 660, 778, 1015, 1038
BspPI GGATC 5 cut(s) 523, 653, 666, 1166, 1370
BsrBI CCGCTC 1 cut(s) 1027
BsrDI GCAATG 1 cut(s) 1209
BsrFI RCCGGY 2 cut(s) 146, 191
BsrGI TGTACA 1 cut(s) 558
BsrI ACTGG 1 cut(s) 91
BssAI RCCGGY 2 cut(s) 146, 191
BssECI CCNNGG 5 cut(s) 394, 414, 572, 773, 1329
BssSI CACGAG 1 cut(s) 182
BssT1I CCWWGG 1 cut(s) 414
Bst2BI CACGAG 1 cut(s) 182
Bst2UI CCWGG 4 cut(s) 122, 396, 434, 1018
Bst4CI ACNGT 5 cut(s) 98, 490, 767, 932, 1226
Bst6I CTCTTC 2 cut(s) 740, 956
BstAUI TGTACA 1 cut(s) 558
BstC8I GCNNGC 3 cut(s) 26, 61, 1120
BstDEI CTNAG 5 cut(s) 242, 314, 838, 872, 1344
BstDSI CCRYGG 1 cut(s) 414
BstF5I GGATG 5 cut(s) 84, 177, 309, 349, 1489
BstFNI CGCG 1 cut(s) 803
BstH2I RGCGCY 1 cut(s) 267
BstHHI GCGC 1 cut(s) 266
BstMAI GTCTC 3 cut(s) 638, 884, 1277
BstMCI CGRYCG 3 cut(s) 199, 1335, 1497
BstMWI GCNNNNNNNGC 9 cut(s) 224, 233, 553, 806, 877, 1065, 1084, 1340, 1574
BstNI CCWGG 4 cut(s) 122, 396, 434, 1018
BstPAI GACNNNNGTC 1 cut(s) 362
BstUI CGCG 1 cut(s) 803
BstV1I GCAGC 4 cut(s) 1074, 1077, 1420, 1580
BstX2I RGATCY 4 cut(s) 404, 528, 658, 688
BstYI RGATCY 4 cut(s) 404, 528, 658, 688
BstZI CGGCCG 1 cut(s) 1332
Bsu15I ATCGAT 1 cut(s) 199
BsuRI GGCC 6 cut(s) 218, 236, 419, 586, 1253, 1334
BsuTUI ATCGAT 1 cut(s) 199
BtgI CCRYGG 1 cut(s) 414
BtgZI GCGATG 1 cut(s) 818
BtsCI GGATG 5 cut(s) 84, 177, 309, 349, 1489
BtsI GCAGTG 1 cut(s) 858
BtsIMutI CAGTG 1 cut(s) 858
Cac8I GCNNGC 3 cut(s) 26, 61, 1120
CfoI GCGC 1 cut(s) 266
Cfr10I RCCGGY 2 cut(s) 146, 191
Cfr13I GGNCC 3 cut(s) 357, 767, 777
ClaI ATCGAT 1 cut(s) 199
CseI GACGC 1 cut(s) 1084
CviAII CATG 6 cut(s) 67, 319, 415, 506, 1280, 1354
DdeI CTNAG 5 cut(s) 242, 314, 838, 872, 1344
DraI TTTAAA 1 cut(s) 501
DraIII CACNNNGTG 1 cut(s) 619
DrdI GACNNNNNNGTC 1 cut(s) 784
DseDI GACNNNNNNGTC 1 cut(s) 784
EaeI YGGCCR 3 cut(s) 584, 1251, 1332
EagI CGGCCG 1 cut(s) 1332
Eam1104I CTCTTC 2 cut(s) 740, 956
EarI CTCTTC 2 cut(s) 740, 956
EciI GGCGGA 4 cut(s) 77, 101, 296, 989
Ecl136II GAGCTC 1 cut(s) 844
EclXI CGGCCG 1 cut(s) 1332
Eco130I CCWWGG 1 cut(s) 414
Eco147I AGGCCT 2 cut(s) 218, 236
Eco24I GRGCYC 2 cut(s) 50, 846
Eco47I GGWCC 3 cut(s) 357, 767, 777
Eco52I CGGCCG 1 cut(s) 1332
Eco53kI GAGCTC 1 cut(s) 844
EcoICRI GAGCTC 1 cut(s) 844
EcoRII CCWGG 4 cut(s) 120, 394, 432, 1016
EcoT14I CCWWGG 1 cut(s) 414
EcoT38I GRGCYC 2 cut(s) 50, 846
ErhI CCWWGG 1 cut(s) 414
Esp3I CGTCTC 2 cut(s) 884, 1277
FaeI CATG 6 cut(s) 70, 322, 418, 509, 1283, 1357
FalI AAGNNNNNCTT 2 cut(s) 1247, 1279
FaqI GGGAC 4 cut(s) 370, 376, 491, 790
FatI CATG 6 cut(s) 66, 318, 414, 505, 1279, 1353
FauI CCCGC 1 cut(s) 392
Fnu4HI GCNGC 9 cut(s) 272, 301, 801, 972, 1060, 1063, 1066, 1434, 1569
FokI GGATG 5 cut(s) 71, 164, 296, 356, 1496
FriOI GRGCYC 2 cut(s) 50, 846
Fsp4HI GCNGC 9 cut(s) 272, 301, 801, 972, 1060, 1063, 1066, 1434, 1569
FspBI CTAG 2 cut(s) 56, 1572
GlaI GCGC 1 cut(s) 265
GluI GCNGC 9 cut(s) 272, 301, 801, 972, 1060, 1063, 1066, 1434, 1569
GsuI CTGGAG 2 cut(s) 143, 1010
HaeII RGCGCY 1 cut(s) 267
HaeIII GGCC 6 cut(s) 218, 236, 419, 586, 1253, 1334
HgaI GACGC 1 cut(s) 1084
HhaI GCGC 1 cut(s) 266
Hin1II CATG 6 cut(s) 70, 322, 418, 509, 1283, 1357
Hin6I GCGC 1 cut(s) 264
HinP1I GCGC 1 cut(s) 264
HincII GTYRAC 1 cut(s) 456
HindII GTYRAC 1 cut(s) 456
HindIII AAGCTT 4 cut(s) 61, 738, 878, 1166
HinfI GANTC 5 cut(s) 141, 201, 811, 1183, 1348
HphI GGTGA 9 cut(s) 136, 181, 301, 706, 838, 1012, 1084, 1139, 1356
Hpy166II GTNNAC 6 cut(s) 189, 456, 493, 561, 789, 1054
Hpy188I TCNGA 1 cut(s) 1188
Hpy188III TCNNGA 5 cut(s) 428, 662, 989, 1379, 1412
Hpy8I GTNNAC 6 cut(s) 189, 456, 493, 561, 789, 1054
Hpy99I CGWCG 3 cut(s) 343, 898, 1340
HpyAV CCTTC 9 cut(s) 286, 512, 517, 667, 850, 973, 1015, 1417, 1526
HpyCH4III ACNGT 5 cut(s) 98, 490, 767, 932, 1226
HpyCH4IV ACGT 3 cut(s) 638, 1286, 1338
HpyCH4V TGCA 2 cut(s) 725, 1436
HpyF10VI GCNNNNNNNGC 9 cut(s) 224, 233, 553, 806, 877, 1065, 1084, 1340, 1574
HpyF3I CTNAG 5 cut(s) 242, 314, 838, 872, 1344
HpySE526I ACGT 3 cut(s) 638, 1286, 1338
Hsp92II CATG 6 cut(s) 70, 322, 418, 509, 1283, 1357
HspAI GCGC 1 cut(s) 264
Kpn2I TCCGGA 2 cut(s) 661, 1378
LmnI GCTCC 7 cut(s) 124, 251, 609, 868, 1013, 1024, 1036
Lsp1109I GCAGC 4 cut(s) 1074, 1077, 1420, 1580
MaeI CTAG 2 cut(s) 56, 1572
MaeII ACGT 3 cut(s) 638, 1286, 1338
MaeIII GTNAC 6 cut(s) 142, 694, 752, 1072, 1315, 1362
MbiI CCGCTC 1 cut(s) 1027
MboII GAAGA 6 cut(s) 679, 682, 698, 757, 970, 973
MflI RGATCY 4 cut(s) 404, 528, 658, 688
MhlI GDGCHC 3 cut(s) 50, 630, 846
MlsI TGGCCA 1 cut(s) 1253
MluCI AATT 5 cut(s) 171, 1153, 1258, 1396, 1560
MluNI TGGCCA 1 cut(s) 1253
MlyI GAGTC 1 cut(s) 150
MmeI TCCRAC 2 cut(s) 273, 636
Mox20I TGGCCA 1 cut(s) 1253
MroI TCCGGA 2 cut(s) 661, 1378
MscI TGGCCA 1 cut(s) 1253
MseI TTAA 3 cut(s) 500, 513, 1032
MslI CAYNNNNRTG 1 cut(s) 851
Msp20I TGGCCA 1 cut(s) 1253
MspA1I CMGCKG 2 cut(s) 227, 300
MvaI CCWGG 4 cut(s) 122, 396, 434, 1018
MvnI CGCG 1 cut(s) 803
MwoI GCNNNNNNNGC 9 cut(s) 224, 233, 553, 806, 877, 1065, 1084, 1340, 1574
NciI CCSGG 6 cut(s) 476, 573, 632, 774, 781, 1331
NcoI CCATGG 1 cut(s) 414
NlaIII CATG 6 cut(s) 70, 322, 418, 509, 1283, 1357
NlaIV GGNNCC 6 cut(s) 358, 611, 660, 778, 1015, 1038
NmeAIII GCCGAG 1 cut(s) 612
NmuCI GTSAC 5 cut(s) 142, 694, 1072, 1315, 1362
OliI CACNNNNGTG 1 cut(s) 851
PceI AGGCCT 2 cut(s) 218, 236
PcsI WCGNNNNNNNCGW 1 cut(s) 205
PfeI GAWTC 4 cut(s) 201, 811, 1183, 1348
Pfl23II CGTACG 1 cut(s) 102
PflMI CCANNNNNTGG 2 cut(s) 121, 366
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 9 cut(s) 273, 302, 802, 973, 1061, 1064, 1067, 1435, 1570
Ple19I CGATCG 1 cut(s) 199
PleI GAGTC 1 cut(s) 149
PpsI GAGTC 1 cut(s) 149
PshAI GACNNNNGTC 1 cut(s) 362
Psp124BI GAGCTC 1 cut(s) 846
Psp1406I AACGTT 1 cut(s) 638
Psp6I CCWGG 4 cut(s) 120, 394, 432, 1016
PspGI CCWGG 4 cut(s) 120, 394, 432, 1016
PspLI CGTACG 1 cut(s) 102
PspN4I GGNNCC 6 cut(s) 358, 611, 660, 778, 1015, 1038
PspPI GGNCC 3 cut(s) 357, 767, 777
PsuI RGATCY 4 cut(s) 404, 528, 658, 688
PvuI CGATCG 1 cut(s) 199
RseI CAYNNNNRTG 1 cut(s) 851
SacI GAGCTC 1 cut(s) 846
SaqAI TTAA 3 cut(s) 500, 513, 1032
SatI GCNGC 9 cut(s) 272, 301, 801, 972, 1060, 1063, 1066, 1434, 1569
Sau96I GGNCC 3 cut(s) 357, 767, 777
ScaI AGTACT 1 cut(s) 95
SchI GAGTC 1 cut(s) 150
SduI GDGCHC 3 cut(s) 50, 630, 846
SgrAI CRCCGGYG 1 cut(s) 191
SinI GGWCC 3 cut(s) 357, 767, 777
SmiMI CAYNNNNRTG 1 cut(s) 851
SmlI CTYRAG 3 cut(s) 275, 1264, 1412
SmoI CTYRAG 3 cut(s) 275, 1264, 1412
Sse9I AATT 5 cut(s) 171, 1153, 1258, 1396, 1560
SseBI AGGCCT 2 cut(s) 218, 236
SspMI CTAG 2 cut(s) 56, 1572
SstI GAGCTC 1 cut(s) 846
StuI AGGCCT 2 cut(s) 218, 236
StyI CCWWGG 1 cut(s) 414
TaaI ACNGT 5 cut(s) 98, 490, 767, 932, 1226
TaiI ACGT 3 cut(s) 641, 1289, 1341
TaqI TCGA 6 cut(s) 168, 199, 624, 684, 918, 1497
TasI AATT 5 cut(s) 171, 1153, 1258, 1396, 1560
TatI WGTACW 3 cut(s) 93, 558, 1226
TauI GCSGC 5 cut(s) 274, 303, 803, 974, 1062
TfiI GAWTC 4 cut(s) 201, 811, 1183, 1348
Tru1I TTAA 3 cut(s) 500, 513, 1032
Tru9I TTAA 3 cut(s) 500, 513, 1032
TscAI CASTG 1 cut(s) 858
TseFI GTSAC 5 cut(s) 142, 694, 1072, 1315, 1362
TseI GCWGC 4 cut(s) 1062, 1065, 1433, 1568
Tsp45I GTSAC 5 cut(s) 142, 694, 1072, 1315, 1362
TspDTI ATGAA 5 cut(s) 55, 61, 531, 971, 1087
TspGWI ACGGA 5 cut(s) 90, 356, 376, 521, 881
TspRI CASTG 1 cut(s) 858
Van91I CCANNNNNTGG 2 cut(s) 121, 366
VpaK11BI GGWCC 3 cut(s) 357, 767, 777
XapI RAATTY 2 cut(s) 171, 1396
XspI CTAG 2 cut(s) 56, 1572
ZrmI AGTACT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.