Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

79052635 .. 79054149

Gene Structure 1515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021886

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGAAGATGATGGGTGAAATGTTTGCTCAATTAGGCTCTCTGATTGCCACTGTAATGTTTGTTTATACAATATGTAAACAATACTTGCCCTACAATCTCCAGGGCCTTGTTGTAAGAAATAGCCACAAATTGTTCGGATTTGTGTACCCTTACATCCAAATCACCTTTGATGAATATGCTGATGATTTTCGCAAACGCAGCGAGGTCTACTCTGCTATCCAGAGCTACCTCAGCACCAAGTCATCAACAACGGCGAAACGACTGAAAGCTCATGATGTCAAGGGGAGCAGCACCCTGGTTCTCGGCATGGCGGATAATGAAGAAGTTACTGAGGAGTTTCGAGGGATCAAGATCTGGTGGGCTTCTATGAAAGACTCGTCCAAAAAGAACTCCTTTTCTTTCTTTCCTGAGTACGATGAGAAGAGACATTTCAAGCTAACTTTCCACAGACAACATAGGGATGTAATCCTGGGGTGTTATCTTGATCATGTTAGGAAAGAAGGGAAGGAGATTGCGATGAGGAATAGACAAAGAAAGCTTTACATCAACAACAGCGGCAAAGGGAAGTGGAGTCATGTGGTGTTTGAGCACCCTGCAACATTTGAGACTTTGGCAATGGACCCAAACAAGAAAGAGGAAATTGTGAATGATCTGGTGAAGTTTAGCGCTGGGAAAGAGTACTATGCTAAAATCGGGAAGGCTTGGAAGCGAGGCTATCTTCTATATGGGCCACCAGGAACTGGGAAGTCAACCATGATTGCTGCAATGTCTAACCTCATGAACTATGATGTTTATGATCTTGAGTTGACGGCTGTCAAGGATAACACTGAATTGAGGAAGCTGTTGATTGACATAACAGGGAAGTCGATCATCGTGATTGAAGACATTGATTGCTCGCTTGATCTTACTGGTCAAAGAAAGAAGAAAAGAGAGAAGGAGGAGGAAGATAAGGAAGAAAAGGACCCGTTTCGGAAAATGAGTGGAGAAGAAGAAACCACAACCAGCAAGGTTACTTTGTCAGGGCTGTTGAACTTTATTGATGGGATTTGGTCAGCTTGTGGAGGTGAAAGATTGATCGTGTTTACTACTAACTATGCGGACAAGCTTGATCCTGCTCTTATAAGAAGAGGAAGGATGGACAAGCATGTTGAGTTGTCTTACTGTTGCTATGAATCATTCAAAGTGCTTGCTAGGAACTATTTGGATTTGGAGTCACATAAACTGTTTGGAAGCATTCAACGGTTGTTGGGGGAGACCAATATGACTCCTGCTGATGTCGCTGAGAACTTGATGCCGAAATCTGTTTTTGAAGACGCTGATTCTTGTTTGAAGAACTTGATTGAAGCACTCGAGGCTGCAAAGGAGGAGGCAAGGGTGAAGGCAGAGGAAGAGGCAAAATTGAAAGCAGAGAAGGAAGCAAAGGAGAATCATGAGACTGCTAATGAGCAAGTCAAATGTAATGGAACATCAGCTGAAGGAAGATTATGTGAAGAAGTTAAAGAAAATGGCGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

505

Amino Acids

57.67

Weight (kDa)

6.64

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	29 - 123	1.9e-24	Domain associated at C-terminal with AAA
AAA	PF00004	239 - 386	2.1e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	388 - 461	3.1e-33	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1121
AccB7I	CCANNNNNTGG	1 cut(s)	740
AccI	GTMKAC	1 cut(s)	207
AciI	CCGC	3 cut(s)	311, 555, 1097
AclWI	GGATC	2 cut(s)	353, 1103
AcuI	CTGAAG	1 cut(s)	1494
AfaI	GTAC	3 cut(s)	146, 413, 680
AfeI	AGCGCT	1 cut(s)	667
AfiI	CCNNNNNNNGG	1 cut(s)	740
AgsI	TTSAA	9 cut(s)	433, 881, 1030, 1180, 1238, 1310, 1330, 1343, 1402
AjnI	CCWGG	4 cut(s)	99, 294, 468, 733
AluBI	AGCT	8 cut(s)	225, 269, 436, 538, 841, 1055, 1105, 1472
AluI	AGCT	8 cut(s)	225, 269, 436, 538, 841, 1055, 1105, 1472
Alw21I	GWGCWC	1 cut(s)	591
Alw26I	GTCTC	4 cut(s)	418, 599, 1247, 1427
AlwI	GGATC	2 cut(s)	353, 1103
AlwNI	CAGNNNCTG	1 cut(s)	740
Ama87I	CYCGRG	1 cut(s)	1349
Aor51HI	AGCGCT	1 cut(s)	667
AoxI	GGCC	2 cut(s)	103, 728
ApeKI	GCWGC	4 cut(s)	198, 288, 761, 1355
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	4 cut(s)	103, 619, 728, 961
AsuHPI	GGTGA	5 cut(s)	26, 154, 667, 1076, 1387
AvaI	CYCGRG	1 cut(s)	1349
AvaII	GGWCC	2 cut(s)	619, 961
BbsI	GAAGAC	2 cut(s)	888, 1317
Bbv12I	GWGCWC	1 cut(s)	591
BbvCI	CCTCAGC	1 cut(s)	230
BbvI	GCAGC	4 cut(s)	210, 300, 748, 1342
BccI	CCATC	3 cut(s)	4, 1034, 1129
BceAI	ACGGC	2 cut(s)	267, 825
BciT130I	CCWGG	4 cut(s)	101, 296, 470, 735
BclI	TGATCA	1 cut(s)	484
BcoDI	GTCTC	4 cut(s)	418, 599, 1247, 1427
BfaI	CTAG	1 cut(s)	1191
BfoI	RGCGCY	1 cut(s)	669
BglII	AGATCT	1 cut(s)	351
BisI	GCNGC	5 cut(s)	199, 289, 556, 762, 1356
BlsI	GCNGC	5 cut(s)	200, 290, 557, 763, 1357
BmcAI	AGTACT	1 cut(s)	680
Bme1390I	CCNGG	4 cut(s)	101, 296, 470, 735
Bme18I	GGWCC	2 cut(s)	619, 961
BmeT110I	CYCGRG	1 cut(s)	1349
BmgT120I	GGNCC	4 cut(s)	103, 619, 728, 961
BmiI	GGNNCC	2 cut(s)	621, 963
BmrFI	CCNGG	4 cut(s)	101, 296, 470, 735
BmrI	ACTGGG	1 cut(s)	750
BmsI	GCATC	1 cut(s)	1281
BmuI	ACTGGG	1 cut(s)	750
BoxI	GACNNNNGTC	1 cut(s)	812
BpiI	GAAGAC	2 cut(s)	888, 1317
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
BpmI	CTGGAG	1 cut(s)	83
Bpu10I	CCTNAGC	1 cut(s)	230
BpuEI	CTTGAG	1 cut(s)	821
BsaBI	GATNNNNATC	1 cut(s)	350
BsaI	GGTCTC	1 cut(s)	1247
BsaJI	CCNNGG	3 cut(s)	100, 294, 469
Bsc4I	CCNNNNNNNGG	1 cut(s)	740
Bse1I	ACTGG	2 cut(s)	745, 913
Bse3DI	GCAATG	2 cut(s)	621, 771
Bse8I	GATNNNNATC	1 cut(s)	350
BseBI	CCWGG	4 cut(s)	101, 296, 470, 735
BseDI	CCNNGG	3 cut(s)	100, 294, 469
BseGI	GGATG	3 cut(s)	153, 466, 1140
BseJI	GATNNNNATC	1 cut(s)	350
BseLI	CCNNNNNNNGG	1 cut(s)	740
BseMI	GCAATG	2 cut(s)	621, 771
BseMII	CTCAG	4 cut(s)	244, 321, 399, 1272
BseNI	ACTGG	2 cut(s)	745, 913
BseRI	GAGGAG	3 cut(s)	347, 953, 1379
BseXI	GCAGC	4 cut(s)	210, 300, 748, 1342
BseYI	CCCAGC	1 cut(s)	668
BshFI	GGCC	2 cut(s)	105, 730
BsiHKAI	GWGCWC	1 cut(s)	591
BsiHKCI	CYCGRG	1 cut(s)	1349
BslI	CCNNNNNNNGG	1 cut(s)	740
BsmAI	GTCTC	4 cut(s)	418, 599, 1247, 1427
BsmI	GAATGC	1 cut(s)	1233
BsnI	GGCC	2 cut(s)	105, 730
Bso31I	GGTCTC	1 cut(s)	1247
BsoBI	CYCGRG	1 cut(s)	1349
Bsp1286I	GDGCHC	1 cut(s)	591
Bsp143I	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
BspACI	CCGC	3 cut(s)	311, 555, 1097
BspANI	GGCC	2 cut(s)	105, 730
BspCNI	CTCAG	4 cut(s)	243, 322, 400, 1273
BspHI	TCATGA	3 cut(s)	271, 777, 1429
BspLI	GGNNCC	2 cut(s)	621, 963
BspPI	GGATC	2 cut(s)	353, 1103
BspTNI	GGTCTC	1 cut(s)	1247
BsrDI	GCAATG	2 cut(s)	621, 771
BsrI	ACTGG	2 cut(s)	745, 913
BssECI	CCNNGG	3 cut(s)	100, 294, 469
BssMI	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
Bst2UI	CCWGG	4 cut(s)	101, 296, 470, 735
Bst4CI	ACNGT	4 cut(s)	52, 1163, 1224, 1242
Bst6I	CTCTTC	3 cut(s)	416, 1120, 1383
BstC8I	GCNNGC	2 cut(s)	896, 1188
BstDEI	CTNAG	4 cut(s)	230, 330, 408, 1281
BstF5I	GGATG	3 cut(s)	153, 466, 1140
BstH2I	RGCGCY	1 cut(s)	669
BstHHI	GCGC	1 cut(s)	668
BstKTI	GATC	9 cut(s)	348, 354, 487, 652, 799, 870, 904, 1077, 1111
BstMAI	GTCTC	4 cut(s)	418, 599, 1247, 1427
BstMBI	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
BstMWI	GCNNNNNNNGC	4 cut(s)	198, 231, 1277, 1352
BstNI	CCWGG	4 cut(s)	101, 296, 470, 735
BstNSI	RCATGY	1 cut(s)	1148
BstPAI	GACNNNNGTC	1 cut(s)	812
BstSCI	CCNGG	4 cut(s)	99, 294, 468, 733
BstV1I	GCAGC	4 cut(s)	210, 300, 748, 1342
BstV2I	GAAGAC	2 cut(s)	888, 1317
BstX2I	RGATCY	1 cut(s)	351
BstYI	RGATCY	1 cut(s)	351
BsuRI	GGCC	2 cut(s)	105, 730
BtgZI	GCGATG	1 cut(s)	530
BtsCI	GGATG	3 cut(s)	153, 466, 1140
BtsIMutI	CAGTG	2 cut(s)	48, 825
Cac8I	GCNNGC	2 cut(s)	896, 1188
CaiI	CAGNNNCTG	1 cut(s)	740
CciI	TCATGA	3 cut(s)	271, 777, 1429
CfoI	GCGC	1 cut(s)	668
Cfr13I	GGNCC	4 cut(s)	103, 619, 728, 961
CseI	GACGC	1 cut(s)	1322
Csp6I	GTAC	3 cut(s)	145, 412, 679
CviAII	CATG	8 cut(s)	272, 307, 488, 575, 754, 778, 1145, 1430
CviQI	GTAC	3 cut(s)	145, 412, 679
DdeI	CTNAG	4 cut(s)	230, 330, 408, 1281
DpnI	GATC	9 cut(s)	347, 353, 486, 651, 798, 869, 903, 1076, 1110
DpnII	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
Eam1104I	CTCTTC	3 cut(s)	416, 1120, 1383
EarI	CTCTTC	3 cut(s)	416, 1120, 1383
EciI	GGCGGA	1 cut(s)	326
Eco31I	GGTCTC	1 cut(s)	1247
Eco47I	GGWCC	2 cut(s)	619, 961
Eco47III	AGCGCT	1 cut(s)	667
Eco57I	CTGAAG	1 cut(s)	1494
Eco88I	CYCGRG	1 cut(s)	1349
EcoO109I	RGGNCCY	2 cut(s)	103, 961
EcoRII	CCWGG	4 cut(s)	99, 294, 468, 733
FaeI	CATG	8 cut(s)	275, 310, 491, 578, 757, 781, 1148, 1433
FalI	AAGNNNNNCTT	2 cut(s)	377, 409
FatI	CATG	8 cut(s)	271, 306, 487, 574, 753, 777, 1144, 1429
FbaI	TGATCA	1 cut(s)	484
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	5 cut(s)	199, 289, 556, 762, 1356
FokI	GGATG	3 cut(s)	140, 473, 1147
Fsp4HI	GCNGC	5 cut(s)	199, 289, 556, 762, 1356
FspBI	CTAG	1 cut(s)	1191
GlaI	GCGC	1 cut(s)	667
GluI	GCNGC	5 cut(s)	199, 289, 556, 762, 1356
GsaI	CCCAGC	1 cut(s)	672
GsuI	CTGGAG	1 cut(s)	83
HaeII	RGCGCY	1 cut(s)	669
HaeIII	GGCC	2 cut(s)	105, 730
HgaI	GACGC	1 cut(s)	1322
HhaI	GCGC	1 cut(s)	668
Hin1II	CATG	8 cut(s)	275, 310, 491, 578, 757, 781, 1148, 1433
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HincII	GTYRAC	2 cut(s)	750, 807
HindII	GTYRAC	2 cut(s)	750, 807
HindIII	AAGCTT	2 cut(s)	536, 1103
HinfI	GANTC	7 cut(s)	374, 571, 1172, 1211, 1264, 1319, 1426
HphI	GGTGA	5 cut(s)	26, 154, 667, 1076, 1387
Hpy166II	GTNNAC	6 cut(s)	77, 145, 208, 750, 807, 1083
Hpy188I	TCNGA	3 cut(s)	42, 137, 972
Hpy8I	GTNNAC	6 cut(s)	77, 145, 208, 750, 807, 1083
HpyAV	CCTTC	8 cut(s)	494, 499, 691, 928, 1125, 1372, 1405, 1469
HpyCH4III	ACNGT	4 cut(s)	52, 1163, 1224, 1242
HpyCH4V	TGCA	3 cut(s)	596, 764, 1358
HpyF10VI	GCNNNNNNNGC	4 cut(s)	198, 231, 1277, 1352
HpyF3I	CTNAG	4 cut(s)	230, 330, 408, 1281
Hsp92II	CATG	8 cut(s)	275, 310, 491, 578, 757, 781, 1148, 1433
HspAI	GCGC	1 cut(s)	666
Ksp22I	TGATCA	1 cut(s)	484
Kzo9I	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
LmnI	GCTCC	1 cut(s)	285
Lsp1109I	GCAGC	4 cut(s)	210, 300, 748, 1342
LweI	GCATC	1 cut(s)	1281
MaeI	CTAG	1 cut(s)	1191
MaeIII	GTNAC	3 cut(s)	325, 1009, 1212
MalI	GATC	9 cut(s)	347, 353, 486, 651, 798, 869, 903, 1076, 1110
MboI	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
MflI	RGATCY	1 cut(s)	351
MhlI	GDGCHC	1 cut(s)	591
MluCI	AATT	5 cut(s)	29, 128, 639, 830, 1397
MlyI	GAGTC	4 cut(s)	368, 580, 1220, 1258
MseI	TTAA	1 cut(s)	1497
MslI	CAYNNNNRTG	2 cut(s)	53, 459
MspA1I	CMGCKG	2 cut(s)	555, 1472
MspR9I	CCNGG	4 cut(s)	101, 296, 470, 735
Mva1269I	GAATGC	1 cut(s)	1233
MvaI	CCWGG	4 cut(s)	101, 296, 470, 735
MwoI	GCNNNNNNNGC	4 cut(s)	198, 231, 1277, 1352
NdeII	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
NlaIII	CATG	8 cut(s)	275, 310, 491, 578, 757, 781, 1148, 1433
NlaIV	GGNNCC	2 cut(s)	621, 963
NmeAIII	GCCGAG	1 cut(s)	282
NmuCI	GTSAC	1 cut(s)	1212
NspI	RCATGY	1 cut(s)	1148
PaeR7I	CTCGAG	1 cut(s)	1349
PagI	TCATGA	3 cut(s)	271, 777, 1429
PctI	GAATGC	1 cut(s)	1233
PfeI	GAWTC	3 cut(s)	1172, 1319, 1426
PflMI	CCANNNNNTGG	1 cut(s)	740
PkrI	GCNGC	5 cut(s)	200, 290, 557, 763, 1357
PleI	GAGTC	4 cut(s)	368, 579, 1219, 1258
PpsI	GAGTC	4 cut(s)	368, 579, 1219, 1258
PpuMI	RGGWCCY	1 cut(s)	961
PshAI	GACNNNNGTC	1 cut(s)	812
PsiI	TTATAA	1 cut(s)	1121
Psp5II	RGGWCCY	1 cut(s)	961
Psp6I	CCWGG	4 cut(s)	99, 294, 468, 733
PspFI	CCCAGC	1 cut(s)	668
PspGI	CCWGG	4 cut(s)	99, 294, 468, 733
PspN4I	GGNNCC	2 cut(s)	621, 963
PspPI	GGNCC	4 cut(s)	103, 619, 728, 961
PspPPI	RGGWCCY	1 cut(s)	961
PspXI	VCTCGAGB	1 cut(s)	1349
PstNI	CAGNNNCTG	1 cut(s)	740
PsuI	RGATCY	1 cut(s)	351
PvuII	CAGCTG	1 cut(s)	1472
RsaI	GTAC	3 cut(s)	146, 413, 680
RsaNI	GTAC	3 cut(s)	145, 412, 679
RseI	CAYNNNNRTG	2 cut(s)	53, 459
SaqAI	TTAA	1 cut(s)	1497
SatI	GCNGC	5 cut(s)	199, 289, 556, 762, 1356
Sau3AI	GATC	9 cut(s)	345, 351, 484, 649, 796, 867, 901, 1074, 1108
Sau96I	GGNCC	4 cut(s)	103, 619, 728, 961
ScaI	AGTACT	1 cut(s)	680
SchI	GAGTC	4 cut(s)	368, 580, 1220, 1258
ScrFI	CCNGG	4 cut(s)	101, 296, 470, 735
SduI	GDGCHC	1 cut(s)	591
SfaNI	GCATC	1 cut(s)	1281
Sfr274I	CTCGAG	1 cut(s)	1349
SinI	GGWCC	2 cut(s)	619, 961
SlaI	CTCGAG	1 cut(s)	1349
SmiMI	CAYNNNNRTG	2 cut(s)	53, 459
SmlI	CTYRAG	2 cut(s)	800, 1349
SmoI	CTYRAG	2 cut(s)	800, 1349
Sse9I	AATT	5 cut(s)	29, 128, 639, 830, 1397
SsiI	CCGC	3 cut(s)	311, 555, 1097
SspMI	CTAG	1 cut(s)	1191
StyD4I	CCNGG	4 cut(s)	99, 294, 468, 733
TaaI	ACNGT	4 cut(s)	52, 1163, 1224, 1242
TaqI	TCGA	3 cut(s)	340, 866, 1350
TasI	AATT	5 cut(s)	29, 128, 639, 830, 1397
TatI	WGTACW	1 cut(s)	678
TauI	GCSGC	1 cut(s)	558
TfiI	GAWTC	3 cut(s)	1172, 1319, 1426
Tru1I	TTAA	1 cut(s)	1497
Tru9I	TTAA	1 cut(s)	1497
TscAI	CASTG	2 cut(s)	55, 832
TseFI	GTSAC	1 cut(s)	1212
TseI	GCWGC	4 cut(s)	198, 288, 761, 1355
Tsp45I	GTSAC	1 cut(s)	1212
TspDTI	ATGAA	6 cut(s)	17, 186, 333, 383, 794, 1185
TspRI	CASTG	2 cut(s)	55, 832
Van91I	CCANNNNNTGG	1 cut(s)	740
VpaK11BI	GGWCC	2 cut(s)	619, 961
XceI	RCATGY	1 cut(s)	1148
XhoI	CTCGAG	1 cut(s)	1349
XmiI	GTMKAC	1 cut(s)	207
XspI	CTAG	1 cut(s)	1191
ZrmI	AGTACT	1 cut(s)	680

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.