Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

2187461 .. 2190423

Gene Structure 2963 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG031800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGATACCAACAACGATGAACCAGATGTGGACAACAATGGGTTCAACCCTAGCCAGCTTCATGTTTGTTTGGGCCATAATCCGCCAGTACTGCCCTTACGAGCTCCGTAGATTCTTCGAAAAATACTCCCACAGAATCATGGGCTACTTCTACCCCTACATCAAAATCTCCATCCACGAGTTCACGGGCGACCGCCTCAAGCGGAGCGAGGCCTACGCCGCCGTGGAGGCCTATCTCAGCTCCAACACTTCAAAAAGCGCCAAAAGACTCAAGGCAGAGATGGTCAAAGACAGCAGCAACTTGGTTCTGAGCATGGACGAGTATGAAAGAGTCACAGATGAGTTTCATGGTGCAACTGTGTGGTGGGTTCTGACCAAAGCTCTGTCACCGGGCCGGTCCATGTCAATGTCTTACTATCCGGAGCAGGAGAAAAGGTTTTACAAGCTCACTTTTCACAAGAAGTACAGGGAGATCATCACAGGGTCTTACTTAGACCATGTGGTGAAAGAAGGCAAGGAAATTAGGGTTAGGAATAGGCAGAGGAAGCTTTACACAAATAGCCCCGGTTACAAGTGGCCTAGCTACAAGCAGACTATGTGGAGTCACATTGTGTTTGAGCATCCAGCGACGTTCGAAACAATGGCGTTGGAGCCAGAAAAGAAGAAGGAGATCATTGAAGACTTGGTGACTTTTAGTAAGAGTAAAGATTTCTATGCAAGAATTGGGAAAGCTTGGAAAAGGGGGTACTTGCTTTATGGGCCACCAGGGACTGGGAAGTCCACCATGATTGCAGCAATGGCTAACTTGCTGAGCTATGATGTCTATGATCTTGAGCTCACTGCTGTGAAGGACAACACAGAACTGAGGAAGCTTTTGATCGAGACGACAAGTAAGTCTATAATTGTCATTGAGGATATTGATTGCTCACTTGATCTAACAGGTCAGAGGAAGAAGAAAGCAGAGAAGGGTTGTGCGGAAGATGAGATTATTAAGGCAAGTAAGGAGAGGATGAAGGAGCCAAAAGAGGAGGGTGGTAGTGGAAGTAGTAAGGTCACTCTTTCTGGGCTTTTGAATTTCATTGATGGGCTTTGGTCTGCTTGCGGGGGTGAGAGGCTGGTGGTTTTTACTACTAATTATGTTGAGAAATTGGATCCTGCATTGATTAGGAGGGGTAGAATGGACAAGCATATTGAGCTTTCTTATTGTAGTTTTGAAGGATTCAAAGTTTTGGCAAAGAATTACTTAAAGCTTGAGAGTCATGAAATGTTTGATATGATTCAGAAGCTAATGGGAGAGACCAAAATGACCCCTGCTGATGTAGCTGAGAATCTCATGCCCAAGTCTCCACAAGATGATCCAGAGAGGTGTCTTTCGAATTTCATTCAAGCTCTTGAAGAAGTTAAGGAGGAAGAAGAAGCCAAGAAGAAAGCTGAAGAAGTGAAAGAGATTGCTGCTACAACAAAGGAGCTGCCACAAGAAAACAAAGATGTTGAGGTAACAGAATGTTCTGGGGAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

506

Amino Acids

58.41

Weight (kDa)

7.55

Isoelectric Point (pI)

45.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	31 - 125	1.4e-26	Domain associated at C-terminal with AAA
AAA	PF00004	249 - 400	5.3e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	402 - 475	1.8e-34	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	775, 892
AccB7I	CCANNNNNTGG	1 cut(s)	770
AccIII	TCCGGA	1 cut(s)	418
AciI	CCGC	6 cut(s)	82, 193, 202, 219, 974, 1101
AclWI	GGATC	3 cut(s)	1145, 1158, 1349
AcsI	RAATTY	2 cut(s)	1072, 1375
AcuI	CTGAAG	1 cut(s)	1452
AdeI	CACNNNGTG	1 cut(s)	610
AfaI	GTAC	3 cut(s)	89, 464, 746
AfiI	CCNNNNNNNGG	1 cut(s)	770
AgsI	TTSAA	8 cut(s)	45, 252, 677, 1072, 1214, 1222, 1385, 1394
AjnI	CCWGG	1 cut(s)	763
AleI	CACNNNNGTG	1 cut(s)	842
Alw21I	GWGCWC	2 cut(s)	105, 837
Alw26I	GTCTC	3 cut(s)	875, 1289, 1347
AlwI	GGATC	3 cut(s)	1145, 1158, 1349
AlwNI	CAGNNNCTG	1 cut(s)	770
Aor13HI	TCCGGA	1 cut(s)	418
AoxI	GGCC	6 cut(s)	72, 210, 228, 391, 575, 758
ApeKI	GCWGC	4 cut(s)	294, 791, 1451, 1468
ApoI	RAATTY	2 cut(s)	1072, 1375
AspLEI	GCGC	1 cut(s)	260
AspS9I	GGNCC	4 cut(s)	72, 391, 396, 758
AsuC2I	CCSGG	2 cut(s)	390, 564
AsuHPI	GGTGA	4 cut(s)	378, 514, 697, 1118
AsuII	TTCGAA	3 cut(s)	117, 633, 1373
AvaII	GGWCC	1 cut(s)	396
BamHI	GGATCC	1 cut(s)	1150
BanII	GRGCYC	2 cut(s)	105, 837
BauI	CACGAG	1 cut(s)	176
BbsI	GAAGAC	1 cut(s)	684
Bbv12I	GWGCWC	2 cut(s)	105, 837
BbvI	GCAGC	4 cut(s)	306, 803, 1438, 1455
BccI	CCATC	3 cut(s)	179, 274, 1076
BceAI	ACGGC	1 cut(s)	206
BciT130I	CCWGG	1 cut(s)	765
BcnI	CCSGG	2 cut(s)	390, 564
BcoDI	GTCTC	3 cut(s)	875, 1289, 1347
BfaI	CTAG	2 cut(s)	50, 579
BfoI	RGCGCY	1 cut(s)	261
BglI	GCCNNNNNGGC	1 cut(s)	227
BisI	GCNGC	5 cut(s)	219, 295, 792, 1452, 1469
BlpI	GCTNAGC	1 cut(s)	809
BlsI	GCNGC	5 cut(s)	220, 296, 793, 1453, 1470
BmcAI	AGTACT	1 cut(s)	89
Bme1390I	CCNGG	3 cut(s)	390, 564, 765
Bme18I	GGWCC	1 cut(s)	396
BmgT120I	GGNCC	4 cut(s)	72, 391, 396, 758
BmiI	GGNNCC	3 cut(s)	651, 1017, 1152
BmrFI	CCNGG	3 cut(s)	390, 564, 765
BmrI	ACTGGG	1 cut(s)	780
BmsI	GCATC	1 cut(s)	628
BmuI	ACTGGG	1 cut(s)	780
BpiI	GAAGAC	1 cut(s)	684
Bpu1102I	GCTNAGC	1 cut(s)	809
Bpu14I	TTCGAA	3 cut(s)	117, 633, 1373
BpuEI	CTTGAG	4 cut(s)	182, 254, 851, 1271
BpuMI	CCSGG	2 cut(s)	390, 564
BsaI	GGTCTC	1 cut(s)	1289
BsaJI	CCNNGG	3 cut(s)	222, 562, 764
BsaWI	WCCGGW	1 cut(s)	418
BsaXI	ACNNNNNCTCC	2 cut(s)	419, 449
Bsc4I	CCNNNNNNNGG	1 cut(s)	770
Bse118I	RCCGGY	1 cut(s)	393
Bse1I	ACTGG	2 cut(s)	85, 775
Bse3DI	GCAATG	1 cut(s)	801
BseAI	TCCGGA	1 cut(s)	418
BseBI	CCWGG	1 cut(s)	765
BseDI	CCNNGG	3 cut(s)	222, 562, 764
BseGI	GGATG	3 cut(s)	171, 619, 1014
BseLI	CCNNNNNNNGG	1 cut(s)	770
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	5 cut(s)	250, 299, 800, 854, 1314
BseNI	ACTGG	2 cut(s)	85, 775
BseRI	GAGGAG	1 cut(s)	1040
BseXI	GCAGC	4 cut(s)	306, 803, 1438, 1455
Bsh1285I	CGRYCG	1 cut(s)	193
BshFI	GGCC	6 cut(s)	74, 212, 230, 393, 577, 760
BsiEI	CGRYCG	1 cut(s)	193
BsiHKAI	GWGCWC	2 cut(s)	105, 837
BsiSI	CCGG	4 cut(s)	389, 394, 419, 564
BslFI	GGGAC	1 cut(s)	781
BslI	CCNNNNNNNGG	1 cut(s)	770
BsmAI	GTCTC	3 cut(s)	875, 1289, 1347
BsmBI	CGTCTC	1 cut(s)	875
BsmFI	GGGAC	1 cut(s)	781
BsnI	GGCC	6 cut(s)	74, 212, 230, 393, 577, 760
Bso31I	GGTCTC	1 cut(s)	1289
Bsp119I	TTCGAA	3 cut(s)	117, 633, 1373
Bsp1286I	GDGCHC	2 cut(s)	105, 837
Bsp13I	TCCGGA	1 cut(s)	418
Bsp143I	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
Bsp1720I	GCTNAGC	1 cut(s)	809
BspACI	CCGC	6 cut(s)	82, 193, 202, 219, 974, 1101
BspANI	GGCC	6 cut(s)	74, 212, 230, 393, 577, 760
BspCNI	CTCAG	5 cut(s)	249, 300, 801, 855, 1315
BspEI	TCCGGA	1 cut(s)	418
BspHI	TCATGA	1 cut(s)	1258
BspLI	GGNNCC	3 cut(s)	651, 1017, 1152
BspPI	GGATC	3 cut(s)	1145, 1158, 1349
BspT104I	TTCGAA	3 cut(s)	117, 633, 1373
BspTNI	GGTCTC	1 cut(s)	1289
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	1 cut(s)	393
BsrI	ACTGG	2 cut(s)	85, 775
BssAI	RCCGGY	1 cut(s)	393
BssECI	CCNNGG	3 cut(s)	222, 562, 764
BssMI	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
BssSI	CACGAG	1 cut(s)	176
Bst2BI	CACGAG	1 cut(s)	176
Bst2UI	CCWGG	1 cut(s)	765
Bst4CI	ACNGT	1 cut(s)	358
BstBI	TTCGAA	3 cut(s)	117, 633, 1373
BstC8I	GCNNGC	2 cut(s)	55, 1099
BstDEI	CTNAG	6 cut(s)	236, 308, 490, 809, 863, 1323
BstDSI	CCRYGG	1 cut(s)	222
BstF5I	GGATG	3 cut(s)	171, 619, 1014
BstH2I	RGCGCY	1 cut(s)	261
BstHHI	GCGC	1 cut(s)	260
BstKTI	GATC	7 cut(s)	474, 672, 829, 879, 934, 1153, 1357
BstMAI	GTCTC	3 cut(s)	875, 1289, 1347
BstMBI	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
BstMCI	CGRYCG	1 cut(s)	193
BstMWI	GCNNNNNNNGC	8 cut(s)	90, 218, 227, 544, 757, 797, 1192, 1319
BstNI	CCWGG	1 cut(s)	765
BstSCI	CCNGG	3 cut(s)	388, 562, 763
BstV1I	GCAGC	4 cut(s)	306, 803, 1438, 1455
BstV2I	GAAGAC	1 cut(s)	684
BstX2I	RGATCY	1 cut(s)	1150
BstYI	RGATCY	1 cut(s)	1150
BsuRI	GGCC	6 cut(s)	74, 212, 230, 393, 577, 760
BtgI	CCRYGG	1 cut(s)	222
BtsCI	GGATG	3 cut(s)	171, 619, 1014
BtsI	GCAGTG	1 cut(s)	837
BtsIMutI	CAGTG	1 cut(s)	837
Cac8I	GCNNGC	2 cut(s)	55, 1099
CaiI	CAGNNNCTG	1 cut(s)	770
CciI	TCATGA	1 cut(s)	1258
CfoI	GCGC	1 cut(s)	260
Cfr10I	RCCGGY	1 cut(s)	393
Cfr13I	GGNCC	4 cut(s)	72, 391, 396, 758
Csp6I	GTAC	3 cut(s)	88, 463, 745
CspCI	CAANNNNNGTGG	2 cut(s)	769, 804
CviAII	CATG	9 cut(s)	61, 139, 313, 347, 400, 497, 784, 1259, 1333
CviQI	GTAC	3 cut(s)	88, 463, 745
DdeI	CTNAG	6 cut(s)	236, 308, 490, 809, 863, 1323
DpnI	GATC	7 cut(s)	473, 671, 828, 878, 933, 1152, 1356
DpnII	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
DraIII	CACNNNGTG	1 cut(s)	610
DrdI	GACNNNNNNGTC	2 cut(s)	775, 892
DseDI	GACNNNNNNGTC	2 cut(s)	775, 892
EciI	GGCGGA	1 cut(s)	71
Ecl136II	GAGCTC	2 cut(s)	103, 835
Eco147I	AGGCCT	2 cut(s)	212, 230
Eco24I	GRGCYC	2 cut(s)	105, 837
Eco31I	GGTCTC	1 cut(s)	1289
Eco47I	GGWCC	1 cut(s)	396
Eco53kI	GAGCTC	2 cut(s)	103, 835
Eco57I	CTGAAG	1 cut(s)	1452
EcoICRI	GAGCTC	2 cut(s)	103, 835
EcoRII	CCWGG	1 cut(s)	763
EcoT38I	GRGCYC	2 cut(s)	105, 837
Esp3I	CGTCTC	1 cut(s)	875
FaeI	CATG	9 cut(s)	64, 142, 316, 350, 403, 500, 787, 1262, 1336
FalI	AAGNNNNNCTT	2 cut(s)	1226, 1258
FaqI	GGGAC	1 cut(s)	781
FatI	CATG	9 cut(s)	60, 138, 312, 346, 399, 496, 783, 1258, 1332
FauI	CCCGC	1 cut(s)	1094
Fnu4HI	GCNGC	5 cut(s)	219, 295, 792, 1452, 1469
FokI	GGATG	3 cut(s)	158, 606, 1021
FriOI	GRGCYC	2 cut(s)	105, 837
Fsp4HI	GCNGC	5 cut(s)	219, 295, 792, 1452, 1469
FspBI	CTAG	2 cut(s)	50, 579
GlaI	GCGC	1 cut(s)	259
GluI	GCNGC	5 cut(s)	219, 295, 792, 1452, 1469
HaeII	RGCGCY	1 cut(s)	261
HaeIII	GGCC	6 cut(s)	74, 212, 230, 393, 577, 760
HapII	CCGG	4 cut(s)	389, 394, 419, 564
HhaI	GCGC	1 cut(s)	260
Hin1II	CATG	9 cut(s)	64, 142, 316, 350, 403, 500, 787, 1262, 1336
Hin6I	GCGC	1 cut(s)	258
HinP1I	GCGC	1 cut(s)	258
HindIII	AAGCTT	4 cut(s)	545, 729, 869, 1247
HinfI	GANTC	9 cut(s)	111, 135, 267, 330, 601, 1218, 1255, 1276, 1327
HpaII	CCGG	4 cut(s)	389, 394, 419, 564
HphI	GGTGA	4 cut(s)	378, 514, 697, 1118
Hpy166II	GTNNAC	3 cut(s)	30, 183, 780
Hpy188I	TCNGA	4 cut(s)	309, 372, 945, 1281
Hpy188III	TCNNGA	6 cut(s)	419, 830, 880, 1259, 1358, 1391
Hpy8I	GTNNAC	3 cut(s)	30, 183, 780
Hpy99I	CGWCG	1 cut(s)	631
HpyAV	CCTTC	6 cut(s)	503, 658, 841, 958, 1006, 1208
HpyCH4III	ACNGT	1 cut(s)	358
HpyCH4IV	ACGT	1 cut(s)	629
HpyCH4V	TGCA	4 cut(s)	353, 716, 791, 1157
HpyF10VI	GCNNNNNNNGC	8 cut(s)	90, 218, 227, 544, 757, 797, 1192, 1319
HpyF3I	CTNAG	6 cut(s)	236, 308, 490, 809, 863, 1323
HpySE526I	ACGT	1 cut(s)	629
Hsp92II	CATG	9 cut(s)	64, 142, 316, 350, 403, 500, 787, 1262, 1336
HspAI	GCGC	1 cut(s)	258
Kpn2I	TCCGGA	1 cut(s)	418
Kzo9I	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
LmnI	GCTCC	8 cut(s)	108, 204, 245, 421, 649, 1015, 1465, 1513
Lsp1109I	GCAGC	4 cut(s)	306, 803, 1438, 1455
LweI	GCATC	1 cut(s)	628
MaeI	CTAG	2 cut(s)	50, 579
MaeII	ACGT	1 cut(s)	629
MaeIII	GTNAC	7 cut(s)	331, 384, 566, 602, 685, 1051, 1495
MalI	GATC	7 cut(s)	473, 671, 828, 878, 933, 1152, 1356
MboI	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
MflI	RGATCY	1 cut(s)	1150
MhlI	GDGCHC	2 cut(s)	105, 837
MluCI	AATT	8 cut(s)	519, 720, 900, 1072, 1132, 1145, 1237, 1375
MlyI	GAGTC	4 cut(s)	261, 339, 610, 1264
MmeI	TCCRAC	2 cut(s)	267, 627
MroI	TCCGGA	1 cut(s)	418
MseI	TTAA	3 cut(s)	990, 1244, 1401
MslI	CAYNNNNRTG	2 cut(s)	404, 842
MspI	CCGG	4 cut(s)	389, 394, 419, 564
MspR9I	CCNGG	3 cut(s)	390, 564, 765
MvaI	CCWGG	1 cut(s)	765
MwoI	GCNNNNNNNGC	8 cut(s)	90, 218, 227, 544, 757, 797, 1192, 1319
NciI	CCSGG	2 cut(s)	390, 564
NdeII	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
NlaIII	CATG	9 cut(s)	64, 142, 316, 350, 403, 500, 787, 1262, 1336
NlaIV	GGNNCC	3 cut(s)	651, 1017, 1152
NmuCI	GTSAC	5 cut(s)	331, 384, 602, 685, 1051
NspV	TTCGAA	3 cut(s)	117, 633, 1373
OliI	CACNNNNGTG	1 cut(s)	842
PagI	TCATGA	1 cut(s)	1258
PceI	AGGCCT	2 cut(s)	212, 230
PfeI	GAWTC	5 cut(s)	111, 135, 1218, 1276, 1327
PflMI	CCANNNNNTGG	1 cut(s)	770
PkrI	GCNGC	5 cut(s)	220, 296, 793, 1453, 1470
PleI	GAGTC	4 cut(s)	261, 338, 609, 1263
PpsI	GAGTC	4 cut(s)	261, 338, 609, 1263
Psp124BI	GAGCTC	2 cut(s)	105, 837
Psp6I	CCWGG	1 cut(s)	763
PspGI	CCWGG	1 cut(s)	763
PspN4I	GGNNCC	3 cut(s)	651, 1017, 1152
PspPI	GGNCC	4 cut(s)	72, 391, 396, 758
PstNI	CAGNNNCTG	1 cut(s)	770
PsuI	RGATCY	1 cut(s)	1150
RsaI	GTAC	3 cut(s)	89, 464, 746
RsaNI	GTAC	3 cut(s)	88, 463, 745
RseI	CAYNNNNRTG	2 cut(s)	404, 842
SacI	GAGCTC	2 cut(s)	105, 837
SaqAI	TTAA	3 cut(s)	990, 1244, 1401
SatI	GCNGC	5 cut(s)	219, 295, 792, 1452, 1469
Sau3AI	GATC	7 cut(s)	471, 669, 826, 876, 931, 1150, 1354
Sau96I	GGNCC	4 cut(s)	72, 391, 396, 758
ScaI	AGTACT	1 cut(s)	89
SchI	GAGTC	4 cut(s)	261, 339, 610, 1264
ScrFI	CCNGG	3 cut(s)	390, 564, 765
SduI	GDGCHC	2 cut(s)	105, 837
SfaNI	GCATC	1 cut(s)	628
SfuI	TTCGAA	3 cut(s)	117, 633, 1373
SinI	GGWCC	1 cut(s)	396
SmiMI	CAYNNNNRTG	2 cut(s)	404, 842
SmlI	CTYRAG	4 cut(s)	197, 269, 830, 1250
SmoI	CTYRAG	4 cut(s)	197, 269, 830, 1250
Sse9I	AATT	8 cut(s)	519, 720, 900, 1072, 1132, 1145, 1237, 1375
SseBI	AGGCCT	2 cut(s)	212, 230
SsiI	CCGC	6 cut(s)	82, 193, 202, 219, 974, 1101
SspMI	CTAG	2 cut(s)	50, 579
SstI	GAGCTC	2 cut(s)	105, 837
StuI	AGGCCT	2 cut(s)	212, 230
StyD4I	CCNGG	3 cut(s)	388, 562, 763
TaaI	ACNGT	1 cut(s)	358
TaiI	ACGT	1 cut(s)	632
TaqI	TCGA	4 cut(s)	117, 633, 879, 1373
TasI	AATT	8 cut(s)	519, 720, 900, 1072, 1132, 1145, 1237, 1375
TatI	WGTACW	2 cut(s)	87, 462
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	5 cut(s)	111, 135, 1218, 1276, 1327
Tru1I	TTAA	3 cut(s)	990, 1244, 1401
Tru9I	TTAA	3 cut(s)	990, 1244, 1401
TscAI	CASTG	1 cut(s)	844
TseFI	GTSAC	5 cut(s)	331, 384, 602, 685, 1051
TseI	GCWGC	4 cut(s)	294, 791, 1451, 1468
Tsp45I	GTSAC	5 cut(s)	331, 384, 602, 685, 1051
TspDTI	ATGAA	8 cut(s)	32, 49, 335, 339, 1025, 1066, 1275, 1369
TspGWI	ACGGA	1 cut(s)	95
TspRI	CASTG	1 cut(s)	844
Van91I	CCANNNNNTGG	1 cut(s)	770
VpaK11BI	GGWCC	1 cut(s)	396
XapI	RAATTY	2 cut(s)	1072, 1375
XspI	CTAG	2 cut(s)	50, 579
ZrmI	AGTACT	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.