Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

67082230 .. 67084268

Gene Structure 2039 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0540600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGCCATCATTTCCGTTCACTTTCACGCTCCTCATTTTGTTGCTTCTGTCAACCCTCCACATCTCCCTCGCCGGTTTACTCGCCGAGCCGGTAACCGGTCACGGCCAGCCTCTCAAGCCAGGCGAGTACTCCAGCCCAAACACGGTCCCGGCCTACCCTGTCCAAACCCAGGCCCAGACCTGCCGCCTCGACCTCTCCGCCGAGCTCTTCGGCGGCGTCAACGAGGCCTGCGGCCGAAACCTCGACCGGAGCCGATGCTGCCCCGTCCTCGCCGCCTGGCTCTTCGCCGCTCACGCCAGGTCAGCTCTGGAAATCTCCTCCGCTCCGGCTCCTTCCGCCGGCGGCGACCTTCCGATGATGCCGGACGACGCGCAGAAGTGCGTGAACTCTCTCCAGACCTCGCTCCTCAGCCGAAACATCCGGATCCCACAGCCGAACGCCACGTGTGACGCCATTCTCTGCTTCTGTGGGATCAGGCTCCACCAGATCAGCTCCCTGAGCTGTCCGGCGGCGTTCAACGTCTCCGGGTTCCACAACGCCACCCCTACCGCCGCGGTCAAGAATCTCGAAAAGAACTGCCGTAACTCTTCCTACACTGGCTGCACCAAATGCCTCGGCGCCCTCCAGAAGCTGAAGGGCGGGACGACGAGCAAGAACGGAACAACGAGGGACAAGAGCACGAGCGAGAGGGCGGGCAAGATGTTCGACCGGGACTGCCAGCTCATGGGGCTGACGTGGCTGCTGGCGAAGAACAAGACGGCCCACATTCCGACCGTCTCCGCCGTGTTGCGCGCCATAATGTACAGCGCTCACCCGCCGCACGAGAACACGTGCAGCCCGGACCAGGAGAACATGCCGCTGGCCGTTGATTCCTTGCAGTTTGACAAGTCGTCATCGCCGGCGTCGGTGTTTTTGTTTCCGGTTGTGCCCCTAATCATGGTTTTGGTTTCTCTGTTTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

320

Amino Acids

34.23

Weight (kDa)

8.52

Isoelectric Point (pI)

54.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SPARK	PF19160	57 - 222	5.8e-13	SPARK

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	188
AccB1I	GGYRCC	1 cut(s)	617
AccB7I	CCANNNNNTGG	1 cut(s)	724
AccBSI	CCGCTC	2 cut(s)	290, 323
AccII	CGCG	3 cut(s)	371, 554, 792
AccIII	TCCGGA	1 cut(s)	420
AclWI	GGATC	3 cut(s)	418, 431, 479
AcoI	YGGCCR	3 cut(s)	103, 232, 861
AcuI	CTGAAG	1 cut(s)	653
AcvI	CACGTG	2 cut(s)	444, 831
AcyI	GRCGYC	4 cut(s)	216, 450, 618, 902
AfaI	GTAC	2 cut(s)	128, 803
AfeI	AGCGCT	1 cut(s)	808
AfiI	CCNNNNNNNGG	7 cut(s)	95, 142, 169, 338, 724, 844, 937
AflIII	ACRYGT	2 cut(s)	443, 828
AgeI	ACCGGT	1 cut(s)	95
AgsI	TTSAA	1 cut(s)	517
AhdI	GACNNNNNGTC	1 cut(s)	889
AjiI	CACGTC	1 cut(s)	735
AjnI	CCWGG	5 cut(s)	118, 168, 275, 296, 843
AluBI	AGCT	6 cut(s)	205, 305, 492, 501, 631, 721
AluI	AGCT	6 cut(s)	205, 305, 492, 501, 631, 721
Alw21I	GWGCWC	2 cut(s)	207, 680
Alw26I	GTCTC	2 cut(s)	526, 781
AlwI	GGATC	3 cut(s)	418, 431, 479
AlwNI	CAGNNNCTG	1 cut(s)	631
Aor13HI	TCCGGA	1 cut(s)	420
Aor51HI	AGCGCT	1 cut(s)	808
AoxI	GGCC	7 cut(s)	103, 150, 171, 225, 232, 759, 861
ApeKI	GCWGC	4 cut(s)	258, 600, 739, 834
AsiGI	ACCGGT	1 cut(s)	95
AspLEI	GCGC	5 cut(s)	373, 620, 792, 794, 809
AspS9I	GGNCC	4 cut(s)	145, 172, 760, 841
AsuC2I	CCSGG	4 cut(s)	149, 526, 710, 839
AsuHPI	GGTGA	1 cut(s)	803
AvaII	GGWCC	2 cut(s)	145, 841
BaeGI	GKGCMC	1 cut(s)	930
BamHI	GGATCC	1 cut(s)	423
BanI	GGYRCC	1 cut(s)	617
BanII	GRGCYC	1 cut(s)	207
BauI	CACGAG	2 cut(s)	679, 821
BbrPI	CACGTG	2 cut(s)	444, 831
Bbv12I	GWGCWC	2 cut(s)	207, 680
BbvCI	CCTCAGC	1 cut(s)	407
BbvI	GCAGC	4 cut(s)	245, 587, 726, 846
BccI	CCATC	1 cut(s)	13
BceAI	ACGGC	5 cut(s)	118, 564, 767, 774, 848
BcgI	CGANNNNNNTGC	2 cut(s)	685, 719
BciT130I	CCWGG	5 cut(s)	120, 170, 277, 298, 845
BcnI	CCSGG	4 cut(s)	149, 526, 710, 839
BcoDI	GTCTC	2 cut(s)	526, 781
BfoI	RGCGCY	2 cut(s)	621, 810
BfuAI	ACCTGC	1 cut(s)	188
BmcAI	AGTACT	1 cut(s)	128
Bme1390I	CCNGG	9 cut(s)	120, 149, 170, 277, 298, 526, 710, 839, 845
Bme18I	GGWCC	2 cut(s)	145, 841
BmeRI	GACNNNNNGTC	1 cut(s)	889
BmgBI	CACGTC	1 cut(s)	735
BmgT120I	GGNCC	4 cut(s)	145, 172, 760, 841
BmiI	GGNNCC	7 cut(s)	147, 251, 330, 425, 479, 530, 619
BmrFI	CCNGG	9 cut(s)	120, 149, 170, 277, 298, 526, 710, 839, 845
BmsI	GCATC	2 cut(s)	245, 348
BpmI	CTGGAG	3 cut(s)	115, 377, 608
Bpu10I	CCTNAGC	2 cut(s)	407, 497
BpuEI	CTTGAG	1 cut(s)	98
BpuMI	CCSGG	4 cut(s)	149, 526, 710, 839
BsaAI	YACGTR	2 cut(s)	444, 831
BsaHI	GRCGYC	4 cut(s)	216, 450, 618, 902
BsaJI	CCNNGG	3 cut(s)	168, 552, 613
BsaWI	WCCGGW	4 cut(s)	95, 246, 420, 919
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 142, 169, 338, 724, 844, 937
Bse118I	RCCGGY	5 cut(s)	71, 88, 95, 338, 898
Bse1I	ACTGG	1 cut(s)	601
BseAI	TCCGGA	1 cut(s)	420
BseBI	CCWGG	5 cut(s)	120, 170, 277, 298, 845
BseDI	CCNNGG	3 cut(s)	168, 552, 613
BseGI	GGATG	1 cut(s)	417
BseLI	CCNNNNNNNGG	7 cut(s)	95, 142, 169, 338, 724, 844, 937
BseMII	CTCAG	2 cut(s)	421, 488
BseNI	ACTGG	1 cut(s)	601
BsePI	GCGCGC	1 cut(s)	790
BseRI	GAGGAG	3 cut(s)	20, 307, 395
BseSI	GKGCMC	1 cut(s)	930
BseX3I	CGGCCG	1 cut(s)	232
BseXI	GCAGC	4 cut(s)	245, 587, 726, 846
BsgI	GTGCAG	2 cut(s)	586, 853
Bsh1236I	CGCG	3 cut(s)	371, 554, 792
Bsh1285I	CGRYCG	4 cut(s)	235, 247, 709, 774
BshFI	GGCC	7 cut(s)	105, 152, 173, 227, 234, 761, 863
BshNI	GGYRCC	1 cut(s)	617
BshTI	ACCGGT	1 cut(s)	95
BsiEI	CGRYCG	4 cut(s)	235, 247, 709, 774
BsiHKAI	GWGCWC	2 cut(s)	207, 680
BslFI	GGGAC	4 cut(s)	131, 655, 683, 725
BslI	CCNNNNNNNGG	7 cut(s)	95, 142, 169, 338, 724, 844, 937
BsmAI	GTCTC	2 cut(s)	526, 781
BsmBI	CGTCTC	2 cut(s)	526, 781
BsmFI	GGGAC	4 cut(s)	131, 655, 683, 725
BsnI	GGCC	7 cut(s)	105, 152, 173, 227, 234, 761, 863
Bsp1286I	GDGCHC	3 cut(s)	207, 680, 930
Bsp13I	TCCGGA	1 cut(s)	420
Bsp1407I	TGTACA	1 cut(s)	801
Bsp143I	GATC	3 cut(s)	423, 471, 486
BspANI	GGCC	7 cut(s)	105, 152, 173, 227, 234, 761, 863
BspCNI	CTCAG	2 cut(s)	420, 489
BspEI	TCCGGA	1 cut(s)	420
BspFNI	CGCG	3 cut(s)	371, 554, 792
BspLI	GGNNCC	7 cut(s)	147, 251, 330, 425, 479, 530, 619
BspMI	ACCTGC	1 cut(s)	188
BspPI	GGATC	3 cut(s)	418, 431, 479
BspQI	GCTCTTC	2 cut(s)	212, 287
BspT107I	GGYRCC	1 cut(s)	617
BsrBI	CCGCTC	2 cut(s)	290, 323
BsrFI	RCCGGY	5 cut(s)	71, 88, 95, 338, 898
BsrGI	TGTACA	1 cut(s)	801
BsrI	ACTGG	1 cut(s)	601
BssAI	RCCGGY	5 cut(s)	71, 88, 95, 338, 898
BssECI	CCNNGG	3 cut(s)	168, 552, 613
BssHII	GCGCGC	1 cut(s)	790
BssMI	GATC	3 cut(s)	423, 471, 486
BssNI	GRCGYC	4 cut(s)	216, 450, 618, 902
BssSI	CACGAG	2 cut(s)	679, 821
Bst2BI	CACGAG	2 cut(s)	679, 821
Bst2UI	CCWGG	5 cut(s)	120, 170, 277, 298, 845
Bst4CI	ACNGT	2 cut(s)	145, 775
Bst6I	CTCTTC	3 cut(s)	212, 287, 592
BstACI	GRCGYC	4 cut(s)	216, 450, 618, 902
BstAPI	GCANNNNNTGC	1 cut(s)	609
BstAUI	TGTACA	1 cut(s)	801
BstBAI	YACGTR	2 cut(s)	444, 831
BstC8I	GCNNGC	9 cut(s)	107, 229, 340, 694, 719, 744, 792, 861, 900
BstDEI	CTNAG	2 cut(s)	407, 497
BstDSI	CCRYGG	1 cut(s)	552
BstEII	GGTNACC	1 cut(s)	91
BstF5I	GGATG	1 cut(s)	417
BstFNI	CGCG	3 cut(s)	371, 554, 792
BstH2I	RGCGCY	2 cut(s)	621, 810
BstHHI	GCGC	5 cut(s)	373, 620, 792, 794, 809
BstKTI	GATC	3 cut(s)	426, 474, 489
BstMAI	GTCTC	2 cut(s)	526, 781
BstMBI	GATC	3 cut(s)	423, 471, 486
BstMCI	CGRYCG	4 cut(s)	235, 247, 709, 774
BstMWI	GCNNNNNNNGC	9 cut(s)	115, 258, 293, 302, 335, 498, 609, 727, 736
BstNI	CCWGG	5 cut(s)	120, 170, 277, 298, 845
BstNSI	RCATGY	1 cut(s)	856
BstPI	GGTNACC	1 cut(s)	91
BstSCI	CCNGG	9 cut(s)	118, 147, 168, 275, 296, 524, 708, 837, 843
BstSLI	GKGCMC	1 cut(s)	930
BstUI	CGCG	3 cut(s)	371, 554, 792
BstV1I	GCAGC	4 cut(s)	245, 587, 726, 846
BstX2I	RGATCY	1 cut(s)	423
BstYI	RGATCY	1 cut(s)	423
BstZI	CGGCCG	1 cut(s)	232
BsuRI	GGCC	7 cut(s)	105, 152, 173, 227, 234, 761, 863
BtgI	CCRYGG	1 cut(s)	552
BtgZI	GCGATG	1 cut(s)	879
BtrI	CACGTC	1 cut(s)	735
BtsCI	GGATG	1 cut(s)	417
BtsIMutI	CAGTG	1 cut(s)	594
BveI	ACCTGC	1 cut(s)	188
Cac8I	GCNNGC	9 cut(s)	107, 229, 340, 694, 719, 744, 792, 861, 900
CaiI	CAGNNNCTG	1 cut(s)	631
CfoI	GCGC	5 cut(s)	373, 620, 792, 794, 809
Cfr10I	RCCGGY	5 cut(s)	71, 88, 95, 338, 898
Cfr13I	GGNCC	4 cut(s)	145, 172, 760, 841
Cfr42I	CCGCGG	1 cut(s)	555
CseI	GACGC	4 cut(s)	205, 377, 458, 891
Csp6I	GTAC	2 cut(s)	127, 802
CspAI	ACCGGT	1 cut(s)	95
CviAII	CATG	3 cut(s)	724, 853, 937
CviQI	GTAC	2 cut(s)	127, 802
DdeI	CTNAG	2 cut(s)	407, 497
DinI	GGCGCC	1 cut(s)	619
DpnI	GATC	3 cut(s)	425, 473, 488
DpnII	GATC	3 cut(s)	423, 471, 486
DriI	GACNNNNNGTC	1 cut(s)	889
EaeI	YGGCCR	3 cut(s)	103, 232, 861
EagI	CGGCCG	1 cut(s)	232
Eam1104I	CTCTTC	3 cut(s)	212, 287, 592
Eam1105I	GACNNNNNGTC	1 cut(s)	889
EarI	CTCTTC	3 cut(s)	212, 287, 592
EciI	GGCGGA	3 cut(s)	187, 325, 769
Ecl136II	GAGCTC	1 cut(s)	205
EclXI	CGGCCG	1 cut(s)	232
Eco147I	AGGCCT	1 cut(s)	227
Eco24I	GRGCYC	1 cut(s)	207
Eco47I	GGWCC	2 cut(s)	145, 841
Eco47III	AGCGCT	1 cut(s)	808
Eco52I	CGGCCG	1 cut(s)	232
Eco53kI	GAGCTC	1 cut(s)	205
Eco57I	CTGAAG	1 cut(s)	653
Eco72I	CACGTG	2 cut(s)	444, 831
Eco91I	GGTNACC	1 cut(s)	91
EcoICRI	GAGCTC	1 cut(s)	205
EcoO65I	GGTNACC	1 cut(s)	91
EcoRII	CCWGG	5 cut(s)	118, 168, 275, 296, 843
EcoT38I	GRGCYC	1 cut(s)	207
EgeI	GGCGCC	1 cut(s)	619
EheI	GGCGCC	1 cut(s)	619
Esp3I	CGTCTC	2 cut(s)	526, 781
FaeI	CATG	3 cut(s)	727, 856, 940
FaiI	YATR	4 cut(s)	725, 797, 854, 938
FaqI	GGGAC	4 cut(s)	131, 655, 683, 725
FatI	CATG	3 cut(s)	723, 852, 936
FauI	CCCGC	3 cut(s)	632, 685, 822
FokI	GGATG	1 cut(s)	404
FriOI	GRGCYC	1 cut(s)	207
GlaI	GCGC	5 cut(s)	372, 619, 791, 793, 808
GsuI	CTGGAG	3 cut(s)	115, 377, 608
HaeII	RGCGCY	2 cut(s)	621, 810
HaeIII	GGCC	7 cut(s)	105, 152, 173, 227, 234, 761, 863
HgaI	GACGC	4 cut(s)	205, 377, 458, 891
HhaI	GCGC	5 cut(s)	373, 620, 792, 794, 809
Hin1I	GRCGYC	4 cut(s)	216, 450, 618, 902
Hin1II	CATG	3 cut(s)	727, 856, 940
Hin6I	GCGC	5 cut(s)	371, 618, 790, 792, 807
HinP1I	GCGC	5 cut(s)	371, 618, 790, 792, 807
HincII	GTYRAC	2 cut(s)	51, 220
HindII	GTYRAC	2 cut(s)	51, 220
HinfI	GANTC	2 cut(s)	562, 869
HphI	GGTGA	1 cut(s)	803
Hpy166II	GTNNAC	5 cut(s)	18, 51, 77, 220, 385
Hpy188I	TCNGA	2 cut(s)	354, 771
Hpy188III	TCNNGA	6 cut(s)	308, 394, 421, 559, 566, 625
Hpy8I	GTNNAC	5 cut(s)	18, 51, 77, 220, 385
Hpy99I	CGWCG	3 cut(s)	371, 649, 907
HpyAV	CCTTC	3 cut(s)	342, 359, 628
HpyCH4III	ACNGT	2 cut(s)	145, 775
HpyCH4IV	ACGT	4 cut(s)	443, 519, 734, 830
HpyCH4V	TGCA	3 cut(s)	603, 834, 877
HpyF10VI	GCNNNNNNNGC	9 cut(s)	115, 258, 293, 302, 335, 498, 609, 727, 736
HpyF3I	CTNAG	2 cut(s)	407, 497
HpySE526I	ACGT	4 cut(s)	443, 519, 734, 830
Hsp92I	GRCGYC	4 cut(s)	216, 450, 618, 902
Hsp92II	CATG	3 cut(s)	727, 856, 940
HspAI	GCGC	5 cut(s)	371, 618, 790, 792, 807
KasI	GGCGCC	1 cut(s)	617
Kpn2I	TCCGGA	1 cut(s)	420
KroI	GCCGGC	2 cut(s)	338, 898
KroNI	GCCGGC	2 cut(s)	340, 900
KspI	CCGCGG	1 cut(s)	555
Kzo9I	GATC	3 cut(s)	423, 471, 486
LguI	GCTCTTC	2 cut(s)	212, 287
LmnI	GCTCC	7 cut(s)	33, 249, 328, 334, 408, 483, 497
Lsp1109I	GCAGC	4 cut(s)	245, 587, 726, 846
LweI	GCATC	2 cut(s)	245, 348
MaeII	ACGT	4 cut(s)	443, 519, 734, 830
MaeIII	GTNAC	4 cut(s)	91, 98, 446, 581
MalI	GATC	3 cut(s)	425, 473, 488
MbiI	CCGCTC	2 cut(s)	290, 323
MboI	GATC	3 cut(s)	423, 471, 486
MboII	GAAGA	4 cut(s)	199, 274, 579, 760
MflI	RGATCY	1 cut(s)	423
MhlI	GDGCHC	3 cut(s)	207, 680, 930
Mly113I	GGCGCC	1 cut(s)	618
MmeI	TCCRAC	1 cut(s)	794
MreI	CGCCGGCG	2 cut(s)	338, 898
MroI	TCCGGA	1 cut(s)	420
MroNI	GCCGGC	2 cut(s)	338, 898
MspA1I	CMGCKG	2 cut(s)	554, 859
MspR9I	CCNGG	9 cut(s)	120, 149, 170, 277, 298, 526, 710, 839, 845
MvaI	CCWGG	5 cut(s)	120, 170, 277, 298, 845
MvnI	CGCG	3 cut(s)	371, 554, 792
MwoI	GCNNNNNNNGC	9 cut(s)	115, 258, 293, 302, 335, 498, 609, 727, 736
NaeI	GCCGGC	2 cut(s)	340, 900
NarI	GGCGCC	1 cut(s)	618
NciI	CCSGG	4 cut(s)	149, 526, 710, 839
NdeII	GATC	3 cut(s)	423, 471, 486
NgoMIV	GCCGGC	2 cut(s)	338, 898
NlaIII	CATG	3 cut(s)	727, 856, 940
NlaIV	GGNNCC	7 cut(s)	147, 251, 330, 425, 479, 530, 619
NmeAIII	GCCGAG	3 cut(s)	109, 226, 594
NmuCI	GTSAC	2 cut(s)	98, 446
NspI	RCATGY	1 cut(s)	856
PauI	GCGCGC	1 cut(s)	790
PceI	AGGCCT	1 cut(s)	227
PciSI	GCTCTTC	2 cut(s)	212, 287
PdiI	GCCGGC	2 cut(s)	340, 900
PfeI	GAWTC	2 cut(s)	562, 869
PflMI	CCANNNNNTGG	1 cut(s)	724
PinAI	ACCGGT	1 cut(s)	95
PluTI	GGCGCC	1 cut(s)	621
PmaCI	CACGTG	2 cut(s)	444, 831
PmlI	CACGTG	2 cut(s)	444, 831
Ppu21I	YACGTR	2 cut(s)	444, 831
Psp124BI	GAGCTC	1 cut(s)	207
Psp6I	CCWGG	5 cut(s)	118, 168, 275, 296, 843
PspCI	CACGTG	2 cut(s)	444, 831
PspEI	GGTNACC	1 cut(s)	91
PspGI	CCWGG	5 cut(s)	118, 168, 275, 296, 843
PspN4I	GGNNCC	7 cut(s)	147, 251, 330, 425, 479, 530, 619
PspPI	GGNCC	4 cut(s)	145, 172, 760, 841
PstNI	CAGNNNCTG	1 cut(s)	631
PsuI	RGATCY	1 cut(s)	423
PteI	GCGCGC	1 cut(s)	790
RsaI	GTAC	2 cut(s)	128, 803
RsaNI	GTAC	2 cut(s)	127, 802
SacI	GAGCTC	1 cut(s)	207
SacII	CCGCGG	1 cut(s)	555
SapI	GCTCTTC	2 cut(s)	212, 287
Sau3AI	GATC	3 cut(s)	423, 471, 486
Sau96I	GGNCC	4 cut(s)	145, 172, 760, 841
ScaI	AGTACT	1 cut(s)	128
ScrFI	CCNGG	9 cut(s)	120, 149, 170, 277, 298, 526, 710, 839, 845
SduI	GDGCHC	3 cut(s)	207, 680, 930
SfaNI	GCATC	2 cut(s)	245, 348
SfoI	GGCGCC	1 cut(s)	619
Sfr303I	CCGCGG	1 cut(s)	555
SgrAI	CRCCGGYG	2 cut(s)	338, 898
SgrBI	CCGCGG	1 cut(s)	555
SinI	GGWCC	2 cut(s)	145, 841
SmlI	CTYRAG	1 cut(s)	113
SmoI	CTYRAG	1 cut(s)	113
SseBI	AGGCCT	1 cut(s)	227
SspDI	GGCGCC	1 cut(s)	617
SstI	GAGCTC	1 cut(s)	207
StuI	AGGCCT	1 cut(s)	227
StyD4I	CCNGG	9 cut(s)	118, 147, 168, 275, 296, 524, 708, 837, 843
TaaI	ACNGT	2 cut(s)	145, 775
TaiI	ACGT	4 cut(s)	446, 522, 737, 833
TaqI	TCGA	4 cut(s)	189, 243, 567, 705
TatI	WGTACW	2 cut(s)	126, 801
TfiI	GAWTC	2 cut(s)	562, 869
TscAI	CASTG	1 cut(s)	601
TseFI	GTSAC	2 cut(s)	98, 446
TseI	GCWGC	4 cut(s)	258, 600, 739, 834
Tsp45I	GTSAC	2 cut(s)	98, 446
TspGWI	ACGGA	1 cut(s)	672
TspRI	CASTG	1 cut(s)	601
Van91I	CCANNNNNTGG	1 cut(s)	724
VpaK11BI	GGWCC	2 cut(s)	145, 841
XceI	RCATGY	1 cut(s)	856
XcmI	CCANNNNNNNNNTGG	1 cut(s)	304
ZrmI	AGTACT	1 cut(s)	128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.