Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG594800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGGAGAAATGTGGCCTCAGCTGGGCTCAGTGATTGCCAGTGCCATGTTTGCATATGCCATGTTTCAACAATACTTTCCTTATCAACTTCGACGCCCTATCGAAAAATATACCCAGAAATTGTTCGGCTATGTGTACCCTTACATCCATATTTCCTTTGATGAATATTCCGGCGAGTGGCGCACGCGCAGTGAACTCTTTGTTACCATCCAAAGCTACCTCAGCACCAAGTCCTCTACAGAAGTGAAACGGCTGAAAGCTCAAGATGTCAAGGACAGCAAGTCTTTAGTCCTGGCCATGGATGATAATGAAGAGGTGACAGATGAGTTTCAAGGCATTAAGCTGTGGTGGGCTGCCAGGAAAAACGCGCCTATACAATCTTCATTCTCCTTCTATCCTCGGTCCGATGAGAAGAGACATTATAAGCTGACCTTCCACAGACGCCACCGCGATATAATCACGGGGTCTTATCTTGACCATGTAAGGAAACAAGGCAAGGCAATAACAGTGAGCAACAGGCAAAGAAAGCTCTACATTAACAATCCAGCTGAGAATTGGTCTTATTACAAAGCAACTAAATGGAGCCATGTAGTTTTTGAGCACCCTGCAACATTTGAGACCATAGCAATGGAGCCGAAAAAGAAAAAGGAAATTGTCAATGACCTCATCAAGTTCAGCAAGGGGAAAGACTACTATGCGAAAATAGGGAAGCCTTGGAAGCGGGGTTATCTTCTGTATGGGCCACCAGGCACTGGTAAGTCCACCATGATTGCTGCCATGTCTAACCTCATGAACTATGATGTTTATGATCTTGAGCTGACCACGGTGAAGAACAACACTGAGCTGAGGAAGTTGCTGATTGAGACTCCAAACAGGGCTATTATTGTGATTGAGGACATTGATTGCTCGCTTGATCTCACGGGGCAACGAAAGAAGAAGAAGGAGAAAGAGAAGGATGATGAAGATACAGAGGAAAATGATCCGATTAAAAAAATGAAGGGAAGAGAAGAAAGCAAACGAAGCGAGGTTACGTTATCTGGGCTATTGAACTTCATTGATGGTATCTGGTCAGCTTGTGGAGGTGAAAGAATCATTGTGTTTACCACTAATTTTGTGGACAAACTTGATCCTGCTCTTATAAGAAGAGGAAGGATGGACAAACATATTGAATTGTCCTACTGTTGCTATGAAGCATTTAAAGTGCTGGCACGAAACTATTTGGATCTGGAGTCACATGAACTGTTTGGTACCATTGAACGGTTGTTGGGGGAGACCAACATGACTCCAGCTGATGTGGCAGAGAATTTGATGCCCAAATCGGATGCAGAGGATGCTGATTCTTGTTTGAAGGCCTTGATTGAAGCTCTTGAGACTGCAAAGGAGGAGGCAAGAGTGAAGGCTGAGGAAGAAATGAAACTGAAAGCAGAGGAAGAAGCCAAACTGAAGGCAGAGAAAGAAGCAAAACTGACAGAAGAGGAAGATGCAAAATTGAAGCCAGAGAAAGAAGAGAAGGAAAAGGTCGAGTCTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

510

Amino Acids

59.15

Weight (kDa)

6.58

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	26 - 119	3.5e-26	Domain associated at C-terminal with AAA
AAA	PF00004	243 - 392	1.4e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	394 - 467	9.8e-35	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	423, 1139
Acc65I	GGTACC	1 cut(s)	1247
AccB1I	GGYRCC	1 cut(s)	1247
AccB7I	CCANNNNNTGG	1 cut(s)	752
AccII	CGCG	3 cut(s)	187, 368, 450
AciI	CCGC	2 cut(s)	448, 721
AclWI	GGATC	3 cut(s)	974, 1121, 1230
AcoI	YGGCCR	1 cut(s)	294
AcsI	RAATTY	1 cut(s)	1303
AcuI	CTGAAG	1 cut(s)	1463
AcyI	GRCGYC	2 cut(s)	94, 442
AfaI	GTAC	2 cut(s)	137, 1249
AfiI	CCNNNNNNNGG	5 cut(s)	23, 177, 298, 752, 1257
AgsI	TTSAA	8 cut(s)	68, 332, 1048, 1169, 1256, 1348, 1361, 1492
AhdI	GACNNNNNGTC	1 cut(s)	280
AjnI	CCWGG	3 cut(s)	291, 356, 745
Alw21I	GWGCWC	1 cut(s)	603
Alw26I	GTCTC	5 cut(s)	409, 611, 857, 1265, 1364
AlwI	GGATC	3 cut(s)	974, 1121, 1230
AlwNI	CAGNNNCTG	1 cut(s)	752
AoxI	GGCC	4 cut(s)	14, 294, 740, 1350
ApeKI	GCWGC	2 cut(s)	353, 773
ApoI	RAATTY	1 cut(s)	1303
Asp700I	GAANNNNTTC	1 cut(s)	122
Asp718I	GGTACC	1 cut(s)	1247
AspLEI	GCGC	3 cut(s)	183, 189, 370
AspS9I	GGNCC	2 cut(s)	402, 740
AsuHPI	GGTGA	3 cut(s)	328, 838, 1094
AvaII	GGWCC	1 cut(s)	402
BalI	TGGCCA	1 cut(s)	296
BanI	GGYRCC	1 cut(s)	1247
BanII	GRGCYC	1 cut(s)	29
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
Bbv12I	GWGCWC	1 cut(s)	603
BbvCI	CCTCAGC	4 cut(s)	18, 221, 845, 1401
BbvI	GCAGC	2 cut(s)	340, 760
BccI	CCATC	3 cut(s)	215, 1052, 1147
BceAI	ACGGC	1 cut(s)	266
BciT130I	CCWGG	3 cut(s)	293, 358, 747
BcoDI	GTCTC	5 cut(s)	409, 611, 857, 1265, 1364
BfmI	CTRYAG	1 cut(s)	237
BisI	GCNGC	2 cut(s)	354, 774
BlsI	GCNGC	2 cut(s)	355, 775
Bme1390I	CCNGG	3 cut(s)	293, 358, 747
Bme18I	GGWCC	1 cut(s)	402
BmeRI	GACNNNNNGTC	1 cut(s)	280
BmgT120I	GGNCC	2 cut(s)	402, 740
BmiI	GGNNCC	3 cut(s)	584, 633, 1249
BmrFI	CCNGG	3 cut(s)	293, 358, 747
BmsI	GCATC	4 cut(s)	1299, 1312, 1321, 1471
BpmI	CTGGAG	2 cut(s)	1247, 1269
Bpu10I	CCTNAGC	4 cut(s)	18, 221, 845, 1401
BpuEI	CTTGAG	3 cut(s)	246, 833, 1388
BsaHI	GRCGYC	2 cut(s)	94, 442
BsaI	GGTCTC	2 cut(s)	611, 1265
BsaJI	CCNNGG	4 cut(s)	297, 398, 713, 822
Bsc4I	CCNNNNNNNGG	5 cut(s)	23, 177, 298, 752, 1257
Bse1I	ACTGG	2 cut(s)	39, 757
Bse3DI	GCAATG	1 cut(s)	633
BseBI	CCWGG	3 cut(s)	293, 358, 747
BseDI	CCNNGG	4 cut(s)	297, 398, 713, 822
BseGI	GGATG	7 cut(s)	144, 207, 307, 961, 1158, 1327, 1336
BseLI	CCNNNNNNNGG	5 cut(s)	23, 177, 298, 752, 1257
BseMI	GCAATG	1 cut(s)	633
BseMII	CTCAG	7 cut(s)	32, 42, 235, 540, 831, 836, 1392
BseNI	ACTGG	2 cut(s)	39, 757
BseRI	GAGGAG	1 cut(s)	1397
BseXI	GCAGC	2 cut(s)	340, 760
BseYI	CCCAGC	1 cut(s)	22
Bsh1236I	CGCG	3 cut(s)	187, 368, 450
BshFI	GGCC	4 cut(s)	16, 296, 742, 1352
BshNI	GGYRCC	1 cut(s)	1247
BsiHKAI	GWGCWC	1 cut(s)	603
BsiSI	CCGG	1 cut(s)	171
BslI	CCNNNNNNNGG	5 cut(s)	23, 177, 298, 752, 1257
BsmAI	GTCTC	5 cut(s)	409, 611, 857, 1265, 1364
BsnI	GGCC	4 cut(s)	16, 296, 742, 1352
Bso31I	GGTCTC	2 cut(s)	611, 1265
Bsp1286I	GDGCHC	2 cut(s)	29, 603
Bsp143I	GATC	5 cut(s)	808, 913, 979, 1126, 1222
Bsp19I	CCATGG	1 cut(s)	297
BspACI	CCGC	2 cut(s)	448, 721
BspANI	GGCC	4 cut(s)	16, 296, 742, 1352
BspCNI	CTCAG	7 cut(s)	31, 41, 234, 541, 832, 837, 1393
BspFNI	CGCG	3 cut(s)	187, 368, 450
BspHI	TCATGA	1 cut(s)	789
BspLI	GGNNCC	3 cut(s)	584, 633, 1249
BspPI	GGATC	3 cut(s)	974, 1121, 1230
BspT107I	GGYRCC	1 cut(s)	1247
BspTNI	GGTCTC	2 cut(s)	611, 1265
BsrDI	GCAATG	1 cut(s)	633
BsrI	ACTGG	2 cut(s)	39, 757
BssECI	CCNNGG	4 cut(s)	297, 398, 713, 822
BssMI	GATC	5 cut(s)	808, 913, 979, 1126, 1222
BssNI	GRCGYC	2 cut(s)	94, 442
BssT1I	CCWWGG	2 cut(s)	297, 713
Bst2UI	CCWGG	3 cut(s)	293, 358, 747
Bst4CI	ACNGT	5 cut(s)	508, 826, 1181, 1242, 1260
Bst6I	CTCTTC	6 cut(s)	306, 407, 997, 1138, 1467, 1500
BstACI	GRCGYC	2 cut(s)	94, 442
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstC8I	GCNNGC	3 cut(s)	185, 908, 1206
BstDEI	CTNAG	7 cut(s)	18, 28, 221, 549, 840, 845, 1401
BstDSI	CCRYGG	2 cut(s)	297, 822
BstF5I	GGATG	7 cut(s)	144, 207, 307, 961, 1158, 1327, 1336
BstFNI	CGCG	3 cut(s)	187, 368, 450
BstHHI	GCGC	3 cut(s)	183, 189, 370
BstKTI	GATC	5 cut(s)	811, 916, 982, 1129, 1225
BstMAI	GTCTC	5 cut(s)	409, 611, 857, 1265, 1364
BstMBI	GATC	5 cut(s)	808, 913, 979, 1126, 1222
BstMWI	GCNNNNNNNGC	8 cut(s)	50, 180, 222, 526, 718, 1020, 1295, 1331
BstNI	CCWGG	3 cut(s)	293, 358, 747
BstSCI	CCNGG	3 cut(s)	291, 356, 745
BstSFI	CTRYAG	1 cut(s)	237
BstUI	CGCG	3 cut(s)	187, 368, 450
BstV1I	GCAGC	2 cut(s)	340, 760
BstX2I	RGATCY	1 cut(s)	1222
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	1222
BsuRI	GGCC	4 cut(s)	16, 296, 742, 1352
BtgI	CCRYGG	2 cut(s)	297, 822
BtsCI	GGATG	7 cut(s)	144, 207, 307, 961, 1158, 1327, 1336
BtsI	GCAGTG	1 cut(s)	196
BtsIMutI	CAGTG	6 cut(s)	36, 46, 196, 513, 750, 837
Cac8I	GCNNGC	3 cut(s)	185, 908, 1206
CaiI	CAGNNNCTG	1 cut(s)	752
CciI	TCATGA	1 cut(s)	789
CfoI	GCGC	3 cut(s)	183, 189, 370
Cfr13I	GGNCC	2 cut(s)	402, 740
CpoI	CGGWCCG	1 cut(s)	402
CseI	GACGC	2 cut(s)	102, 450
Csp6I	GTAC	2 cut(s)	136, 1248
CspCI	CAANNNNNGTGG	4 cut(s)	751, 786, 1093, 1128
CspI	CGGWCCG	1 cut(s)	402
CviQI	GTAC	2 cut(s)	136, 1248
DdeI	CTNAG	7 cut(s)	18, 28, 221, 549, 840, 845, 1401
DpnI	GATC	5 cut(s)	810, 915, 981, 1128, 1224
DpnII	GATC	5 cut(s)	808, 913, 979, 1126, 1222
DraI	TTTAAA	1 cut(s)	1198
DriI	GACNNNNNGTC	1 cut(s)	280
EaeI	YGGCCR	1 cut(s)	294
Eam1104I	CTCTTC	6 cut(s)	306, 407, 997, 1138, 1467, 1500
Eam1105I	GACNNNNNGTC	1 cut(s)	280
EarI	CTCTTC	6 cut(s)	306, 407, 997, 1138, 1467, 1500
Eco130I	CCWWGG	2 cut(s)	297, 713
Eco147I	AGGCCT	1 cut(s)	1352
Eco24I	GRGCYC	1 cut(s)	29
Eco31I	GGTCTC	2 cut(s)	611, 1265
Eco47I	GGWCC	1 cut(s)	402
Eco57I	CTGAAG	1 cut(s)	1463
EcoRII	CCWGG	3 cut(s)	291, 356, 745
EcoT14I	CCWWGG	2 cut(s)	297, 713
EcoT38I	GRGCYC	1 cut(s)	29
ErhI	CCWWGG	2 cut(s)	297, 713
FalI	AAGNNNNNCTT	2 cut(s)	416, 448
FauI	CCCGC	1 cut(s)	714
FauNDI	CATATG	1 cut(s)	55
Fnu4HI	GCNGC	2 cut(s)	354, 774
FokI	GGATG	7 cut(s)	131, 194, 314, 968, 1165, 1334, 1343
FriOI	GRGCYC	1 cut(s)	29
Fsp4HI	GCNGC	2 cut(s)	354, 774
GlaI	GCGC	3 cut(s)	182, 188, 369
GluI	GCNGC	2 cut(s)	354, 774
GsaI	CCCAGC	1 cut(s)	26
GsuI	CTGGAG	2 cut(s)	1247, 1269
HaeIII	GGCC	4 cut(s)	16, 296, 742, 1352
HapII	CCGG	1 cut(s)	171
HgaI	GACGC	2 cut(s)	102, 450
HhaI	GCGC	3 cut(s)	183, 189, 370
Hin1I	GRCGYC	2 cut(s)	94, 442
Hin6I	GCGC	3 cut(s)	181, 187, 368
HinP1I	GCGC	3 cut(s)	181, 187, 368
HinfI	GANTC	6 cut(s)	865, 1089, 1229, 1282, 1337, 1523
HpaII	CCGG	1 cut(s)	171
HphI	GGTGA	3 cut(s)	328, 838, 1094
Hpy166II	GTNNAC	5 cut(s)	136, 194, 762, 1101, 1117
Hpy188I	TCNGA	3 cut(s)	406, 984, 1321
Hpy188III	TCNNGA	6 cut(s)	263, 473, 790, 812, 1226, 1367
Hpy8I	GTNNAC	5 cut(s)	136, 194, 762, 1101, 1117
Hpy99I	CGWCG	1 cut(s)	96
HpyCH4III	ACNGT	5 cut(s)	508, 826, 1181, 1242, 1260
HpyCH4IV	ACGT	1 cut(s)	1031
HpyCH4V	TGCA	5 cut(s)	53, 608, 1325, 1376, 1484
HpyF10VI	GCNNNNNNNGC	8 cut(s)	50, 180, 222, 526, 718, 1020, 1295, 1331
HpyF3I	CTNAG	7 cut(s)	18, 28, 221, 549, 840, 845, 1401
HpySE526I	ACGT	1 cut(s)	1031
Hsp92I	GRCGYC	2 cut(s)	94, 442
HspAI	GCGC	3 cut(s)	181, 187, 368
KpnI	GGTACC	1 cut(s)	1251
Kzo9I	GATC	5 cut(s)	808, 913, 979, 1126, 1222
LmnI	GCTCC	2 cut(s)	582, 631
Lsp1109I	GCAGC	2 cut(s)	340, 760
LweI	GCATC	4 cut(s)	1299, 1312, 1321, 1471
MaeII	ACGT	1 cut(s)	1031
MaeIII	GTNAC	4 cut(s)	202, 316, 1027, 1230
MalI	GATC	5 cut(s)	810, 915, 981, 1128, 1224
MboI	GATC	5 cut(s)	808, 913, 979, 1126, 1222
MflI	RGATCY	1 cut(s)	1222
MhlI	GDGCHC	2 cut(s)	29, 603
MlsI	TGGCCA	1 cut(s)	296
MluCI	AATT	7 cut(s)	119, 553, 651, 1108, 1169, 1303, 1487
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	4 cut(s)	859, 1238, 1276, 1532
Mox20I	TGGCCA	1 cut(s)	296
MroXI	GAANNNNTTC	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	296
MseI	TTAA	5 cut(s)	339, 537, 987, 1197, 1531
MslI	CAYNNNNRTG	1 cut(s)	626
Msp20I	TGGCCA	1 cut(s)	296
MspA1I	CMGCKG	3 cut(s)	22, 548, 1289
MspI	CCGG	1 cut(s)	171
MspR9I	CCNGG	3 cut(s)	293, 358, 747
MvaI	CCWGG	3 cut(s)	293, 358, 747
MvnI	CGCG	3 cut(s)	187, 368, 450
MwoI	GCNNNNNNNGC	8 cut(s)	50, 180, 222, 526, 718, 1020, 1295, 1331
NcoI	CCATGG	1 cut(s)	297
NdeI	CATATG	1 cut(s)	55
NdeII	GATC	5 cut(s)	808, 913, 979, 1126, 1222
NlaIV	GGNNCC	3 cut(s)	584, 633, 1249
NmuCI	GTSAC	2 cut(s)	316, 1230
PagI	TCATGA	1 cut(s)	789
PceI	AGGCCT	1 cut(s)	1352
PdmI	GAANNNNTTC	1 cut(s)	122
PfeI	GAWTC	2 cut(s)	1089, 1337
PflMI	CCANNNNNTGG	1 cut(s)	752
PkrI	GCNGC	2 cut(s)	355, 775
PleI	GAGTC	4 cut(s)	859, 1237, 1276, 1531
PpsI	GAGTC	4 cut(s)	859, 1237, 1276, 1531
PsiI	TTATAA	2 cut(s)	423, 1139
Psp6I	CCWGG	3 cut(s)	291, 356, 745
PspFI	CCCAGC	1 cut(s)	22
PspGI	CCWGG	3 cut(s)	291, 356, 745
PspN4I	GGNNCC	3 cut(s)	584, 633, 1249
PspPI	GGNCC	2 cut(s)	402, 740
PstNI	CAGNNNCTG	1 cut(s)	752
PsuI	RGATCY	1 cut(s)	1222
PvuII	CAGCTG	3 cut(s)	22, 548, 1289
RsaI	GTAC	2 cut(s)	137, 1249
RsaNI	GTAC	2 cut(s)	136, 1248
RseI	CAYNNNNRTG	1 cut(s)	626
Rsr2I	CGGWCCG	1 cut(s)	402
RsrII	CGGWCCG	1 cut(s)	402
SaqAI	TTAA	5 cut(s)	339, 537, 987, 1197, 1531
SatI	GCNGC	2 cut(s)	354, 774
Sau3AI	GATC	5 cut(s)	808, 913, 979, 1126, 1222
Sau96I	GGNCC	2 cut(s)	402, 740
SchI	GAGTC	4 cut(s)	859, 1238, 1276, 1532
ScrFI	CCNGG	3 cut(s)	293, 358, 747
SduI	GDGCHC	2 cut(s)	29, 603
SfaNI	GCATC	4 cut(s)	1299, 1312, 1321, 1471
SfcI	CTRYAG	1 cut(s)	237
SinI	GGWCC	1 cut(s)	402
SmiMI	CAYNNNNRTG	1 cut(s)	626
SmlI	CTYRAG	3 cut(s)	261, 812, 1367
SmoI	CTYRAG	3 cut(s)	261, 812, 1367
Sse9I	AATT	7 cut(s)	119, 553, 651, 1108, 1169, 1303, 1487
SseBI	AGGCCT	1 cut(s)	1352
SsiI	CCGC	2 cut(s)	448, 721
SspI	AATATT	1 cut(s)	167
StuI	AGGCCT	1 cut(s)	1352
StyD4I	CCNGG	3 cut(s)	291, 356, 745
StyI	CCWWGG	2 cut(s)	297, 713
TaaI	ACNGT	5 cut(s)	508, 826, 1181, 1242, 1260
TaiI	ACGT	1 cut(s)	1034
TaqI	TCGA	3 cut(s)	91, 102, 1521
TaqII	GACCGA	1 cut(s)	390
TasI	AATT	7 cut(s)	119, 553, 651, 1108, 1169, 1303, 1487
TfiI	GAWTC	2 cut(s)	1089, 1337
Tru1I	TTAA	5 cut(s)	339, 537, 987, 1197, 1531
Tru9I	TTAA	5 cut(s)	339, 537, 987, 1197, 1531
TscAI	CASTG	6 cut(s)	36, 46, 196, 513, 757, 844
TseFI	GTSAC	2 cut(s)	316, 1230
TseI	GCWGC	2 cut(s)	353, 773
Tsp45I	GTSAC	2 cut(s)	316, 1230
TspRI	CASTG	6 cut(s)	36, 46, 196, 513, 757, 844
Van91I	CCANNNNNTGG	1 cut(s)	752
VpaK11BI	GGWCC	1 cut(s)	402
XapI	RAATTY	1 cut(s)	1303
XcmI	CCANNNNNNNNNTGG	2 cut(s)	552, 1111
XmnI	GAANNNNTTC	1 cut(s)	122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.