Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

2057684 .. 2059261

Gene Structure 1578 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g03400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGTTGAAAATGGGGGATATGTGGGGGCAGCTCGGCTCGGTGATGGCGAGCATGATGTTTGCTTATGCCATGTTCAAGCAATTCTTCCCAGACAATCTCGGCGATATCCTTGAAAAATACGGTCAGAAATTAGTAGCCTATGTCTACCCCTACATCCAAATCACCTTCGACGAATACGACAGCGACTTTTACCGGCGGAGCGAGGTCTACTCCGCCATCCAGAACTACCTCAGTACGAAATCCTCGACGCTGGCGAAGCGCCTCAAGGCTCATGAGGTTAAAGGAAGCAAGGCTTTGGTTTTAGGCATGGACGACAACGAGGAGGTCACCGACGAGTTCGAGGGTGTCAAGCTCTGGTGGGCGTCCAAGAAGAGCGCGACGAAAAAGGCATCCTTTTCGTTCTTTCCCGATTACGATGAGAGGAAGATGTACAAGCTGACGTTCCACCGCCGGCATAGGGACGTTATCATGGGGTCGTATCTTGACCATGTGAGGCAGGAGGGGAAGGCGATCGCGGTTAAGAACAGGCAGCGGAAGCTCTACATTAACAACACCGGAAAGGGCACGAAATGGAGCCATGTGGTGTTTGAGCATCCGGCGACATTTGAGACATTGGCGATGGATCCGAAGGAGAAACAGTCGATAATTAACGATCTTTTGAAGTTCGGAAAGGGGAAGGACTACTATAAGAAAATCGGGAAGGCTTGGAAGAGGGGTTACCTCCTTTACGGGCCACCGGGGACAGGGAAGTCCACCATGATCTCCGCCATATCGAACTTAATGAATTATGATGTCTATGATCTAGAGCTGACCGCGGTCAAGGACAACACCGAGCTGAGAAAGCTGCTGATTGACATATCCGGTAAGGCGATTATTGTGATTGAGGACATTGATTGCTCGCTTGATCTTACCGGGCAGCGAAAGAAGAAGAAAGTAGAGGAGGCCAAAGATGGTGATGAAAAGGATCAAATTCTGAAAAAGCCGGAAGAAGAAGAGAACACAACTAGCAAGGTGACTCTTTCGGGGCTGCTGAATTTTATCGATGGCATTTGGTCTGCGTGTGGAGGGGAGAGACTGATCGTGTTTACGACTAATTATGTGGATAAACTCGATCCTGCTCTGATTAGAAGAGGAAGGATGGACAAGCACATAAAACTGTCCTACTGCTGCTACGAGGCGTTCAAAGTTCTTGCTAGGAATTATTTGGATTTGGAAACGCACGAGTTGTTTGGAACCATTGAGCGCTTGTTGGGAGAGACCGACATGACACCTGCCGATGTTGCGGAGAATTTGATGCCAAAATCTGATGTGGAGGATGCTGAGTCGTGTTTGAAGAACTTGATTGAAGCGCTCGAGGCTGCTAAGGAAGCGGCGAGAGTGAAGGCGGAGGAGGTAGCAAAACAGAAGGCGGAGGAAGAAGCGAAACAGAAGGCGGAGGAAGAAGGGAAATTGAAGGCGGAGGAAGAAGAAAAGGACAAGAAAGACAAGAAAGATGAATCTACCAAAGAGGTAGTGAAATGTAATGGAACATTAGCTGAAAAGGTCGAGGAAAATGGAGTCACCCCATTAATAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

526

Amino Acids

59.89

Weight (kDa)

6.08

Isoelectric Point (pI)

33.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	29 - 123	2.1e-27	Domain associated at C-terminal with AAA
AAA	PF00004	240 - 304	2.4e-08	ATPase family associated with various cellular activities (AAA)
AAA	PF00004	319 - 387	1.2e-08	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	389 - 462	3.7e-34	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1279
AasI	GACNNNNNNGTC	1 cut(s)	748
Acc36I	ACCTGC	1 cut(s)	1279
AccI	GTMKAC	2 cut(s)	144, 207
AccII	CGCG	3 cut(s)	377, 515, 815
AclWI	GGATC	4 cut(s)	617, 630, 972, 1106
AcsI	RAATTY	3 cut(s)	969, 1033, 1288
AcyI	GRCGYC	1 cut(s)	362
AfaI	GTAC	2 cut(s)	235, 431
AfeI	AGCGCT	2 cut(s)	1244, 1350
AfiI	CCNNNNNNNGG	2 cut(s)	457, 743
AgsI	TTSAA	8 cut(s)	7, 76, 113, 661, 1183, 1333, 1346, 1453
AluBI	AGCT	8 cut(s)	31, 352, 436, 538, 808, 835, 844, 1535
AluI	AGCT	8 cut(s)	31, 352, 436, 538, 808, 835, 844, 1535
Alw26I	GTCTC	3 cut(s)	602, 1066, 1250
AlwI	GGATC	4 cut(s)	617, 630, 972, 1106
Ama87I	CYCGRG	1 cut(s)	1352
Aor51HI	AGCGCT	2 cut(s)	1244, 1350
AoxI	GGCC	2 cut(s)	731, 942
ApeKI	GCWGC	7 cut(s)	28, 529, 844, 916, 1027, 1167, 1358
ApoI	RAATTY	3 cut(s)	969, 1033, 1288
AseI	ATTAAT	1 cut(s)	1568
AsiSI	GCGATCGC	1 cut(s)	513
AspLEI	GCGC	4 cut(s)	261, 377, 1245, 1351
AspS9I	GGNCC	1 cut(s)	731
AsuC2I	CCSGG	2 cut(s)	738, 913
AsuHPI	GGTGA	6 cut(s)	52, 154, 319, 965, 1024, 1552
AvaI	CYCGRG	1 cut(s)	1352
BaeGI	GKGCMC	1 cut(s)	566
BamHI	GGATCC	1 cut(s)	622
BarI	GAAGNNNNNNTAC	2 cut(s)	701, 733
BauI	CACGAG	1 cut(s)	1220
BbvI	GCAGC	7 cut(s)	40, 541, 831, 928, 1014, 1154, 1345
BccI	CCATC	6 cut(s)	37, 224, 613, 944, 1037, 1132
BcgI	CGANNNNNNTGC	2 cut(s)	378, 412
BcnI	CCSGG	2 cut(s)	738, 913
BcoDI	GTCTC	3 cut(s)	602, 1066, 1250
BfaI	CTAG	3 cut(s)	803, 1005, 1194
BfoI	RGCGCY	3 cut(s)	262, 1246, 1352
BfuAI	ACCTGC	1 cut(s)	1279
BisI	GCNGC	8 cut(s)	29, 530, 845, 917, 1028, 1168, 1359, 1371
BlsI	GCNGC	8 cut(s)	30, 531, 846, 918, 1029, 1169, 1360, 1372
Bme1390I	CCNGG	2 cut(s)	738, 913
BmeT110I	CYCGRG	1 cut(s)	1352
BmgT120I	GGNCC	1 cut(s)	731
BmiI	GGNNCC	3 cut(s)	575, 624, 1234
BmrFI	CCNGG	2 cut(s)	738, 913
BmsI	GCATC	4 cut(s)	398, 601, 1284, 1306
BoxI	GACNNNNGTC	1 cut(s)	815
BplI	GAGNNNNNCTC	2 cut(s)	194, 226
Bpu10I	CCTNAGC	1 cut(s)	1362
BpuEI	CTTGAG	1 cut(s)	248
BpuMI	CCSGG	2 cut(s)	738, 913
Bsa29I	ATCGAT	1 cut(s)	1041
BsaHI	GRCGYC	1 cut(s)	362
BsaI	GGTCTC	1 cut(s)	1250
BsaJI	CCNNGG	2 cut(s)	737, 813
BsaWI	WCCGGW	2 cut(s)	554, 860
BsaXI	ACNNNNNCTCC	2 cut(s)	623, 653
Bsc4I	CCNNNNNNNGG	2 cut(s)	457, 743
Bse118I	RCCGGY	2 cut(s)	192, 450
BseCI	ATCGAT	1 cut(s)	1041
BseDI	CCNNGG	2 cut(s)	737, 813
BseGI	GGATG	6 cut(s)	153, 216, 389, 592, 1143, 1321
BseLI	CCNNNNNNNGG	2 cut(s)	457, 743
BseMII	CTCAG	3 cut(s)	244, 827, 1311
BseRI	GAGGAG	3 cut(s)	335, 953, 1403
BseSI	GKGCMC	1 cut(s)	566
BseXI	GCAGC	7 cut(s)	40, 541, 831, 928, 1014, 1154, 1345
Bsh1236I	CGCG	3 cut(s)	377, 515, 815
Bsh1285I	CGRYCG	1 cut(s)	513
BshFI	GGCC	2 cut(s)	733, 944
BshVI	ATCGAT	1 cut(s)	1041
BsiEI	CGRYCG	1 cut(s)	513
BsiHKCI	CYCGRG	1 cut(s)	1352
BsiSI	CCGG	8 cut(s)	193, 451, 555, 596, 737, 861, 912, 983
BslFI	GGGAC	2 cut(s)	473, 754
BslI	CCNNNNNNNGG	2 cut(s)	457, 743
BsmAI	GTCTC	3 cut(s)	602, 1066, 1250
BsmFI	GGGAC	2 cut(s)	473, 754
BsnI	GGCC	2 cut(s)	733, 944
Bso31I	GGTCTC	1 cut(s)	1250
BsoBI	CYCGRG	1 cut(s)	1352
Bsp1286I	GDGCHC	1 cut(s)	566
Bsp1407I	TGTACA	1 cut(s)	429
Bsp143I	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
BspANI	GGCC	2 cut(s)	733, 944
BspCNI	CTCAG	3 cut(s)	243, 828, 1312
BspDI	ATCGAT	1 cut(s)	1041
BspFNI	CGCG	3 cut(s)	377, 515, 815
BspHI	TCATGA	1 cut(s)	271
BspLI	GGNNCC	3 cut(s)	575, 624, 1234
BspMI	ACCTGC	1 cut(s)	1279
BspPI	GGATC	4 cut(s)	617, 630, 972, 1106
BspQI	GCTCTTC	1 cut(s)	365
BspTNI	GGTCTC	1 cut(s)	1250
BsrFI	RCCGGY	2 cut(s)	192, 450
BsrGI	TGTACA	1 cut(s)	429
BssAI	RCCGGY	2 cut(s)	192, 450
BssECI	CCNNGG	2 cut(s)	737, 813
BssMI	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
BssNI	GRCGYC	1 cut(s)	362
BssSI	CACGAG	1 cut(s)	1220
Bst2BI	CACGAG	1 cut(s)	1220
Bst4CI	ACNGT	3 cut(s)	122, 639, 1158
Bst6I	CTCTTC	4 cut(s)	365, 704, 987, 1123
BstACI	GRCGYC	1 cut(s)	362
BstAUI	TGTACA	1 cut(s)	429
BstC8I	GCNNGC	4 cut(s)	49, 252, 452, 899
BstDEI	CTNAG	4 cut(s)	230, 836, 1320, 1362
BstDSI	CCRYGG	1 cut(s)	813
BstEII	GGTNACC	2 cut(s)	325, 716
BstF5I	GGATG	6 cut(s)	153, 216, 389, 592, 1143, 1321
BstFNI	CGCG	3 cut(s)	377, 515, 815
BstH2I	RGCGCY	3 cut(s)	262, 1246, 1352
BstHHI	GCGC	4 cut(s)	261, 377, 1245, 1351
BstKTI	GATC	9 cut(s)	513, 625, 655, 762, 802, 907, 967, 1080, 1114
BstMAI	GTCTC	3 cut(s)	602, 1066, 1250
BstMBI	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
BstMCI	CGRYCG	1 cut(s)	513
BstMWI	GCNNNNNNNGC	6 cut(s)	256, 535, 841, 1280, 1355, 1367
BstPAI	GACNNNNGTC	1 cut(s)	815
BstPI	GGTNACC	2 cut(s)	325, 716
BstSCI	CCNGG	2 cut(s)	736, 911
BstSLI	GKGCMC	1 cut(s)	566
BstUI	CGCG	3 cut(s)	377, 515, 815
BstV1I	GCAGC	7 cut(s)	40, 541, 831, 928, 1014, 1154, 1345
BstX2I	RGATCY	1 cut(s)	622
BstYI	RGATCY	1 cut(s)	622
Bsu15I	ATCGAT	1 cut(s)	1041
BsuRI	GGCC	2 cut(s)	733, 944
BsuTUI	ATCGAT	1 cut(s)	1041
BtgI	CCRYGG	1 cut(s)	813
BtgZI	GCGATG	1 cut(s)	632
BtsCI	GGATG	6 cut(s)	153, 216, 389, 592, 1143, 1321
BveI	ACCTGC	1 cut(s)	1279
Cac8I	GCNNGC	4 cut(s)	49, 252, 452, 899
CciI	TCATGA	1 cut(s)	271
CfoI	GCGC	4 cut(s)	261, 377, 1245, 1351
Cfr10I	RCCGGY	2 cut(s)	192, 450
Cfr13I	GGNCC	1 cut(s)	731
Cfr42I	CCGCGG	1 cut(s)	816
ClaI	ATCGAT	1 cut(s)	1041
CseI	GACGC	2 cut(s)	256, 351
Csp6I	GTAC	2 cut(s)	234, 430
CviAII	CATG	9 cut(s)	52, 70, 272, 307, 469, 488, 578, 757, 1264
CviQI	GTAC	2 cut(s)	234, 430
DdeI	CTNAG	4 cut(s)	230, 836, 1320, 1362
DpnI	GATC	9 cut(s)	512, 624, 654, 761, 801, 906, 966, 1079, 1113
DpnII	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
DrdI	GACNNNNNNGTC	1 cut(s)	748
DseDI	GACNNNNNNGTC	1 cut(s)	748
Eam1104I	CTCTTC	4 cut(s)	365, 704, 987, 1123
EarI	CTCTTC	4 cut(s)	365, 704, 987, 1123
EciI	GGCGGA	7 cut(s)	202, 211, 754, 1400, 1424, 1448, 1472
Eco31I	GGTCTC	1 cut(s)	1250
Eco32I	GATATC	1 cut(s)	106
Eco47III	AGCGCT	2 cut(s)	1244, 1350
Eco88I	CYCGRG	1 cut(s)	1352
Eco91I	GGTNACC	2 cut(s)	325, 716
EcoO65I	GGTNACC	2 cut(s)	325, 716
EcoRV	GATATC	1 cut(s)	106
FaeI	CATG	9 cut(s)	55, 73, 275, 310, 472, 491, 581, 760, 1267
FalI	AAGNNNNNCTT	6 cut(s)	68, 100, 277, 309, 377, 409
FaqI	GGGAC	2 cut(s)	473, 754
FatI	CATG	9 cut(s)	51, 69, 271, 306, 468, 487, 577, 756, 1263
FblI	GTMKAC	2 cut(s)	144, 207
Fnu4HI	GCNGC	8 cut(s)	29, 530, 845, 917, 1028, 1168, 1359, 1371
FokI	GGATG	6 cut(s)	140, 203, 376, 579, 1150, 1328
Fsp4HI	GCNGC	8 cut(s)	29, 530, 845, 917, 1028, 1168, 1359, 1371
FspBI	CTAG	3 cut(s)	803, 1005, 1194
GlaI	GCGC	4 cut(s)	260, 376, 1244, 1350
GluI	GCNGC	8 cut(s)	29, 530, 845, 917, 1028, 1168, 1359, 1371
HaeII	RGCGCY	3 cut(s)	262, 1246, 1352
HaeIII	GGCC	2 cut(s)	733, 944
HapII	CCGG	8 cut(s)	193, 451, 555, 596, 737, 861, 912, 983
HgaI	GACGC	2 cut(s)	256, 351
HhaI	GCGC	4 cut(s)	261, 377, 1245, 1351
Hin1I	GRCGYC	1 cut(s)	362
Hin1II	CATG	9 cut(s)	55, 73, 275, 310, 472, 491, 581, 760, 1267
Hin6I	GCGC	4 cut(s)	259, 375, 1243, 1349
HinP1I	GCGC	4 cut(s)	259, 375, 1243, 1349
HinfI	GANTC	4 cut(s)	1015, 1322, 1496, 1557
HpaII	CCGG	8 cut(s)	193, 451, 555, 596, 737, 861, 912, 983
HphI	GGTGA	6 cut(s)	52, 154, 319, 965, 1024, 1552
Hpy166II	GTNNAC	4 cut(s)	145, 208, 753, 1086
Hpy188I	TCNGA	6 cut(s)	126, 627, 668, 975, 1122, 1306
Hpy188III	TCNNGA	6 cut(s)	220, 272, 407, 482, 697, 803
Hpy8I	GTNNAC	4 cut(s)	145, 208, 753, 1086
Hpy99I	CGWCG	4 cut(s)	173, 250, 335, 382
HpyCH4III	ACNGT	3 cut(s)	122, 639, 1158
HpyCH4IV	ACGT	2 cut(s)	440, 462
HpyF10VI	GCNNNNNNNGC	6 cut(s)	256, 535, 841, 1280, 1355, 1367
HpyF3I	CTNAG	4 cut(s)	230, 836, 1320, 1362
HpySE526I	ACGT	2 cut(s)	440, 462
Hsp92I	GRCGYC	1 cut(s)	362
Hsp92II	CATG	9 cut(s)	55, 73, 275, 310, 472, 491, 581, 760, 1267
HspAI	GCGC	4 cut(s)	259, 375, 1243, 1349
KroI	GCCGGC	1 cut(s)	450
KroNI	GCCGGC	1 cut(s)	452
KspI	CCGCGG	1 cut(s)	816
Kzo9I	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	2 cut(s)	198, 573
Lsp1109I	GCAGC	7 cut(s)	40, 541, 831, 928, 1014, 1154, 1345
LweI	GCATC	4 cut(s)	398, 601, 1284, 1306
MaeI	CTAG	3 cut(s)	803, 1005, 1194
MaeII	ACGT	2 cut(s)	440, 462
MaeIII	GTNAC	4 cut(s)	325, 716, 1012, 1558
MalI	GATC	9 cut(s)	512, 624, 654, 761, 801, 906, 966, 1079, 1113
MboI	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
MflI	RGATCY	1 cut(s)	622
MhlI	GDGCHC	1 cut(s)	566
MlyI	GAGTC	3 cut(s)	1009, 1331, 1566
MroNI	GCCGGC	1 cut(s)	450
MseI	TTAA	6 cut(s)	279, 519, 546, 648, 779, 1568
MspA1I	CMGCKG	2 cut(s)	532, 815
MspI	CCGG	8 cut(s)	193, 451, 555, 596, 737, 861, 912, 983
MspR9I	CCNGG	2 cut(s)	738, 913
MvnI	CGCG	3 cut(s)	377, 515, 815
MwoI	GCNNNNNNNGC	6 cut(s)	256, 535, 841, 1280, 1355, 1367
NaeI	GCCGGC	1 cut(s)	452
NciI	CCSGG	2 cut(s)	738, 913
NdeII	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
NgoMIV	GCCGGC	1 cut(s)	450
NlaIII	CATG	9 cut(s)	55, 73, 275, 310, 472, 491, 581, 760, 1267
NlaIV	GGNNCC	3 cut(s)	575, 624, 1234
NmeAIII	GCCGAG	2 cut(s)	12, 78
NmuCI	GTSAC	3 cut(s)	325, 1012, 1558
PaeR7I	CTCGAG	1 cut(s)	1352
PagI	TCATGA	1 cut(s)	271
PaqCI	CACCTGC	1 cut(s)	1279
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	4 cut(s)	44, 174, 242, 251
PdiI	GCCGGC	1 cut(s)	452
PfeI	GAWTC	1 cut(s)	1496
PkrI	GCNGC	8 cut(s)	30, 531, 846, 918, 1029, 1169, 1360, 1372
Ple19I	CGATCG	1 cut(s)	513
PleI	GAGTC	3 cut(s)	1009, 1330, 1565
PpsI	GAGTC	3 cut(s)	1009, 1330, 1565
PshAI	GACNNNNGTC	1 cut(s)	815
PshBI	ATTAAT	1 cut(s)	1568
PspEI	GGTNACC	2 cut(s)	325, 716
PspN4I	GGNNCC	3 cut(s)	575, 624, 1234
PspPI	GGNCC	1 cut(s)	731
PspXI	VCTCGAGB	1 cut(s)	1352
PsuI	RGATCY	1 cut(s)	622
PvuI	CGATCG	1 cut(s)	513
RgaI	GCGATCGC	1 cut(s)	513
RsaI	GTAC	2 cut(s)	235, 431
RsaNI	GTAC	2 cut(s)	234, 430
SacII	CCGCGG	1 cut(s)	816
SapI	GCTCTTC	1 cut(s)	365
SaqAI	TTAA	6 cut(s)	279, 519, 546, 648, 779, 1568
SatI	GCNGC	8 cut(s)	29, 530, 845, 917, 1028, 1168, 1359, 1371
Sau3AI	GATC	9 cut(s)	510, 622, 652, 759, 799, 904, 964, 1077, 1111
Sau96I	GGNCC	1 cut(s)	731
SchI	GAGTC	3 cut(s)	1009, 1331, 1566
ScrFI	CCNGG	2 cut(s)	738, 913
SduI	GDGCHC	1 cut(s)	566
SfaAI	GCGATCGC	1 cut(s)	513
SfaNI	GCATC	4 cut(s)	398, 601, 1284, 1306
Sfr274I	CTCGAG	1 cut(s)	1352
Sfr303I	CCGCGG	1 cut(s)	816
SgfI	GCGATCGC	1 cut(s)	513
SgrBI	CCGCGG	1 cut(s)	816
SlaI	CTCGAG	1 cut(s)	1352
SmlI	CTYRAG	2 cut(s)	263, 1352
SmoI	CTYRAG	2 cut(s)	263, 1352
SspMI	CTAG	3 cut(s)	803, 1005, 1194
StyD4I	CCNGG	2 cut(s)	736, 911
TaaI	ACNGT	3 cut(s)	122, 639, 1158
TaiI	ACGT	2 cut(s)	443, 465
TaqI	TCGA	9 cut(s)	168, 245, 339, 641, 773, 1041, 1110, 1353, 1545
TaqII	GACCGA	1 cut(s)	1274
TatI	WGTACW	1 cut(s)	429
TauI	GCSGC	1 cut(s)	1373
TfiI	GAWTC	1 cut(s)	1496
Tru1I	TTAA	6 cut(s)	279, 519, 546, 648, 779, 1568
Tru9I	TTAA	6 cut(s)	279, 519, 546, 648, 779, 1568
TseFI	GTSAC	3 cut(s)	325, 1012, 1558
TseI	GCWGC	7 cut(s)	28, 529, 844, 916, 1027, 1167, 1358
Tsp45I	GTSAC	3 cut(s)	325, 1012, 1558
TspDTI	ATGAA	3 cut(s)	797, 972, 1509
VspI	ATTAAT	1 cut(s)	1568
XapI	RAATTY	3 cut(s)	969, 1033, 1288
XbaI	TCTAGA	1 cut(s)	802
XhoI	CTCGAG	1 cut(s)	1352
XmiI	GTMKAC	2 cut(s)	144, 207
XspI	CTAG	3 cut(s)	803, 1005, 1194

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.