Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

2747651 .. 2749141

Gene Structure 1491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g04040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1491 bp

ATGATGGGAGAAATGTGGGCTCAAACGGGCTCGGTGATTGCGAGTGTGATGTTTGTTGCTGCCATATTCCAACAGTACCTTCCTCCCCAACTTCGGTACCATGTCGAAAGATACACTAAAAAATTAGTGAGCTTTGTCTACCCTTACATCCAAATCTCCTTTGATGAATTCACCAATGATTTTCGCAAGCGAAGTGAAATCTATTCCGCCATCCAGAGCTACCTCAGCGCGAAGTCTTCCACCGGGGCTAAGCGGTTAAAAGCTCATGATGTCAAGGACAGCAAGTCTGTAGTCCTTGGCATGGATGACAATGAAGAAGTGACTGATGAATTTCAAGGCATTAATCTTTCATGGGCTTCGATGAAACGAACGAAGAATCAGACTTCATTTTCTTTCTATCCTCAGGCTGATGAGAAGAAACATTATACGCTGACGTTCCACAGACGCCATCGAGATATCATCACGGGGTCTTACCTTGATTATGTGATAAAAGAAGGGAAGGCGATATTGGTGAGCAACAGGCAACGAAAGCTCTATATCAACAATCCTACACAGAATTGGTACTCCTACAAGGGGACAAAGTGGAGCCATGTAGTGTTTGAGCACCCGGCATCATTTGAAACCCTAGCAATGGACCCCAAAAAGAAGGAAGAAATCGTCAATGACCTCATCAAGTTCAGAAAGGGAAAGGAGTACTATGAGAAAATCGGGAAGCCATGGAAGCGGGGTTATCTACTTTACGGGCCACCAGGCACTGGAAAGTCTACCATGATTGCTGCCATGTCTAATTTCATGGATTATGATGTCTATGATCTTGAGTTAACGACGGTGAAGGACAACACTGAGCTGAGGAAGCTACTGATTGACACGCCGAGTAAGTCTATACTTGTGATTGAGGACATTGATTGCTCGCTTGATCTTACAGGACAGCGAAAGAAGAAGAAGAACAAGGATGAGGAGGACAAAGAAGAAAAGGATCCAGTTCAAAAAAAGAAGGAAGATGAAGAAAACACACCGAGCAAGGTGACTCTTTCGGGGCTGCTAAACTTTATCGATGGGATTTGGTCAGCTTGCGGAGGGGAGAGACTGATCGTGTTCACTACTAATTATGTGGACAAACTTGATCCTGCGCTCATTAGAAGAGGAAGGATGGACAAACACATAGAATTGTCCTACTGCTGCTTCGAAGCATTCAAAGTGCTTGCTAGGAATTATTTGGATTTGGATTCACACGAGCTGTTTGAAACGATTGCGCGTTTGTTGGGCGAAACCAATATGACTCCTGCTGATGTCGCTGAGAACTTGATGCCTAAGTCTGTTATACAGGATGCTGAATCTTTTGAAGAGCTTGATCGAAGCTCTCGAGGCTGCGAAGGAGGAGGCAAGAATGAAGGCCGAGGAAGAAGCGAAATCAAAGGCAGAGGAAGCGGCAAAACTGTGATAGGTTGTATTATGTGCTTAGTGTGTAAATTAGAATGGTTAGGATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

497

Amino Acids

56.94

Weight (kDa)

8.18

Isoelectric Point (pI)

31.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	27 - 121	1.7e-25	Domain associated at C-terminal with AAA
AAA	PF00004	244 - 391	3.1e-16	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	393 - 446	4.2e-26	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	96
AccB1I	GGYRCC	1 cut(s)	96
AccB7I	CCANNNNNTGG	1 cut(s)	755
AccI	GTMKAC	2 cut(s)	138, 764
AccII	CGCG	2 cut(s)	230, 1255
AciI	CCGC	5 cut(s)	207, 253, 724, 1074, 1428
AclWI	GGATC	3 cut(s)	971, 984, 1118
AcsI	RAATTY	2 cut(s)	167, 329
AcyI	GRCGYC	1 cut(s)	445
AfaI	GTAC	4 cut(s)	77, 98, 563, 695
AfiI	CCNNNNNNNGG	5 cut(s)	93, 301, 573, 631, 755
AgsI	TTSAA	6 cut(s)	335, 620, 986, 1195, 1244, 1343
AhdI	GACNNNNNGTC	1 cut(s)	283
AjnI	CCWGG	1 cut(s)	748
AjuI	GAANNNNNNNTTGG	4 cut(s)	63, 95, 491, 523
Alw21I	GWGCWC	1 cut(s)	606
Alw26I	GTCTC	1 cut(s)	1078
AlwI	GGATC	3 cut(s)	971, 984, 1118
AlwNI	CAGNNNCTG	1 cut(s)	755
Ama87I	CYCGRG	1 cut(s)	1362
AoxI	GGCC	2 cut(s)	743, 1393
ApeKI	GCWGC	5 cut(s)	59, 776, 1039, 1179, 1368
ApoI	RAATTY	2 cut(s)	167, 329
AseI	ATTAAT	1 cut(s)	342
Asp718I	GGTACC	1 cut(s)	96
AspLEI	GCGC	3 cut(s)	230, 1132, 1255
AspS9I	GGNCC	2 cut(s)	634, 743
AsuC2I	CCSGG	2 cut(s)	244, 608
AsuHPI	GGTGA	5 cut(s)	46, 163, 523, 841, 1036
AsuII	TTCGAA	1 cut(s)	1185
AvaI	CYCGRG	1 cut(s)	1362
AvaII	GGWCC	1 cut(s)	634
AxyI	CCTNAGG	1 cut(s)	402
BaeI	ACNNNNGTAYC	2 cut(s)	80, 113
BamHI	GGATCC	1 cut(s)	976
BanI	GGYRCC	1 cut(s)	96
BanII	GRGCYC	2 cut(s)	22, 32
BauI	CACGAG	1 cut(s)	1232
BbsI	GAAGAC	1 cut(s)	228
Bbv12I	GWGCWC	1 cut(s)	606
BbvCI	CCTCAGC	2 cut(s)	224, 848
BbvI	GCAGC	5 cut(s)	46, 763, 1026, 1166, 1355
BccI	CCATC	4 cut(s)	218, 456, 1049, 1144
BciT130I	CCWGG	1 cut(s)	750
BcnI	CCSGG	2 cut(s)	244, 608
BcoDI	GTCTC	1 cut(s)	1078
BfaI	CTAG	2 cut(s)	626, 1206
BfmI	CTRYAG	1 cut(s)	288
BisI	GCNGC	6 cut(s)	60, 777, 1040, 1180, 1369, 1429
BlpI	GCTNAGC	1 cut(s)	249
BlsI	GCNGC	6 cut(s)	61, 778, 1041, 1181, 1370, 1430
BmcAI	AGTACT	1 cut(s)	695
Bme1390I	CCNGG	3 cut(s)	244, 608, 750
Bme18I	GGWCC	1 cut(s)	634
BmeRI	GACNNNNNGTC	1 cut(s)	283
BmeT110I	CYCGRG	1 cut(s)	1362
BmgT120I	GGNCC	2 cut(s)	634, 743
BmiI	GGNNCC	4 cut(s)	98, 587, 636, 978
BmrFI	CCNGG	3 cut(s)	244, 608, 750
BmsI	GCATC	3 cut(s)	620, 1296, 1318
BpiI	GAAGAC	1 cut(s)	228
Bpu10I	CCTNAGC	2 cut(s)	224, 848
Bpu1102I	GCTNAGC	1 cut(s)	249
Bpu14I	TTCGAA	1 cut(s)	1185
BpuEI	CTTGAG	1 cut(s)	836
BpuMI	CCSGG	2 cut(s)	244, 608
Bsa29I	ATCGAT	1 cut(s)	1053
BsaHI	GRCGYC	1 cut(s)	445
BsaJI	CCNNGG	4 cut(s)	243, 295, 716, 1396
Bsc4I	CCNNNNNNNGG	5 cut(s)	93, 301, 573, 631, 755
Bse1I	ACTGG	2 cut(s)	760, 980
Bse21I	CCTNAGG	1 cut(s)	402
Bse3DI	GCAATG	1 cut(s)	636
BseBI	CCWGG	1 cut(s)	750
BseCI	ATCGAT	1 cut(s)	1053
BseDI	CCNNGG	4 cut(s)	243, 295, 716, 1396
BseGI	GGATG	6 cut(s)	147, 210, 310, 958, 1155, 1333
BseLI	CCNNNNNNNGG	5 cut(s)	93, 301, 573, 631, 755
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	5 cut(s)	238, 416, 834, 839, 1287
BseNI	ACTGG	2 cut(s)	760, 980
BseRI	GAGGAG	2 cut(s)	971, 1392
BseXI	GCAGC	5 cut(s)	46, 763, 1026, 1166, 1355
Bsh1236I	CGCG	2 cut(s)	230, 1255
BshFI	GGCC	2 cut(s)	745, 1395
BshNI	GGYRCC	1 cut(s)	96
BshVI	ATCGAT	1 cut(s)	1053
BsiHKAI	GWGCWC	1 cut(s)	606
BsiHKCI	CYCGRG	1 cut(s)	1362
BsiSI	CCGG	2 cut(s)	243, 608
BslFI	GGGAC	1 cut(s)	589
BslI	CCNNNNNNNGG	5 cut(s)	93, 301, 573, 631, 755
BsmAI	GTCTC	1 cut(s)	1078
BsmFI	GGGAC	1 cut(s)	589
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	2 cut(s)	745, 1395
BsoBI	CYCGRG	1 cut(s)	1362
Bsp119I	TTCGAA	1 cut(s)	1185
Bsp1286I	GDGCHC	3 cut(s)	22, 32, 606
Bsp143I	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
Bsp1720I	GCTNAGC	1 cut(s)	249
Bsp19I	CCATGG	1 cut(s)	716
BspACI	CCGC	5 cut(s)	207, 253, 724, 1074, 1428
BspANI	GGCC	2 cut(s)	745, 1395
BspCNI	CTCAG	5 cut(s)	237, 415, 835, 840, 1288
BspDI	ATCGAT	1 cut(s)	1053
BspFNI	CGCG	2 cut(s)	230, 1255
BspHI	TCATGA	1 cut(s)	265
BspLI	GGNNCC	4 cut(s)	98, 587, 636, 978
BspPI	GGATC	3 cut(s)	971, 984, 1118
BspQI	GCTCTTC	1 cut(s)	1338
BspT104I	TTCGAA	1 cut(s)	1185
BspT107I	GGYRCC	1 cut(s)	96
BsrDI	GCAATG	1 cut(s)	636
BsrI	ACTGG	2 cut(s)	760, 980
BssECI	CCNNGG	4 cut(s)	243, 295, 716, 1396
BssMI	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
BssNI	GRCGYC	1 cut(s)	445
BssSI	CACGAG	1 cut(s)	1232
BssT1I	CCWWGG	2 cut(s)	295, 716
Bst2BI	CACGAG	1 cut(s)	1232
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	3 cut(s)	75, 829, 1438
Bst6I	CTCTTC	2 cut(s)	1135, 1338
BstACI	GRCGYC	1 cut(s)	445
BstBI	TTCGAA	1 cut(s)	1185
BstC8I	GCNNGC	4 cut(s)	188, 911, 1072, 1203
BstDEI	CTNAG	8 cut(s)	224, 249, 402, 843, 848, 1296, 1311, 1459
BstDSI	CCRYGG	1 cut(s)	716
BstF5I	GGATG	6 cut(s)	147, 210, 310, 958, 1155, 1333
BstFNI	CGCG	2 cut(s)	230, 1255
BstHHI	GCGC	3 cut(s)	230, 1132, 1255
BstKTI	GATC	6 cut(s)	814, 919, 979, 1092, 1126, 1354
BstMAI	GTCTC	1 cut(s)	1078
BstMBI	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
BstMWI	GCNNNNNNNGC	7 cut(s)	225, 529, 721, 853, 1292, 1365, 1425
BstNI	CCWGG	1 cut(s)	750
BstSCI	CCNGG	3 cut(s)	242, 606, 748
BstSFI	CTRYAG	1 cut(s)	288
BstUI	CGCG	2 cut(s)	230, 1255
BstV1I	GCAGC	5 cut(s)	46, 763, 1026, 1166, 1355
BstV2I	GAAGAC	1 cut(s)	228
BstX2I	RGATCY	1 cut(s)	976
BstYI	RGATCY	1 cut(s)	976
Bsu15I	ATCGAT	1 cut(s)	1053
Bsu36I	CCTNAGG	1 cut(s)	402
BsuRI	GGCC	2 cut(s)	745, 1395
BsuTUI	ATCGAT	1 cut(s)	1053
BtgI	CCRYGG	1 cut(s)	716
BtsCI	GGATG	6 cut(s)	147, 210, 310, 958, 1155, 1333
BtsIMutI	CAGTG	2 cut(s)	753, 840
Cac8I	GCNNGC	4 cut(s)	188, 911, 1072, 1203
CaiI	CAGNNNCTG	1 cut(s)	755
CciI	TCATGA	1 cut(s)	265
CfoI	GCGC	3 cut(s)	230, 1132, 1255
Cfr13I	GGNCC	2 cut(s)	634, 743
ClaI	ATCGAT	1 cut(s)	1053
CseI	GACGC	1 cut(s)	453
Csp6I	GTAC	4 cut(s)	76, 97, 562, 694
CviAII	CATG	9 cut(s)	101, 266, 301, 351, 590, 717, 769, 781, 793
CviQI	GTAC	4 cut(s)	76, 97, 562, 694
DdeI	CTNAG	8 cut(s)	224, 249, 402, 843, 848, 1296, 1311, 1459
DpnI	GATC	6 cut(s)	813, 918, 978, 1091, 1125, 1353
DpnII	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
DriI	GACNNNNNGTC	1 cut(s)	283
Eam1104I	CTCTTC	2 cut(s)	1135, 1338
Eam1105I	GACNNNNNGTC	1 cut(s)	283
EarI	CTCTTC	2 cut(s)	1135, 1338
EciI	GGCGGA	1 cut(s)	196
Eco130I	CCWWGG	2 cut(s)	295, 716
Eco24I	GRGCYC	2 cut(s)	22, 32
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	1 cut(s)	634
Eco81I	CCTNAGG	1 cut(s)	402
Eco88I	CYCGRG	1 cut(s)	1362
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	1 cut(s)	748
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	2 cut(s)	295, 716
EcoT38I	GRGCYC	2 cut(s)	22, 32
ErhI	CCWWGG	2 cut(s)	295, 716
FaeI	CATG	9 cut(s)	104, 269, 304, 354, 593, 720, 772, 784, 796
FaqI	GGGAC	1 cut(s)	589
FatI	CATG	9 cut(s)	100, 265, 300, 350, 589, 716, 768, 780, 792
FauI	CCCGC	1 cut(s)	717
FblI	GTMKAC	2 cut(s)	138, 764
Fnu4HI	GCNGC	6 cut(s)	60, 777, 1040, 1180, 1369, 1429
FokI	GGATG	6 cut(s)	134, 197, 317, 965, 1162, 1340
FriOI	GRGCYC	2 cut(s)	22, 32
Fsp4HI	GCNGC	6 cut(s)	60, 777, 1040, 1180, 1369, 1429
FspBI	CTAG	2 cut(s)	626, 1206
GlaI	GCGC	3 cut(s)	229, 1131, 1254
GluI	GCNGC	6 cut(s)	60, 777, 1040, 1180, 1369, 1429
HaeIII	GGCC	2 cut(s)	745, 1395
HapII	CCGG	2 cut(s)	243, 608
HgaI	GACGC	1 cut(s)	453
HhaI	GCGC	3 cut(s)	230, 1132, 1255
Hin1I	GRCGYC	1 cut(s)	445
Hin1II	CATG	9 cut(s)	104, 269, 304, 354, 593, 720, 772, 784, 796
Hin6I	GCGC	3 cut(s)	228, 1130, 1253
HinP1I	GCGC	3 cut(s)	228, 1130, 1253
HincII	GTYRAC	1 cut(s)	822
HindII	GTYRAC	1 cut(s)	822
HinfI	GANTC	5 cut(s)	376, 1027, 1226, 1279, 1334
HpaI	GTTAAC	1 cut(s)	822
HpaII	CCGG	2 cut(s)	243, 608
HphI	GGTGA	5 cut(s)	46, 163, 523, 841, 1036
Hpy166II	GTNNAC	5 cut(s)	139, 765, 822, 1098, 1114
Hpy188I	TCNGA	2 cut(s)	381, 680
Hpy188III	TCNNGA	6 cut(s)	214, 266, 452, 709, 815, 1362
Hpy8I	GTNNAC	5 cut(s)	139, 765, 822, 1098, 1114
Hpy99I	CGWCG	1 cut(s)	829
HpyAV	CCTTC	9 cut(s)	89, 488, 493, 640, 826, 988, 1140, 1367, 1385
HpyCH4III	ACNGT	3 cut(s)	75, 829, 1438
HpyCH4IV	ACGT	1 cut(s)	434
HpyF10VI	GCNNNNNNNGC	7 cut(s)	225, 529, 721, 853, 1292, 1365, 1425
HpyF3I	CTNAG	8 cut(s)	224, 249, 402, 843, 848, 1296, 1311, 1459
HpySE526I	ACGT	1 cut(s)	434
Hsp92I	GRCGYC	1 cut(s)	445
Hsp92II	CATG	9 cut(s)	104, 269, 304, 354, 593, 720, 772, 784, 796
HspAI	GCGC	3 cut(s)	228, 1130, 1253
KpnI	GGTACC	1 cut(s)	100
KspAI	GTTAAC	1 cut(s)	822
Kzo9I	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
LguI	GCTCTTC	1 cut(s)	1338
LmnI	GCTCC	1 cut(s)	585
Lsp1109I	GCAGC	5 cut(s)	46, 763, 1026, 1166, 1355
LweI	GCATC	3 cut(s)	620, 1296, 1318
MaeI	CTAG	2 cut(s)	626, 1206
MaeII	ACGT	1 cut(s)	434
MaeIII	GTNAC	2 cut(s)	319, 1024
MalI	GATC	6 cut(s)	813, 918, 978, 1091, 1125, 1353
MboI	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	3 cut(s)	22, 32, 606
MluCI	AATT	9 cut(s)	122, 167, 329, 556, 787, 1105, 1166, 1210, 1469
MlyI	GAGTC	2 cut(s)	1021, 1273
MmeI	TCCRAC	1 cut(s)	94
MseI	TTAA	3 cut(s)	257, 342, 821
MspI	CCGG	2 cut(s)	243, 608
MspR9I	CCNGG	3 cut(s)	244, 608, 750
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	2 cut(s)	230, 1255
MwoI	GCNNNNNNNGC	7 cut(s)	225, 529, 721, 853, 1292, 1365, 1425
NciI	CCSGG	2 cut(s)	244, 608
NcoI	CCATGG	1 cut(s)	716
NdeII	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
NlaIII	CATG	9 cut(s)	104, 269, 304, 354, 593, 720, 772, 784, 796
NlaIV	GGNNCC	4 cut(s)	98, 587, 636, 978
NmeAIII	GCCGAG	2 cut(s)	897, 1421
NmuCI	GTSAC	2 cut(s)	319, 1024
NspV	TTCGAA	1 cut(s)	1185
PaeR7I	CTCGAG	1 cut(s)	1362
PagI	TCATGA	1 cut(s)	265
PciSI	GCTCTTC	1 cut(s)	1338
PcsI	WCGNNNNNNNCGW	2 cut(s)	38, 1360
PctI	GAATGC	1 cut(s)	1190
PfeI	GAWTC	3 cut(s)	376, 1226, 1334
PflMI	CCANNNNNTGG	1 cut(s)	755
PkrI	GCNGC	6 cut(s)	61, 778, 1041, 1181, 1370, 1430
PleI	GAGTC	2 cut(s)	1021, 1273
PpsI	GAGTC	2 cut(s)	1021, 1273
PshBI	ATTAAT	1 cut(s)	342
Psp6I	CCWGG	1 cut(s)	748
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	4 cut(s)	98, 587, 636, 978
PspPI	GGNCC	2 cut(s)	634, 743
PstNI	CAGNNNCTG	1 cut(s)	755
PsuI	RGATCY	1 cut(s)	976
RsaI	GTAC	4 cut(s)	77, 98, 563, 695
RsaNI	GTAC	4 cut(s)	76, 97, 562, 694
SapI	GCTCTTC	1 cut(s)	1338
SaqAI	TTAA	3 cut(s)	257, 342, 821
SatI	GCNGC	6 cut(s)	60, 777, 1040, 1180, 1369, 1429
Sau3AI	GATC	6 cut(s)	811, 916, 976, 1089, 1123, 1351
Sau96I	GGNCC	2 cut(s)	634, 743
ScaI	AGTACT	1 cut(s)	695
SchI	GAGTC	2 cut(s)	1021, 1273
ScrFI	CCNGG	3 cut(s)	244, 608, 750
SduI	GDGCHC	3 cut(s)	22, 32, 606
SfaNI	GCATC	3 cut(s)	620, 1296, 1318
SfcI	CTRYAG	1 cut(s)	288
Sfr274I	CTCGAG	1 cut(s)	1362
SfuI	TTCGAA	1 cut(s)	1185
SinI	GGWCC	1 cut(s)	634
SlaI	CTCGAG	1 cut(s)	1362
SmlI	CTYRAG	2 cut(s)	815, 1362
SmoI	CTYRAG	2 cut(s)	815, 1362
Sse9I	AATT	9 cut(s)	122, 167, 329, 556, 787, 1105, 1166, 1210, 1469
SsiI	CCGC	5 cut(s)	207, 253, 724, 1074, 1428
SspMI	CTAG	2 cut(s)	626, 1206
StyD4I	CCNGG	3 cut(s)	242, 606, 748
StyI	CCWWGG	2 cut(s)	295, 716
TaaI	ACNGT	3 cut(s)	75, 829, 1438
TaiI	ACGT	1 cut(s)	437
TaqI	TCGA	7 cut(s)	105, 359, 451, 1053, 1185, 1354, 1363
TasI	AATT	9 cut(s)	122, 167, 329, 556, 787, 1105, 1166, 1210, 1469
TatI	WGTACW	1 cut(s)	693
TauI	GCSGC	1 cut(s)	1431
TfiI	GAWTC	3 cut(s)	376, 1226, 1334
Tru1I	TTAA	3 cut(s)	257, 342, 821
Tru9I	TTAA	3 cut(s)	257, 342, 821
TscAI	CASTG	2 cut(s)	760, 847
TseFI	GTSAC	2 cut(s)	319, 1024
TseI	GCWGC	5 cut(s)	59, 776, 1039, 1179, 1368
Tsp45I	GTSAC	2 cut(s)	319, 1024
TspDTI	ATGAA	9 cut(s)	180, 327, 339, 342, 375, 377, 781, 1017, 1404
TspRI	CASTG	2 cut(s)	760, 847
Van91I	CCANNNNNTGG	1 cut(s)	755
VpaK11BI	GGWCC	1 cut(s)	634
VspI	ATTAAT	1 cut(s)	342
XapI	RAATTY	2 cut(s)	167, 329
XhoI	CTCGAG	1 cut(s)	1362
XmiI	GTMKAC	2 cut(s)	138, 764
XspI	CTAG	2 cut(s)	626, 1206
ZrmI	AGTACT	1 cut(s)	695

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.