Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

77425456 .. 77434364

Gene Structure 8909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG599000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGATCAGTCCAGCAGAGATATTCGCTCGTCTAGGATCTGATATTGGTCCTTTGATGTTCGTGGGTTCGATCATATCGCACTACCTTCCTCATGAACTTGGAAGCTACATCAATACATACTTTCAAAGACTGGTGCTTTTCGCCACACCTTGCATCCAAATCACATTCAATGAATTAGCAGGAGAGCGTCCCACGCGCAATGAAGCCTATTCTGCTGTGGAGAACTATCTGAGCATAATGTACTCAAAGGAAGCAAAGAGGCTGAAGGCTGATATCAAGAACAACTCCCTTGTTCTGAGCATGGATGAGTATGAAGTGGCCGCAGATGAGTTTGAAGGAGCCAAAGTGTGGTGGGTTTCTGGAAAGAGTTGTTCCAAGACAGACAGAAATTCTTCTTACTACAAGCTCTTCTTCCATAAAAGGCACAGGGATCCCATCATCAAGCGATACCTCACCCATGTCTTAAAGGAAGAACCAAATTTGAAAAACCCCCGAAGAAAGCTTTATAGCAACATGGGGCCACACTGGAGCCATGTAGTGTTTCAGAACCCGGCAACATTTCAGACACTAGCCATGGAGCCAGAGAAGAAGAAGGAAATCATCCTTGACCTAAATGTATTCAGCACAGCAGGAGGGTTTTATGCAAGAATTGGGAGGGCATGGAAGCGAGGCTATCTCCTTTTTGGCCCTCCAGGGACTGGCAAGTCCACATTAATTGCTGCCATGGCCAATCATTTAGGCTATGACACTTATGATCTTGACTTGACTGCAGTGGAGGACAACACTGAGCTGAGGAAGCTATTGATCGAAACATCAAGTAAGTCCATAATTGTAATAGAGGACATTGATCGTGCGCTTGATTTCTCAGGCCAAATGAGGAAGAGAATAGCTAATGGGGAAGAGGAGGAAATGGGAAGGCTTGGGATACAAGAAAGAGAAACCAAACCCTATCAGGTTACTATTTCTGGCATTCTAAACTTCATTGATGGTCTGGGGTCATCTTGTTGCGGAGAAAGGCTCATTGTCTTCACAACTAATCATGTGGAGAAACTCGATGCAGCACTGATTCGGAAAGGAAGGATGGATAAGCACATAGAATTATCGTACTGCCGGTTTGAAGCATTCAAGGTGCTGGCCAAAAACTACCTTGAAATCGAAGCACACCCGTTGTTTCCCACCATTTGCAGCTTGCTTGGGAAAACCAATACGACTCCAGCTGATGTAGCAGAGCATTTGACACCCAAGACCATTTCGGGTGATGTTGAAACCTGCCTGGAAAATGCGGAAATCTGCCTGCAGAATCTGATCAAAGCTCTTGAAAAAGAAGAAGAGAATGTTCGAGATTCTAGGGTTTCGGTGACCGTCGTTCGAGCCAGCCTCGACGCAGTCACCGGGATTAGGCCTGGCGGAGCTATCGAGAGCGATAAGCTACAGTCCGATGTGAGGAAGCGCACCATGGACGTTGTCGATGCCTGCGGAGGGAGAGTGACGATTGGTGACGTCTCTAGCAGAGCTGGGCTCAAGCTCAATGGGGGCTCAGAACGCTTTGCAGGCTCTCGCTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

521

Amino Acids

58.37

Weight (kDa)

7.17

Isoelectric Point (pI)

35.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	29 - 120	4.3e-20	Domain associated at C-terminal with AAA
AAA	PF00004	225 - 368	2.8e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	370 - 444	1.3e-25	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	703
AatII	GACGTC	1 cut(s)	1503
Acc36I	ACCTGC	1 cut(s)	1277
AccB7I	CCANNNNNTGG	2 cut(s)	348, 698
AccII	CGCG	1 cut(s)	196
AciI	CCGC	5 cut(s)	321, 1008, 1283, 1407, 1476
AclWI	GGATC	3 cut(s)	43, 425, 438
AcoI	YGGCCR	3 cut(s)	318, 726, 1134
AcsI	RAATTY	2 cut(s)	388, 478
AcuI	CTGAAG	1 cut(s)	284
AcyI	GRCGYC	1 cut(s)	1500
AfaI	GTAC	2 cut(s)	242, 1106
AfiI	CCNNNNNNNGG	5 cut(s)	348, 698, 1398, 1443, 1479
AgsI	TTSAA	9 cut(s)	125, 169, 335, 484, 1118, 1126, 1151, 1265, 1319
AjnI	CCWGG	3 cut(s)	691, 1272, 1402
Alw26I	GTCTC	1 cut(s)	1507
AlwI	GGATC	3 cut(s)	43, 425, 438
AlwNI	CAGNNNCTG	2 cut(s)	698, 1303
AoxI	GGCC	7 cut(s)	318, 518, 685, 726, 868, 1134, 1400
ApeKI	GCWGC	4 cut(s)	719, 1058, 1185, 1560
ApoI	RAATTY	2 cut(s)	388, 478
AseI	ATTAAT	1 cut(s)	713
Asp700I	GAANNNNTTC	1 cut(s)	391
AspLEI	GCGC	3 cut(s)	198, 856, 1452
AspS9I	GGNCC	3 cut(s)	47, 518, 686
AsuC2I	CCSGG	2 cut(s)	551, 1393
AsuHPI	GGTGA	5 cut(s)	445, 1268, 1369, 1381, 1508
AvaII	GGWCC	1 cut(s)	47
BalI	TGGCCA	2 cut(s)	728, 1136
BamHI	GGATCC	1 cut(s)	430
BanII	GRGCYC	2 cut(s)	1521, 1538
BbsI	GAAGAC	1 cut(s)	1018
BbvCI	CCTCAGC	1 cut(s)	791
BbvI	GCAGC	4 cut(s)	706, 1070, 1197, 1547
BccI	CCATC	3 cut(s)	443, 980, 1075
BciT130I	CCWGG	3 cut(s)	693, 1274, 1404
BciVI	GTATCC	1 cut(s)	918
BclI	TGATCA	2 cut(s)	3, 1305
BcnI	CCSGG	2 cut(s)	551, 1393
BcoDI	GTCTC	1 cut(s)	1507
BfaI	CTAG	4 cut(s)	32, 569, 1347, 1506
BfmI	CTRYAG	3 cut(s)	768, 1295, 1430
BfuAI	ACCTGC	1 cut(s)	1277
BfuI	GTATCC	1 cut(s)	918
BisI	GCNGC	5 cut(s)	321, 720, 1059, 1186, 1561
BlsI	GCNGC	5 cut(s)	322, 721, 1060, 1187, 1562
Bme1390I	CCNGG	5 cut(s)	551, 693, 1274, 1393, 1404
Bme18I	GGWCC	1 cut(s)	47
BmgT120I	GGNCC	3 cut(s)	47, 518, 686
BmiI	GGNNCC	5 cut(s)	340, 432, 519, 530, 579
BmrFI	CCNGG	5 cut(s)	551, 693, 1274, 1393, 1404
BmsI	GCATC	3 cut(s)	162, 1045, 1459
BpiI	GAAGAC	1 cut(s)	1018
BplI	GAGNNNNNCTC	8 cut(s)	660, 692, 1002, 1034, 1362, 1394, 1503, 1535
BpmI	CTGGAG	3 cut(s)	547, 675, 1197
Bpu10I	CCTNAGC	1 cut(s)	791
BpuEI	CTTGAG	1 cut(s)	1505
BpuMI	CCSGG	2 cut(s)	551, 1393
BsaHI	GRCGYC	1 cut(s)	1500
BsaJI	CCNNGG	4 cut(s)	573, 692, 723, 1455
BsaXI	ACNNNNNCTCC	4 cut(s)	330, 360, 1470, 1500
Bsc4I	CCNNNNNNNGG	5 cut(s)	348, 698, 1398, 1443, 1479
Bse118I	RCCGGY	1 cut(s)	1110
Bse1I	ACTGG	3 cut(s)	135, 530, 703
Bse3DI	GCAATG	1 cut(s)	205
BseBI	CCWGG	3 cut(s)	693, 1274, 1404
BseDI	CCNNGG	4 cut(s)	573, 692, 723, 1455
BseGI	GGATG	4 cut(s)	153, 310, 600, 1086
BseLI	CCNNNNNNNGG	5 cut(s)	348, 698, 1398, 1443, 1479
BseMI	GCAATG	1 cut(s)	205
BseMII	CTCAG	6 cut(s)	221, 287, 777, 782, 879, 1551
BseNI	ACTGG	3 cut(s)	135, 530, 703
BseRI	GAGGAG	1 cut(s)	917
BseXI	GCAGC	4 cut(s)	706, 1070, 1197, 1547
BseYI	CCCAGC	1 cut(s)	1514
Bsh1236I	CGCG	1 cut(s)	196
BshFI	GGCC	7 cut(s)	320, 520, 687, 728, 870, 1136, 1402
BsiSI	CCGG	3 cut(s)	551, 1111, 1392
BslFI	GGGAC	2 cut(s)	174, 709
BslI	CCNNNNNNNGG	5 cut(s)	348, 698, 1398, 1443, 1479
BsmAI	GTCTC	1 cut(s)	1507
BsmBI	CGTCTC	1 cut(s)	1507
BsmFI	GGGAC	2 cut(s)	174, 709
BsmI	GAATGC	2 cut(s)	969, 1121
BsnI	GGCC	7 cut(s)	320, 520, 687, 728, 870, 1136, 1402
Bsp1286I	GDGCHC	2 cut(s)	1521, 1538
Bsp143I	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
Bsp19I	CCATGG	3 cut(s)	573, 723, 1455
BspACI	CCGC	5 cut(s)	321, 1008, 1283, 1407, 1476
BspANI	GGCC	7 cut(s)	320, 520, 687, 728, 870, 1136, 1402
BspCNI	CTCAG	6 cut(s)	222, 288, 778, 783, 878, 1550
BspFNI	CGCG	1 cut(s)	196
BspHI	TCATGA	1 cut(s)	91
BspLI	GGNNCC	5 cut(s)	340, 432, 519, 530, 579
BspMAI	CTGCAG	2 cut(s)	772, 1299
BspMI	ACCTGC	1 cut(s)	1277
BspPI	GGATC	3 cut(s)	43, 425, 438
BspQI	GCTCTTC	1 cut(s)	413
BsrDI	GCAATG	1 cut(s)	205
BsrFI	RCCGGY	1 cut(s)	1110
BsrI	ACTGG	3 cut(s)	135, 530, 703
BssAI	RCCGGY	1 cut(s)	1110
BssECI	CCNNGG	4 cut(s)	573, 692, 723, 1455
BssMI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
BssNI	GRCGYC	1 cut(s)	1500
BssT1I	CCWWGG	3 cut(s)	573, 723, 1455
Bst2UI	CCWGG	3 cut(s)	693, 1274, 1404
Bst4CI	ACNGT	2 cut(s)	1363, 1434
Bst6I	CTCTTC	4 cut(s)	413, 875, 894, 1323
BstACI	GRCGYC	1 cut(s)	1500
BstC8I	GCNNGC	6 cut(s)	1134, 1190, 1295, 1375, 1474, 1552
BstDEI	CTNAG	6 cut(s)	230, 296, 786, 791, 865, 1537
BstDSI	CCRYGG	3 cut(s)	573, 723, 1455
BstEII	GGTNACC	1 cut(s)	1357
BstF5I	GGATG	4 cut(s)	153, 310, 600, 1086
BstFNI	CGCG	1 cut(s)	196
BstHHI	GCGC	3 cut(s)	198, 856, 1452
BstKTI	GATC	8 cut(s)	6, 38, 72, 433, 757, 807, 850, 1308
BstMAI	GTCTC	1 cut(s)	1507
BstMBI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
BstMWI	GCNNNNNNNGC	8 cut(s)	193, 212, 725, 796, 1223, 1542, 1551, 1560
BstNI	CCWGG	3 cut(s)	693, 1274, 1404
BstPI	GGTNACC	1 cut(s)	1357
BstSCI	CCNGG	5 cut(s)	549, 691, 1272, 1391, 1402
BstSFI	CTRYAG	3 cut(s)	768, 1295, 1430
BstUI	CGCG	1 cut(s)	196
BstV1I	GCAGC	4 cut(s)	706, 1070, 1197, 1547
BstV2I	GAAGAC	1 cut(s)	1018
BstX2I	RGATCY	2 cut(s)	35, 430
BstYI	RGATCY	2 cut(s)	35, 430
BsuI	GTATCC	1 cut(s)	918
BsuRI	GGCC	7 cut(s)	320, 520, 687, 728, 870, 1136, 1402
BtgI	CCRYGG	3 cut(s)	573, 723, 1455
BtsCI	GGATG	4 cut(s)	153, 310, 600, 1086
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	4 cut(s)	523, 777, 783, 1061
BveI	ACCTGC	1 cut(s)	1277
Cac8I	GCNNGC	6 cut(s)	1134, 1190, 1295, 1375, 1474, 1552
CaiI	CAGNNNCTG	2 cut(s)	698, 1303
CciI	TCATGA	1 cut(s)	91
CfoI	GCGC	3 cut(s)	198, 856, 1452
Cfr10I	RCCGGY	1 cut(s)	1110
Cfr13I	GGNCC	3 cut(s)	47, 518, 686
CseI	GACGC	2 cut(s)	176, 1391
Csp6I	GTAC	2 cut(s)	241, 1105
CspCI	CAANNNNNGTGG	2 cut(s)	697, 732
CviQI	GTAC	2 cut(s)	241, 1105
DdeI	CTNAG	6 cut(s)	230, 296, 786, 791, 865, 1537
DpnI	GATC	8 cut(s)	5, 37, 71, 432, 756, 806, 849, 1307
DpnII	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
DrdI	GACNNNNNNGTC	1 cut(s)	703
DseDI	GACNNNNNNGTC	1 cut(s)	703
EaeI	YGGCCR	3 cut(s)	318, 726, 1134
Eam1104I	CTCTTC	4 cut(s)	413, 875, 894, 1323
EarI	CTCTTC	4 cut(s)	413, 875, 894, 1323
EciI	GGCGGA	1 cut(s)	1422
Eco130I	CCWWGG	3 cut(s)	573, 723, 1455
Eco147I	AGGCCT	1 cut(s)	1402
Eco24I	GRGCYC	2 cut(s)	1521, 1538
Eco32I	GATATC	1 cut(s)	274
Eco47I	GGWCC	1 cut(s)	47
Eco57I	CTGAAG	1 cut(s)	284
Eco91I	GGTNACC	1 cut(s)	1357
EcoO65I	GGTNACC	1 cut(s)	1357
EcoRII	CCWGG	3 cut(s)	691, 1272, 1402
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	3 cut(s)	573, 723, 1455
EcoT38I	GRGCYC	2 cut(s)	1521, 1538
ErhI	CCWWGG	3 cut(s)	573, 723, 1455
Esp3I	CGTCTC	1 cut(s)	1507
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	2 cut(s)	174, 709
FbaI	TGATCA	2 cut(s)	3, 1305
Fnu4HI	GCNGC	5 cut(s)	321, 720, 1059, 1186, 1561
FokI	GGATG	4 cut(s)	140, 317, 587, 1093
FriOI	GRGCYC	2 cut(s)	1521, 1538
Fsp4HI	GCNGC	5 cut(s)	321, 720, 1059, 1186, 1561
FspBI	CTAG	4 cut(s)	32, 569, 1347, 1506
GlaI	GCGC	3 cut(s)	197, 855, 1451
GluI	GCNGC	5 cut(s)	321, 720, 1059, 1186, 1561
GsaI	CCCAGC	1 cut(s)	1518
GsuI	CTGGAG	3 cut(s)	547, 675, 1197
HaeIII	GGCC	7 cut(s)	320, 520, 687, 728, 870, 1136, 1402
HapII	CCGG	3 cut(s)	551, 1111, 1392
HgaI	GACGC	2 cut(s)	176, 1391
HhaI	GCGC	3 cut(s)	198, 856, 1452
Hin1I	GRCGYC	1 cut(s)	1500
Hin6I	GCGC	3 cut(s)	196, 854, 1450
HinP1I	GCGC	3 cut(s)	196, 854, 1450
HindIII	AAGCTT	1 cut(s)	500
HinfI	GANTC	4 cut(s)	1066, 1210, 1300, 1343
HpaII	CCGG	3 cut(s)	551, 1111, 1392
HphI	GGTGA	5 cut(s)	445, 1268, 1369, 1381, 1508
Hpy166II	GTNNAC	1 cut(s)	708
Hpy188I	TCNGA	9 cut(s)	40, 231, 297, 546, 564, 1071, 1305, 1438, 1540
Hpy188III	TCNNGA	7 cut(s)	92, 277, 360, 758, 1316, 1340, 1417
Hpy8I	GTNNAC	1 cut(s)	708
Hpy99I	CGWCG	2 cut(s)	1367, 1385
HpyAV	CCTTC	6 cut(s)	95, 259, 329, 586, 909, 1071
HpyCH4III	ACNGT	2 cut(s)	1363, 1434
HpyCH4IV	ACGT	2 cut(s)	1461, 1500
HpyCH4V	TGCA	7 cut(s)	153, 644, 770, 1058, 1185, 1297, 1550
HpyF10VI	GCNNNNNNNGC	8 cut(s)	193, 212, 725, 796, 1223, 1542, 1551, 1560
HpyF3I	CTNAG	6 cut(s)	230, 296, 786, 791, 865, 1537
HpySE526I	ACGT	2 cut(s)	1461, 1500
Hsp92I	GRCGYC	1 cut(s)	1500
HspAI	GCGC	3 cut(s)	196, 854, 1450
Ksp22I	TGATCA	2 cut(s)	3, 1305
Kzo9I	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
LguI	GCTCTTC	1 cut(s)	413
LmnI	GCTCC	4 cut(s)	338, 528, 577, 1409
Lsp1109I	GCAGC	4 cut(s)	706, 1070, 1197, 1547
LweI	GCATC	3 cut(s)	162, 1045, 1459
MaeI	CTAG	4 cut(s)	32, 569, 1347, 1506
MaeII	ACGT	2 cut(s)	1461, 1500
MaeIII	GTNAC	5 cut(s)	955, 1357, 1387, 1486, 1496
MalI	GATC	8 cut(s)	5, 37, 71, 432, 756, 806, 849, 1307
MboI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
MflI	RGATCY	2 cut(s)	35, 430
MhlI	GDGCHC	2 cut(s)	1521, 1538
MlsI	TGGCCA	2 cut(s)	728, 1136
MluCI	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
MluNI	TGGCCA	2 cut(s)	728, 1136
MlyI	GAGTC	1 cut(s)	1204
Mox20I	TGGCCA	2 cut(s)	728, 1136
MroXI	GAANNNNTTC	1 cut(s)	391
MscI	TGGCCA	2 cut(s)	728, 1136
MseI	TTAA	2 cut(s)	464, 713
Msp20I	TGGCCA	2 cut(s)	728, 1136
MspA1I	CMGCKG	1 cut(s)	1217
MspI	CCGG	3 cut(s)	551, 1111, 1392
MspR9I	CCNGG	5 cut(s)	551, 693, 1274, 1393, 1404
Mva1269I	GAATGC	2 cut(s)	969, 1121
MvaI	CCWGG	3 cut(s)	693, 1274, 1404
MvnI	CGCG	1 cut(s)	196
MwoI	GCNNNNNNNGC	8 cut(s)	193, 212, 725, 796, 1223, 1542, 1551, 1560
NciI	CCSGG	2 cut(s)	551, 1393
NcoI	CCATGG	3 cut(s)	573, 723, 1455
NdeII	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
NlaIV	GGNNCC	5 cut(s)	340, 432, 519, 530, 579
NmuCI	GTSAC	4 cut(s)	1357, 1387, 1486, 1496
PagI	TCATGA	1 cut(s)	91
PceI	AGGCCT	1 cut(s)	1402
PciSI	GCTCTTC	1 cut(s)	413
PctI	GAATGC	2 cut(s)	969, 1121
PdmI	GAANNNNTTC	1 cut(s)	391
PfeI	GAWTC	3 cut(s)	1066, 1300, 1343
PflFI	GACNNNGTC	2 cut(s)	1385, 1463
PflMI	CCANNNNNTGG	2 cut(s)	348, 698
PkrI	GCNGC	5 cut(s)	322, 721, 1060, 1187, 1562
PleI	GAGTC	1 cut(s)	1204
PpsI	GAGTC	1 cut(s)	1204
PshBI	ATTAAT	1 cut(s)	713
Psp6I	CCWGG	3 cut(s)	691, 1272, 1402
PspEI	GGTNACC	1 cut(s)	1357
PspFI	CCCAGC	1 cut(s)	1514
PspGI	CCWGG	3 cut(s)	691, 1272, 1402
PspN4I	GGNNCC	5 cut(s)	340, 432, 519, 530, 579
PspPI	GGNCC	3 cut(s)	47, 518, 686
PstI	CTGCAG	2 cut(s)	772, 1299
PstNI	CAGNNNCTG	2 cut(s)	698, 1303
PsuI	RGATCY	2 cut(s)	35, 430
PsyI	GACNNNGTC	2 cut(s)	1385, 1463
PvuII	CAGCTG	1 cut(s)	1217
RsaI	GTAC	2 cut(s)	242, 1106
RsaNI	GTAC	2 cut(s)	241, 1105
SapI	GCTCTTC	1 cut(s)	413
SaqAI	TTAA	2 cut(s)	464, 713
SatI	GCNGC	5 cut(s)	321, 720, 1059, 1186, 1561
Sau3AI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
Sau96I	GGNCC	3 cut(s)	47, 518, 686
SchI	GAGTC	1 cut(s)	1204
ScrFI	CCNGG	5 cut(s)	551, 693, 1274, 1393, 1404
SduI	GDGCHC	2 cut(s)	1521, 1538
SfaNI	GCATC	3 cut(s)	162, 1045, 1459
SfcI	CTRYAG	3 cut(s)	768, 1295, 1430
SinI	GGWCC	1 cut(s)	47
SmlI	CTYRAG	1 cut(s)	1520
SmoI	CTYRAG	1 cut(s)	1520
Sse9I	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
SseBI	AGGCCT	1 cut(s)	1402
SsiI	CCGC	5 cut(s)	321, 1008, 1283, 1407, 1476
SspMI	CTAG	4 cut(s)	32, 569, 1347, 1506
StuI	AGGCCT	1 cut(s)	1402
StyD4I	CCNGG	5 cut(s)	549, 691, 1272, 1391, 1402
StyI	CCWWGG	3 cut(s)	573, 723, 1455
TaaI	ACNGT	2 cut(s)	1363, 1434
TaiI	ACGT	2 cut(s)	1464, 1503
TaqI	TCGA	9 cut(s)	68, 807, 1053, 1155, 1339, 1369, 1380, 1416, 1467
TasI	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
TatI	WGTACW	1 cut(s)	240
TauI	GCSGC	1 cut(s)	323
TfiI	GAWTC	3 cut(s)	1066, 1300, 1343
Tru1I	TTAA	2 cut(s)	464, 713
Tru9I	TTAA	2 cut(s)	464, 713
TscAI	CASTG	4 cut(s)	530, 777, 790, 1068
TseFI	GTSAC	4 cut(s)	1357, 1387, 1486, 1496
TseI	GCWGC	4 cut(s)	719, 1058, 1185, 1560
Tsp45I	GTSAC	4 cut(s)	1357, 1387, 1486, 1496
TspDTI	ATGAA	5 cut(s)	108, 186, 216, 327, 970
TspRI	CASTG	4 cut(s)	530, 777, 790, 1068
Tth111I	GACNNNGTC	2 cut(s)	1385, 1463
Van91I	CCANNNNNTGG	2 cut(s)	348, 698
VpaK11BI	GGWCC	1 cut(s)	47
VspI	ATTAAT	1 cut(s)	713
XapI	RAATTY	2 cut(s)	388, 478
XmnI	GAANNNNTTC	1 cut(s)	391
XspI	CTAG	4 cut(s)	32, 569, 1347, 1506
ZraI	GACGTC	1 cut(s)	1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.