Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Forward (+)

78842647 .. 78861655

Gene Structure 19009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G051180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1566 bp

ATGATCAGTCCAGCAGAGATATTCGCTCGTCTAGGATCTGATATTGGTCCTTTGATGTTCGTGGGTTCGATCATATCGCACTACCTTCCTCATGAACTTGGAAGCTACATCAATACATACTTTCAAAGACTGGTGCTTTTCGCCACACCTTGCATCCAAATCACATTCAATGAATTAGCAGGAGAGCGTCCCACGCGCAATGAAGCCTATTCTGCTGTGGAGAACTATCTGAGCATAATGTACTCAAAGGAAGCAAAGAGGCTGAAGGCTGATATCAAGAACAACTCCCTTGTTCTTAGCATGGATGAGTATGAAGTGGCTGCGGATGAGTTTGAAGGAGCCAAAGTATGGTGGGTTTCTGGAAAGAGTTGTTCCAAGACAGACACAAATTCTTCTTACTACAAGCTCTTCTTCCATAAAAGGCACCTGGATCTCATCATCAGGCGATACCTCACCCATGTCTTAAAGGAAGAACCAAATTTGAGAAACCCCCGAAGAAAGCTTTATAGCAACATGGGGTCACACTGGAGCCATGTAGTGTTTCAGAACCCGGCAACATTTCAGACACTAGCCATGGAGCCAGAGAAGAAGAAGGAAATCATCCTTGACCTAAATGTATTCAGCACAGCAGGAGGGTTTTATGCAAGAATTGGGAGGGCATGGAAGCGAGGCTATCTCCTTTTTGGCCCTCCAGGGACTGGCAAGTCCACATTAATTGCTGCCATGGCCAATCATTTAGGCTATGACACTTATGATCTTGACTTGACTGCAGTGGAGGACAACACTGAGCTGAGGAAGCTATTGATCGAAACATCAAGTAAGTCCATAATTGTAATAGAGGACATTGATCGTGCGCTTGATTTCTCAGGCCAAATGAGGAAGAGAATAGCTAATGGGGAAGAGGAGGAAATGGGAAGGCTTGGGATACAAGAAAGAGAAACCAAACCCTATCAGGTTACTATTTCTGGCATTCTAAACTTCATTGATGGTCTGGGGTCATCTTGTTGCGGAGAAAGGCTCATTGTCTTCACAACTAATCATGTGGAGAAACTCGATGCAGCACTGATTCGGAAAGGAAGGATGGATAAGCACATAGAATTATCGTACTGCCGGTTTGAAGCATTCAAGGTGCTGGCCAAAAACTACCTTGAAATCGAAGCACACCCGTTGTTTCCCACCATTTGCAGCTTGCTTGGGAAAACCAATACGACTCCAGCTGATGTAGCAGAGCATTTGACACCCAAGACCATTTCGGGTGATGTTGAAACCTGCCTGGAAAATGCGGAAATCTGCCTGCAGAATCTGATCAAAGCTCTTGAAAAAGAAGAAGAGAATGTAAGAAGAAGACCGAAGGAAAAGAAAGAAGAAAAAAAAAAAAAAAAGGGACCCGGCCCAAGAAAAAAGAAAAAGAAAAAAGGAGAGGGGACCCGGCCGGCCCAAAAAAAAAAAAAAGAGAGAAAGAAAAAAAAAGAAAAAAGAGAGGAAAGCCCAAAGAACAAAAAAAAACACGCCTGCTCCAACACGTGCGTGTCCTCAAGCCAAGAACAATCACGTAAGTTTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

521

Amino Acids

59.43

Weight (kDa)

9.33

Isoelectric Point (pI)

40.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	29 - 120	4.3e-20	Domain associated at C-terminal with AAA
AAA	PF00004	225 - 368	2.8e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	370 - 445	7.5e-25	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1564
AasI	GACNNNNNNGTC	1 cut(s)	703
Acc36I	ACCTGC	1 cut(s)	1277
AccB1I	GGYRCC	1 cut(s)	423
AccB7I	CCANNNNNTGG	2 cut(s)	348, 698
AccII	CGCG	1 cut(s)	196
AciI	CCGC	3 cut(s)	323, 1008, 1283
AclWI	GGATC	2 cut(s)	43, 438
AcoI	YGGCCR	3 cut(s)	726, 1134, 1430
AcsI	RAATTY	2 cut(s)	388, 478
AcuI	CTGAAG	1 cut(s)	284
AcvI	CACGTG	1 cut(s)	1524
AfaI	GTAC	2 cut(s)	242, 1106
AfiI	CCNNNNNNNGG	2 cut(s)	348, 698
AflIII	ACRYGT	1 cut(s)	1521
AgsI	TTSAA	8 cut(s)	125, 169, 335, 1118, 1126, 1151, 1265, 1319
AjnI	CCWGG	3 cut(s)	426, 691, 1272
AleI	CACNNNNGTG	1 cut(s)	1526
AluBI	AGCT	9 cut(s)	105, 406, 502, 790, 799, 890, 1188, 1217, 1313
AluI	AGCT	9 cut(s)	105, 406, 502, 790, 799, 890, 1188, 1217, 1313
AlwI	GGATC	2 cut(s)	43, 438
AlwNI	CAGNNNCTG	2 cut(s)	698, 1303
AoxI	GGCC	7 cut(s)	685, 726, 868, 1134, 1390, 1430, 1434
ApeKI	GCWGC	4 cut(s)	320, 719, 1058, 1185
ApoI	RAATTY	2 cut(s)	388, 478
AseI	ATTAAT	1 cut(s)	713
AspLEI	GCGC	2 cut(s)	198, 856
AspS9I	GGNCC	6 cut(s)	47, 686, 1385, 1391, 1425, 1435
AsuC2I	CCSGG	3 cut(s)	551, 1389, 1429
AsuHPI	GGTGA	2 cut(s)	445, 1268
AvaII	GGWCC	3 cut(s)	47, 1385, 1425
BalI	TGGCCA	2 cut(s)	728, 1136
BanI	GGYRCC	1 cut(s)	423
BbrPI	CACGTG	1 cut(s)	1524
BbsI	GAAGAC	2 cut(s)	1018, 1351
BbvCI	CCTCAGC	1 cut(s)	791
BbvI	GCAGC	4 cut(s)	307, 706, 1070, 1197
BccI	CCATC	2 cut(s)	980, 1075
BciT130I	CCWGG	3 cut(s)	428, 693, 1274
BciVI	GTATCC	1 cut(s)	918
BclI	TGATCA	2 cut(s)	3, 1305
BcnI	CCSGG	3 cut(s)	551, 1389, 1429
BfaI	CTAG	2 cut(s)	32, 569
BfmI	CTRYAG	2 cut(s)	768, 1295
BfuAI	ACCTGC	1 cut(s)	1277
BfuI	GTATCC	1 cut(s)	918
BisI	GCNGC	4 cut(s)	321, 720, 1059, 1186
BlsI	GCNGC	4 cut(s)	322, 721, 1060, 1187
Bme1390I	CCNGG	6 cut(s)	428, 551, 693, 1274, 1389, 1429
Bme18I	GGWCC	3 cut(s)	47, 1385, 1425
BmgT120I	GGNCC	6 cut(s)	47, 686, 1385, 1391, 1425, 1435
BmiI	GGNNCC	8 cut(s)	340, 425, 530, 579, 1386, 1387, 1426, 1427
BmrFI	CCNGG	6 cut(s)	428, 551, 693, 1274, 1389, 1429
BmsI	GCATC	2 cut(s)	162, 1045
BpiI	GAAGAC	2 cut(s)	1018, 1351
BplI	GAGNNNNNCTC	4 cut(s)	660, 692, 1002, 1034
BpmI	CTGGAG	3 cut(s)	547, 675, 1197
Bpu10I	CCTNAGC	1 cut(s)	791
BpuEI	CTTGAG	1 cut(s)	1519
BpuMI	CCSGG	3 cut(s)	551, 1389, 1429
BsaAI	YACGTR	2 cut(s)	1524, 1553
BsaJI	CCNNGG	3 cut(s)	573, 692, 723
BsaXI	ACNNNNNCTCC	4 cut(s)	330, 360, 1499, 1529
Bsc4I	CCNNNNNNNGG	2 cut(s)	348, 698
Bse118I	RCCGGY	2 cut(s)	1110, 1432
Bse1I	ACTGG	3 cut(s)	135, 530, 703
Bse3DI	GCAATG	1 cut(s)	205
BseBI	CCWGG	3 cut(s)	428, 693, 1274
BseDI	CCNNGG	3 cut(s)	573, 692, 723
BseGI	GGATG	5 cut(s)	153, 310, 331, 600, 1086
BseLI	CCNNNNNNNGG	2 cut(s)	348, 698
BseMI	GCAATG	1 cut(s)	205
BseMII	CTCAG	4 cut(s)	221, 777, 782, 879
BseNI	ACTGG	3 cut(s)	135, 530, 703
BseRI	GAGGAG	1 cut(s)	917
BseX3I	CGGCCG	1 cut(s)	1430
BseXI	GCAGC	4 cut(s)	307, 706, 1070, 1197
Bsh1236I	CGCG	1 cut(s)	196
Bsh1285I	CGRYCG	1 cut(s)	1433
BshFI	GGCC	7 cut(s)	687, 728, 870, 1136, 1392, 1432, 1436
BshNI	GGYRCC	1 cut(s)	423
BsiEI	CGRYCG	1 cut(s)	1433
BsiSI	CCGG	5 cut(s)	551, 1111, 1389, 1429, 1433
BslFI	GGGAC	4 cut(s)	174, 709, 1398, 1438
BslI	CCNNNNNNNGG	2 cut(s)	348, 698
BsmFI	GGGAC	4 cut(s)	174, 709, 1398, 1438
BsmI	GAATGC	2 cut(s)	969, 1121
BsnI	GGCC	7 cut(s)	687, 728, 870, 1136, 1392, 1432, 1436
Bsp143I	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
Bsp19I	CCATGG	2 cut(s)	573, 723
BspACI	CCGC	3 cut(s)	323, 1008, 1283
BspANI	GGCC	7 cut(s)	687, 728, 870, 1136, 1392, 1432, 1436
BspCNI	CTCAG	4 cut(s)	222, 778, 783, 878
BspFNI	CGCG	1 cut(s)	196
BspHI	TCATGA	1 cut(s)	91
BspLI	GGNNCC	8 cut(s)	340, 425, 530, 579, 1386, 1387, 1426, 1427
BspMAI	CTGCAG	2 cut(s)	772, 1299
BspMI	ACCTGC	1 cut(s)	1277
BspPI	GGATC	2 cut(s)	43, 438
BspQI	GCTCTTC	1 cut(s)	413
BspT107I	GGYRCC	1 cut(s)	423
BsrDI	GCAATG	1 cut(s)	205
BsrFI	RCCGGY	2 cut(s)	1110, 1432
BsrI	ACTGG	3 cut(s)	135, 530, 703
BssAI	RCCGGY	2 cut(s)	1110, 1432
BssECI	CCNNGG	3 cut(s)	573, 692, 723
BssMI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
BssT1I	CCWWGG	2 cut(s)	573, 723
Bst2UI	CCWGG	3 cut(s)	428, 693, 1274
Bst6I	CTCTTC	4 cut(s)	413, 875, 894, 1323
BstBAI	YACGTR	2 cut(s)	1524, 1553
BstC8I	GCNNGC	5 cut(s)	1134, 1190, 1295, 1434, 1513
BstDEI	CTNAG	5 cut(s)	230, 296, 786, 791, 865
BstDSI	CCRYGG	2 cut(s)	573, 723
BstF5I	GGATG	5 cut(s)	153, 310, 331, 600, 1086
BstFNI	CGCG	1 cut(s)	196
BstHHI	GCGC	2 cut(s)	198, 856
BstKTI	GATC	8 cut(s)	6, 38, 72, 433, 757, 807, 850, 1308
BstMBI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
BstMCI	CGRYCG	1 cut(s)	1433
BstMWI	GCNNNNNNNGC	5 cut(s)	193, 212, 725, 796, 1223
BstNI	CCWGG	3 cut(s)	428, 693, 1274
BstSCI	CCNGG	6 cut(s)	426, 549, 691, 1272, 1387, 1427
BstSFI	CTRYAG	2 cut(s)	768, 1295
BstUI	CGCG	1 cut(s)	196
BstV1I	GCAGC	4 cut(s)	307, 706, 1070, 1197
BstV2I	GAAGAC	2 cut(s)	1018, 1351
BstX2I	RGATCY	2 cut(s)	35, 430
BstYI	RGATCY	2 cut(s)	35, 430
BstZI	CGGCCG	1 cut(s)	1430
BsuI	GTATCC	1 cut(s)	918
BsuRI	GGCC	7 cut(s)	687, 728, 870, 1136, 1392, 1432, 1436
BtgI	CCRYGG	2 cut(s)	573, 723
BtsCI	GGATG	5 cut(s)	153, 310, 331, 600, 1086
BtsI	GCAGTG	1 cut(s)	777
BtsIMutI	CAGTG	4 cut(s)	523, 777, 783, 1061
BveI	ACCTGC	1 cut(s)	1277
Cac8I	GCNNGC	5 cut(s)	1134, 1190, 1295, 1434, 1513
CaiI	CAGNNNCTG	2 cut(s)	698, 1303
CciI	TCATGA	1 cut(s)	91
CfoI	GCGC	2 cut(s)	198, 856
Cfr10I	RCCGGY	2 cut(s)	1110, 1432
Cfr13I	GGNCC	6 cut(s)	47, 686, 1385, 1391, 1425, 1435
CseI	GACGC	1 cut(s)	176
Csp6I	GTAC	2 cut(s)	241, 1105
CspCI	CAANNNNNGTGG	2 cut(s)	697, 732
CviAII	CATG	9 cut(s)	92, 301, 458, 514, 533, 574, 660, 724, 1040
CviQI	GTAC	2 cut(s)	241, 1105
DdeI	CTNAG	5 cut(s)	230, 296, 786, 791, 865
DpnI	GATC	8 cut(s)	5, 37, 71, 432, 756, 806, 849, 1307
DpnII	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
DrdI	GACNNNNNNGTC	1 cut(s)	703
DseDI	GACNNNNNNGTC	1 cut(s)	703
EaeI	YGGCCR	3 cut(s)	726, 1134, 1430
EagI	CGGCCG	1 cut(s)	1430
Eam1104I	CTCTTC	4 cut(s)	413, 875, 894, 1323
EarI	CTCTTC	4 cut(s)	413, 875, 894, 1323
EclXI	CGGCCG	1 cut(s)	1430
Eco130I	CCWWGG	2 cut(s)	573, 723
Eco32I	GATATC	1 cut(s)	274
Eco47I	GGWCC	3 cut(s)	47, 1385, 1425
Eco52I	CGGCCG	1 cut(s)	1430
Eco57I	CTGAAG	1 cut(s)	284
Eco72I	CACGTG	1 cut(s)	1524
EcoO109I	RGGNCCY	2 cut(s)	1385, 1425
EcoRII	CCWGG	3 cut(s)	426, 691, 1272
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	2 cut(s)	573, 723
ErhI	CCWWGG	2 cut(s)	573, 723
FaeI	CATG	9 cut(s)	95, 304, 461, 517, 536, 577, 663, 727, 1043
FalI	AAGNNNNNCTT	2 cut(s)	395, 427
FaqI	GGGAC	4 cut(s)	174, 709, 1398, 1438
FatI	CATG	9 cut(s)	91, 300, 457, 513, 532, 573, 659, 723, 1039
FbaI	TGATCA	2 cut(s)	3, 1305
Fnu4HI	GCNGC	4 cut(s)	321, 720, 1059, 1186
FokI	GGATG	5 cut(s)	140, 317, 338, 587, 1093
FseI	GGCCGGCC	1 cut(s)	1436
Fsp4HI	GCNGC	4 cut(s)	321, 720, 1059, 1186
FspBI	CTAG	2 cut(s)	32, 569
GlaI	GCGC	2 cut(s)	197, 855
GluI	GCNGC	4 cut(s)	321, 720, 1059, 1186
GsuI	CTGGAG	3 cut(s)	547, 675, 1197
HaeIII	GGCC	7 cut(s)	687, 728, 870, 1136, 1392, 1432, 1436
HapII	CCGG	5 cut(s)	551, 1111, 1389, 1429, 1433
HgaI	GACGC	1 cut(s)	176
HhaI	GCGC	2 cut(s)	198, 856
Hin1II	CATG	9 cut(s)	95, 304, 461, 517, 536, 577, 663, 727, 1043
Hin6I	GCGC	2 cut(s)	196, 854
HinP1I	GCGC	2 cut(s)	196, 854
HindIII	AAGCTT	1 cut(s)	500
HinfI	GANTC	3 cut(s)	1066, 1210, 1300
HpaII	CCGG	5 cut(s)	551, 1111, 1389, 1429, 1433
HphI	GGTGA	2 cut(s)	445, 1268
Hpy166II	GTNNAC	1 cut(s)	708
Hpy188I	TCNGA	6 cut(s)	40, 231, 546, 564, 1071, 1305
Hpy188III	TCNNGA	5 cut(s)	92, 277, 360, 758, 1316
Hpy8I	GTNNAC	1 cut(s)	708
HpyAV	CCTTC	7 cut(s)	95, 259, 329, 586, 909, 1071, 1345
HpyCH4IV	ACGT	2 cut(s)	1523, 1552
HpyCH4V	TGCA	6 cut(s)	153, 644, 770, 1058, 1185, 1297
HpyF10VI	GCNNNNNNNGC	5 cut(s)	193, 212, 725, 796, 1223
HpyF3I	CTNAG	5 cut(s)	230, 296, 786, 791, 865
HpySE526I	ACGT	2 cut(s)	1523, 1552
Hsp92II	CATG	9 cut(s)	95, 304, 461, 517, 536, 577, 663, 727, 1043
HspAI	GCGC	2 cut(s)	196, 854
KflI	GGGWCCC	2 cut(s)	1385, 1425
KroI	GCCGGC	1 cut(s)	1432
KroNI	GCCGGC	1 cut(s)	1434
Ksp22I	TGATCA	2 cut(s)	3, 1305
Kzo9I	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
LguI	GCTCTTC	1 cut(s)	413
LmnI	GCTCC	4 cut(s)	338, 528, 577, 1520
Lsp1109I	GCAGC	4 cut(s)	307, 706, 1070, 1197
LweI	GCATC	2 cut(s)	162, 1045
MaeI	CTAG	2 cut(s)	32, 569
MaeII	ACGT	2 cut(s)	1523, 1552
MaeIII	GTNAC	2 cut(s)	519, 955
MalI	GATC	8 cut(s)	5, 37, 71, 432, 756, 806, 849, 1307
MboI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
MflI	RGATCY	2 cut(s)	35, 430
MlsI	TGGCCA	2 cut(s)	728, 1136
MluCI	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
MluNI	TGGCCA	2 cut(s)	728, 1136
MlyI	GAGTC	1 cut(s)	1204
MmeI	TCCRAC	1 cut(s)	1542
Mox20I	TGGCCA	2 cut(s)	728, 1136
MroNI	GCCGGC	1 cut(s)	1432
MscI	TGGCCA	2 cut(s)	728, 1136
MseI	TTAA	2 cut(s)	464, 713
MslI	CAYNNNNRTG	1 cut(s)	1526
Msp20I	TGGCCA	2 cut(s)	728, 1136
MspA1I	CMGCKG	1 cut(s)	1217
MspI	CCGG	5 cut(s)	551, 1111, 1389, 1429, 1433
MspR9I	CCNGG	6 cut(s)	428, 551, 693, 1274, 1389, 1429
Mva1269I	GAATGC	2 cut(s)	969, 1121
MvaI	CCWGG	3 cut(s)	428, 693, 1274
MvnI	CGCG	1 cut(s)	196
MwoI	GCNNNNNNNGC	5 cut(s)	193, 212, 725, 796, 1223
NaeI	GCCGGC	1 cut(s)	1434
NciI	CCSGG	3 cut(s)	551, 1389, 1429
NcoI	CCATGG	2 cut(s)	573, 723
NdeII	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
NgoMIV	GCCGGC	1 cut(s)	1432
NlaIII	CATG	9 cut(s)	95, 304, 461, 517, 536, 577, 663, 727, 1043
NlaIV	GGNNCC	8 cut(s)	340, 425, 530, 579, 1386, 1387, 1426, 1427
NmuCI	GTSAC	1 cut(s)	519
OliI	CACNNNNGTG	1 cut(s)	1526
PagI	TCATGA	1 cut(s)	91
PciSI	GCTCTTC	1 cut(s)	413
PctI	GAATGC	2 cut(s)	969, 1121
PdiI	GCCGGC	1 cut(s)	1434
PfeI	GAWTC	2 cut(s)	1066, 1300
PflMI	CCANNNNNTGG	2 cut(s)	348, 698
PkrI	GCNGC	4 cut(s)	322, 721, 1060, 1187
PleI	GAGTC	1 cut(s)	1204
PmaCI	CACGTG	1 cut(s)	1524
PmlI	CACGTG	1 cut(s)	1524
PpsI	GAGTC	1 cut(s)	1204
Ppu21I	YACGTR	2 cut(s)	1524, 1553
PpuMI	RGGWCCY	2 cut(s)	1385, 1425
PshBI	ATTAAT	1 cut(s)	713
PsiI	TTATAA	1 cut(s)	1564
Psp5II	RGGWCCY	2 cut(s)	1385, 1425
Psp6I	CCWGG	3 cut(s)	426, 691, 1272
PspCI	CACGTG	1 cut(s)	1524
PspGI	CCWGG	3 cut(s)	426, 691, 1272
PspN4I	GGNNCC	8 cut(s)	340, 425, 530, 579, 1386, 1387, 1426, 1427
PspPI	GGNCC	6 cut(s)	47, 686, 1385, 1391, 1425, 1435
PspPPI	RGGWCCY	2 cut(s)	1385, 1425
PstI	CTGCAG	2 cut(s)	772, 1299
PstNI	CAGNNNCTG	2 cut(s)	698, 1303
PsuI	RGATCY	2 cut(s)	35, 430
PvuII	CAGCTG	1 cut(s)	1217
RigI	GGCCGGCC	1 cut(s)	1436
RsaI	GTAC	2 cut(s)	242, 1106
RsaNI	GTAC	2 cut(s)	241, 1105
RseI	CAYNNNNRTG	1 cut(s)	1526
SapI	GCTCTTC	1 cut(s)	413
SaqAI	TTAA	2 cut(s)	464, 713
SatI	GCNGC	4 cut(s)	321, 720, 1059, 1186
Sau3AI	GATC	8 cut(s)	3, 35, 69, 430, 754, 804, 847, 1305
Sau96I	GGNCC	6 cut(s)	47, 686, 1385, 1391, 1425, 1435
SchI	GAGTC	1 cut(s)	1204
ScrFI	CCNGG	6 cut(s)	428, 551, 693, 1274, 1389, 1429
SfaNI	GCATC	2 cut(s)	162, 1045
SfcI	CTRYAG	2 cut(s)	768, 1295
SinI	GGWCC	3 cut(s)	47, 1385, 1425
SmiMI	CAYNNNNRTG	1 cut(s)	1526
SmlI	CTYRAG	1 cut(s)	1534
SmoI	CTYRAG	1 cut(s)	1534
Sse9I	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
SsiI	CCGC	3 cut(s)	323, 1008, 1283
SspMI	CTAG	2 cut(s)	32, 569
StyD4I	CCNGG	6 cut(s)	426, 549, 691, 1272, 1387, 1427
StyI	CCWWGG	2 cut(s)	573, 723
TaiI	ACGT	2 cut(s)	1526, 1555
TaqI	TCGA	4 cut(s)	68, 807, 1053, 1155
TaqII	GACCGA	1 cut(s)	1363
TasI	AATT	7 cut(s)	173, 388, 478, 648, 714, 828, 1097
TatI	WGTACW	1 cut(s)	240
TfiI	GAWTC	2 cut(s)	1066, 1300
Tru1I	TTAA	2 cut(s)	464, 713
Tru9I	TTAA	2 cut(s)	464, 713
TscAI	CASTG	4 cut(s)	530, 777, 790, 1068
TseFI	GTSAC	1 cut(s)	519
TseI	GCWGC	4 cut(s)	320, 719, 1058, 1185
Tsp45I	GTSAC	1 cut(s)	519
TspDTI	ATGAA	5 cut(s)	108, 186, 216, 327, 970
TspRI	CASTG	4 cut(s)	530, 777, 790, 1068
Van91I	CCANNNNNTGG	2 cut(s)	348, 698
VpaK11BI	GGWCC	3 cut(s)	47, 1385, 1425
VspI	ATTAAT	1 cut(s)	713
XapI	RAATTY	2 cut(s)	388, 478
XspI	CTAG	2 cut(s)	32, 569

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.