Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000219

Physical Location & Seq

Genomic Coordinates Reverse (-)

83806405 .. 83814220

Gene Structure 7816 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53713

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGATGATGATGATGGGAGAAATGTGGCCTCAGCTGGGCTCAGTGATTGCCAATTTTGCCATGTTTGCATATGCCATGTTTCAACAATACTTTCCTTATCAACTTCGAGGCCCTATTGAAAAATATACCCAGAAATTGTTCGGCTATGTGTACCCTTACATCCAAATTTCCTTTGATGAATATTCCGGCGAGTGGTTCAAGCGCAGTGAACTCTTTGCTACCATCCAAAGCTACCTCAGCACCAAGTCCTCTACAGAAGCGAAACGACTGAAAGCTCAAGATGTCAAAGACAGCAAGTCTCTAGTCCTTGCCATGGATGATAATGAAGAGGTGACAGATGAGTTTCAAGGCATTAAGCTGTGGTGGGCTTCTAGGAAAAACCCGCCTAAACAATCTTCATTCTCCTTCTATCCTCAGTCTGATGAGAAAAGACATTATAAGCTGACCTTCCACAGACGCCACCGCGATATAATCATGGGGTCTTATCTAGACCATGTGAGGAAACAAGGTAAGGCAATAGCAGTGAGCAACAGGCAAAGAAAGCTCTACATTAACAATCCTGCTCAGAATTGGTCTGGATACAAAGCAACTAAATGGAGCCCTGTAGTCTTTGAGCACCCTGCAACATTTGAGACCATAGCAATGGAGCCGAAAAAGAAAGAGGAAATTGTCAATGACCTCATCAAGTTCAGCAAGGGAAAAGACTACTATGCGAAAATAGGGAAGGCTTGGAAGCGGGGTTATCTCCTGTATGGGCCACCAGGCACTGGTAAGTCCACTATGATTGCTGCCATGTCTAACCTCATGAACTATGATGTTTATGATCTTGAACTGACCACGGTGAAGAACAACACTGAGCTGAGGAAGCTGCTGATTGACACTCCAAACAAGGCTATTATTGTGATTGAGGACATTGATTGCTCCCTTGATCTCACGGGGCAACGAAAGAAGAAGAAGGAGAAGGATGATGAAGATAAAGAAGAAAATGATCCGATTAAGAAAATGAGGGGAGGAGAAGAAAGCAAACCAAGTGAGGTTACGTTATCCGGGCTATTGAACTTCATTGATGGTATTTGGTCAGCTTGTGGAGGTGAAAGAATCATTGTGTTTACCACTAATTATGTGGACAAACTTGATCCTGCTCTCATAAGAAGAGGAAGGATGGACAAGCATATTGAATTGTCCTACTGTTGCTATGAAGCATTCAAAGTGCTTGCAAGGAACTATTTGGATATAGAGTCGCATGAACTGTTTGGTACCATTGAACGGTTGTTGGGGGAGACCAACATGACTCCAGCTGATGTGGCAGAGAATTTGATGCCCAAATCTGATATAGAGGGTGCTGATTCTTGTTTGAAGGCCTTGATTGAAGCTCTCGAGACTGCAAAGGAGGAGGCAAGAGTGAAGGCTGAGGAAGAAATGAGACTGAAAGCAGAGGAAGAAGCCAAACTGAAGGCAGAGAAAGAAGCAAAATTGAAGGAAGAGGAAGAAGCAAAATTGAAGGCAGAGAAAGAAGAGAAGGAAAAGGTCGAGTCTGCTAAAGATGTGGTGAAATGTAAATTATGTAATGGAACATCAGCCAAACAAGACGGGAAAGAAAATGGAGTCATCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006810 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015833 GO:0016043 GO:0022607 GO:0022857 GO:0022884 GO:0033036 GO:0034622 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0051131 GO:0051179 GO:0051234 GO:0055085 GO:0065003 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

538

Amino Acids

61.85

Weight (kDa)

6.76

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	31 - 124	7.8e-28	Domain associated at C-terminal with AAA
AAA	PF00004	248 - 395	2.7e-17	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	397 - 470	5.3e-34	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28580 AT3G28580 AT5G40010
fragaria_vesca	FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica	MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica	Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis	pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis	RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata	RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora	Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii	Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa	Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha	Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana	Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	438
Acc65I	GGTACC	1 cut(s)	1256
AccB1I	GGYRCC	1 cut(s)	1256
AccB7I	CCANNNNNTGG	1 cut(s)	767
AccII	CGCG	1 cut(s)	465
AciI	CCGC	3 cut(s)	383, 463, 736
AclWI	GGATC	2 cut(s)	983, 1130
AcsI	RAATTY	2 cut(s)	165, 1312
AcuI	CTGAAG	1 cut(s)	1472
AcyI	GRCGYC	1 cut(s)	457
AfaI	GTAC	2 cut(s)	152, 1258
AfiI	CCNNNNNNNGG	5 cut(s)	35, 192, 313, 767, 1266
AhdI	GACNNNNNGTC	1 cut(s)	295
AjnI	CCWGG	1 cut(s)	760
Alw21I	GWGCWC	1 cut(s)	618
Alw26I	GTCTC	5 cut(s)	303, 626, 1274, 1373, 1417
AlwI	GGATC	2 cut(s)	983, 1130
AlwNI	CAGNNNCTG	1 cut(s)	767
Ama87I	CYCGRG	1 cut(s)	1376
AoxI	GGCC	4 cut(s)	26, 109, 755, 1359
ApeKI	GCWGC	2 cut(s)	788, 868
ApoI	RAATTY	2 cut(s)	165, 1312
Asp700I	GAANNNNTTC	1 cut(s)	137
Asp718I	GGTACC	1 cut(s)	1256
AspLEI	GCGC	1 cut(s)	204
AspS9I	GGNCC	2 cut(s)	110, 755
AsuC2I	CCSGG	1 cut(s)	1048
AsuHPI	GGTGA	4 cut(s)	343, 853, 1103, 1561
AvaI	CYCGRG	1 cut(s)	1376
BanI	GGYRCC	1 cut(s)	1256
BanII	GRGCYC	2 cut(s)	41, 602
Bbv12I	GWGCWC	1 cut(s)	618
BbvCI	CCTCAGC	4 cut(s)	30, 236, 860, 1410
BbvI	GCAGC	2 cut(s)	775, 855
BccI	CCATC	4 cut(s)	7, 230, 1061, 1156
BciT130I	CCWGG	1 cut(s)	762
BciVI	GTATCC	1 cut(s)	572
BcnI	CCSGG	1 cut(s)	1048
BcoDI	GTCTC	5 cut(s)	303, 626, 1274, 1373, 1417
BfaI	CTAG	3 cut(s)	302, 372, 488
BfmI	CTRYAG	2 cut(s)	252, 603
BfuI	GTATCC	1 cut(s)	572
BisI	GCNGC	2 cut(s)	789, 869
BlsI	GCNGC	2 cut(s)	790, 870
Bme1390I	CCNGG	2 cut(s)	762, 1048
BmeRI	GACNNNNNGTC	1 cut(s)	295
BmeT110I	CYCGRG	1 cut(s)	1376
BmgT120I	GGNCC	2 cut(s)	110, 755
BmiI	GGNNCC	3 cut(s)	599, 648, 1258
BmrFI	CCNGG	2 cut(s)	762, 1048
BmsI	GCATC	1 cut(s)	1308
BpmI	CTGGAG	1 cut(s)	1278
Bpu10I	CCTNAGC	4 cut(s)	30, 236, 860, 1410
BpuEI	CTTGAG	1 cut(s)	261
BpuMI	CCSGG	1 cut(s)	1048
BsaHI	GRCGYC	1 cut(s)	457
BsaI	GGTCTC	2 cut(s)	626, 1274
BsaJI	CCNNGG	2 cut(s)	312, 837
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 192, 313, 767, 1266
Bse1I	ACTGG	1 cut(s)	772
Bse3DI	GCAATG	1 cut(s)	648
BseBI	CCWGG	1 cut(s)	762
BseDI	CCNNGG	2 cut(s)	312, 837
BseGI	GGATG	6 cut(s)	159, 222, 322, 970, 1167, 1608
BseLI	CCNNNNNNNGG	5 cut(s)	35, 192, 313, 767, 1266
BseMI	GCAATG	1 cut(s)	648
BseMII	CTCAG	8 cut(s)	44, 54, 250, 428, 578, 846, 851, 1401
BseNI	ACTGG	1 cut(s)	772
BseRI	GAGGAG	2 cut(s)	1026, 1406
BseXI	GCAGC	2 cut(s)	775, 855
BseYI	CCCAGC	1 cut(s)	34
Bsh1236I	CGCG	1 cut(s)	465
BshFI	GGCC	4 cut(s)	28, 111, 757, 1361
BshNI	GGYRCC	1 cut(s)	1256
BsiHKAI	GWGCWC	1 cut(s)	618
BsiHKCI	CYCGRG	1 cut(s)	1376
BsiSI	CCGG	2 cut(s)	186, 1047
BslI	CCNNNNNNNGG	5 cut(s)	35, 192, 313, 767, 1266
BsmAI	GTCTC	5 cut(s)	303, 626, 1274, 1373, 1417
BsmI	GAATGC	1 cut(s)	1202
BsnI	GGCC	4 cut(s)	28, 111, 757, 1361
Bso31I	GGTCTC	2 cut(s)	626, 1274
BsoBI	CYCGRG	1 cut(s)	1376
Bsp1286I	GDGCHC	3 cut(s)	41, 602, 618
Bsp143I	GATC	4 cut(s)	823, 928, 988, 1135
Bsp19I	CCATGG	1 cut(s)	312
BspACI	CCGC	3 cut(s)	383, 463, 736
BspANI	GGCC	4 cut(s)	28, 111, 757, 1361
BspCNI	CTCAG	8 cut(s)	43, 53, 249, 427, 577, 847, 852, 1402
BspFNI	CGCG	1 cut(s)	465
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	3 cut(s)	599, 648, 1258
BspPI	GGATC	2 cut(s)	983, 1130
BspT107I	GGYRCC	1 cut(s)	1256
BspTNI	GGTCTC	2 cut(s)	626, 1274
BsrDI	GCAATG	1 cut(s)	648
BsrI	ACTGG	1 cut(s)	772
BssECI	CCNNGG	2 cut(s)	312, 837
BssMI	GATC	4 cut(s)	823, 928, 988, 1135
BssNI	GRCGYC	1 cut(s)	457
BssT1I	CCWWGG	1 cut(s)	312
Bst2UI	CCWGG	1 cut(s)	762
Bst4CI	ACNGT	4 cut(s)	841, 1190, 1251, 1269
Bst6I	CTCTTC	4 cut(s)	321, 1147, 1476, 1509
BstACI	GRCGYC	1 cut(s)	457
BstC8I	GCNNGC	1 cut(s)	1215
BstDEI	CTNAG	8 cut(s)	30, 40, 236, 414, 564, 855, 860, 1410
BstDSI	CCRYGG	2 cut(s)	312, 837
BstF5I	GGATG	6 cut(s)	159, 222, 322, 970, 1167, 1608
BstFNI	CGCG	1 cut(s)	465
BstHHI	GCGC	1 cut(s)	204
BstKTI	GATC	4 cut(s)	826, 931, 991, 1138
BstMAI	GTCTC	5 cut(s)	303, 626, 1274, 1373, 1417
BstMBI	GATC	4 cut(s)	823, 928, 988, 1135
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 65, 237, 541, 865, 1304
BstNI	CCWGG	1 cut(s)	762
BstSCI	CCNGG	2 cut(s)	760, 1046
BstSFI	CTRYAG	2 cut(s)	252, 603
BstUI	CGCG	1 cut(s)	465
BstV1I	GCAGC	2 cut(s)	775, 855
BstXI	CCANNNNNNTGG	1 cut(s)	643
BsuI	GTATCC	1 cut(s)	572
BsuRI	GGCC	4 cut(s)	28, 111, 757, 1361
BtgI	CCRYGG	2 cut(s)	312, 837
BtsCI	GGATG	6 cut(s)	159, 222, 322, 970, 1167, 1608
BtsI	GCAGTG	2 cut(s)	211, 528
BtsIMutI	CAGTG	5 cut(s)	48, 211, 528, 765, 852
Cac8I	GCNNGC	1 cut(s)	1215
CaiI	CAGNNNCTG	1 cut(s)	767
CciI	TCATGA	1 cut(s)	804
CfoI	GCGC	1 cut(s)	204
Cfr13I	GGNCC	2 cut(s)	110, 755
CseI	GACGC	1 cut(s)	465
Csp6I	GTAC	2 cut(s)	151, 1257
CspCI	CAANNNNNGTGG	2 cut(s)	766, 801
CviAII	CATG	9 cut(s)	61, 76, 313, 475, 494, 793, 805, 1244, 1288
CviQI	GTAC	2 cut(s)	151, 1257
DdeI	CTNAG	8 cut(s)	30, 40, 236, 414, 564, 855, 860, 1410
DpnI	GATC	4 cut(s)	825, 930, 990, 1137
DpnII	GATC	4 cut(s)	823, 928, 988, 1135
DriI	GACNNNNNGTC	1 cut(s)	295
Eam1104I	CTCTTC	4 cut(s)	321, 1147, 1476, 1509
Eam1105I	GACNNNNNGTC	1 cut(s)	295
EarI	CTCTTC	4 cut(s)	321, 1147, 1476, 1509
Eco130I	CCWWGG	1 cut(s)	312
Eco147I	AGGCCT	1 cut(s)	1361
Eco24I	GRGCYC	2 cut(s)	41, 602
Eco31I	GGTCTC	2 cut(s)	626, 1274
Eco57I	CTGAAG	1 cut(s)	1472
Eco88I	CYCGRG	1 cut(s)	1376
EcoO109I	RGGNCCY	1 cut(s)	110
EcoRII	CCWGG	1 cut(s)	760
EcoT14I	CCWWGG	1 cut(s)	312
EcoT38I	GRGCYC	2 cut(s)	41, 602
ErhI	CCWWGG	1 cut(s)	312
FaeI	CATG	9 cut(s)	64, 79, 316, 478, 497, 796, 808, 1247, 1291
FalI	AAGNNNNNCTT	2 cut(s)	431, 463
FatI	CATG	9 cut(s)	60, 75, 312, 474, 493, 792, 804, 1243, 1287
FauI	CCCGC	2 cut(s)	390, 729
FauNDI	CATATG	1 cut(s)	70
Fnu4HI	GCNGC	2 cut(s)	789, 869
FokI	GGATG	6 cut(s)	146, 209, 329, 977, 1174, 1595
FriOI	GRGCYC	2 cut(s)	41, 602
Fsp4HI	GCNGC	2 cut(s)	789, 869
FspBI	CTAG	3 cut(s)	302, 372, 488
GlaI	GCGC	1 cut(s)	203
GluI	GCNGC	2 cut(s)	789, 869
GsaI	CCCAGC	1 cut(s)	38
GsuI	CTGGAG	1 cut(s)	1278
HaeIII	GGCC	4 cut(s)	28, 111, 757, 1361
HapII	CCGG	2 cut(s)	186, 1047
HgaI	GACGC	1 cut(s)	465
HhaI	GCGC	1 cut(s)	204
Hin1I	GRCGYC	1 cut(s)	457
Hin1II	CATG	9 cut(s)	64, 79, 316, 478, 497, 796, 808, 1247, 1291
Hin6I	GCGC	1 cut(s)	202
HinP1I	GCGC	1 cut(s)	202
HinfI	GANTC	6 cut(s)	1098, 1238, 1291, 1346, 1532, 1605
HpaII	CCGG	2 cut(s)	186, 1047
HphI	GGTGA	4 cut(s)	343, 853, 1103, 1561
Hpy166II	GTNNAC	5 cut(s)	151, 209, 777, 1110, 1126
Hpy188I	TCNGA	4 cut(s)	421, 567, 993, 1330
Hpy188III	TCNNGA	7 cut(s)	278, 488, 576, 805, 827, 1376, 1378
Hpy8I	GTNNAC	5 cut(s)	151, 209, 777, 1110, 1126
HpyCH4III	ACNGT	4 cut(s)	841, 1190, 1251, 1269
HpyCH4IV	ACGT	1 cut(s)	1040
HpyCH4V	TGCA	4 cut(s)	68, 623, 1217, 1385
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 65, 237, 541, 865, 1304
HpyF3I	CTNAG	8 cut(s)	30, 40, 236, 414, 564, 855, 860, 1410
HpySE526I	ACGT	1 cut(s)	1040
Hsp92I	GRCGYC	1 cut(s)	457
Hsp92II	CATG	9 cut(s)	64, 79, 316, 478, 497, 796, 808, 1247, 1291
HspAI	GCGC	1 cut(s)	202
KpnI	GGTACC	1 cut(s)	1260
Kzo9I	GATC	4 cut(s)	823, 928, 988, 1135
LmnI	GCTCC	3 cut(s)	597, 646, 926
Lsp1109I	GCAGC	2 cut(s)	775, 855
LweI	GCATC	1 cut(s)	1308
MaeI	CTAG	3 cut(s)	302, 372, 488
MaeII	ACGT	1 cut(s)	1040
MaeIII	GTNAC	2 cut(s)	331, 1036
MalI	GATC	4 cut(s)	825, 930, 990, 1137
MboI	GATC	4 cut(s)	823, 928, 988, 1135
MhlI	GDGCHC	3 cut(s)	41, 602, 618
MlyI	GAGTC	4 cut(s)	1247, 1285, 1541, 1614
MroXI	GAANNNNTTC	1 cut(s)	137
MseI	TTAA	3 cut(s)	354, 552, 996
MslI	CAYNNNNRTG	1 cut(s)	641
MspA1I	CMGCKG	2 cut(s)	34, 1298
MspI	CCGG	2 cut(s)	186, 1047
MspR9I	CCNGG	2 cut(s)	762, 1048
Mva1269I	GAATGC	1 cut(s)	1202
MvaI	CCWGG	1 cut(s)	762
MvnI	CGCG	1 cut(s)	465
MwoI	GCNNNNNNNGC	6 cut(s)	56, 65, 237, 541, 865, 1304
NciI	CCSGG	1 cut(s)	1048
NcoI	CCATGG	1 cut(s)	312
NdeI	CATATG	1 cut(s)	70
NdeII	GATC	4 cut(s)	823, 928, 988, 1135
NlaIII	CATG	9 cut(s)	64, 79, 316, 478, 497, 796, 808, 1247, 1291
NlaIV	GGNNCC	3 cut(s)	599, 648, 1258
NmuCI	GTSAC	1 cut(s)	331
PaeR7I	CTCGAG	1 cut(s)	1376
PagI	TCATGA	1 cut(s)	804
PceI	AGGCCT	1 cut(s)	1361
PctI	GAATGC	1 cut(s)	1202
PdmI	GAANNNNTTC	1 cut(s)	137
PfeI	GAWTC	2 cut(s)	1098, 1346
PflMI	CCANNNNNTGG	1 cut(s)	767
PkrI	GCNGC	2 cut(s)	790, 870
PleI	GAGTC	4 cut(s)	1246, 1285, 1540, 1613
PpsI	GAGTC	4 cut(s)	1246, 1285, 1540, 1613
PsiI	TTATAA	1 cut(s)	438
Psp6I	CCWGG	1 cut(s)	760
PspFI	CCCAGC	1 cut(s)	34
PspGI	CCWGG	1 cut(s)	760
PspN4I	GGNNCC	3 cut(s)	599, 648, 1258
PspPI	GGNCC	2 cut(s)	110, 755
PstNI	CAGNNNCTG	1 cut(s)	767
PvuII	CAGCTG	2 cut(s)	34, 1298
RsaI	GTAC	2 cut(s)	152, 1258
RsaNI	GTAC	2 cut(s)	151, 1257
RseI	CAYNNNNRTG	1 cut(s)	641
SaqAI	TTAA	3 cut(s)	354, 552, 996
SatI	GCNGC	2 cut(s)	789, 869
Sau3AI	GATC	4 cut(s)	823, 928, 988, 1135
Sau96I	GGNCC	2 cut(s)	110, 755
SchI	GAGTC	4 cut(s)	1247, 1285, 1541, 1614
ScrFI	CCNGG	2 cut(s)	762, 1048
SduI	GDGCHC	3 cut(s)	41, 602, 618
SfaNI	GCATC	1 cut(s)	1308
SfcI	CTRYAG	2 cut(s)	252, 603
Sfr274I	CTCGAG	1 cut(s)	1376
SlaI	CTCGAG	1 cut(s)	1376
SmiMI	CAYNNNNRTG	1 cut(s)	641
SmlI	CTYRAG	2 cut(s)	276, 1376
SmoI	CTYRAG	2 cut(s)	276, 1376
SseBI	AGGCCT	1 cut(s)	1361
SsiI	CCGC	3 cut(s)	383, 463, 736
SspI	AATATT	1 cut(s)	182
SspMI	CTAG	3 cut(s)	302, 372, 488
StuI	AGGCCT	1 cut(s)	1361
StyD4I	CCNGG	2 cut(s)	760, 1046
StyI	CCWWGG	1 cut(s)	312
TaaI	ACNGT	4 cut(s)	841, 1190, 1251, 1269
TaiI	ACGT	1 cut(s)	1043
TaqI	TCGA	3 cut(s)	106, 1377, 1530
TfiI	GAWTC	2 cut(s)	1098, 1346
Tru1I	TTAA	3 cut(s)	354, 552, 996
Tru9I	TTAA	3 cut(s)	354, 552, 996
TscAI	CASTG	5 cut(s)	48, 211, 528, 772, 859
TseFI	GTSAC	1 cut(s)	331
TseI	GCWGC	2 cut(s)	788, 868
Tsp45I	GTSAC	1 cut(s)	331
TspDTI	ATGAA	8 cut(s)	192, 339, 387, 821, 984, 1051, 1212, 1260
TspRI	CASTG	5 cut(s)	48, 211, 528, 772, 859
Van91I	CCANNNNNTGG	1 cut(s)	767
XapI	RAATTY	2 cut(s)	165, 1312
XbaI	TCTAGA	1 cut(s)	487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1120
XhoI	CTCGAG	1 cut(s)	1376
XmnI	GAANNNNTTC	1 cut(s)	137
XspI	CTAG	3 cut(s)	302, 372, 488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.