MD17G1045600.v1.1

mitochondrial chaperone

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
3288422 .. 3289861
1440 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1045600.v1.1.491

Sequence Viewer

Length: 1440 bp
ATGTTTCCGGCAACCATTTTTGCCAACTTCGGATCGGCGATCGGCGGGTTAATGTTCGTGTGGGCGATATTCCAGCAGTACTTCCCCTACGAGCTTCGAAGGCATGTCGAAAAGTACTCGCAGAGAATGGTGGGATATGTGTATCCTTACATTCAGATCACTTTCAATGAGTTCACCGGGGAGCGGCTGATGCGCAGCGAGGCTTACTCCGCCATCGAGAACTACCTGAGCTCCAAGTCCTCCACGCAAGCGAAGCGCCTCAAGGGCGACATCAAGAACAACCAGTCGCTTGTTCTGAGCATGGACGATCACGAGGAAGTGGATGACGAGTTCAAGGGAGTCAAAGTGTGGTGGGCGTCCGGGAAGTACATAGCGAAGCAGCAGACAGTCTCGTACGTTCCGGTGAACGATGAGAGGAGGTACTACAAGCTCACTTTTCACAAATGGCAGAGGGAGCAGATCATTGGACCCTACCTTAGCCATGTCCTGAAGGAGGGGAAGGCCATTAGGGTTAGAAACCGGCAGAGGAAGCTTTACACGAACAATGGCTCCCACTGGAGCCATGTGGTGTTTGAGCACCCTGCAACATTTGAGACTCTGGCTATGGAGGTGGAGAAGAAGCAGGACATTGTCGATGATCTGATGGCGTTCAGCAAGGCTGAGGAGTTTTATGCGCGGATTGGGCGGGCTTGGAAGAGGGGTTACCTTTTGTATGGGCCGCCGGGGACTGGGAAATCCACCATGATCGCCGCCATGGCCAATCTTTTGGAGTATGATCTTTATGACCTCGAGCTGACCGCGGTTAAGGACAACACCGAGCTGAGGAGGCTGCTGATTGAGACGACAAGTAAGTCGATTATTGTGATTGAGGACATCGATTGTTCGCTTGATCTCACGGGGCAGAGGAAGCAGAGGAAGGAGAAAGGGGAGGAGCAGGGGGAAGGGAGGGATCCGAAGGAGAAGATGGGGAAGGAGGATGGGGAGGCGAAACCGAGCCAGGTTACTCTTTCCGGGCTGCTGAATTTCATCGACGGGCTGTGGTCAGCGTGCCGCGGAGAGAGGCTCATTGTGTTCACAACGAACTACGTGGAGAAGCTTGATGCTGCATTGATCAGGAAAGGAAGGATGGATAAGCACATTGAATTGTCATACTGTAACTACGAATCCTTCAAGGTGCTGGCTAGGAACTACCTCAAGCTCGAATCACACCGCTTGTTTCCGGAAATTGGAGCGTTGCTTGGGGAAGTTAAGATGACTCCGGCTGATGTTGCAGAGCATTTGATGCCCAAGAAACTTTCCGGGGATGTCGAAATCTGCCTGCACAGTCTGTTCCAAGCTCTCCAGAAGGAAAAGGAGAGTGGAGGATTGAAGGCTGAGGAAGAAGCGAAAGAGGAGAAATCGCCATTGGCTGCAGAATCACCATCATCTAACAAAAAATGA

Protein Analysis

480

Amino Acids

55.04

Weight (kDa)

7.64

Isoelectric Point (pI)

40.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_assoc PF14363 28 - 120 2.7e-27 Domain associated at C-terminal with AAA
AAA PF00004 235 - 383 5e-16 ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540 PF25568 385 - 453 1.2e-28 At3g28540-like, AAA+ ATPase lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000219)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G28580 AT3G28580 AT5G40010
fragaria_vesca FvH4_5g15870 FvH4_6g49542 FvH4_6g49550 FvH4_6g49560 FvH4_6g49580
malus_domestica MD09G1043700.v1.1 MD09G1043800.v1.1 MD09G1043900.v1.1 MD14G1190900.v1.1 MD17G1045300.v1.1 MD17G1045500.v1.1 MD17G1045600.v1.1
prunus_persica Prupe.3G273800_v2.0.a1 Prupe.3G273900_v2.0.a1 Prupe.3G274100_v2.0.a1 Prupe.3G274200_v2.0.a1 Prupe.3G274300_v2.0.a1 Prupe.5G183800_v2.0.a1
pyrus_communis pycom111g03400 pycom111g03410 pycom14g15860 pycom17g04010 pycom17g04040 pycom17g04070 pycom17g04080
rosa_chinensis RchiOBHm_Chr2g0169521 RchiOBHm_Chr2g0169541 RchiOBHm_Chr2g0169551 RchiOBHm_Chr2g0169571 RchiOBHm_Chr2g0169581 RchiOBHm_Chr2g0169591 RchiOBHm_Chr2g0170131 RchiOBHm_Chr7g0180181
rosa_laevigata RLG00000005284 RLG00000021869 RLG00000021870 RLG00000021871 RLG00000021872 RLG00000021873 RLG00000021878 RLG00000021879 RLG00000021880 RLG00000021881 RLG00000021882 RLG00000021883 RLG00000021884 RLG00000021885 RLG00000021886 RLG00000021926 RLG00000021927
rosa_multiflora Rmu_co8112588.1_g000001 Rmu_co8118398.1_g000001 Rmu_co8187516.1_g000001 Rmu_co8476833.1_g000001 Rmu_sc0006806.1_g000003 Rmu_sc0006806.1_g000004 Rmu_sc0006806.1_g000005 Rmu_sc0006806.1_g000007 Rmu_sc0006806.1_g000008 Rmu_sc0006806.1_g000009 Rmu_sc0006806.1_g000010 Rmu_sc0006806.1_g000011 Rmu_sc0006806.1_g000012 Rmu_sc0006806.1_g000013 Rmu_sc0006806.1_g000026 Rmu_sc0006806.1_g000027 Rmu_sc0011963.1_g000001 Rmu_sc0013078.1_g000004 Rmu_sc0019635.1_g000002 Rmu_sc0019635.1_g000003 Rmu_sc0019635.1_g000004 Rmu_sc0019635.1_g000005 Rmu_sc0019635.1_g000006 Rmu_sc0019635.1_g000007 Rmu_sc0019635.1_g000008 Rmu_sc0019635.1_g000009
rosa_roxburghii Rroxscaffold_2G00081990 Rroxscaffold_2G00082000 Rroxscaffold_2G00082010 Rroxscaffold_2G00082020 Rroxscaffold_2G00082030 Rroxscaffold_2G00082040 Rroxscaffold_2G00082050 Rroxscaffold_3G00273050
rosa_rugosa Rorug02G0540500 Rorug02G0540600 Rorug02G0540700 Rorug02G0540800 Rorug02G0540900 Rorug02G0541000 Rorug02G0541100 Rorug02G0541100 Rorug02G0541200 Rorug02G0541300 Rorug02G0546000.1 Rorug06G0431600
rosa_samantha Rh2AG611900 Rh2AG612000 Rh2AG612100 Rh2AG612200 Rh2AG613000 Rh2AG613100 Rh2AG613200 Rh2AG613300 Rh2AG613400 Rh2AG613500 Rh2AG613600 Rh2AG613700 Rh2AG618200 Rh2BG625700 Rh2BG625800 Rh2BG625900 Rh2CG593800 Rh2CG593900 Rh2CG594300 Rh2CG594400 Rh2CG594500 Rh2CG594600 Rh2CG594800 Rh2CG594900 Rh2CG595000 Rh2CG595100 Rh2CG599000 Rh2DG636100 Rh2DG636200 Rh2DG636300 Rh2DG636400 Rh2DG636500 Rh2DG636600 Rh2DG636700 Rh2DG636800 Rh2DG636900 Rh2DG641400 Rh7AG031800 Rh7BG031800
rosa_wichuraiana Rw2G050750 Rw2G050790 Rw2G050820 Rw2G050830 Rw2G050840 Rw2G050850 Rw2G050860 Rw2G051180 Rw7G002650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 850
Acc16I TGCGCA 1 cut(s) 194
AccBSI CCGCTC 1 cut(s) 184
AccII CGCG 3 cut(s) 676, 800, 1053
AccIII TCCGGA 1 cut(s) 1219
AclWI GGATC 3 cut(s) 40, 944, 957
AcoI YGGCCR 1 cut(s) 756
AcsI RAATTY 1 cut(s) 1021
AcuI CTGAAG 1 cut(s) 509
AcyI GRCGYC 1 cut(s) 356
AfaI GTAC 5 cut(s) 80, 116, 368, 395, 422
AfiI CCNNNNNNNGG 5 cut(s) 183, 493, 728, 822, 1226
AgsI TTSAA 5 cut(s) 166, 334, 1142, 1171, 1369
AjnI CCWGG 1 cut(s) 996
AjuI GAANNNNNNNTTGG 2 cut(s) 1388, 1420
AloI GAACNNNNNNTCC 4 cut(s) 314, 346, 533, 565
AluBI AGCT 9 cut(s) 94, 231, 430, 532, 793, 820, 1096, 1198, 1337
AluI AGCT 9 cut(s) 94, 231, 430, 532, 793, 820, 1096, 1198, 1337
Alw21I GWGCWC 2 cut(s) 233, 579
Alw26I GTCTC 3 cut(s) 394, 587, 833
AlwI GGATC 3 cut(s) 40, 944, 957
Ama87I CYCGRG 1 cut(s) 788
Aor13HI TCCGGA 1 cut(s) 1219
AoxI GGCC 3 cut(s) 501, 716, 756
ApeKI GCWGC 6 cut(s) 195, 379, 829, 1015, 1103, 1409
ApoI RAATTY 1 cut(s) 1021
AspLEI GCGC 3 cut(s) 195, 258, 676
AspS9I GGNCC 2 cut(s) 467, 716
AsuC2I CCSGG 5 cut(s) 178, 361, 723, 1012, 1300
AsuHPI GGTGA 3 cut(s) 166, 415, 1410
AsuII TTCGAA 1 cut(s) 97
AvaI CYCGRG 1 cut(s) 788
AvaII GGWCC 1 cut(s) 467
BalI TGGCCA 1 cut(s) 758
BamHI GGATCC 1 cut(s) 949
BanII GRGCYC 1 cut(s) 233
BarI GAAGNNNNNNTAC 2 cut(s) 686, 718
BauI CACGAG 1 cut(s) 311
Bbv12I GWGCWC 2 cut(s) 233, 579
BbvCI CCTCAGC 3 cut(s) 660, 821, 1374
BbvI GCAGC 6 cut(s) 207, 391, 816, 1002, 1090, 1396
BccI CCATC 6 cut(s) 221, 637, 958, 971, 1120, 1429
BciT130I CCWGG 1 cut(s) 998
BciVI GTATCC 1 cut(s) 153
BclI TGATCA 1 cut(s) 1110
BcnI CCSGG 5 cut(s) 178, 361, 723, 1012, 1300
BcoDI GTCTC 3 cut(s) 394, 587, 833
BfaI CTAG 1 cut(s) 1182
BfmI CTRYAG 1 cut(s) 1410
BfoI RGCGCY 1 cut(s) 259
BfuI GTATCC 1 cut(s) 153
BglI GCCNNNNNGGC 2 cut(s) 264, 755
BmcAI AGTACT 2 cut(s) 80, 116
Bme1390I CCNGG 6 cut(s) 178, 361, 723, 998, 1012, 1300
Bme18I GGWCC 1 cut(s) 467
BmeT110I CYCGRG 1 cut(s) 788
BmgT120I GGNCC 2 cut(s) 467, 716
BmiI GGNNCC 4 cut(s) 469, 550, 560, 951
BmrFI CCNGG 6 cut(s) 178, 361, 723, 998, 1012, 1300
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 3 cut(s) 180, 1090, 1272
BmuI ACTGGG 1 cut(s) 738
BplI GAGNNNNNCTC 4 cut(s) 191, 223, 1047, 1079
BpmI CTGGAG 2 cut(s) 577, 1325
Bpu10I CCTNAGC 5 cut(s) 227, 476, 660, 821, 1374
Bpu14I TTCGAA 1 cut(s) 97
BpuEI CTTGAG 2 cut(s) 245, 1178
BpuMI CCSGG 5 cut(s) 178, 361, 723, 1012, 1300
Bsa29I ATCGAT 1 cut(s) 876
BsaAI YACGTR 1 cut(s) 1087
BsaHI GRCGYC 1 cut(s) 356
BsaJI CCNNGG 6 cut(s) 177, 722, 753, 798, 1051, 1299
BsaWI WCCGGW 2 cut(s) 400, 1219
BsaXI ACNNNNNCTCC 6 cut(s) 215, 245, 330, 360, 533, 563
Bsc4I CCNNNNNNNGG 5 cut(s) 183, 493, 728, 822, 1226
Bse118I RCCGGY 1 cut(s) 519
Bse1I ACTGG 3 cut(s) 283, 560, 733
BseAI TCCGGA 1 cut(s) 1219
BseBI CCWGG 1 cut(s) 998
BseCI ATCGAT 1 cut(s) 876
BseDI CCNNGG 6 cut(s) 177, 722, 753, 798, 1051, 1299
BseGI GGATG 4 cut(s) 328, 982, 1131, 1309
BseLI CCNNNNNNNGG 5 cut(s) 183, 493, 728, 822, 1226
BseMII CTCAG 5 cut(s) 218, 287, 651, 812, 1365
BseNI ACTGG 3 cut(s) 283, 560, 733
BseRI GAGGAG 5 cut(s) 430, 677, 838, 944, 1406
BseXI GCAGC 6 cut(s) 207, 391, 816, 1002, 1090, 1396
BsgI GTGCAG 1 cut(s) 1304
Bsh1236I CGCG 3 cut(s) 676, 800, 1053
Bsh1285I CGRYCG 1 cut(s) 42
BshFI GGCC 3 cut(s) 503, 718, 758
BshVI ATCGAT 1 cut(s) 876
BsiEI CGRYCG 1 cut(s) 42
BsiHKAI GWGCWC 2 cut(s) 233, 579
BsiHKCI CYCGRG 1 cut(s) 788
BsiWI CGTACG 1 cut(s) 393
BslFI GGGAC 1 cut(s) 739
BslI CCNNNNNNNGG 5 cut(s) 183, 493, 728, 822, 1226
BsmAI GTCTC 3 cut(s) 394, 587, 833
BsmBI CGTCTC 1 cut(s) 833
BsmFI GGGAC 1 cut(s) 739
BsnI GGCC 3 cut(s) 503, 718, 758
BsoBI CYCGRG 1 cut(s) 788
Bsp119I TTCGAA 1 cut(s) 97
Bsp1286I GDGCHC 2 cut(s) 233, 579
Bsp13I TCCGGA 1 cut(s) 1219
Bsp19I CCATGG 1 cut(s) 753
BspANI GGCC 3 cut(s) 503, 718, 758
BspCNI CTCAG 5 cut(s) 219, 288, 652, 813, 1366
BspDI ATCGAT 1 cut(s) 876
BspEI TCCGGA 1 cut(s) 1219
BspFNI CGCG 3 cut(s) 676, 800, 1053
BspLI GGNNCC 4 cut(s) 469, 550, 560, 951
BspMAI CTGCAG 1 cut(s) 1414
BspPI GGATC 3 cut(s) 40, 944, 957
BspT104I TTCGAA 1 cut(s) 97
BsrBI CCGCTC 1 cut(s) 184
BsrFI RCCGGY 1 cut(s) 519
BsrI ACTGG 3 cut(s) 283, 560, 733
BssAI RCCGGY 1 cut(s) 519
BssECI CCNNGG 6 cut(s) 177, 722, 753, 798, 1051, 1299
BssNI GRCGYC 1 cut(s) 356
BssSI CACGAG 1 cut(s) 311
BssT1I CCWWGG 1 cut(s) 753
Bst2BI CACGAG 1 cut(s) 311
Bst2UI CCWGG 1 cut(s) 998
Bst4CI ACNGT 3 cut(s) 388, 1154, 1325
Bst6I CTCTTC 1 cut(s) 689
BstACI GRCGYC 1 cut(s) 356
BstAPI GCANNNNNTGC 1 cut(s) 1282
BstBAI YACGTR 1 cut(s) 1087
BstBI TTCGAA 1 cut(s) 97
BstC8I GCNNGC 5 cut(s) 249, 687, 1048, 1179, 1319
BstDEI CTNAG 6 cut(s) 227, 296, 476, 660, 821, 1374
BstDSI CCRYGG 3 cut(s) 753, 798, 1051
BstEII GGTNACC 1 cut(s) 701
BstENI CCTNNNNNAGG 1 cut(s) 491
BstF5I GGATG 4 cut(s) 328, 982, 1131, 1309
BstFNI CGCG 3 cut(s) 676, 800, 1053
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 3 cut(s) 195, 258, 676
BstMAI GTCTC 3 cut(s) 394, 587, 833
BstMCI CGRYCG 1 cut(s) 42
BstNI CCWGG 1 cut(s) 998
BstNSI RCATGY 1 cut(s) 107
BstPI GGTNACC 1 cut(s) 701
BstSCI CCNGG 6 cut(s) 176, 359, 721, 996, 1010, 1298
BstSFI CTRYAG 1 cut(s) 1410
BstUI CGCG 3 cut(s) 676, 800, 1053
BstV1I GCAGC 6 cut(s) 207, 391, 816, 1002, 1090, 1396
BstX2I RGATCY 1 cut(s) 949
BstXI CCANNNNNNTGG 1 cut(s) 766
BstYI RGATCY 1 cut(s) 949
Bsu15I ATCGAT 1 cut(s) 876
BsuI GTATCC 1 cut(s) 153
BsuRI GGCC 3 cut(s) 503, 718, 758
BsuTUI ATCGAT 1 cut(s) 876
BtgI CCRYGG 3 cut(s) 753, 798, 1051
BtsCI GGATG 4 cut(s) 328, 982, 1131, 1309
BtsIMutI CAGTG 1 cut(s) 553
Cac8I GCNNGC 5 cut(s) 249, 687, 1048, 1179, 1319
CfoI GCGC 3 cut(s) 195, 258, 676
Cfr10I RCCGGY 1 cut(s) 519
Cfr13I GGNCC 2 cut(s) 467, 716
Cfr42I CCGCGG 2 cut(s) 801, 1054
ClaI ATCGAT 1 cut(s) 876
CseI GACGC 1 cut(s) 345
Csp6I GTAC 5 cut(s) 79, 115, 367, 394, 421
CviAII CATG 6 cut(s) 104, 301, 482, 563, 742, 754
CviQI GTAC 5 cut(s) 79, 115, 367, 394, 421
DdeI CTNAG 6 cut(s) 227, 296, 476, 660, 821, 1374
DrdI GACNNNNNNGTC 1 cut(s) 850
DseDI GACNNNNNNGTC 1 cut(s) 850
EaeI YGGCCR 1 cut(s) 756
Eam1104I CTCTTC 1 cut(s) 689
EarI CTCTTC 1 cut(s) 689
EciI GGCGGA 1 cut(s) 199
Ecl136II GAGCTC 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 753
Eco24I GRGCYC 1 cut(s) 233
Eco47I GGWCC 1 cut(s) 467
Eco53kI GAGCTC 1 cut(s) 231
Eco57I CTGAAG 1 cut(s) 509
Eco88I CYCGRG 1 cut(s) 788
Eco91I GGTNACC 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 231
EcoNI CCTNNNNNAGG 1 cut(s) 491
EcoO65I GGTNACC 1 cut(s) 701
EcoRII CCWGG 1 cut(s) 996
EcoT14I CCWWGG 1 cut(s) 753
EcoT38I GRGCYC 1 cut(s) 233
ErhI CCWWGG 1 cut(s) 753
Esp3I CGTCTC 1 cut(s) 833
FaeI CATG 6 cut(s) 107, 304, 485, 566, 745, 757
FaqI GGGAC 1 cut(s) 739
FatI CATG 6 cut(s) 103, 300, 481, 562, 741, 753
FauI CCCGC 2 cut(s) 38, 678
FbaI TGATCA 1 cut(s) 1110
FokI GGATG 4 cut(s) 335, 989, 1138, 1316
FriOI GRGCYC 1 cut(s) 233
FspBI CTAG 1 cut(s) 1182
FspI TGCGCA 1 cut(s) 194
GlaI GCGC 3 cut(s) 194, 257, 675
GsuI CTGGAG 2 cut(s) 577, 1325
HaeII RGCGCY 1 cut(s) 259
HaeIII GGCC 3 cut(s) 503, 718, 758
HgaI GACGC 1 cut(s) 345
HhaI GCGC 3 cut(s) 195, 258, 676
Hin1I GRCGYC 1 cut(s) 356
Hin1II CATG 6 cut(s) 107, 304, 485, 566, 745, 757
Hin6I GCGC 3 cut(s) 193, 256, 674
HinP1I GCGC 3 cut(s) 193, 256, 674
HindIII AAGCTT 2 cut(s) 530, 1094
HinfI GANTC 6 cut(s) 339, 595, 1163, 1202, 1255, 1415
HphI GGTGA 3 cut(s) 166, 415, 1410
Hpy166II GTNNAC 3 cut(s) 174, 406, 1074
Hpy188I TCNGA 5 cut(s) 32, 156, 297, 642, 954
Hpy188III TCNNGA 7 cut(s) 217, 274, 311, 487, 1114, 1220, 1342
Hpy8I GTNNAC 3 cut(s) 174, 406, 1074
Hpy99I CGWCG 1 cut(s) 1034
HpyCH4III ACNGT 3 cut(s) 388, 1154, 1325
HpyCH4IV ACGT 2 cut(s) 396, 1086
HpyCH4V TGCA 5 cut(s) 584, 1106, 1271, 1321, 1412
HpyF3I CTNAG 6 cut(s) 227, 296, 476, 660, 821, 1374
HpySE526I ACGT 2 cut(s) 396, 1086
Hsp92I GRCGYC 1 cut(s) 356
Hsp92II CATG 6 cut(s) 107, 304, 485, 566, 745, 757
HspAI GCGC 3 cut(s) 193, 256, 674
Kpn2I TCCGGA 1 cut(s) 1219
Ksp22I TGATCA 1 cut(s) 1110
KspI CCGCGG 2 cut(s) 801, 1054
LmnI GCTCC 7 cut(s) 181, 236, 454, 554, 558, 931, 1229
Lsp1109I GCAGC 6 cut(s) 207, 391, 816, 1002, 1090, 1396
LweI GCATC 3 cut(s) 180, 1090, 1272
MaeI CTAG 1 cut(s) 1182
MaeII ACGT 2 cut(s) 396, 1086
MaeIII GTNAC 3 cut(s) 701, 1000, 1154
MbiI CCGCTC 1 cut(s) 184
MboII GAAGA 4 cut(s) 628, 706, 973, 1391
MflI RGATCY 1 cut(s) 949
MhlI GDGCHC 2 cut(s) 233, 579
MlsI TGGCCA 1 cut(s) 758
MluCI AATT 3 cut(s) 1021, 1142, 1224
MluNI TGGCCA 1 cut(s) 758
MlyI GAGTC 3 cut(s) 348, 589, 1249
Mox20I TGGCCA 1 cut(s) 758
MroI TCCGGA 1 cut(s) 1219
MscI TGGCCA 1 cut(s) 758
MseI TTAA 3 cut(s) 50, 804, 1248
Msp20I TGGCCA 1 cut(s) 758
MspA1I CMGCKG 2 cut(s) 800, 1053
MspR9I CCNGG 6 cut(s) 178, 361, 723, 998, 1012, 1300
MvaI CCWGG 1 cut(s) 998
MvnI CGCG 3 cut(s) 676, 800, 1053
NciI CCSGG 5 cut(s) 178, 361, 723, 1012, 1300
NcoI CCATGG 1 cut(s) 753
NlaIII CATG 6 cut(s) 107, 304, 485, 566, 745, 757
NlaIV GGNNCC 4 cut(s) 469, 550, 560, 951
NsbI TGCGCA 1 cut(s) 194
NspI RCATGY 1 cut(s) 107
NspV TTCGAA 1 cut(s) 97
PaeR7I CTCGAG 1 cut(s) 788
PfeI GAWTC 3 cut(s) 1163, 1202, 1415
Pfl23II CGTACG 1 cut(s) 393
PflFI GACNNNGTC 1 cut(s) 629
PfoI TCCNGGA 1 cut(s) 359
Ple19I CGATCG 1 cut(s) 42
PleI GAGTC 3 cut(s) 347, 589, 1249
PpsI GAGTC 3 cut(s) 347, 589, 1249
Ppu21I YACGTR 1 cut(s) 1087
Psp124BI GAGCTC 1 cut(s) 233
Psp6I CCWGG 1 cut(s) 996
PspEI GGTNACC 1 cut(s) 701
PspGI CCWGG 1 cut(s) 996
PspLI CGTACG 1 cut(s) 393
PspN4I GGNNCC 4 cut(s) 469, 550, 560, 951
PspPI GGNCC 2 cut(s) 467, 716
PspXI VCTCGAGB 1 cut(s) 788
PstI CTGCAG 1 cut(s) 1414
PsuI RGATCY 1 cut(s) 949
PsyI GACNNNGTC 1 cut(s) 629
PvuI CGATCG 1 cut(s) 42
RsaI GTAC 5 cut(s) 80, 116, 368, 395, 422
RsaNI GTAC 5 cut(s) 79, 115, 367, 394, 421
SacI GAGCTC 1 cut(s) 233
SacII CCGCGG 2 cut(s) 801, 1054
SaqAI TTAA 3 cut(s) 50, 804, 1248
Sau96I GGNCC 2 cut(s) 467, 716
ScaI AGTACT 2 cut(s) 80, 116
SchI GAGTC 3 cut(s) 348, 589, 1249
ScrFI CCNGG 6 cut(s) 178, 361, 723, 998, 1012, 1300
SduI GDGCHC 2 cut(s) 233, 579
SfaNI GCATC 3 cut(s) 180, 1090, 1272
SfcI CTRYAG 1 cut(s) 1410
Sfr274I CTCGAG 1 cut(s) 788
Sfr303I CCGCGG 2 cut(s) 801, 1054
SfuI TTCGAA 1 cut(s) 97
SgrBI CCGCGG 2 cut(s) 801, 1054
SinI GGWCC 1 cut(s) 467
SlaI CTCGAG 1 cut(s) 788
SmlI CTYRAG 3 cut(s) 260, 788, 1193
SmoI CTYRAG 3 cut(s) 260, 788, 1193
Sse9I AATT 3 cut(s) 1021, 1142, 1224
SspMI CTAG 1 cut(s) 1182
SstI GAGCTC 1 cut(s) 233
StyD4I CCNGG 6 cut(s) 176, 359, 721, 996, 1010, 1298
StyI CCWWGG 1 cut(s) 753
TaaI ACNGT 3 cut(s) 388, 1154, 1325
TaiI ACGT 2 cut(s) 399, 1089
TasI AATT 3 cut(s) 1021, 1142, 1224
TatI WGTACW 3 cut(s) 78, 114, 366
TauI GCSGC 4 cut(s) 187, 721, 752, 1053
TfiI GAWTC 3 cut(s) 1163, 1202, 1415
Tru1I TTAA 3 cut(s) 50, 804, 1248
Tru9I TTAA 3 cut(s) 50, 804, 1248
TscAI CASTG 1 cut(s) 560
TseI GCWGC 6 cut(s) 195, 379, 829, 1015, 1103, 1409
TspDTI ATGAA 1 cut(s) 1015
TspRI CASTG 1 cut(s) 560
Tth111I GACNNNGTC 1 cut(s) 629
VpaK11BI GGWCC 1 cut(s) 467
XagI CCTNNNNNAGG 1 cut(s) 491
XapI RAATTY 1 cut(s) 1021
XceI RCATGY 1 cut(s) 107
XhoI CTCGAG 1 cut(s) 788
XspI CTAG 1 cut(s) 1182
ZrmI AGTACT 2 cut(s) 80, 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.