f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 94 - 363 | 1e-35 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 700 |
| Acc36I | ACCTGC | 2 cut(s) | 700, 1051 |
| Acc65I | GGTACC | 2 cut(s) | 16, 1141 |
| AccB1I | GGYRCC | 2 cut(s) | 16, 1141 |
| AccI | GTMKAC | 2 cut(s) | 225, 609 |
| AclWI | GGATC | 2 cut(s) | 939, 1069 |
| AfaI | GTAC | 5 cut(s) | 18, 463, 722, 1041, 1143 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 271, 737, 1152 |
| AgsI | TTSAA | 3 cut(s) | 394, 403, 451 |
| AjnI | CCWGG | 2 cut(s) | 270, 988 |
| AleI | CACNNNNGTG | 1 cut(s) | 1080 |
| AluBI | AGCT | 5 cut(s) | 9, 43, 93, 337, 951 |
| AluI | AGCT | 5 cut(s) | 9, 43, 93, 337, 951 |
| Alw21I | GWGCWC | 3 cut(s) | 11, 29, 45 |
| Alw26I | GTCTC | 2 cut(s) | 214, 976 |
| Alw44I | GTGCAC | 1 cut(s) | 25 |
| AlwI | GGATC | 2 cut(s) | 939, 1069 |
| ApaLI | GTGCAC | 1 cut(s) | 25 |
| ApeKI | GCWGC | 1 cut(s) | 99 |
| Asp718I | GGTACC | 2 cut(s) | 16, 1141 |
| AspLEI | GCGC | 1 cut(s) | 120 |
| AspS9I | GGNCC | 1 cut(s) | 1034 |
| AsuC2I | CCSGG | 1 cut(s) | 297 |
| AsuHPI | GGTGA | 2 cut(s) | 316, 788 |
| AvaII | GGWCC | 1 cut(s) | 1034 |
| BaeGI | GKGCMC | 1 cut(s) | 29 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 8, 41 |
| BanI | GGYRCC | 2 cut(s) | 16, 1141 |
| BanII | GRGCYC | 2 cut(s) | 11, 45 |
| Bbv12I | GWGCWC | 3 cut(s) | 11, 29, 45 |
| BbvI | GCAGC | 1 cut(s) | 86 |
| BccI | CCATC | 4 cut(s) | 329, 848, 950, 1094 |
| BceAI | ACGGC | 2 cut(s) | 191, 715 |
| BciT130I | CCWGG | 2 cut(s) | 272, 990 |
| BclI | TGATCA | 1 cut(s) | 511 |
| BcnI | CCSGG | 1 cut(s) | 297 |
| BcoDI | GTCTC | 2 cut(s) | 214, 976 |
| BfaI | CTAG | 1 cut(s) | 507 |
| BfoI | RGCGCY | 1 cut(s) | 121 |
| BfuAI | ACCTGC | 2 cut(s) | 700, 1051 |
| BisI | GCNGC | 3 cut(s) | 100, 204, 728 |
| BlsI | GCNGC | 3 cut(s) | 101, 205, 729 |
| BmcAI | AGTACT | 1 cut(s) | 722 |
| Bme1390I | CCNGG | 3 cut(s) | 272, 297, 990 |
| Bme18I | GGWCC | 1 cut(s) | 1034 |
| BmgT120I | GGNCC | 1 cut(s) | 1034 |
| BmiI | GGNNCC | 2 cut(s) | 18, 1143 |
| BmrFI | CCNGG | 3 cut(s) | 272, 297, 990 |
| BmsI | GCATC | 2 cut(s) | 87, 364 |
| BoxI | GACNNNNGTC | 2 cut(s) | 221, 1032 |
| BpmI | CTGGAG | 2 cut(s) | 218, 1011 |
| BpuMI | CCSGG | 1 cut(s) | 297 |
| BsaBI | GATNNNNATC | 1 cut(s) | 356 |
| BsaI | GGTCTC | 1 cut(s) | 976 |
| BsaJI | CCNNGG | 4 cut(s) | 12, 20, 36, 978 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 326, 356 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 271, 737, 1152 |
| Bse118I | RCCGGY | 1 cut(s) | 248 |
| Bse1I | ACTGG | 1 cut(s) | 235 |
| Bse3DI | GCAATG | 1 cut(s) | 711 |
| Bse8I | GATNNNNATC | 1 cut(s) | 356 |
| BseBI | CCWGG | 2 cut(s) | 272, 990 |
| BseDI | CCNNGG | 4 cut(s) | 12, 20, 36, 978 |
| BseGI | GGATG | 4 cut(s) | 357, 379, 595, 895 |
| BseJI | GATNNNNATC | 1 cut(s) | 356 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 271, 737, 1152 |
| BseMI | GCAATG | 1 cut(s) | 711 |
| BseMII | CTCAG | 5 cut(s) | 103, 456, 839, 1011, 1142 |
| BseNI | ACTGG | 1 cut(s) | 235 |
| BseRI | GAGGAG | 5 cut(s) | 123, 144, 147, 542, 844 |
| BseSI | GKGCMC | 1 cut(s) | 29 |
| BseXI | GCAGC | 1 cut(s) | 86 |
| BshNI | GGYRCC | 2 cut(s) | 16, 1141 |
| BsiHKAI | GWGCWC | 3 cut(s) | 11, 29, 45 |
| BsiSI | CCGG | 2 cut(s) | 249, 297 |
| BslFI | GGGAC | 4 cut(s) | 223, 274, 694, 916 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 271, 737, 1152 |
| BsmAI | GTCTC | 2 cut(s) | 214, 976 |
| BsmBI | CGTCTC | 1 cut(s) | 214 |
| BsmFI | GGGAC | 4 cut(s) | 223, 274, 694, 916 |
| Bso31I | GGTCTC | 1 cut(s) | 976 |
| Bsp1286I | GDGCHC | 3 cut(s) | 11, 29, 45 |
| Bsp143I | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| Bsp19I | CCATGG | 1 cut(s) | 20 |
| BspCNI | CTCAG | 5 cut(s) | 102, 457, 838, 1012, 1141 |
| BspLI | GGNNCC | 2 cut(s) | 18, 1143 |
| BspMI | ACCTGC | 2 cut(s) | 700, 1051 |
| BspPI | GGATC | 2 cut(s) | 939, 1069 |
| BspT107I | GGYRCC | 2 cut(s) | 16, 1141 |
| BspTNI | GGTCTC | 1 cut(s) | 976 |
| BsrDI | GCAATG | 1 cut(s) | 711 |
| BsrFI | RCCGGY | 1 cut(s) | 248 |
| BsrI | ACTGG | 1 cut(s) | 235 |
| BssAI | RCCGGY | 1 cut(s) | 248 |
| BssECI | CCNNGG | 4 cut(s) | 12, 20, 36, 978 |
| BssMI | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| BssT1I | CCWWGG | 4 cut(s) | 12, 20, 36, 978 |
| Bst2UI | CCWGG | 2 cut(s) | 272, 990 |
| Bst4CI | ACNGT | 3 cut(s) | 223, 399, 1079 |
| BstC8I | GCNNGC | 2 cut(s) | 250, 311 |
| BstDEI | CTNAG | 5 cut(s) | 89, 465, 825, 1020, 1128 |
| BstDSI | CCRYGG | 1 cut(s) | 20 |
| BstF5I | GGATG | 4 cut(s) | 357, 379, 595, 895 |
| BstH2I | RGCGCY | 1 cut(s) | 121 |
| BstHHI | GCGC | 1 cut(s) | 120 |
| BstKTI | GATC | 7 cut(s) | 57, 360, 514, 637, 781, 934, 1064 |
| BstMAI | GTCTC | 2 cut(s) | 214, 976 |
| BstMBI | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 99, 105, 306, 1119 |
| BstNI | CCWGG | 2 cut(s) | 272, 990 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 221, 1032 |
| BstSCI | CCNGG | 3 cut(s) | 270, 295, 988 |
| BstSLI | GKGCMC | 1 cut(s) | 29 |
| BstV1I | GCAGC | 1 cut(s) | 86 |
| BtgI | CCRYGG | 1 cut(s) | 20 |
| BtgZI | GCGATG | 1 cut(s) | 229 |
| BtsCI | GGATG | 4 cut(s) | 357, 379, 595, 895 |
| BtsIMutI | CAGTG | 2 cut(s) | 662, 1075 |
| BveI | ACCTGC | 2 cut(s) | 700, 1051 |
| Cac8I | GCNNGC | 2 cut(s) | 250, 311 |
| CfoI | GCGC | 1 cut(s) | 120 |
| Cfr10I | RCCGGY | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 1034 |
| CseI | GACGC | 1 cut(s) | 91 |
| Csp6I | GTAC | 5 cut(s) | 17, 462, 721, 1040, 1142 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 693, 728 |
| CviAII | CATG | 2 cut(s) | 21, 785 |
| CviJI | RGCY | 9 cut(s) | 9, 43, 93, 196, 337, 886, 951, 1097, 1156 |
| CviKI_1 | RGCY | 9 cut(s) | 9, 43, 93, 196, 337, 886, 951, 1097, 1156 |
| CviQI | GTAC | 5 cut(s) | 17, 462, 721, 1040, 1142 |
| DdeI | CTNAG | 5 cut(s) | 89, 465, 825, 1020, 1128 |
| DpnI | GATC | 7 cut(s) | 56, 359, 513, 636, 780, 933, 1063 |
| DpnII | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| EciI | GGCGGA | 3 cut(s) | 112, 190, 881 |
| Ecl136II | GAGCTC | 2 cut(s) | 9, 43 |
| Eco130I | CCWWGG | 4 cut(s) | 12, 20, 36, 978 |
| Eco24I | GRGCYC | 2 cut(s) | 11, 45 |
| Eco31I | GGTCTC | 1 cut(s) | 976 |
| Eco32I | GATATC | 1 cut(s) | 687 |
| Eco47I | GGWCC | 1 cut(s) | 1034 |
| Eco53kI | GAGCTC | 2 cut(s) | 9, 43 |
| EcoICRI | GAGCTC | 2 cut(s) | 9, 43 |
| EcoRII | CCWGG | 2 cut(s) | 270, 988 |
| EcoRV | GATATC | 1 cut(s) | 687 |
| EcoT14I | CCWWGG | 4 cut(s) | 12, 20, 36, 978 |
| EcoT38I | GRGCYC | 2 cut(s) | 11, 45 |
| ErhI | CCWWGG | 4 cut(s) | 12, 20, 36, 978 |
| Esp3I | CGTCTC | 1 cut(s) | 214 |
| FaeI | CATG | 2 cut(s) | 24, 788 |
| FaqI | GGGAC | 4 cut(s) | 223, 274, 694, 916 |
| FatI | CATG | 2 cut(s) | 20, 784 |
| FauI | CCCGC | 1 cut(s) | 83 |
| FbaI | TGATCA | 1 cut(s) | 511 |
| FblI | GTMKAC | 2 cut(s) | 225, 609 |
| Fnu4HI | GCNGC | 3 cut(s) | 100, 204, 728 |
| FokI | GGATG | 4 cut(s) | 364, 386, 602, 902 |
| FriOI | GRGCYC | 2 cut(s) | 11, 45 |
| Fsp4HI | GCNGC | 3 cut(s) | 100, 204, 728 |
| FspBI | CTAG | 1 cut(s) | 507 |
| GlaI | GCGC | 1 cut(s) | 119 |
| GluI | GCNGC | 3 cut(s) | 100, 204, 728 |
| GsuI | CTGGAG | 2 cut(s) | 218, 1011 |
| HaeII | RGCGCY | 1 cut(s) | 121 |
| HapII | CCGG | 2 cut(s) | 249, 297 |
| HgaI | GACGC | 1 cut(s) | 91 |
| HhaI | GCGC | 1 cut(s) | 120 |
| Hin1II | CATG | 2 cut(s) | 24, 788 |
| Hin6I | GCGC | 1 cut(s) | 118 |
| HinP1I | GCGC | 1 cut(s) | 118 |
| HincII | GTYRAC | 1 cut(s) | 610 |
| HindII | GTYRAC | 1 cut(s) | 610 |
| HinfI | GANTC | 3 cut(s) | 257, 601, 1124 |
| HpaII | CCGG | 2 cut(s) | 249, 297 |
| HphI | GGTGA | 2 cut(s) | 316, 788 |
| Hpy166II | GTNNAC | 5 cut(s) | 27, 226, 487, 610, 1017 |
| Hpy188I | TCNGA | 2 cut(s) | 59, 828 |
| Hpy188III | TCNNGA | 2 cut(s) | 176, 851 |
| Hpy8I | GTNNAC | 5 cut(s) | 27, 226, 487, 610, 1017 |
| Hpy99I | CGWCG | 4 cut(s) | 86, 194, 257, 614 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4III | ACNGT | 3 cut(s) | 223, 399, 1079 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 27, 709, 1008 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 99, 105, 306, 1119 |
| HpyF3I | CTNAG | 5 cut(s) | 89, 465, 825, 1020, 1128 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Hsp92II | CATG | 2 cut(s) | 24, 788 |
| HspAI | GCGC | 1 cut(s) | 118 |
| KpnI | GGTACC | 2 cut(s) | 20, 1145 |
| KroI | GCCGGC | 1 cut(s) | 248 |
| KroNI | GCCGGC | 1 cut(s) | 250 |
| Ksp22I | TGATCA | 1 cut(s) | 511 |
| Kzo9I | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| LmnI | GCTCC | 5 cut(s) | 14, 40, 125, 267, 334 |
| Lsp1109I | GCAGC | 1 cut(s) | 86 |
| LweI | GCATC | 2 cut(s) | 87, 364 |
| MaeI | CTAG | 1 cut(s) | 507 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MaeIII | GTNAC | 2 cut(s) | 916, 1073 |
| MalI | GATC | 7 cut(s) | 56, 359, 513, 636, 780, 933, 1063 |
| MboI | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| MboII | GAAGA | 1 cut(s) | 773 |
| MfeI | CAATTG | 1 cut(s) | 328 |
| MhlI | GDGCHC | 3 cut(s) | 11, 29, 45 |
| MluCI | AATT | 6 cut(s) | 328, 625, 838, 1003, 1050, 1150 |
| MlyI | GAGTC | 1 cut(s) | 251 |
| MmeI | TCCRAC | 2 cut(s) | 390, 578 |
| MreI | CGCCGGCG | 1 cut(s) | 248 |
| MroNI | GCCGGC | 1 cut(s) | 248 |
| MseI | TTAA | 4 cut(s) | 417, 837, 873, 912 |
| MslI | CAYNNNNRTG | 2 cut(s) | 852, 1080 |
| MspA1I | CMGCKG | 1 cut(s) | 99 |
| MspI | CCGG | 2 cut(s) | 249, 297 |
| MspR9I | CCNGG | 3 cut(s) | 272, 297, 990 |
| MunI | CAATTG | 1 cut(s) | 328 |
| MvaI | CCWGG | 2 cut(s) | 272, 990 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 99, 105, 306, 1119 |
| NaeI | GCCGGC | 1 cut(s) | 250 |
| NciI | CCSGG | 1 cut(s) | 297 |
| NcoI | CCATGG | 1 cut(s) | 20 |
| NdeII | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| NgoMIV | GCCGGC | 1 cut(s) | 248 |
| NlaIII | CATG | 2 cut(s) | 24, 788 |
| NlaIV | GGNNCC | 2 cut(s) | 18, 1143 |
| NmuCI | GTSAC | 2 cut(s) | 916, 1073 |
| OliI | CACNNNNGTG | 1 cut(s) | 1080 |
| PaqCI | CACCTGC | 1 cut(s) | 700 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 252, 366, 1078 |
| PdiI | GCCGGC | 1 cut(s) | 250 |
| PfeI | GAWTC | 2 cut(s) | 601, 1124 |
| PfoI | TCCNGGA | 1 cut(s) | 988 |
| PkrI | GCNGC | 3 cut(s) | 101, 205, 729 |
| PleI | GAGTC | 1 cut(s) | 251 |
| PpsI | GAGTC | 1 cut(s) | 251 |
| PshAI | GACNNNNGTC | 2 cut(s) | 221, 1032 |
| Psp124BI | GAGCTC | 2 cut(s) | 11, 45 |
| Psp6I | CCWGG | 2 cut(s) | 270, 988 |
| PspGI | CCWGG | 2 cut(s) | 270, 988 |
| PspN4I | GGNNCC | 2 cut(s) | 18, 1143 |
| PspPI | GGNCC | 1 cut(s) | 1034 |
| RsaI | GTAC | 5 cut(s) | 18, 463, 722, 1041, 1143 |
| RsaNI | GTAC | 5 cut(s) | 17, 462, 721, 1040, 1142 |
| RseI | CAYNNNNRTG | 2 cut(s) | 852, 1080 |
| SacI | GAGCTC | 2 cut(s) | 11, 45 |
| SalI | GTCGAC | 1 cut(s) | 608 |
| SaqAI | TTAA | 4 cut(s) | 417, 837, 873, 912 |
| SatI | GCNGC | 3 cut(s) | 100, 204, 728 |
| Sau3AI | GATC | 7 cut(s) | 54, 357, 511, 634, 778, 931, 1061 |
| Sau96I | GGNCC | 1 cut(s) | 1034 |
| ScaI | AGTACT | 1 cut(s) | 722 |
| SchI | GAGTC | 1 cut(s) | 251 |
| ScrFI | CCNGG | 3 cut(s) | 272, 297, 990 |
| SduI | GDGCHC | 3 cut(s) | 11, 29, 45 |
| SfaNI | GCATC | 2 cut(s) | 87, 364 |
| SgrAI | CRCCGGYG | 1 cut(s) | 248 |
| SinI | GGWCC | 1 cut(s) | 1034 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 852, 1080 |
| Sse9I | AATT | 6 cut(s) | 328, 625, 838, 1003, 1050, 1150 |
| SspMI | CTAG | 1 cut(s) | 507 |
| SstI | GAGCTC | 2 cut(s) | 11, 45 |
| StyD4I | CCNGG | 3 cut(s) | 270, 295, 988 |
| StyI | CCWWGG | 4 cut(s) | 12, 20, 36, 978 |
| TaaI | ACNGT | 3 cut(s) | 223, 399, 1079 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TasI | AATT | 6 cut(s) | 328, 625, 838, 1003, 1050, 1150 |
| TatI | WGTACW | 2 cut(s) | 461, 720 |
| TauI | GCSGC | 2 cut(s) | 206, 730 |
| TfiI | GAWTC | 2 cut(s) | 601, 1124 |
| Tru1I | TTAA | 4 cut(s) | 417, 837, 873, 912 |
| Tru9I | TTAA | 4 cut(s) | 417, 837, 873, 912 |
| TscAI | CASTG | 2 cut(s) | 662, 1082 |
| TseFI | GTSAC | 2 cut(s) | 916, 1073 |
| TseI | GCWGC | 1 cut(s) | 99 |
| Tsp45I | GTSAC | 2 cut(s) | 916, 1073 |
| TspDTI | ATGAA | 1 cut(s) | 773 |
| TspRI | CASTG | 2 cut(s) | 662, 1082 |
| VneI | GTGCAC | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 1 cut(s) | 1034 |
| XmiI | GTMKAC | 2 cut(s) | 225, 609 |
| XspI | CTAG | 1 cut(s) | 507 |
| ZrmI | AGTACT | 1 cut(s) | 722 |