f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 91 - 341 | 4.1e-40 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 676 |
| Acc16I | TGCGCA | 1 cut(s) | 726 |
| Acc36I | ACCTGC | 2 cut(s) | 331, 676 |
| AccI | GTMKAC | 3 cut(s) | 81, 222, 768 |
| AccII | CGCG | 1 cut(s) | 78 |
| AccIII | TCCGGA | 1 cut(s) | 1104 |
| AclWI | GGATC | 1 cut(s) | 906 |
| AcsI | RAATTY | 2 cut(s) | 62, 374 |
| AfaI | GTAC | 2 cut(s) | 623, 698 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 182, 713, 714, 1119 |
| AgsI | TTSAA | 2 cut(s) | 379, 942 |
| AjiI | CACGTC | 2 cut(s) | 829, 873 |
| AjnI | CCWGG | 2 cut(s) | 165, 955 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 981, 1013 |
| AleI | CACNNNNGTG | 1 cut(s) | 1047 |
| AluBI | AGCT | 5 cut(s) | 16, 43, 918, 929, 1013 |
| AluI | AGCT | 5 cut(s) | 16, 43, 918, 929, 1013 |
| Alw21I | GWGCWC | 1 cut(s) | 45 |
| Alw26I | GTCTC | 2 cut(s) | 211, 942 |
| AlwI | GGATC | 1 cut(s) | 906 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 105, 238 |
| Aor13HI | TCCGGA | 1 cut(s) | 1104 |
| AoxI | GGCC | 2 cut(s) | 8, 294 |
| ApeKI | GCWGC | 2 cut(s) | 99, 268 |
| ApoI | RAATTY | 2 cut(s) | 62, 374 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 63, 95 |
| AspLEI | GCGC | 2 cut(s) | 120, 727 |
| AspS9I | GGNCC | 2 cut(s) | 9, 1001 |
| AsuHPI | GGTGA | 7 cut(s) | 292, 322, 421, 700, 764, 973, 1034 |
| AvaII | GGWCC | 1 cut(s) | 1001 |
| BanII | GRGCYC | 1 cut(s) | 45 |
| Bbv12I | GWGCWC | 1 cut(s) | 45 |
| BbvI | GCAGC | 2 cut(s) | 111, 255 |
| BccI | CCATC | 4 cut(s) | 815, 917, 1036, 1061 |
| BceAI | ACGGC | 3 cut(s) | 110, 188, 256 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 599, 633 |
| BciT130I | CCWGG | 2 cut(s) | 167, 957 |
| BclI | TGATCA | 1 cut(s) | 487 |
| BcoDI | GTCTC | 2 cut(s) | 211, 942 |
| BfaI | CTAG | 1 cut(s) | 137 |
| BfmI | CTRYAG | 1 cut(s) | 230 |
| BfoI | RGCGCY | 1 cut(s) | 121 |
| BfuAI | ACCTGC | 2 cut(s) | 331, 676 |
| BisI | GCNGC | 6 cut(s) | 100, 201, 247, 269, 304, 704 |
| BlsI | GCNGC | 6 cut(s) | 101, 202, 248, 270, 305, 705 |
| BmcAI | AGTACT | 1 cut(s) | 698 |
| Bme1390I | CCNGG | 2 cut(s) | 167, 957 |
| Bme18I | GGWCC | 1 cut(s) | 1001 |
| BmgBI | CACGTC | 2 cut(s) | 829, 873 |
| BmgT120I | GGNCC | 2 cut(s) | 9, 1001 |
| BmrFI | CCNGG | 2 cut(s) | 167, 957 |
| BoxI | GACNNNNGTC | 3 cut(s) | 218, 875, 999 |
| BsaJI | CCNNGG | 3 cut(s) | 165, 166, 956 |
| BsaWI | WCCGGW | 1 cut(s) | 1104 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 182, 713, 714, 1119 |
| Bse118I | RCCGGY | 1 cut(s) | 182 |
| Bse1I | ACTGG | 1 cut(s) | 341 |
| Bse3DI | GCAATG | 1 cut(s) | 615 |
| BseAI | TCCGGA | 1 cut(s) | 1104 |
| BseBI | CCWGG | 2 cut(s) | 167, 957 |
| BseDI | CCNNGG | 3 cut(s) | 165, 166, 956 |
| BseGI | GGATG | 6 cut(s) | 265, 322, 571, 862, 1028, 1072 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 182, 713, 714, 1119 |
| BseMI | GCAATG | 1 cut(s) | 615 |
| BseMII | CTCAG | 2 cut(s) | 806, 1109 |
| BseNI | ACTGG | 1 cut(s) | 341 |
| BseRI | GAGGAG | 4 cut(s) | 144, 147, 305, 549 |
| BseXI | GCAGC | 2 cut(s) | 111, 255 |
| Bsh1236I | CGCG | 1 cut(s) | 78 |
| Bsh1285I | CGRYCG | 1 cut(s) | 147 |
| BshFI | GGCC | 2 cut(s) | 10, 296 |
| BsiEI | CGRYCG | 1 cut(s) | 147 |
| BsiHKAI | GWGCWC | 1 cut(s) | 45 |
| BsiSI | CCGG | 2 cut(s) | 183, 1105 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 182, 713, 714, 1119 |
| BsmAI | GTCTC | 2 cut(s) | 211, 942 |
| BsmBI | CGTCTC | 1 cut(s) | 211 |
| BsmI | GAATGC | 1 cut(s) | 1029 |
| BsnI | GGCC | 2 cut(s) | 10, 296 |
| Bsp1286I | GDGCHC | 1 cut(s) | 45 |
| Bsp13I | TCCGGA | 1 cut(s) | 1104 |
| Bsp143I | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| BspANI | GGCC | 2 cut(s) | 10, 296 |
| BspCNI | CTCAG | 2 cut(s) | 805, 1108 |
| BspEI | TCCGGA | 1 cut(s) | 1104 |
| BspFNI | CGCG | 1 cut(s) | 78 |
| BspMAI | CTGCAG | 1 cut(s) | 234 |
| BspMI | ACCTGC | 2 cut(s) | 331, 676 |
| BspPI | GGATC | 1 cut(s) | 906 |
| BspQI | GCTCTTC | 1 cut(s) | 183 |
| BsrDI | GCAATG | 1 cut(s) | 615 |
| BsrFI | RCCGGY | 1 cut(s) | 182 |
| BsrI | ACTGG | 1 cut(s) | 341 |
| BssAI | RCCGGY | 1 cut(s) | 182 |
| BssECI | CCNNGG | 3 cut(s) | 165, 166, 956 |
| BssMI | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| Bst2UI | CCWGG | 2 cut(s) | 167, 957 |
| Bst4CI | ACNGT | 4 cut(s) | 220, 367, 417, 1046 |
| Bst6I | CTCTTC | 1 cut(s) | 183 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 3 cut(s) | 184, 230, 483 |
| BstDEI | CTNAG | 2 cut(s) | 792, 1095 |
| BstF5I | GGATG | 6 cut(s) | 265, 322, 571, 862, 1028, 1072 |
| BstFNI | CGCG | 1 cut(s) | 78 |
| BstH2I | RGCGCY | 1 cut(s) | 121 |
| BstHHI | GCGC | 2 cut(s) | 120, 727 |
| BstKTI | GATC | 9 cut(s) | 31, 57, 147, 243, 330, 490, 613, 757, 901 |
| BstMAI | GTCTC | 2 cut(s) | 211, 942 |
| BstMBI | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| BstMCI | CGRYCG | 1 cut(s) | 147 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 105, 1086 |
| BstNI | CCWGG | 2 cut(s) | 167, 957 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 218, 875, 999 |
| BstSCI | CCNGG | 2 cut(s) | 165, 955 |
| BstSFI | CTRYAG | 1 cut(s) | 230 |
| BstUI | CGCG | 1 cut(s) | 78 |
| BstV1I | GCAGC | 2 cut(s) | 111, 255 |
| BsuRI | GGCC | 2 cut(s) | 10, 296 |
| BtrI | CACGTC | 2 cut(s) | 829, 873 |
| BtsCI | GGATG | 6 cut(s) | 265, 322, 571, 862, 1028, 1072 |
| BtsIMutI | CAGTG | 2 cut(s) | 638, 984 |
| BveI | ACCTGC | 2 cut(s) | 331, 676 |
| Cac8I | GCNNGC | 3 cut(s) | 184, 230, 483 |
| CaiI | CAGNNNCTG | 2 cut(s) | 105, 238 |
| CfoI | GCGC | 2 cut(s) | 120, 727 |
| Cfr10I | RCCGGY | 1 cut(s) | 182 |
| Cfr13I | GGNCC | 2 cut(s) | 9, 1001 |
| CseI | GACGC | 3 cut(s) | 67, 91, 302 |
| Csp6I | GTAC | 2 cut(s) | 622, 697 |
| CviAII | CATG | 1 cut(s) | 1075 |
| CviQI | GTAC | 2 cut(s) | 622, 697 |
| DdeI | CTNAG | 2 cut(s) | 792, 1095 |
| DpnI | GATC | 9 cut(s) | 30, 56, 146, 242, 329, 489, 612, 756, 900 |
| DpnII | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| Eam1104I | CTCTTC | 1 cut(s) | 183 |
| EarI | CTCTTC | 1 cut(s) | 183 |
| EciI | GGCGGA | 1 cut(s) | 112 |
| Ecl136II | GAGCTC | 1 cut(s) | 43 |
| Eco24I | GRGCYC | 1 cut(s) | 45 |
| Eco32I | GATATC | 1 cut(s) | 663 |
| Eco47I | GGWCC | 1 cut(s) | 1001 |
| Eco53kI | GAGCTC | 1 cut(s) | 43 |
| EcoICRI | GAGCTC | 1 cut(s) | 43 |
| EcoRI | GAATTC | 1 cut(s) | 374 |
| EcoRII | CCWGG | 2 cut(s) | 165, 955 |
| EcoRV | GATATC | 1 cut(s) | 663 |
| EcoT38I | GRGCYC | 1 cut(s) | 45 |
| Esp3I | CGTCTC | 1 cut(s) | 211 |
| FaeI | CATG | 1 cut(s) | 1078 |
| FatI | CATG | 1 cut(s) | 1074 |
| FauI | CCCGC | 2 cut(s) | 83, 205 |
| FbaI | TGATCA | 1 cut(s) | 487 |
| FblI | GTMKAC | 3 cut(s) | 81, 222, 768 |
| Fnu4HI | GCNGC | 6 cut(s) | 100, 201, 247, 269, 304, 704 |
| FokI | GGATG | 6 cut(s) | 272, 309, 578, 869, 1015, 1079 |
| FriOI | GRGCYC | 1 cut(s) | 45 |
| Fsp4HI | GCNGC | 6 cut(s) | 100, 201, 247, 269, 304, 704 |
| FspAI | RTGCGCAY | 1 cut(s) | 726 |
| FspBI | CTAG | 1 cut(s) | 137 |
| FspI | TGCGCA | 1 cut(s) | 726 |
| GlaI | GCGC | 2 cut(s) | 119, 726 |
| GluI | GCNGC | 6 cut(s) | 100, 201, 247, 269, 304, 704 |
| HaeII | RGCGCY | 1 cut(s) | 121 |
| HaeIII | GGCC | 2 cut(s) | 10, 296 |
| HapII | CCGG | 2 cut(s) | 183, 1105 |
| HgaI | GACGC | 3 cut(s) | 67, 91, 302 |
| HhaI | GCGC | 2 cut(s) | 120, 727 |
| Hin1II | CATG | 1 cut(s) | 1078 |
| Hin6I | GCGC | 2 cut(s) | 118, 725 |
| HinP1I | GCGC | 2 cut(s) | 118, 725 |
| HincII | GTYRAC | 2 cut(s) | 82, 769 |
| HindII | GTYRAC | 2 cut(s) | 82, 769 |
| HinfI | GANTC | 6 cut(s) | 93, 149, 171, 263, 577, 691 |
| HpaII | CCGG | 2 cut(s) | 183, 1105 |
| HphI | GGTGA | 7 cut(s) | 292, 322, 421, 700, 764, 973, 1034 |
| Hpy166II | GTNNAC | 6 cut(s) | 82, 223, 463, 586, 769, 984 |
| Hpy188I | TCNGA | 7 cut(s) | 59, 92, 259, 327, 363, 426, 795 |
| Hpy188III | TCNNGA | 3 cut(s) | 137, 1032, 1105 |
| Hpy8I | GTNNAC | 6 cut(s) | 82, 223, 463, 586, 769, 984 |
| Hpy99I | CGWCG | 5 cut(s) | 83, 86, 830, 874, 1050 |
| HpyAV | CCTTC | 2 cut(s) | 245, 958 |
| HpyCH4III | ACNGT | 4 cut(s) | 220, 367, 417, 1046 |
| HpyCH4IV | ACGT | 4 cut(s) | 84, 800, 828, 872 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 232, 685, 975 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 105, 1086 |
| HpyF3I | CTNAG | 2 cut(s) | 792, 1095 |
| HpySE526I | ACGT | 4 cut(s) | 84, 800, 828, 872 |
| Hsp92II | CATG | 1 cut(s) | 1078 |
| HspAI | GCGC | 2 cut(s) | 118, 725 |
| Kpn2I | TCCGGA | 1 cut(s) | 1104 |
| KroI | GCCGGC | 1 cut(s) | 182 |
| KroNI | GCCGGC | 1 cut(s) | 184 |
| Ksp22I | TGATCA | 1 cut(s) | 487 |
| Kzo9I | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| LguI | GCTCTTC | 1 cut(s) | 183 |
| LmnI | GCTCC | 3 cut(s) | 40, 125, 926 |
| Lsp1109I | GCAGC | 2 cut(s) | 111, 255 |
| MaeI | CTAG | 1 cut(s) | 137 |
| MaeII | ACGT | 4 cut(s) | 84, 800, 828, 872 |
| MaeIII | GTNAC | 3 cut(s) | 451, 883, 1040 |
| MalI | GATC | 9 cut(s) | 30, 56, 146, 242, 329, 489, 612, 756, 900 |
| MboI | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| MboII | GAAGA | 1 cut(s) | 200 |
| MfeI | CAATTG | 1 cut(s) | 298 |
| MhlI | GDGCHC | 1 cut(s) | 45 |
| MluCI | AATT | 8 cut(s) | 62, 298, 374, 444, 970, 1017, 1117, 1129 |
| MlyI | GAGTC | 2 cut(s) | 143, 272 |
| MmeI | TCCRAC | 4 cut(s) | 267, 366, 386, 554 |
| MreI | CGCCGGCG | 1 cut(s) | 182 |
| MroI | TCCGGA | 1 cut(s) | 1104 |
| MroNI | GCCGGC | 1 cut(s) | 182 |
| MseI | TTAA | 2 cut(s) | 804, 840 |
| MslI | CAYNNNNRTG | 2 cut(s) | 819, 1047 |
| MspA1I | CMGCKG | 1 cut(s) | 1013 |
| MspI | CCGG | 2 cut(s) | 183, 1105 |
| MspR9I | CCNGG | 2 cut(s) | 167, 957 |
| MunI | CAATTG | 1 cut(s) | 298 |
| Mva1269I | GAATGC | 1 cut(s) | 1029 |
| MvaI | CCWGG | 2 cut(s) | 167, 957 |
| MvnI | CGCG | 1 cut(s) | 78 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 105, 1086 |
| NaeI | GCCGGC | 1 cut(s) | 184 |
| NdeII | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| NgoMIV | GCCGGC | 1 cut(s) | 182 |
| NlaIII | CATG | 1 cut(s) | 1078 |
| NmuCI | GTSAC | 2 cut(s) | 883, 1040 |
| NsbI | TGCGCA | 1 cut(s) | 726 |
| OliI | CACNNNNGTG | 1 cut(s) | 1047 |
| PaqCI | CACCTGC | 1 cut(s) | 676 |
| PasI | CCCWGGG | 1 cut(s) | 166 |
| PciSI | GCTCTTC | 1 cut(s) | 183 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 75, 1045 |
| PctI | GAATGC | 1 cut(s) | 1029 |
| PdiI | GCCGGC | 1 cut(s) | 184 |
| PfeI | GAWTC | 4 cut(s) | 93, 171, 577, 691 |
| PkrI | GCNGC | 6 cut(s) | 101, 202, 248, 270, 305, 705 |
| Ple19I | CGATCG | 1 cut(s) | 147 |
| PleI | GAGTC | 2 cut(s) | 143, 271 |
| PpsI | GAGTC | 2 cut(s) | 143, 271 |
| PshAI | GACNNNNGTC | 3 cut(s) | 218, 875, 999 |
| Psp124BI | GAGCTC | 1 cut(s) | 45 |
| Psp6I | CCWGG | 2 cut(s) | 165, 955 |
| PspGI | CCWGG | 2 cut(s) | 165, 955 |
| PspPI | GGNCC | 2 cut(s) | 9, 1001 |
| PstI | CTGCAG | 1 cut(s) | 234 |
| PstNI | CAGNNNCTG | 2 cut(s) | 105, 238 |
| PvuI | CGATCG | 1 cut(s) | 147 |
| PvuII | CAGCTG | 1 cut(s) | 1013 |
| RsaI | GTAC | 2 cut(s) | 623, 698 |
| RsaNI | GTAC | 2 cut(s) | 622, 697 |
| RseI | CAYNNNNRTG | 2 cut(s) | 819, 1047 |
| SacI | GAGCTC | 1 cut(s) | 45 |
| SalI | GTCGAC | 2 cut(s) | 80, 767 |
| SapI | GCTCTTC | 1 cut(s) | 183 |
| SaqAI | TTAA | 2 cut(s) | 804, 840 |
| SatI | GCNGC | 6 cut(s) | 100, 201, 247, 269, 304, 704 |
| Sau3AI | GATC | 9 cut(s) | 28, 54, 144, 240, 327, 487, 610, 754, 898 |
| Sau96I | GGNCC | 2 cut(s) | 9, 1001 |
| ScaI | AGTACT | 1 cut(s) | 698 |
| SchI | GAGTC | 2 cut(s) | 143, 272 |
| ScrFI | CCNGG | 2 cut(s) | 167, 957 |
| SduI | GDGCHC | 1 cut(s) | 45 |
| SfcI | CTRYAG | 1 cut(s) | 230 |
| SgrAI | CRCCGGYG | 1 cut(s) | 182 |
| SgrDI | CGTCGACG | 1 cut(s) | 80 |
| SinI | GGWCC | 1 cut(s) | 1001 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 819, 1047 |
| Sse9I | AATT | 8 cut(s) | 62, 298, 374, 444, 970, 1017, 1117, 1129 |
| SspMI | CTAG | 1 cut(s) | 137 |
| SstI | GAGCTC | 1 cut(s) | 45 |
| StyD4I | CCNGG | 2 cut(s) | 165, 955 |
| TaaI | ACNGT | 4 cut(s) | 220, 367, 417, 1046 |
| TaiI | ACGT | 4 cut(s) | 87, 803, 831, 875 |
| TaqI | TCGA | 4 cut(s) | 69, 81, 147, 768 |
| TasI | AATT | 8 cut(s) | 62, 298, 374, 444, 970, 1017, 1117, 1129 |
| TatI | WGTACW | 1 cut(s) | 696 |
| TauI | GCSGC | 4 cut(s) | 203, 249, 306, 706 |
| TfiI | GAWTC | 4 cut(s) | 93, 171, 577, 691 |
| Tru1I | TTAA | 2 cut(s) | 804, 840 |
| Tru9I | TTAA | 2 cut(s) | 804, 840 |
| TscAI | CASTG | 2 cut(s) | 638, 991 |
| TseFI | GTSAC | 2 cut(s) | 883, 1040 |
| TseI | GCWGC | 2 cut(s) | 99, 268 |
| Tsp45I | GTSAC | 2 cut(s) | 883, 1040 |
| TspDTI | ATGAA | 1 cut(s) | 311 |
| TspGWI | ACGGA | 1 cut(s) | 119 |
| TspRI | CASTG | 2 cut(s) | 638, 991 |
| VpaK11BI | GGWCC | 1 cut(s) | 1001 |
| XapI | RAATTY | 2 cut(s) | 62, 374 |
| XbaI | TCTAGA | 1 cut(s) | 136 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 42 |
| XmiI | GTMKAC | 3 cut(s) | 81, 222, 768 |
| XspI | CTAG | 1 cut(s) | 137 |
| ZrmI | AGTACT | 1 cut(s) | 698 |