f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 66 - 352 | 1e-41 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 244 |
| AccI | GTMKAC | 2 cut(s) | 15, 210 |
| AccIII | TCCGGA | 1 cut(s) | 367 |
| AciI | CCGC | 2 cut(s) | 73, 94 |
| AclWI | GGATC | 1 cut(s) | 1132 |
| AcoI | YGGCCR | 2 cut(s) | 44, 1154 |
| AcsI | RAATTY | 2 cut(s) | 155, 529 |
| AcuI | CTGAAG | 1 cut(s) | 654 |
| AcyI | GRCGYC | 2 cut(s) | 245, 838 |
| AfaI | GTAC | 2 cut(s) | 335, 1007 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 18, 53, 257 |
| AflIII | ACRYGT | 1 cut(s) | 1181 |
| AgsI | TTSAA | 5 cut(s) | 379, 463, 926, 1032, 1093 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 349 |
| AjiI | CACGTC | 1 cut(s) | 234 |
| AjnI | CCWGG | 2 cut(s) | 435, 1132 |
| AluBI | AGCT | 5 cut(s) | 64, 639, 748, 936, 1001 |
| AluI | AGCT | 5 cut(s) | 64, 639, 748, 936, 1001 |
| Alw26I | GTCTC | 1 cut(s) | 369 |
| AlwI | GGATC | 1 cut(s) | 1132 |
| Aor13HI | TCCGGA | 1 cut(s) | 367 |
| AoxI | GGCC | 2 cut(s) | 44, 1154 |
| ApeKI | GCWGC | 1 cut(s) | 96 |
| ApoI | RAATTY | 2 cut(s) | 155, 529 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 332, 364 |
| AspLEI | GCGC | 1 cut(s) | 247 |
| AspS9I | GGNCC | 3 cut(s) | 21, 179, 1102 |
| AsuC2I | CCSGG | 1 cut(s) | 322 |
| AsuHPI | GGTGA | 5 cut(s) | 135, 307, 694, 866, 953 |
| AvaII | GGWCC | 3 cut(s) | 21, 179, 1102 |
| BalI | TGGCCA | 2 cut(s) | 46, 1156 |
| BanI | GGYRCC | 1 cut(s) | 244 |
| BanII | GRGCYC | 1 cut(s) | 443 |
| BauI | CACGAG | 1 cut(s) | 792 |
| BbsI | GAAGAC | 1 cut(s) | 660 |
| BbvI | GCAGC | 1 cut(s) | 108 |
| BccI | CCATC | 4 cut(s) | 170, 673, 896, 912 |
| BciT130I | CCWGG | 2 cut(s) | 437, 1134 |
| BclI | TGATCA | 1 cut(s) | 772 |
| BcnI | CCSGG | 1 cut(s) | 322 |
| BcoDI | GTCTC | 1 cut(s) | 369 |
| BfaI | CTAG | 1 cut(s) | 1071 |
| BfoI | RGCGCY | 1 cut(s) | 248 |
| BisI | GCNGC | 1 cut(s) | 97 |
| BlsI | GCNGC | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 3 cut(s) | 322, 437, 1134 |
| Bme18I | GGWCC | 3 cut(s) | 21, 179, 1102 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 349 |
| BmgBI | CACGTC | 1 cut(s) | 234 |
| BmgT120I | GGNCC | 3 cut(s) | 21, 179, 1102 |
| BmiI | GGNNCC | 4 cut(s) | 181, 246, 1141, 1177 |
| BmrFI | CCNGG | 3 cut(s) | 322, 437, 1134 |
| BmsI | GCATC | 1 cut(s) | 84 |
| BpiI | GAAGAC | 1 cut(s) | 660 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 48, 80, 1160, 1192 |
| BpmI | CTGGAG | 2 cut(s) | 279, 407 |
| BpuEI | CTTGAG | 1 cut(s) | 975 |
| BpuMI | CCSGG | 1 cut(s) | 322 |
| Bsa29I | ATCGAT | 1 cut(s) | 78 |
| BsaHI | GRCGYC | 2 cut(s) | 245, 838 |
| BsaJI | CCNNGG | 2 cut(s) | 436, 1132 |
| BsaWI | WCCGGW | 1 cut(s) | 367 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 573, 603 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 18, 53, 257 |
| Bse1I | ACTGG | 4 cut(s) | 23, 32, 246, 805 |
| BseAI | TCCGGA | 1 cut(s) | 367 |
| BseBI | CCWGG | 2 cut(s) | 437, 1134 |
| BseCI | ATCGAT | 1 cut(s) | 78 |
| BseDI | CCNNGG | 2 cut(s) | 436, 1132 |
| BseGI | GGATG | 3 cut(s) | 10, 432, 907 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 18, 53, 257 |
| BseMII | CTCAG | 2 cut(s) | 416, 477 |
| BseNI | ACTGG | 4 cut(s) | 23, 32, 246, 805 |
| BseRI | GAGGAG | 2 cut(s) | 138, 206 |
| BseXI | GCAGC | 1 cut(s) | 108 |
| BseYI | CCCAGC | 1 cut(s) | 1001 |
| BshFI | GGCC | 2 cut(s) | 46, 1156 |
| BshNI | GGYRCC | 1 cut(s) | 244 |
| BshVI | ATCGAT | 1 cut(s) | 78 |
| BsiSI | CCGG | 2 cut(s) | 322, 368 |
| BslFI | GGGAC | 1 cut(s) | 811 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 18, 53, 257 |
| BsmAI | GTCTC | 1 cut(s) | 369 |
| BsmBI | CGTCTC | 1 cut(s) | 369 |
| BsmFI | GGGAC | 1 cut(s) | 811 |
| BsmI | GAATGC | 1 cut(s) | 1110 |
| BsnI | GGCC | 2 cut(s) | 46, 1156 |
| Bsp1286I | GDGCHC | 1 cut(s) | 443 |
| Bsp13I | TCCGGA | 1 cut(s) | 367 |
| Bsp143I | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| BspACI | CCGC | 2 cut(s) | 73, 94 |
| BspANI | GGCC | 2 cut(s) | 46, 1156 |
| BspCNI | CTCAG | 2 cut(s) | 417, 478 |
| BspDI | ATCGAT | 1 cut(s) | 78 |
| BspEI | TCCGGA | 1 cut(s) | 367 |
| BspLI | GGNNCC | 4 cut(s) | 181, 246, 1141, 1177 |
| BspPI | GGATC | 1 cut(s) | 1132 |
| BspQI | GCTCTTC | 1 cut(s) | 926 |
| BspT107I | GGYRCC | 1 cut(s) | 244 |
| BsrI | ACTGG | 4 cut(s) | 23, 32, 246, 805 |
| BssECI | CCNNGG | 2 cut(s) | 436, 1132 |
| BssMI | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| BssNI | GRCGYC | 2 cut(s) | 245, 838 |
| BssSI | CACGAG | 1 cut(s) | 792 |
| Bst2BI | CACGAG | 1 cut(s) | 792 |
| Bst2UI | CCWGG | 2 cut(s) | 437, 1134 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 208, 252, 570, 897 |
| Bst6I | CTCTTC | 3 cut(s) | 168, 276, 926 |
| BstACI | GRCGYC | 2 cut(s) | 245, 838 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 102 |
| BstC8I | GCNNGC | 1 cut(s) | 483 |
| BstDEI | CTNAG | 4 cut(s) | 425, 486, 1058, 1096 |
| BstF5I | GGATG | 3 cut(s) | 10, 432, 907 |
| BstH2I | RGCGCY | 1 cut(s) | 248 |
| BstHHI | GCGC | 1 cut(s) | 247 |
| BstKTI | GATC | 5 cut(s) | 54, 315, 402, 775, 1127 |
| BstMAI | GTCTC | 1 cut(s) | 369 |
| BstMBI | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 102 |
| BstNI | CCWGG | 2 cut(s) | 437, 1134 |
| BstNSI | RCATGY | 1 cut(s) | 1185 |
| BstSCI | CCNGG | 3 cut(s) | 320, 435, 1132 |
| BstV1I | GCAGC | 1 cut(s) | 108 |
| BstV2I | GAAGAC | 1 cut(s) | 660 |
| BstX2I | RGATCY | 1 cut(s) | 1124 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 443 |
| BstYI | RGATCY | 1 cut(s) | 1124 |
| Bsu15I | ATCGAT | 1 cut(s) | 78 |
| BsuRI | GGCC | 2 cut(s) | 46, 1156 |
| BsuTUI | ATCGAT | 1 cut(s) | 78 |
| BtgZI | GCGATG | 1 cut(s) | 692 |
| BtrI | CACGTC | 1 cut(s) | 234 |
| BtsCI | GGATG | 3 cut(s) | 10, 432, 907 |
| BtsIMutI | CAGTG | 2 cut(s) | 47, 239 |
| Cac8I | GCNNGC | 1 cut(s) | 483 |
| CfoI | GCGC | 1 cut(s) | 247 |
| Cfr13I | GGNCC | 3 cut(s) | 21, 179, 1102 |
| ClaI | ATCGAT | 1 cut(s) | 78 |
| CseI | GACGC | 1 cut(s) | 827 |
| Csp6I | GTAC | 2 cut(s) | 334, 1006 |
| CviAII | CATG | 2 cut(s) | 111, 1182 |
| CviQI | GTAC | 2 cut(s) | 334, 1006 |
| DdeI | CTNAG | 4 cut(s) | 425, 486, 1058, 1096 |
| DinI | GGCGCC | 1 cut(s) | 246 |
| DpnI | GATC | 5 cut(s) | 53, 314, 401, 774, 1126 |
| DpnII | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| DriI | GACNNNNNGTC | 1 cut(s) | 349 |
| EaeI | YGGCCR | 2 cut(s) | 44, 1154 |
| Eam1104I | CTCTTC | 3 cut(s) | 168, 276, 926 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 349 |
| EarI | CTCTTC | 3 cut(s) | 168, 276, 926 |
| Eco24I | GRGCYC | 1 cut(s) | 443 |
| Eco32I | GATATC | 1 cut(s) | 845 |
| Eco47I | GGWCC | 3 cut(s) | 21, 179, 1102 |
| Eco57I | CTGAAG | 1 cut(s) | 654 |
| EcoRII | CCWGG | 2 cut(s) | 435, 1132 |
| EcoRV | GATATC | 1 cut(s) | 845 |
| EcoT38I | GRGCYC | 1 cut(s) | 443 |
| EgeI | GGCGCC | 1 cut(s) | 246 |
| EheI | GGCGCC | 1 cut(s) | 246 |
| Esp3I | CGTCTC | 1 cut(s) | 369 |
| FaeI | CATG | 2 cut(s) | 114, 1185 |
| FaiI | YATR | 5 cut(s) | 112, 625, 627, 753, 1183 |
| FaqI | GGGAC | 1 cut(s) | 811 |
| FatI | CATG | 2 cut(s) | 110, 1181 |
| FauNDI | CATATG | 1 cut(s) | 625 |
| FbaI | TGATCA | 1 cut(s) | 772 |
| FblI | GTMKAC | 2 cut(s) | 15, 210 |
| Fnu4HI | GCNGC | 1 cut(s) | 97 |
| FokI | GGATG | 3 cut(s) | 17, 419, 914 |
| FriOI | GRGCYC | 1 cut(s) | 443 |
| Fsp4HI | GCNGC | 1 cut(s) | 97 |
| FspBI | CTAG | 1 cut(s) | 1071 |
| GlaI | GCGC | 1 cut(s) | 246 |
| GluI | GCNGC | 1 cut(s) | 97 |
| GsaI | CCCAGC | 1 cut(s) | 1005 |
| GsuI | CTGGAG | 2 cut(s) | 279, 407 |
| HaeII | RGCGCY | 1 cut(s) | 248 |
| HaeIII | GGCC | 2 cut(s) | 46, 1156 |
| HapII | CCGG | 2 cut(s) | 322, 368 |
| HgaI | GACGC | 1 cut(s) | 827 |
| HhaI | GCGC | 1 cut(s) | 247 |
| Hin1I | GRCGYC | 2 cut(s) | 245, 838 |
| Hin1II | CATG | 2 cut(s) | 114, 1185 |
| Hin6I | GCGC | 1 cut(s) | 245 |
| HinP1I | GCGC | 1 cut(s) | 245 |
| HincII | GTYRAC | 1 cut(s) | 16 |
| HindII | GTYRAC | 1 cut(s) | 16 |
| HinfI | GANTC | 6 cut(s) | 80, 90, 307, 327, 344, 734 |
| HpaII | CCGG | 2 cut(s) | 322, 368 |
| HphI | GGTGA | 5 cut(s) | 135, 307, 694, 866, 953 |
| Hpy166II | GTNNAC | 5 cut(s) | 16, 211, 610, 857, 883 |
| Hpy188III | TCNNGA | 5 cut(s) | 258, 368, 776, 992, 1196 |
| Hpy8I | GTNNAC | 5 cut(s) | 16, 211, 610, 857, 883 |
| Hpy99I | CGWCG | 8 cut(s) | 17, 352, 355, 358, 361, 364, 697, 843 |
| HpyAV | CCTTC | 2 cut(s) | 150, 199 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 208, 252, 570, 897 |
| HpyCH4IV | ACGT | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 1 cut(s) | 1020 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 102 |
| HpyF3I | CTNAG | 4 cut(s) | 425, 486, 1058, 1096 |
| HpySE526I | ACGT | 1 cut(s) | 233 |
| Hsp92I | GRCGYC | 2 cut(s) | 245, 838 |
| Hsp92II | CATG | 2 cut(s) | 114, 1185 |
| HspAI | GCGC | 1 cut(s) | 245 |
| KasI | GGCGCC | 1 cut(s) | 244 |
| Kpn2I | TCCGGA | 1 cut(s) | 367 |
| Ksp22I | TGATCA | 1 cut(s) | 772 |
| Kzo9I | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| LguI | GCTCTTC | 1 cut(s) | 926 |
| LmnI | GCTCC | 1 cut(s) | 1181 |
| Lsp1109I | GCAGC | 1 cut(s) | 108 |
| LweI | GCATC | 1 cut(s) | 84 |
| MaeI | CTAG | 1 cut(s) | 1071 |
| MaeII | ACGT | 1 cut(s) | 233 |
| MaeIII | GTNAC | 1 cut(s) | 1066 |
| MalI | GATC | 5 cut(s) | 53, 314, 401, 774, 1126 |
| MboI | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| MboII | GAAGA | 8 cut(s) | 20, 155, 293, 293, 475, 660, 943, 1119 |
| MfeI | CAATTG | 1 cut(s) | 1164 |
| MflI | RGATCY | 1 cut(s) | 1124 |
| MhlI | GDGCHC | 1 cut(s) | 443 |
| MlsI | TGGCCA | 2 cut(s) | 46, 1156 |
| MluCI | AATT | 6 cut(s) | 155, 379, 404, 529, 1015, 1164 |
| MluNI | TGGCCA | 2 cut(s) | 46, 1156 |
| Mly113I | GGCGCC | 1 cut(s) | 245 |
| MlyI | GAGTC | 2 cut(s) | 338, 743 |
| MmeI | TCCRAC | 2 cut(s) | 870, 879 |
| Mox20I | TGGCCA | 2 cut(s) | 46, 1156 |
| MroI | TCCGGA | 1 cut(s) | 367 |
| MscI | TGGCCA | 2 cut(s) | 46, 1156 |
| MseI | TTAA | 2 cut(s) | 876, 1047 |
| MslI | CAYNNNNRTG | 1 cut(s) | 852 |
| Msp20I | TGGCCA | 2 cut(s) | 46, 1156 |
| MspI | CCGG | 2 cut(s) | 322, 368 |
| MspR9I | CCNGG | 3 cut(s) | 322, 437, 1134 |
| MunI | CAATTG | 1 cut(s) | 1164 |
| Mva1269I | GAATGC | 1 cut(s) | 1110 |
| MvaI | CCWGG | 2 cut(s) | 437, 1134 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 102 |
| NarI | GGCGCC | 1 cut(s) | 245 |
| NciI | CCSGG | 1 cut(s) | 322 |
| NdeI | CATATG | 1 cut(s) | 625 |
| NdeII | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| NlaIII | CATG | 2 cut(s) | 114, 1185 |
| NlaIV | GGNNCC | 4 cut(s) | 181, 246, 1141, 1177 |
| NspI | RCATGY | 1 cut(s) | 1185 |
| PciI | ACATGT | 1 cut(s) | 1181 |
| PciSI | GCTCTTC | 1 cut(s) | 926 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 285, 353, 356, 359 |
| PctI | GAATGC | 1 cut(s) | 1110 |
| PfeI | GAWTC | 4 cut(s) | 80, 90, 307, 327 |
| PflFI | GACNNNGTC | 1 cut(s) | 11 |
| PkrI | GCNGC | 1 cut(s) | 98 |
| PleI | GAGTC | 2 cut(s) | 338, 742 |
| PluTI | GGCGCC | 1 cut(s) | 248 |
| PpsI | GAGTC | 2 cut(s) | 338, 742 |
| PscI | ACATGT | 1 cut(s) | 1181 |
| Psp6I | CCWGG | 2 cut(s) | 435, 1132 |
| PspFI | CCCAGC | 1 cut(s) | 1001 |
| PspGI | CCWGG | 2 cut(s) | 435, 1132 |
| PspN4I | GGNNCC | 4 cut(s) | 181, 246, 1141, 1177 |
| PspPI | GGNCC | 3 cut(s) | 21, 179, 1102 |
| PsuI | RGATCY | 1 cut(s) | 1124 |
| PsyI | GACNNNGTC | 1 cut(s) | 11 |
| RsaI | GTAC | 2 cut(s) | 335, 1007 |
| RsaNI | GTAC | 2 cut(s) | 334, 1006 |
| RseI | CAYNNNNRTG | 1 cut(s) | 852 |
| SalI | GTCGAC | 1 cut(s) | 14 |
| SapI | GCTCTTC | 1 cut(s) | 926 |
| SaqAI | TTAA | 2 cut(s) | 876, 1047 |
| SatI | GCNGC | 1 cut(s) | 97 |
| Sau3AI | GATC | 5 cut(s) | 51, 312, 399, 772, 1124 |
| Sau96I | GGNCC | 3 cut(s) | 21, 179, 1102 |
| SchI | GAGTC | 2 cut(s) | 338, 743 |
| ScrFI | CCNGG | 3 cut(s) | 322, 437, 1134 |
| SduI | GDGCHC | 1 cut(s) | 443 |
| SfaNI | GCATC | 1 cut(s) | 84 |
| SfoI | GGCGCC | 1 cut(s) | 246 |
| SinI | GGWCC | 3 cut(s) | 21, 179, 1102 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 852 |
| SmlI | CTYRAG | 1 cut(s) | 990 |
| SmoI | CTYRAG | 1 cut(s) | 990 |
| Sse9I | AATT | 6 cut(s) | 155, 379, 404, 529, 1015, 1164 |
| SsiI | CCGC | 2 cut(s) | 73, 94 |
| SspDI | GGCGCC | 1 cut(s) | 244 |
| SspMI | CTAG | 1 cut(s) | 1071 |
| StyD4I | CCNGG | 3 cut(s) | 320, 435, 1132 |
| TaaI | ACNGT | 5 cut(s) | 13, 208, 252, 570, 897 |
| TaiI | ACGT | 1 cut(s) | 236 |
| TaqI | TCGA | 8 cut(s) | 15, 36, 78, 279, 402, 695, 759, 841 |
| TasI | AATT | 6 cut(s) | 155, 379, 404, 529, 1015, 1164 |
| TfiI | GAWTC | 4 cut(s) | 80, 90, 307, 327 |
| Tru1I | TTAA | 2 cut(s) | 876, 1047 |
| Tru9I | TTAA | 2 cut(s) | 876, 1047 |
| TscAI | CASTG | 2 cut(s) | 54, 246 |
| TseI | GCWGC | 1 cut(s) | 96 |
| TspDTI | ATGAA | 2 cut(s) | 99, 1050 |
| TspRI | CASTG | 2 cut(s) | 54, 246 |
| Tth111I | GACNNNGTC | 1 cut(s) | 11 |
| VpaK11BI | GGWCC | 3 cut(s) | 21, 179, 1102 |
| XapI | RAATTY | 2 cut(s) | 155, 529 |
| XceI | RCATGY | 1 cut(s) | 1185 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 39, 238 |
| XmiI | GTMKAC | 2 cut(s) | 15, 210 |
| XspI | CTAG | 1 cut(s) | 1071 |