f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 77 - 371 | 6.4e-39 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 924 |
| AarI | CACCTGC | 1 cut(s) | 691 |
| Acc36I | ACCTGC | 1 cut(s) | 691 |
| Acc65I | GGTACC | 1 cut(s) | 834 |
| AccB1I | GGYRCC | 1 cut(s) | 834 |
| AccBSI | CCGCTC | 1 cut(s) | 358 |
| AccI | GTMKAC | 1 cut(s) | 638 |
| AciI | CCGC | 8 cut(s) | 177, 180, 183, 356, 722, 742, 1017, 1155 |
| AclWI | GGATC | 2 cut(s) | 651, 939 |
| AcoI | YGGCCR | 1 cut(s) | 41 |
| AcsI | RAATTY | 1 cut(s) | 56 |
| AcuI | CTGAAG | 1 cut(s) | 915 |
| AcyI | GRCGYC | 1 cut(s) | 1073 |
| AfaI | GTAC | 2 cut(s) | 365, 836 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 15, 50, 360, 728 |
| AflII | CTTAAG | 1 cut(s) | 440 |
| AgsI | TTSAA | 4 cut(s) | 394, 797, 1064, 1114 |
| AjnI | CCWGG | 1 cut(s) | 1078 |
| AluBI | AGCT | 6 cut(s) | 37, 146, 206, 298, 559, 899 |
| AluI | AGCT | 6 cut(s) | 37, 146, 206, 298, 559, 899 |
| Alw21I | GWGCWC | 2 cut(s) | 39, 480 |
| Alw26I | GTCTC | 2 cut(s) | 699, 1080 |
| Alw44I | GTGCAC | 1 cut(s) | 476 |
| AlwI | GGATC | 2 cut(s) | 651, 939 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 99 |
| AoxI | GGCC | 3 cut(s) | 41, 192, 1192 |
| ApaLI | GTGCAC | 1 cut(s) | 476 |
| ApeKI | GCWGC | 1 cut(s) | 93 |
| ApoI | RAATTY | 1 cut(s) | 56 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 474, 506 |
| AseI | ATTAAT | 1 cut(s) | 863 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 676 |
| Asp718I | GGTACC | 1 cut(s) | 834 |
| AspS9I | GGNCC | 4 cut(s) | 18, 307, 1168, 1193 |
| AsuHPI | GGTGA | 5 cut(s) | 332, 355, 530, 715, 814 |
| AvaII | GGWCC | 3 cut(s) | 18, 307, 1168 |
| AxyI | CCTNAGG | 1 cut(s) | 164 |
| BaeGI | GKGCMC | 1 cut(s) | 480 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 826, 859 |
| BanI | GGYRCC | 1 cut(s) | 834 |
| BanII | GRGCYC | 1 cut(s) | 39 |
| BauI | CACGAG | 1 cut(s) | 815 |
| Bbv12I | GWGCWC | 2 cut(s) | 39, 480 |
| BbvI | GCAGC | 1 cut(s) | 105 |
| BccI | CCATC | 4 cut(s) | 379, 819, 1118, 1159 |
| BceAI | ACGGC | 1 cut(s) | 54 |
| BciT130I | CCWGG | 1 cut(s) | 1080 |
| BclI | TGATCA | 2 cut(s) | 502, 784 |
| BcoDI | GTCTC | 2 cut(s) | 699, 1080 |
| BfaI | CTAG | 1 cut(s) | 1142 |
| BfmI | CTRYAG | 1 cut(s) | 698 |
| BfrI | CTTAAG | 1 cut(s) | 440 |
| BfuAI | ACCTGC | 1 cut(s) | 691 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 191 |
| BisI | GCNGC | 3 cut(s) | 94, 180, 183 |
| BlsI | GCNGC | 3 cut(s) | 95, 181, 184 |
| Bme1390I | CCNGG | 1 cut(s) | 1080 |
| Bme18I | GGWCC | 3 cut(s) | 18, 307, 1168 |
| BmgT120I | GGNCC | 4 cut(s) | 18, 307, 1168, 1193 |
| BmiI | GGNNCC | 2 cut(s) | 836, 1139 |
| BmrFI | CCNGG | 1 cut(s) | 1080 |
| BmsI | GCATC | 2 cut(s) | 892, 1154 |
| BpmI | CTGGAG | 2 cut(s) | 126, 1053 |
| Bpu10I | CCTNAGC | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 2 cut(s) | 320, 452 |
| BsaHI | GRCGYC | 1 cut(s) | 1073 |
| BsaJI | CCNNGG | 3 cut(s) | 30, 284, 838 |
| BsaWI | WCCGGW | 2 cut(s) | 317, 340 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 963, 993 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 15, 50, 360, 728 |
| Bse118I | RCCGGY | 1 cut(s) | 185 |
| Bse1I | ACTGG | 1 cut(s) | 405 |
| Bse21I | CCTNAGG | 1 cut(s) | 164 |
| Bse3DI | GCAATG | 1 cut(s) | 1000 |
| BseBI | CCWGG | 1 cut(s) | 1080 |
| BseDI | CCNNGG | 3 cut(s) | 30, 284, 838 |
| BseGI | GGATG | 3 cut(s) | 337, 831, 1129 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 15, 50, 360, 728 |
| BseMI | GCAATG | 1 cut(s) | 1000 |
| BseMII | CTCAG | 3 cut(s) | 178, 373, 1175 |
| BseNI | ACTGG | 1 cut(s) | 405 |
| BseRI | GAGGAG | 4 cut(s) | 138, 141, 144, 317 |
| BseSI | GKGCMC | 1 cut(s) | 480 |
| BseXI | GCAGC | 1 cut(s) | 105 |
| BseYI | CCCAGC | 1 cut(s) | 559 |
| Bsh1285I | CGRYCG | 1 cut(s) | 259 |
| BshFI | GGCC | 3 cut(s) | 43, 194, 1194 |
| BshNI | GGYRCC | 1 cut(s) | 834 |
| BsiEI | CGRYCG | 1 cut(s) | 259 |
| BsiHKAI | GWGCWC | 2 cut(s) | 39, 480 |
| BsiSI | CCGG | 3 cut(s) | 186, 318, 341 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 15, 50, 360, 728 |
| BsmAI | GTCTC | 2 cut(s) | 699, 1080 |
| BsmBI | CGTCTC | 2 cut(s) | 699, 1080 |
| BsnI | GGCC | 3 cut(s) | 43, 194, 1194 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 480 |
| BspACI | CCGC | 8 cut(s) | 177, 180, 183, 356, 722, 742, 1017, 1155 |
| BspANI | GGCC | 3 cut(s) | 43, 194, 1194 |
| BspCNI | CTCAG | 3 cut(s) | 177, 372, 1174 |
| BspLI | GGNNCC | 2 cut(s) | 836, 1139 |
| BspMAI | CTGCAG | 1 cut(s) | 702 |
| BspMI | ACCTGC | 1 cut(s) | 691 |
| BspPI | GGATC | 2 cut(s) | 651, 939 |
| BspQI | GCTCTTC | 1 cut(s) | 1078 |
| BspT107I | GGYRCC | 1 cut(s) | 834 |
| BspTI | CTTAAG | 1 cut(s) | 440 |
| BsrBI | CCGCTC | 1 cut(s) | 358 |
| BsrDI | GCAATG | 1 cut(s) | 1000 |
| BsrFI | RCCGGY | 1 cut(s) | 185 |
| BsrI | ACTGG | 1 cut(s) | 405 |
| BssAI | RCCGGY | 1 cut(s) | 185 |
| BssECI | CCNNGG | 3 cut(s) | 30, 284, 838 |
| BssNAI | GTATAC | 1 cut(s) | 639 |
| BssNI | GRCGYC | 1 cut(s) | 1073 |
| BssSI | CACGAG | 1 cut(s) | 815 |
| BssT1I | CCWWGG | 3 cut(s) | 30, 284, 838 |
| Bst1107I | GTATAC | 1 cut(s) | 639 |
| Bst2BI | CACGAG | 1 cut(s) | 815 |
| Bst2UI | CCWGG | 1 cut(s) | 1080 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| Bst6I | CTCTTC | 2 cut(s) | 218, 1078 |
| BstACI | GRCGYC | 1 cut(s) | 1073 |
| BstAFI | CTTAAG | 1 cut(s) | 440 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 99 |
| BstC8I | GCNNGC | 2 cut(s) | 187, 557 |
| BstDEI | CTNAG | 3 cut(s) | 164, 359, 1161 |
| BstEII | GGTNACC | 1 cut(s) | 343 |
| BstF5I | GGATG | 3 cut(s) | 337, 831, 1129 |
| BstMAI | GTCTC | 2 cut(s) | 699, 1080 |
| BstMCI | CGRYCG | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 99, 191, 430 |
| BstNI | CCWGG | 1 cut(s) | 1080 |
| BstPI | GGTNACC | 1 cut(s) | 343 |
| BstSCI | CCNGG | 1 cut(s) | 1078 |
| BstSFI | CTRYAG | 1 cut(s) | 698 |
| BstSLI | GKGCMC | 1 cut(s) | 480 |
| BstV1I | GCAGC | 1 cut(s) | 105 |
| BstZ17I | GTATAC | 1 cut(s) | 639 |
| Bsu36I | CCTNAGG | 1 cut(s) | 164 |
| BsuRI | GGCC | 3 cut(s) | 43, 194, 1194 |
| BtsCI | GGATG | 3 cut(s) | 337, 831, 1129 |
| BtsIMutI | CAGTG | 1 cut(s) | 242 |
| BveI | ACCTGC | 1 cut(s) | 691 |
| Cac8I | GCNNGC | 2 cut(s) | 187, 557 |
| CaiI | CAGNNNCTG | 1 cut(s) | 99 |
| Cfr10I | RCCGGY | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 4 cut(s) | 18, 307, 1168, 1193 |
| CseI | GACGC | 2 cut(s) | 85, 1062 |
| Csp6I | GTAC | 2 cut(s) | 364, 835 |
| CviAII | CATG | 5 cut(s) | 235, 434, 493, 596, 681 |
| CviQI | GTAC | 2 cut(s) | 364, 835 |
| DdeI | CTNAG | 3 cut(s) | 164, 359, 1161 |
| DraI | TTTAAA | 1 cut(s) | 916 |
| EaeI | YGGCCR | 1 cut(s) | 41 |
| Eam1104I | CTCTTC | 2 cut(s) | 218, 1078 |
| EarI | CTCTTC | 2 cut(s) | 218, 1078 |
| EciI | GGCGGA | 2 cut(s) | 757, 1006 |
| Ecl136II | GAGCTC | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 3 cut(s) | 30, 284, 838 |
| Eco24I | GRGCYC | 1 cut(s) | 39 |
| Eco32I | GATATC | 1 cut(s) | 628 |
| Eco47I | GGWCC | 3 cut(s) | 18, 307, 1168 |
| Eco53kI | GAGCTC | 1 cut(s) | 37 |
| Eco57I | CTGAAG | 1 cut(s) | 915 |
| Eco81I | CCTNAGG | 1 cut(s) | 164 |
| Eco91I | GGTNACC | 1 cut(s) | 343 |
| EcoICRI | GAGCTC | 1 cut(s) | 37 |
| EcoO109I | RGGNCCY | 1 cut(s) | 307 |
| EcoO65I | GGTNACC | 1 cut(s) | 343 |
| EcoRII | CCWGG | 1 cut(s) | 1078 |
| EcoRV | GATATC | 1 cut(s) | 628 |
| EcoT14I | CCWWGG | 3 cut(s) | 30, 284, 838 |
| EcoT38I | GRGCYC | 1 cut(s) | 39 |
| ErhI | CCWWGG | 3 cut(s) | 30, 284, 838 |
| Esp3I | CGTCTC | 2 cut(s) | 699, 1080 |
| FaeI | CATG | 5 cut(s) | 238, 437, 496, 599, 684 |
| FatI | CATG | 5 cut(s) | 234, 433, 492, 595, 680 |
| FauI | CCCGC | 2 cut(s) | 184, 363 |
| FbaI | TGATCA | 2 cut(s) | 502, 784 |
| FblI | GTMKAC | 1 cut(s) | 638 |
| Fnu4HI | GCNGC | 3 cut(s) | 94, 180, 183 |
| FokI | GGATG | 3 cut(s) | 324, 838, 1136 |
| FriOI | GRGCYC | 1 cut(s) | 39 |
| Fsp4HI | GCNGC | 3 cut(s) | 94, 180, 183 |
| FspBI | CTAG | 1 cut(s) | 1142 |
| GluI | GCNGC | 3 cut(s) | 94, 180, 183 |
| GsaI | CCCAGC | 1 cut(s) | 563 |
| GsuI | CTGGAG | 2 cut(s) | 126, 1053 |
| HaeIII | GGCC | 3 cut(s) | 43, 194, 1194 |
| HapII | CCGG | 3 cut(s) | 186, 318, 341 |
| HgaI | GACGC | 2 cut(s) | 85, 1062 |
| Hin1I | GRCGYC | 1 cut(s) | 1073 |
| Hin1II | CATG | 5 cut(s) | 238, 437, 496, 599, 684 |
| HindIII | AAGCTT | 1 cut(s) | 296 |
| HinfI | GANTC | 3 cut(s) | 239, 706, 1035 |
| HpaII | CCGG | 3 cut(s) | 186, 318, 341 |
| HphI | GGTGA | 5 cut(s) | 332, 355, 530, 715, 814 |
| Hpy166II | GTNNAC | 3 cut(s) | 332, 478, 639 |
| Hpy188I | TCNGA | 5 cut(s) | 22, 53, 86, 895, 1164 |
| Hpy188III | TCNNGA | 5 cut(s) | 764, 815, 845, 851, 935 |
| Hpy8I | GTNNAC | 3 cut(s) | 332, 478, 639 |
| Hpy99I | CGWCG | 3 cut(s) | 80, 254, 257 |
| HpyAV | CCTTC | 2 cut(s) | 545, 1188 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 5 cut(s) | 478, 700, 905, 1050, 1101 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 99, 191, 430 |
| HpyF3I | CTNAG | 3 cut(s) | 164, 359, 1161 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92I | GRCGYC | 1 cut(s) | 1073 |
| Hsp92II | CATG | 5 cut(s) | 238, 437, 496, 599, 684 |
| KpnI | GGTACC | 1 cut(s) | 838 |
| KroI | GCCGGC | 1 cut(s) | 185 |
| KroNI | GCCGGC | 1 cut(s) | 187 |
| Ksp22I | TGATCA | 2 cut(s) | 502, 784 |
| LguI | GCTCTTC | 1 cut(s) | 1078 |
| LmnI | GCTCC | 2 cut(s) | 34, 151 |
| Lsp1109I | GCAGC | 1 cut(s) | 105 |
| LweI | GCATC | 2 cut(s) | 892, 1154 |
| MaeI | CTAG | 1 cut(s) | 1142 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MaeIII | GTNAC | 3 cut(s) | 240, 343, 806 |
| MbiI | CCGCTC | 1 cut(s) | 358 |
| MboII | GAAGA | 4 cut(s) | 17, 205, 261, 1095 |
| MhlI | GDGCHC | 2 cut(s) | 39, 480 |
| MlyI | GAGTC | 2 cut(s) | 248, 1044 |
| MmeI | TCCRAC | 2 cut(s) | 909, 1195 |
| MreI | CGCCGGCG | 1 cut(s) | 185 |
| MroNI | GCCGGC | 1 cut(s) | 185 |
| MroXI | GAANNNNTTC | 1 cut(s) | 676 |
| MseI | TTAA | 6 cut(s) | 312, 441, 863, 915, 954, 989 |
| MslI | CAYNNNNRTG | 3 cut(s) | 600, 621, 1150 |
| MspCI | CTTAAG | 1 cut(s) | 440 |
| MspI | CCGG | 3 cut(s) | 186, 318, 341 |
| MspR9I | CCNGG | 1 cut(s) | 1080 |
| MvaI | CCWGG | 1 cut(s) | 1080 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 99, 191, 430 |
| NaeI | GCCGGC | 1 cut(s) | 187 |
| NgoMIV | GCCGGC | 1 cut(s) | 185 |
| NlaIII | CATG | 5 cut(s) | 238, 437, 496, 599, 684 |
| NlaIV | GGNNCC | 2 cut(s) | 836, 1139 |
| NmeAIII | GCCGAG | 1 cut(s) | 1170 |
| NmuCI | GTSAC | 2 cut(s) | 240, 343 |
| PaqCI | CACCTGC | 1 cut(s) | 691 |
| PciSI | GCTCTTC | 1 cut(s) | 1078 |
| PdiI | GCCGGC | 1 cut(s) | 187 |
| PdmI | GAANNNNTTC | 1 cut(s) | 676 |
| PfeI | GAWTC | 1 cut(s) | 706 |
| PfoI | TCCNGGA | 1 cut(s) | 1078 |
| PkrI | GCNGC | 3 cut(s) | 95, 181, 184 |
| Ple19I | CGATCG | 1 cut(s) | 259 |
| PleI | GAGTC | 2 cut(s) | 247, 1043 |
| PpsI | GAGTC | 2 cut(s) | 247, 1043 |
| PpuMI | RGGWCCY | 1 cut(s) | 307 |
| PshBI | ATTAAT | 1 cut(s) | 863 |
| PsiI | TTATAA | 1 cut(s) | 924 |
| Psp124BI | GAGCTC | 1 cut(s) | 39 |
| Psp5II | RGGWCCY | 1 cut(s) | 307 |
| Psp6I | CCWGG | 1 cut(s) | 1078 |
| PspEI | GGTNACC | 1 cut(s) | 343 |
| PspFI | CCCAGC | 1 cut(s) | 559 |
| PspGI | CCWGG | 1 cut(s) | 1078 |
| PspN4I | GGNNCC | 2 cut(s) | 836, 1139 |
| PspPI | GGNCC | 4 cut(s) | 18, 307, 1168, 1193 |
| PspPPI | RGGWCCY | 1 cut(s) | 307 |
| PstI | CTGCAG | 1 cut(s) | 702 |
| PstNI | CAGNNNCTG | 1 cut(s) | 99 |
| PvuI | CGATCG | 1 cut(s) | 259 |
| RsaI | GTAC | 2 cut(s) | 365, 836 |
| RsaNI | GTAC | 2 cut(s) | 364, 835 |
| RseI | CAYNNNNRTG | 3 cut(s) | 600, 621, 1150 |
| SacI | GAGCTC | 1 cut(s) | 39 |
| SapI | GCTCTTC | 1 cut(s) | 1078 |
| SaqAI | TTAA | 6 cut(s) | 312, 441, 863, 915, 954, 989 |
| SatI | GCNGC | 3 cut(s) | 94, 180, 183 |
| Sau96I | GGNCC | 4 cut(s) | 18, 307, 1168, 1193 |
| SchI | GAGTC | 2 cut(s) | 248, 1044 |
| ScrFI | CCNGG | 1 cut(s) | 1080 |
| SduI | GDGCHC | 2 cut(s) | 39, 480 |
| SfaNI | GCATC | 2 cut(s) | 892, 1154 |
| SfcI | CTRYAG | 1 cut(s) | 698 |
| SgrAI | CRCCGGYG | 1 cut(s) | 185 |
| SinI | GGWCC | 3 cut(s) | 18, 307, 1168 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 600, 621, 1150 |
| SmlI | CTYRAG | 3 cut(s) | 299, 440, 467 |
| SmoI | CTYRAG | 3 cut(s) | 299, 440, 467 |
| SsiI | CCGC | 8 cut(s) | 177, 180, 183, 356, 722, 742, 1017, 1155 |
| SspMI | CTAG | 1 cut(s) | 1142 |
| SstI | GAGCTC | 1 cut(s) | 39 |
| StyD4I | CCNGG | 1 cut(s) | 1078 |
| StyI | CCWWGG | 3 cut(s) | 30, 284, 838 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TaqI | TCGA | 3 cut(s) | 75, 383, 1181 |
| TaqII | GACCGA | 1 cut(s) | 263 |
| TauI | GCSGC | 2 cut(s) | 182, 185 |
| TfiI | GAWTC | 1 cut(s) | 706 |
| Tru1I | TTAA | 6 cut(s) | 312, 441, 863, 915, 954, 989 |
| Tru9I | TTAA | 6 cut(s) | 312, 441, 863, 915, 954, 989 |
| TscAI | CASTG | 1 cut(s) | 249 |
| TseFI | GTSAC | 2 cut(s) | 240, 343 |
| TseI | GCWGC | 1 cut(s) | 93 |
| Tsp45I | GTSAC | 2 cut(s) | 240, 343 |
| TspDTI | ATGAA | 4 cut(s) | 308, 618, 669, 873 |
| TspGWI | ACGGA | 1 cut(s) | 656 |
| TspRI | CASTG | 1 cut(s) | 249 |
| Vha464I | CTTAAG | 1 cut(s) | 440 |
| VneI | GTGCAC | 1 cut(s) | 476 |
| VpaK11BI | GGWCC | 3 cut(s) | 18, 307, 1168 |
| VspI | ATTAAT | 1 cut(s) | 863 |
| XapI | RAATTY | 1 cut(s) | 56 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1182 |
| XmiI | GTMKAC | 1 cut(s) | 638 |
| XmnI | GAANNNNTTC | 1 cut(s) | 676 |
| XspI | CTAG | 1 cut(s) | 1142 |