f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 86 - 351 | 6.6e-36 | KIB1-4 beta-propeller |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 546, 912 |
| AarI | CACCTGC | 1 cut(s) | 691 |
| Acc36I | ACCTGC | 1 cut(s) | 691 |
| AccB1I | GGYRCC | 1 cut(s) | 182 |
| AccBSI | CCGCTC | 1 cut(s) | 358 |
| AclWI | GGATC | 2 cut(s) | 927, 997 |
| AcoI | YGGCCR | 1 cut(s) | 41 |
| AcsI | RAATTY | 2 cut(s) | 56, 443 |
| AcyI | GRCGYC | 1 cut(s) | 183 |
| AfaI | GTAC | 5 cut(s) | 81, 223, 336, 365, 527 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 15, 50, 317, 728, 838 |
| AgsI | TTSAA | 6 cut(s) | 384, 511, 797, 904, 1091, 1112 |
| AluBI | AGCT | 5 cut(s) | 206, 298, 559, 695, 916 |
| AluI | AGCT | 5 cut(s) | 206, 298, 559, 695, 916 |
| Alw26I | GTCTC | 1 cut(s) | 1006 |
| AlwI | GGATC | 2 cut(s) | 927, 997 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 99 |
| AoxI | GGCC | 2 cut(s) | 41, 828 |
| ApaI | GGGCCC | 1 cut(s) | 832 |
| ApeKI | GCWGC | 2 cut(s) | 93, 261 |
| ApoI | RAATTY | 2 cut(s) | 56, 443 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 676, 1075 |
| AspLEI | GCGC | 1 cut(s) | 185 |
| AspS9I | GGNCC | 4 cut(s) | 18, 307, 828, 829 |
| AsuHPI | GGTGA | 4 cut(s) | 355, 715, 814, 1092 |
| AvaII | GGWCC | 2 cut(s) | 18, 307 |
| BaeGI | GKGCMC | 1 cut(s) | 832 |
| BanI | GGYRCC | 1 cut(s) | 182 |
| BanII | GRGCYC | 1 cut(s) | 832 |
| BauI | CACGAG | 1 cut(s) | 594 |
| BbvI | GCAGC | 2 cut(s) | 105, 273 |
| BccI | CCATC | 1 cut(s) | 980 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BclI | TGATCA | 1 cut(s) | 784 |
| BcoDI | GTCTC | 1 cut(s) | 1006 |
| BfoI | RGCGCY | 1 cut(s) | 186 |
| BfuAI | ACCTGC | 1 cut(s) | 691 |
| BglII | AGATCT | 1 cut(s) | 36 |
| BisI | GCNGC | 4 cut(s) | 70, 94, 262, 356 |
| BlsI | GCNGC | 4 cut(s) | 71, 95, 263, 357 |
| Bme18I | GGWCC | 2 cut(s) | 18, 307 |
| BmgT120I | GGNCC | 4 cut(s) | 18, 307, 828, 829 |
| BmiI | GGNNCC | 5 cut(s) | 184, 309, 829, 830, 831 |
| BmsI | GCATC | 2 cut(s) | 81, 874 |
| BpmI | CTGGAG | 2 cut(s) | 422, 1041 |
| Bpu10I | CCTNAGC | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 1 cut(s) | 320 |
| BsaHI | GRCGYC | 1 cut(s) | 183 |
| BsaJI | CCNNGG | 2 cut(s) | 30, 284 |
| BsaWI | WCCGGW | 2 cut(s) | 317, 340 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 157, 187, 299, 329 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 15, 50, 317, 728, 838 |
| Bse118I | RCCGGY | 1 cut(s) | 185 |
| Bse1I | ACTGG | 3 cut(s) | 348, 405, 1072 |
| Bse3DI | GCAATG | 1 cut(s) | 988 |
| BseDI | CCNNGG | 2 cut(s) | 30, 284 |
| BseGI | GGATG | 2 cut(s) | 337, 607 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 15, 50, 317, 728, 838 |
| BseMI | GCAATG | 1 cut(s) | 988 |
| BseMII | CTCAG | 2 cut(s) | 373, 821 |
| BseNI | ACTGG | 3 cut(s) | 348, 405, 1072 |
| BseRI | GAGGAG | 3 cut(s) | 138, 141, 144 |
| BseSI | GKGCMC | 1 cut(s) | 832 |
| BseXI | GCAGC | 2 cut(s) | 105, 273 |
| BseYI | CCCAGC | 1 cut(s) | 559 |
| BsgI | GTGCAG | 1 cut(s) | 497 |
| BshFI | GGCC | 2 cut(s) | 43, 830 |
| BshNI | GGYRCC | 1 cut(s) | 182 |
| BsiSI | CCGG | 4 cut(s) | 180, 186, 318, 341 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 15, 50, 317, 728, 838 |
| BsmAI | GTCTC | 1 cut(s) | 1006 |
| BsmI | GAATGC | 1 cut(s) | 616 |
| BsnI | GGCC | 2 cut(s) | 43, 830 |
| Bsp120I | GGGCCC | 1 cut(s) | 828 |
| Bsp1286I | GDGCHC | 1 cut(s) | 832 |
| Bsp143I | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| BspANI | GGCC | 2 cut(s) | 43, 830 |
| BspCNI | CTCAG | 2 cut(s) | 372, 820 |
| BspLI | GGNNCC | 5 cut(s) | 184, 309, 829, 830, 831 |
| BspMI | ACCTGC | 1 cut(s) | 691 |
| BspPI | GGATC | 2 cut(s) | 927, 997 |
| BspT107I | GGYRCC | 1 cut(s) | 182 |
| BsrBI | CCGCTC | 1 cut(s) | 358 |
| BsrDI | GCAATG | 1 cut(s) | 988 |
| BsrFI | RCCGGY | 1 cut(s) | 185 |
| BsrI | ACTGG | 3 cut(s) | 348, 405, 1072 |
| BssAI | RCCGGY | 1 cut(s) | 185 |
| BssECI | CCNNGG | 2 cut(s) | 30, 284 |
| BssMI | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| BssNI | GRCGYC | 1 cut(s) | 183 |
| BssSI | CACGAG | 1 cut(s) | 594 |
| BssT1I | CCWWGG | 1 cut(s) | 30 |
| Bst2BI | CACGAG | 1 cut(s) | 594 |
| Bst4CI | ACNGT | 2 cut(s) | 10, 466 |
| Bst6I | CTCTTC | 2 cut(s) | 147, 218 |
| BstACI | GRCGYC | 1 cut(s) | 183 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 99 |
| BstC8I | GCNNGC | 2 cut(s) | 187, 740 |
| BstDEI | CTNAG | 2 cut(s) | 359, 807 |
| BstDSI | CCRYGG | 1 cut(s) | 284 |
| BstEII | GGTNACC | 1 cut(s) | 343 |
| BstF5I | GGATG | 2 cut(s) | 337, 607 |
| BstH2I | RGCGCY | 1 cut(s) | 186 |
| BstHHI | GCGC | 1 cut(s) | 185 |
| BstKTI | GATC | 8 cut(s) | 25, 39, 48, 278, 772, 787, 922, 992 |
| BstMAI | GTCTC | 1 cut(s) | 1006 |
| BstMBI | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 93, 99 |
| BstNSI | RCATGY | 1 cut(s) | 1127 |
| BstPI | GGTNACC | 1 cut(s) | 343 |
| BstSLI | GKGCMC | 1 cut(s) | 832 |
| BstV1I | GCAGC | 2 cut(s) | 105, 273 |
| BstX2I | RGATCY | 2 cut(s) | 36, 989 |
| BstYI | RGATCY | 2 cut(s) | 36, 989 |
| BsuRI | GGCC | 2 cut(s) | 43, 830 |
| BtgI | CCRYGG | 1 cut(s) | 284 |
| BtsCI | GGATG | 2 cut(s) | 337, 607 |
| BveI | ACCTGC | 1 cut(s) | 691 |
| Cac8I | GCNNGC | 2 cut(s) | 187, 740 |
| CaiI | CAGNNNCTG | 1 cut(s) | 99 |
| CfoI | GCGC | 1 cut(s) | 185 |
| Cfr10I | RCCGGY | 1 cut(s) | 185 |
| Cfr13I | GGNCC | 4 cut(s) | 18, 307, 828, 829 |
| CseI | GACGC | 1 cut(s) | 85 |
| Csp6I | GTAC | 5 cut(s) | 80, 222, 335, 364, 526 |
| CviAII | CATG | 4 cut(s) | 235, 493, 681, 1124 |
| CviQI | GTAC | 5 cut(s) | 80, 222, 335, 364, 526 |
| DdeI | CTNAG | 2 cut(s) | 359, 807 |
| DinI | GGCGCC | 1 cut(s) | 184 |
| DpnI | GATC | 8 cut(s) | 24, 38, 47, 277, 771, 786, 921, 991 |
| DpnII | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| EaeI | YGGCCR | 1 cut(s) | 41 |
| Eam1104I | CTCTTC | 2 cut(s) | 147, 218 |
| EarI | CTCTTC | 2 cut(s) | 147, 218 |
| EciI | GGCGGA | 2 cut(s) | 757, 994 |
| Eco130I | CCWWGG | 1 cut(s) | 30 |
| Eco24I | GRGCYC | 1 cut(s) | 832 |
| Eco32I | GATATC | 1 cut(s) | 628 |
| Eco47I | GGWCC | 2 cut(s) | 18, 307 |
| Eco91I | GGTNACC | 1 cut(s) | 343 |
| EcoO109I | RGGNCCY | 3 cut(s) | 307, 828, 829 |
| EcoO65I | GGTNACC | 1 cut(s) | 343 |
| EcoRV | GATATC | 1 cut(s) | 628 |
| EcoT14I | CCWWGG | 1 cut(s) | 30 |
| EcoT38I | GRGCYC | 1 cut(s) | 832 |
| EgeI | GGCGCC | 1 cut(s) | 184 |
| EheI | GGCGCC | 1 cut(s) | 184 |
| ErhI | CCWWGG | 1 cut(s) | 30 |
| FaeI | CATG | 4 cut(s) | 238, 496, 684, 1127 |
| FatI | CATG | 4 cut(s) | 234, 492, 680, 1123 |
| FauI | CCCGC | 1 cut(s) | 731 |
| FbaI | TGATCA | 1 cut(s) | 784 |
| Fnu4HI | GCNGC | 4 cut(s) | 70, 94, 262, 356 |
| FokI | GGATG | 2 cut(s) | 324, 614 |
| FriOI | GRGCYC | 1 cut(s) | 832 |
| Fsp4HI | GCNGC | 4 cut(s) | 70, 94, 262, 356 |
| GlaI | GCGC | 1 cut(s) | 184 |
| GluI | GCNGC | 4 cut(s) | 70, 94, 262, 356 |
| GsaI | CCCAGC | 1 cut(s) | 563 |
| GsuI | CTGGAG | 2 cut(s) | 422, 1041 |
| HaeII | RGCGCY | 1 cut(s) | 186 |
| HaeIII | GGCC | 2 cut(s) | 43, 830 |
| HapII | CCGG | 4 cut(s) | 180, 186, 318, 341 |
| HgaI | GACGC | 1 cut(s) | 85 |
| HhaI | GCGC | 1 cut(s) | 185 |
| Hin1I | GRCGYC | 1 cut(s) | 183 |
| Hin1II | CATG | 4 cut(s) | 238, 496, 684, 1127 |
| Hin6I | GCGC | 1 cut(s) | 183 |
| HinP1I | GCGC | 1 cut(s) | 183 |
| HincII | GTYRAC | 2 cut(s) | 591, 1062 |
| HindII | GTYRAC | 2 cut(s) | 591, 1062 |
| HindIII | AAGCTT | 1 cut(s) | 296 |
| HinfI | GANTC | 4 cut(s) | 239, 592, 706, 805 |
| HpaI | GTTAAC | 1 cut(s) | 1062 |
| HpaII | CCGG | 4 cut(s) | 180, 186, 318, 341 |
| HphI | GGTGA | 4 cut(s) | 355, 715, 814, 1092 |
| Hpy166II | GTNNAC | 4 cut(s) | 398, 526, 591, 1062 |
| Hpy188I | TCNGA | 4 cut(s) | 22, 53, 883, 1131 |
| Hpy188III | TCNNGA | 3 cut(s) | 273, 839, 923 |
| Hpy8I | GTNNAC | 4 cut(s) | 398, 526, 591, 1062 |
| Hpy99I | CGWCG | 1 cut(s) | 80 |
| HpyAV | CCTTC | 3 cut(s) | 545, 1021, 1097 |
| HpyCH4III | ACNGT | 2 cut(s) | 10, 466 |
| HpyCH4IV | ACGT | 2 cut(s) | 78, 167 |
| HpyCH4V | TGCA | 5 cut(s) | 478, 700, 887, 1038, 1123 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 93, 99 |
| HpyF3I | CTNAG | 2 cut(s) | 359, 807 |
| HpySE526I | ACGT | 2 cut(s) | 78, 167 |
| Hsp92I | GRCGYC | 1 cut(s) | 183 |
| Hsp92II | CATG | 4 cut(s) | 238, 496, 684, 1127 |
| HspAI | GCGC | 1 cut(s) | 183 |
| KasI | GGCGCC | 1 cut(s) | 182 |
| KroI | GCCGGC | 1 cut(s) | 185 |
| KroNI | GCCGGC | 1 cut(s) | 187 |
| Ksp22I | TGATCA | 1 cut(s) | 784 |
| KspAI | GTTAAC | 1 cut(s) | 1062 |
| Kzo9I | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| LmnI | GCTCC | 1 cut(s) | 107 |
| Lsp1109I | GCAGC | 2 cut(s) | 105, 273 |
| LweI | GCATC | 2 cut(s) | 81, 874 |
| MaeII | ACGT | 2 cut(s) | 78, 167 |
| MaeIII | GTNAC | 6 cut(s) | 343, 460, 500, 802, 849, 1143 |
| MalI | GATC | 8 cut(s) | 24, 38, 47, 277, 771, 786, 921, 991 |
| MbiI | CCGCTC | 1 cut(s) | 358 |
| MboI | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| MboII | GAAGA | 6 cut(s) | 17, 108, 134, 205, 261, 1083 |
| MfeI | CAATTG | 1 cut(s) | 894 |
| MflI | RGATCY | 2 cut(s) | 36, 989 |
| MhlI | GDGCHC | 1 cut(s) | 832 |
| MluCI | AATT | 5 cut(s) | 56, 443, 675, 894, 1033 |
| Mly113I | GGCGCC | 1 cut(s) | 183 |
| MlyI | GAGTC | 3 cut(s) | 248, 586, 799 |
| MroNI | GCCGGC | 1 cut(s) | 185 |
| MroXI | GAANNNNTTC | 2 cut(s) | 676, 1075 |
| MseI | TTAA | 4 cut(s) | 441, 536, 977, 1061 |
| MspA1I | CMGCKG | 1 cut(s) | 264 |
| MspI | CCGG | 4 cut(s) | 180, 186, 318, 341 |
| MunI | CAATTG | 1 cut(s) | 894 |
| Mva1269I | GAATGC | 1 cut(s) | 616 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 93, 99 |
| NaeI | GCCGGC | 1 cut(s) | 187 |
| NarI | GGCGCC | 1 cut(s) | 183 |
| NdeII | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| NgoMIV | GCCGGC | 1 cut(s) | 185 |
| NlaIII | CATG | 4 cut(s) | 238, 496, 684, 1127 |
| NlaIV | GGNNCC | 5 cut(s) | 184, 309, 829, 830, 831 |
| NmuCI | GTSAC | 3 cut(s) | 343, 500, 802 |
| NspI | RCATGY | 1 cut(s) | 1127 |
| PaqCI | CACCTGC | 1 cut(s) | 691 |
| PctI | GAATGC | 1 cut(s) | 616 |
| PdiI | GCCGGC | 1 cut(s) | 187 |
| PdmI | GAANNNNTTC | 2 cut(s) | 676, 1075 |
| PfeI | GAWTC | 1 cut(s) | 706 |
| PkrI | GCNGC | 4 cut(s) | 71, 95, 263, 357 |
| PleI | GAGTC | 3 cut(s) | 247, 586, 799 |
| PluTI | GGCGCC | 1 cut(s) | 186 |
| PpsI | GAGTC | 3 cut(s) | 247, 586, 799 |
| PpuMI | RGGWCCY | 1 cut(s) | 307 |
| PsiI | TTATAA | 2 cut(s) | 546, 912 |
| Psp5II | RGGWCCY | 1 cut(s) | 307 |
| PspEI | GGTNACC | 1 cut(s) | 343 |
| PspFI | CCCAGC | 1 cut(s) | 559 |
| PspN4I | GGNNCC | 5 cut(s) | 184, 309, 829, 830, 831 |
| PspOMI | GGGCCC | 1 cut(s) | 828 |
| PspPI | GGNCC | 4 cut(s) | 18, 307, 828, 829 |
| PspPPI | RGGWCCY | 1 cut(s) | 307 |
| PstNI | CAGNNNCTG | 1 cut(s) | 99 |
| PsuI | RGATCY | 2 cut(s) | 36, 989 |
| RsaI | GTAC | 5 cut(s) | 81, 223, 336, 365, 527 |
| RsaNI | GTAC | 5 cut(s) | 80, 222, 335, 364, 526 |
| SaqAI | TTAA | 4 cut(s) | 441, 536, 977, 1061 |
| SatI | GCNGC | 4 cut(s) | 70, 94, 262, 356 |
| Sau3AI | GATC | 8 cut(s) | 22, 36, 45, 275, 769, 784, 919, 989 |
| Sau96I | GGNCC | 4 cut(s) | 18, 307, 828, 829 |
| SchI | GAGTC | 3 cut(s) | 248, 586, 799 |
| SduI | GDGCHC | 1 cut(s) | 832 |
| SfaNI | GCATC | 2 cut(s) | 81, 874 |
| SfoI | GGCGCC | 1 cut(s) | 184 |
| SinI | GGWCC | 2 cut(s) | 18, 307 |
| SmlI | CTYRAG | 1 cut(s) | 299 |
| SmoI | CTYRAG | 1 cut(s) | 299 |
| Sse9I | AATT | 5 cut(s) | 56, 443, 675, 894, 1033 |
| SspDI | GGCGCC | 1 cut(s) | 182 |
| StyI | CCWWGG | 1 cut(s) | 30 |
| TaaI | ACNGT | 2 cut(s) | 10, 466 |
| TaiI | ACGT | 2 cut(s) | 81, 170 |
| TaqI | TCGA | 3 cut(s) | 75, 249, 942 |
| TasI | AATT | 5 cut(s) | 56, 443, 675, 894, 1033 |
| TatI | WGTACW | 1 cut(s) | 334 |
| TauI | GCSGC | 2 cut(s) | 72, 358 |
| TfiI | GAWTC | 1 cut(s) | 706 |
| Tru1I | TTAA | 4 cut(s) | 441, 536, 977, 1061 |
| Tru9I | TTAA | 4 cut(s) | 441, 536, 977, 1061 |
| TseFI | GTSAC | 3 cut(s) | 343, 500, 802 |
| TseI | GCWGC | 2 cut(s) | 93, 261 |
| Tsp45I | GTSAC | 3 cut(s) | 343, 500, 802 |
| TspDTI | ATGAA | 3 cut(s) | 308, 618, 669 |
| VpaK11BI | GGWCC | 2 cut(s) | 18, 307 |
| XapI | RAATTY | 2 cut(s) | 56, 443 |
| XceI | RCATGY | 1 cut(s) | 1127 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1091 |
| XmnI | GAANNNNTTC | 2 cut(s) | 676, 1075 |