Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000246

Physical Location & Seq

Genomic Coordinates Forward (+)

9737958 .. 9739136

Gene Structure 1179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016753

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGGACACCGTGAAATGGTCCGATCTTCCCAAGGAGCTCTGGCCGATCATCGGAAAATTCCTCCATAGCCGCATCGACGTTCTCCGATTTCGCAGCGTCTGCTCTATATGGCGTTCCTCTCGCCCTCCTTTCCAGCGACCTCCACCTCCTCCTCCTCTTCCCCTCAGGTTCTCTCCCGCCGGCGCCGGCGAGGCCAAAAGCGAAGCTCTACTCTTCCAAAGCACAACCTATCGCATGGAGTCACTGACCGACGACGATCGTTGTGGTTCTTCACAATCAAAGCCTTGGTTGATGAAGCTTGAGGAGGACCTTAATTCCGGTGAAATGCGTTTACTACATCCGGTGACCAATTCCCCGCTCAGGTACTCCCCTAATTCTACTTCGAAGGTGTTCAACTTACTGGACTTTCGGCTTGTTGAGTTGCGAAAATCGCATGGTCTTAAGTTTGGCAAGAACAATGTTGGTCTTATGTCTGTGCACAAATTGGTAGTCATGCCTTGTGACCATTTGGGTTTTGGTGATGAGTGTGTGATGTTTATGCTATATAACGAAGGCAAGCTGGGTTTTGTGAGATTTGGAGATGAGAAACTGACCCATGTAGATGAGCAAAACTCTCACTATGATGATATCATTGTGTATAAGGATCAATGCTATGTTGTTGATAAATGGGGAACAATTTCATGGGTTAGTTCGGCTTTGCAGGTGATTCAGTTTGCGCCTCCGCTATATGGGTTTGGCGGGCAGAAGCATTTGGTGGAGTCTTGTGATGATCTTTATGTGGTTGATCAGTACTTTGAAAAGGTGAGTTACCATCACGAGAGGGGGATGGATAATGAATTAATTTTTGGGCACCATCACAATTCCCATTCTGAAGCTGATGCAGTTGATTTTAAAGTTTATAAGTTGGATCAAGAATGGGGTAAATCGGTTAATGTGAGGAACTTGGGAGATCAAGTTTTTATTTTAAGCAATGATGTGTCTTTCTCTGTTTCCGCCAGAGAGTTTGCTGGAGTAAGGGGAAATTGCATTTTTTTTGTTGAACGAGTGGCTTCCCCTGGAAGAGCCAAAAGGGATTACAGTCGTGTGTTCAATTTAGAGGATGGTAGAATTAGGAACCTAGCATCTTGGTGCAGTTCTCAGATGGTCCAACCACCTTCGACTTGGCTCAGCCCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

393

Amino Acids

44.85

Weight (kDa)

6.4

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	82 - 364	1.1e-35	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000246)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44080 AT1G57906 AT1G65735 AT1G65740 AT1G65760 AT1G65770 AT2G17690 AT2G26160 AT3G25750 AT3G25750 AT4G35733
fragaria_vesca	FvH4_1g10810 FvH4_1g10830 FvH4_1g10840 FvH4_1g10840 FvH4_1g10840 FvH4_1g10860 FvH4_1g10880
malus_domestica	MD02G1122000.v1.1 MD15G1235700.v1.1 MD15G1235900.v1.1
prunus_persica	Prupe.7G177000_v2.0.a1 Prupe.7G177100_v2.0.a1 Prupe.7G177200_v2.0.a1 Prupe.7G177300_v2.0.a1 Prupe.7G177400_v2.0.a1 Prupe.7G177400_v2.0.a1
pyrus_communis	pycom02g09500 pycom15g20990 pycom15g21000
rosa_chinensis	RchiOBHm_Chr1g0325601 RchiOBHm_Chr2g0098071 RchiOBHm_Chr2g0098081 RchiOBHm_Chr2g0098091 RchiOBHm_Chr2g0098121 RchiOBHm_Chr2g0098131 RchiOBHm_Chr2g0098151 RchiOBHm_Chr2g0134711 RchiOBHm_Chr3g0456141 RchiOBHm_Chr4g0394811 RchiOBHm_Chr4g0416561 RchiOBHm_Chr5g0014321
rosa_laevigata	RLG00000001178 RLG00000016753 RLG00000016754 RLG00000016755 RLG00000016756 RLG00000016757 RLG00000016758 RLG00000016760 RLG00000016761 RLG00000016762 RLG00000016763
rosa_multiflora	Rmu_co8307469.1_g000001 Rmu_sc0000427.1_g000002 Rmu_sc0002880.1_g000004 Rmu_sc0002880.1_g000007 Rmu_sc0009178.1_g000019 Rmu_sc0013919.1_g000002 Rmu_sc0013919.1_g000003 Rmu_sc0014278.1_g000001 Rmu_sc0031755.1_g000001 Rmu_sc0031755.1_g000002 Rmu_sc0039043.1_g000001 Rmu_sc0039432.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144260 Rroxscaffold_2G00144270 Rroxscaffold_2G00144290 Rroxscaffold_2G00144310 Rroxscaffold_2G00144320 Rroxscaffold_2G00144340 Rroxscaffold_3G00238070
rosa_rugosa	Rorug02G0069800 Rorug02G0069900 Rorug02G0070000 Rorug02G0070100 Rorug02G0070200 Rorug02G0070500 Rorug02G0070500 Rorug05G0053500 Rorug05G0482400 Rorug07G0244200
rosa_samantha	Rh1DG210300 Rh2AG117100 Rh2AG117200 Rh2AG117300 Rh2AG117500 Rh2AG117700 Rh2AG117800 Rh2AG563300 Rh2BG119900 Rh2BG120000 Rh2BG120200 Rh2BG120300 Rh2BG120400 Rh2BG120600 Rh2BG120700 Rh2BG377200 Rh2CG076100 Rh2CG076200 Rh2CG121600 Rh2CG121700 Rh2CG121900 Rh2CG122000 Rh2CG122100 Rh2CG122200 Rh2CG122300 Rh2DG121600 Rh2DG121700 Rh2DG122000 Rh2DG122100 Rh2DG122300 Rh3AG138900 Rh3BG074100 Rh3CG073500 Rh3DG298600 Rh4CG222800 Rh4CG222900 Rh5CG120400 Rh6BG018400 Rh6BG124600 Rh6CG123200 Rh6CG123300 Rh7AG342600 Rh7AG342700 Rh7BG352100 Rh7CG128700 Rh7CG360200 Rh7CG360300
rosa_wichuraiana	Rw2G009150 Rw2G009160 Rw2G009170 Rw2G009200 Rw4G016710 Rw5G035380 Rw6G043260

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	900
AarI	CACCTGC	1 cut(s)	691
Acc36I	ACCTGC	1 cut(s)	691
AccB1I	GGYRCC	2 cut(s)	182, 849
AccBSI	CCGCTC	1 cut(s)	358
AciI	CCGC	6 cut(s)	70, 177, 356, 722, 738, 993
AclWI	GGATC	2 cut(s)	651, 915
AcoI	YGGCCR	1 cut(s)	41
AcsI	RAATTY	1 cut(s)	56
AcuI	CTGAAG	1 cut(s)	891
AcyI	GRCGYC	1 cut(s)	183
AfaI	GTAC	2 cut(s)	365, 791
AfiI	CCNNNNNNNGG	4 cut(s)	15, 50, 360, 728
AflII	CTTAAG	1 cut(s)	440
AgsI	TTSAA	4 cut(s)	394, 797, 1040, 1090
AjnI	CCWGG	1 cut(s)	1054
AjuI	GAANNNNNNNTTGG	2 cut(s)	828, 860
AluBI	AGCT	5 cut(s)	37, 206, 298, 559, 875
AluI	AGCT	5 cut(s)	37, 206, 298, 559, 875
Alw21I	GWGCWC	2 cut(s)	39, 480
Alw44I	GTGCAC	1 cut(s)	476
AlwI	GGATC	2 cut(s)	651, 915
AlwNI	CAGNNNCTG	1 cut(s)	99
AoxI	GGCC	2 cut(s)	41, 192
ApaLI	GTGCAC	1 cut(s)	476
ApeKI	GCWGC	1 cut(s)	93
ApoI	RAATTY	1 cut(s)	56
ArsI	GACNNNNNNTTYG	2 cut(s)	474, 506
AseI	ATTAAT	1 cut(s)	839
Asp700I	GAANNNNTTC	2 cut(s)	389, 676
AspLEI	GCGC	2 cut(s)	185, 718
AspS9I	GGNCC	3 cut(s)	18, 307, 1144
AsuHPI	GGTGA	5 cut(s)	332, 355, 530, 715, 814
AsuII	TTCGAA	1 cut(s)	383
AvaII	GGWCC	3 cut(s)	18, 307, 1144
AxyI	CCTNAGG	1 cut(s)	164
BaeGI	GKGCMC	2 cut(s)	480, 852
BanI	GGYRCC	2 cut(s)	182, 849
BanII	GRGCYC	1 cut(s)	39
BauI	CACGAG	1 cut(s)	815
Bbv12I	GWGCWC	2 cut(s)	39, 480
BbvI	GCAGC	1 cut(s)	105
BccI	CCATC	5 cut(s)	819, 820, 861, 1094, 1135
BciT130I	CCWGG	1 cut(s)	1056
BclI	TGATCA	1 cut(s)	784
BfaI	CTAG	1 cut(s)	1118
BfoI	RGCGCY	1 cut(s)	186
BfrI	CTTAAG	1 cut(s)	440
BfuAI	ACCTGC	1 cut(s)	691
BglI	GCCNNNNNGGC	1 cut(s)	191
BisI	GCNGC	2 cut(s)	70, 94
BlpI	GCTNAGC	1 cut(s)	1166
BlsI	GCNGC	2 cut(s)	71, 95
BmcAI	AGTACT	1 cut(s)	791
Bme1390I	CCNGG	1 cut(s)	1056
Bme18I	GGWCC	3 cut(s)	18, 307, 1144
BmgT120I	GGNCC	3 cut(s)	18, 307, 1144
BmiI	GGNNCC	3 cut(s)	184, 851, 1115
BmrFI	CCNGG	1 cut(s)	1056
BmsI	GCATC	3 cut(s)	81, 868, 1130
BplI	GAGNNNNNCTC	2 cut(s)	596, 628
BpmI	CTGGAG	1 cut(s)	1029
Bpu10I	CCTNAGC	1 cut(s)	359
Bpu1102I	GCTNAGC	1 cut(s)	1166
Bpu14I	TTCGAA	1 cut(s)	383
BpuEI	CTTGAG	1 cut(s)	320
BsaHI	GRCGYC	1 cut(s)	183
BsaJI	CCNNGG	3 cut(s)	30, 284, 1054
BsaWI	WCCGGW	2 cut(s)	317, 340
BsaXI	ACNNNNNCTCC	2 cut(s)	939, 969
Bsc4I	CCNNNNNNNGG	4 cut(s)	15, 50, 360, 728
Bse118I	RCCGGY	2 cut(s)	179, 185
Bse1I	ACTGG	1 cut(s)	405
Bse21I	CCTNAGG	1 cut(s)	164
Bse3DI	GCAATG	1 cut(s)	976
BseBI	CCWGG	1 cut(s)	1056
BseDI	CCNNGG	3 cut(s)	30, 284, 1054
BseGI	GGATG	3 cut(s)	337, 831, 1105
BseLI	CCNNNNNNNGG	4 cut(s)	15, 50, 360, 728
BseMI	GCAATG	1 cut(s)	976
BseMII	CTCAG	3 cut(s)	178, 373, 1151
BseNI	ACTGG	1 cut(s)	405
BseRI	GAGGAG	4 cut(s)	138, 141, 144, 317
BseSI	GKGCMC	2 cut(s)	480, 852
BseXI	GCAGC	1 cut(s)	105
BseYI	CCCAGC	1 cut(s)	559
BsgI	GTGCAG	1 cut(s)	1150
Bsh1285I	CGRYCG	1 cut(s)	259
BshFI	GGCC	2 cut(s)	43, 194
BshNI	GGYRCC	2 cut(s)	182, 849
BsiEI	CGRYCG	1 cut(s)	259
BsiHKAI	GWGCWC	2 cut(s)	39, 480
BsiSI	CCGG	4 cut(s)	180, 186, 318, 341
BslI	CCNNNNNNNGG	4 cut(s)	15, 50, 360, 728
BsnI	GGCC	2 cut(s)	43, 194
Bsp119I	TTCGAA	1 cut(s)	383
Bsp1286I	GDGCHC	3 cut(s)	39, 480, 852
Bsp143I	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
Bsp1720I	GCTNAGC	1 cut(s)	1166
BspACI	CCGC	6 cut(s)	70, 177, 356, 722, 738, 993
BspANI	GGCC	2 cut(s)	43, 194
BspCNI	CTCAG	4 cut(s)	177, 372, 1150, 1179
BspLI	GGNNCC	3 cut(s)	184, 851, 1115
BspMI	ACCTGC	1 cut(s)	691
BspPI	GGATC	2 cut(s)	651, 915
BspQI	GCTCTTC	1 cut(s)	1054
BspT104I	TTCGAA	1 cut(s)	383
BspT107I	GGYRCC	2 cut(s)	182, 849
BspTI	CTTAAG	1 cut(s)	440
BsrBI	CCGCTC	1 cut(s)	358
BsrDI	GCAATG	1 cut(s)	976
BsrFI	RCCGGY	2 cut(s)	179, 185
BsrI	ACTGG	1 cut(s)	405
BssAI	RCCGGY	2 cut(s)	179, 185
BssECI	CCNNGG	3 cut(s)	30, 284, 1054
BssMI	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
BssNI	GRCGYC	1 cut(s)	183
BssSI	CACGAG	1 cut(s)	815
BssT1I	CCWWGG	2 cut(s)	30, 284
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	1 cut(s)	1056
Bst4CI	ACNGT	2 cut(s)	10, 1079
Bst6I	CTCTTC	3 cut(s)	162, 218, 1054
BstACI	GRCGYC	1 cut(s)	183
BstAFI	CTTAAG	1 cut(s)	440
BstAPI	GCANNNNNTGC	1 cut(s)	99
BstBI	TTCGAA	1 cut(s)	383
BstC8I	GCNNGC	4 cut(s)	181, 187, 557, 740
BstDEI	CTNAG	4 cut(s)	164, 359, 1137, 1166
BstEII	GGTNACC	1 cut(s)	343
BstF5I	GGATG	3 cut(s)	337, 831, 1105
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	2 cut(s)	185, 718
BstKTI	GATC	8 cut(s)	25, 48, 259, 646, 772, 787, 910, 952
BstMBI	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
BstMCI	CGRYCG	1 cut(s)	259
BstMWI	GCNNNNNNNGC	3 cut(s)	99, 191, 430
BstNI	CCWGG	1 cut(s)	1056
BstPI	GGTNACC	1 cut(s)	343
BstSCI	CCNGG	1 cut(s)	1054
BstSLI	GKGCMC	2 cut(s)	480, 852
BstV1I	GCAGC	1 cut(s)	105
Bsu36I	CCTNAGG	1 cut(s)	164
BsuRI	GGCC	2 cut(s)	43, 194
BtsCI	GGATG	3 cut(s)	337, 831, 1105
BtsIMutI	CAGTG	1 cut(s)	242
BveI	ACCTGC	1 cut(s)	691
Cac8I	GCNNGC	4 cut(s)	181, 187, 557, 740
CaiI	CAGNNNCTG	1 cut(s)	99
CfoI	GCGC	2 cut(s)	185, 718
Cfr10I	RCCGGY	2 cut(s)	179, 185
Cfr13I	GGNCC	3 cut(s)	18, 307, 1144
CseI	GACGC	1 cut(s)	85
Csp6I	GTAC	2 cut(s)	364, 790
CviAII	CATG	5 cut(s)	235, 434, 493, 596, 681
CviQI	GTAC	2 cut(s)	364, 790
DdeI	CTNAG	4 cut(s)	164, 359, 1137, 1166
DinI	GGCGCC	1 cut(s)	184
DpnI	GATC	8 cut(s)	24, 47, 258, 645, 771, 786, 909, 951
DpnII	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
DraI	TTTAAA	1 cut(s)	892
EaeI	YGGCCR	1 cut(s)	41
Eam1104I	CTCTTC	3 cut(s)	162, 218, 1054
EarI	CTCTTC	3 cut(s)	162, 218, 1054
EciI	GGCGGA	1 cut(s)	982
Ecl136II	GAGCTC	1 cut(s)	37
Eco130I	CCWWGG	2 cut(s)	30, 284
Eco24I	GRGCYC	1 cut(s)	39
Eco32I	GATATC	1 cut(s)	628
Eco47I	GGWCC	3 cut(s)	18, 307, 1144
Eco53kI	GAGCTC	1 cut(s)	37
Eco57I	CTGAAG	1 cut(s)	891
Eco81I	CCTNAGG	1 cut(s)	164
Eco91I	GGTNACC	1 cut(s)	343
EcoICRI	GAGCTC	1 cut(s)	37
EcoO109I	RGGNCCY	1 cut(s)	307
EcoO65I	GGTNACC	1 cut(s)	343
EcoRII	CCWGG	1 cut(s)	1054
EcoRV	GATATC	1 cut(s)	628
EcoT14I	CCWWGG	2 cut(s)	30, 284
EcoT38I	GRGCYC	1 cut(s)	39
EgeI	GGCGCC	1 cut(s)	184
EheI	GGCGCC	1 cut(s)	184
ErhI	CCWWGG	2 cut(s)	30, 284
FaeI	CATG	5 cut(s)	238, 437, 496, 599, 684
FatI	CATG	5 cut(s)	234, 433, 492, 595, 680
FauI	CCCGC	3 cut(s)	184, 363, 731
FbaI	TGATCA	1 cut(s)	784
Fnu4HI	GCNGC	2 cut(s)	70, 94
FokI	GGATG	3 cut(s)	324, 838, 1112
FriOI	GRGCYC	1 cut(s)	39
Fsp4HI	GCNGC	2 cut(s)	70, 94
FspBI	CTAG	1 cut(s)	1118
GlaI	GCGC	2 cut(s)	184, 717
GluI	GCNGC	2 cut(s)	70, 94
GsaI	CCCAGC	1 cut(s)	563
GsuI	CTGGAG	1 cut(s)	1029
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	2 cut(s)	43, 194
HapII	CCGG	4 cut(s)	180, 186, 318, 341
HgaI	GACGC	1 cut(s)	85
HhaI	GCGC	2 cut(s)	185, 718
Hin1I	GRCGYC	1 cut(s)	183
Hin1II	CATG	5 cut(s)	238, 437, 496, 599, 684
Hin6I	GCGC	2 cut(s)	183, 716
HinP1I	GCGC	2 cut(s)	183, 716
HindIII	AAGCTT	1 cut(s)	296
HinfI	GANTC	3 cut(s)	239, 706, 758
HpaII	CCGG	4 cut(s)	180, 186, 318, 341
HphI	GGTGA	5 cut(s)	332, 355, 530, 715, 814
Hpy166II	GTNNAC	2 cut(s)	332, 478
Hpy188I	TCNGA	5 cut(s)	22, 53, 86, 871, 1140
Hpy188III	TCNNGA	2 cut(s)	815, 911
Hpy8I	GTNNAC	2 cut(s)	332, 478
Hpy99I	CGWCG	3 cut(s)	80, 254, 257
HpyAV	CCTTC	3 cut(s)	379, 545, 1164
HpyCH4III	ACNGT	2 cut(s)	10, 1079
HpyCH4IV	ACGT	1 cut(s)	78
HpyCH4V	TGCA	5 cut(s)	478, 700, 881, 1026, 1131
HpyF10VI	GCNNNNNNNGC	3 cut(s)	99, 191, 430
HpyF3I	CTNAG	4 cut(s)	164, 359, 1137, 1166
HpySE526I	ACGT	1 cut(s)	78
Hsp92I	GRCGYC	1 cut(s)	183
Hsp92II	CATG	5 cut(s)	238, 437, 496, 599, 684
HspAI	GCGC	2 cut(s)	183, 716
KasI	GGCGCC	1 cut(s)	182
KroI	GCCGGC	2 cut(s)	179, 185
KroNI	GCCGGC	2 cut(s)	181, 187
Ksp22I	TGATCA	1 cut(s)	784
Kzo9I	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
LguI	GCTCTTC	1 cut(s)	1054
LmnI	GCTCC	1 cut(s)	34
Lsp1109I	GCAGC	1 cut(s)	105
LweI	GCATC	3 cut(s)	81, 868, 1130
MaeI	CTAG	1 cut(s)	1118
MaeII	ACGT	1 cut(s)	78
MaeIII	GTNAC	4 cut(s)	240, 343, 500, 806
MalI	GATC	8 cut(s)	24, 47, 258, 645, 771, 786, 909, 951
MbiI	CCGCTC	1 cut(s)	358
MboI	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
MboII	GAAGA	5 cut(s)	17, 149, 205, 261, 1071
MhlI	GDGCHC	3 cut(s)	39, 480, 852
Mly113I	GGCGCC	1 cut(s)	183
MlyI	GAGTC	2 cut(s)	248, 767
MmeI	TCCRAC	2 cut(s)	885, 1171
MreI	CGCCGGCG	2 cut(s)	179, 185
MroNI	GCCGGC	2 cut(s)	179, 185
MroXI	GAANNNNTTC	2 cut(s)	389, 676
MseI	TTAA	6 cut(s)	312, 441, 839, 891, 930, 965
MslI	CAYNNNNRTG	3 cut(s)	600, 621, 1126
MspCI	CTTAAG	1 cut(s)	440
MspI	CCGG	4 cut(s)	180, 186, 318, 341
MspR9I	CCNGG	1 cut(s)	1056
MvaI	CCWGG	1 cut(s)	1056
MwoI	GCNNNNNNNGC	3 cut(s)	99, 191, 430
NaeI	GCCGGC	2 cut(s)	181, 187
NarI	GGCGCC	1 cut(s)	183
NdeII	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
NgoMIV	GCCGGC	2 cut(s)	179, 185
NlaIII	CATG	5 cut(s)	238, 437, 496, 599, 684
NlaIV	GGNNCC	3 cut(s)	184, 851, 1115
NmuCI	GTSAC	3 cut(s)	240, 343, 500
NspV	TTCGAA	1 cut(s)	383
PaqCI	CACCTGC	1 cut(s)	691
PciSI	GCTCTTC	1 cut(s)	1054
PdiI	GCCGGC	2 cut(s)	181, 187
PdmI	GAANNNNTTC	2 cut(s)	389, 676
PfeI	GAWTC	1 cut(s)	706
PkrI	GCNGC	2 cut(s)	71, 95
Ple19I	CGATCG	1 cut(s)	259
PleI	GAGTC	2 cut(s)	247, 766
PluTI	GGCGCC	1 cut(s)	186
PpsI	GAGTC	2 cut(s)	247, 766
PpuMI	RGGWCCY	1 cut(s)	307
PshBI	ATTAAT	1 cut(s)	839
PsiI	TTATAA	1 cut(s)	900
Psp124BI	GAGCTC	1 cut(s)	39
Psp5II	RGGWCCY	1 cut(s)	307
Psp6I	CCWGG	1 cut(s)	1054
PspEI	GGTNACC	1 cut(s)	343
PspFI	CCCAGC	1 cut(s)	559
PspGI	CCWGG	1 cut(s)	1054
PspN4I	GGNNCC	3 cut(s)	184, 851, 1115
PspPI	GGNCC	3 cut(s)	18, 307, 1144
PspPPI	RGGWCCY	1 cut(s)	307
PstNI	CAGNNNCTG	1 cut(s)	99
PvuI	CGATCG	1 cut(s)	259
RsaI	GTAC	2 cut(s)	365, 791
RsaNI	GTAC	2 cut(s)	364, 790
RseI	CAYNNNNRTG	3 cut(s)	600, 621, 1126
SacI	GAGCTC	1 cut(s)	39
SapI	GCTCTTC	1 cut(s)	1054
SaqAI	TTAA	6 cut(s)	312, 441, 839, 891, 930, 965
SatI	GCNGC	2 cut(s)	70, 94
Sau3AI	GATC	8 cut(s)	22, 45, 256, 643, 769, 784, 907, 949
Sau96I	GGNCC	3 cut(s)	18, 307, 1144
ScaI	AGTACT	1 cut(s)	791
SchI	GAGTC	2 cut(s)	248, 767
ScrFI	CCNGG	1 cut(s)	1056
SduI	GDGCHC	3 cut(s)	39, 480, 852
SfaNI	GCATC	3 cut(s)	81, 868, 1130
SfoI	GGCGCC	1 cut(s)	184
SfuI	TTCGAA	1 cut(s)	383
SgrAI	CRCCGGYG	2 cut(s)	179, 185
SinI	GGWCC	3 cut(s)	18, 307, 1144
SmiMI	CAYNNNNRTG	3 cut(s)	600, 621, 1126
SmlI	CTYRAG	2 cut(s)	299, 440
SmoI	CTYRAG	2 cut(s)	299, 440
SsiI	CCGC	6 cut(s)	70, 177, 356, 722, 738, 993
SspDI	GGCGCC	1 cut(s)	182
SspMI	CTAG	1 cut(s)	1118
SstI	GAGCTC	1 cut(s)	39
StyD4I	CCNGG	1 cut(s)	1054
StyI	CCWWGG	2 cut(s)	30, 284
TaaI	ACNGT	2 cut(s)	10, 1079
TaiI	ACGT	1 cut(s)	81
TaqI	TCGA	3 cut(s)	75, 383, 1157
TaqII	GACCGA	1 cut(s)	263
TatI	WGTACW	1 cut(s)	789
TauI	GCSGC	1 cut(s)	72
TfiI	GAWTC	1 cut(s)	706
Tru1I	TTAA	6 cut(s)	312, 441, 839, 891, 930, 965
Tru9I	TTAA	6 cut(s)	312, 441, 839, 891, 930, 965
TscAI	CASTG	1 cut(s)	249
TseFI	GTSAC	3 cut(s)	240, 343, 500
TseI	GCWGC	1 cut(s)	93
Tsp45I	GTSAC	3 cut(s)	240, 343, 500
TspDTI	ATGAA	3 cut(s)	308, 669, 849
TspRI	CASTG	1 cut(s)	249
Vha464I	CTTAAG	1 cut(s)	440
VneI	GTGCAC	1 cut(s)	476
VpaK11BI	GGWCC	3 cut(s)	18, 307, 1144
VspI	ATTAAT	1 cut(s)	839
XapI	RAATTY	1 cut(s)	56
XcmI	CCANNNNNNNNNTGG	2 cut(s)	512, 1158
XmnI	GAANNNNTTC	2 cut(s)	389, 676
XspI	CTAG	1 cut(s)	1118
ZrmI	AGTACT	1 cut(s)	791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.