Rorug05G0053500

Transcription initiation factor TFIID subunit 8-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000246
Physical Location & Seq
Forward (+)
4634558 .. 4655566
21009 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0053500.1

Sequence Viewer

Length: 942 bp
ATGGATCAAATCCAGCACAAGCACATAACCGTACAAGGCCTGAAGCTACACGTGGCCGACATCGGAACAGGTCCCAATGTAGTCGTGTTCCTACATGGATTCCCAGAAATATGGTACACGTGGCGCCACCAGATGATCGCTCTGGCCAACGCCGGGTTCCGGGCCATAGCCCCGGACTACCGCGGATACGGACTCTCCGACCCGCCTCCCCAACCCGAGAAGGCCACCTTCCTTGACCTTGACAATGACCTCCTTGCTATTCTTGATGCCCTTGCCATTCCTAAGGTTTTCCTCATCGGAAAAGATTTTGGAGCTTGGCCGGCGTACATATTTGCCGGTCTGCATCCAGAAAGGACCTTGGGAGTTGTAACAATGGGAGTGCCATACATGCCAAAGTCAAGTCGTCCCCAATTCATTAACCACCTTCCTGAAGGTTTCTATATTTCAAGATGGCAGGAACCAGGTGGCAGGGCAGAAGCTGATTTTGGACGCCTTGATGCGAAAACAGTTATCCGCAATGTGTACATTCTTTTCTCGAGGAGTAAAATACCAATAGCTGCAGAAAACCAGGAGATCATGGACTTGGTGGACTCGTCTACGCCTCTTCCCCCTTGGTTCACTGAGGAAGATCTTGAAGCATATGGAAAGTTGTACGAGAAATCTGGTTTTCAAACTGCATTGCAACTTCCATATAGGGCAATGAAAGATGGCTTGGGCATACCTGATTCCACTATTGAAGTTCCAGCTCTTTTTATAATGGGAAAAAAGGATTATGTATACGAATTTCCAGGGATGAAAGATTACATAAACAGTGAAAAGCTGAAAGAGTTTGTCCCGGATTTGGAGATTGTATTTCTGCCAGAAGGAACACATTTTGTTCACGAACAATCACCTGAACAAGTTTATGAGCTCATCCTCACCTTCCTCCAAAAGCACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
Bromo_TP TAF8_C

Protein Analysis

313

Amino Acids

35.48

Weight (kDa)

5.29

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 26 - 296 1.2e-24 alpha/beta hydrolase fold
Hydrolase_4 PF12146 27 - 126 3.7e-07 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 28 - 303 2.5e-16 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000246)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G44080 AT1G57906 AT1G65735 AT1G65740 AT1G65760 AT1G65770 AT2G17690 AT2G26160 AT3G25750 AT3G25750 AT4G35733
fragaria_vesca FvH4_1g10810 FvH4_1g10830 FvH4_1g10840 FvH4_1g10840 FvH4_1g10840 FvH4_1g10860 FvH4_1g10880
malus_domestica MD02G1122000.v1.1 MD15G1235700.v1.1 MD15G1235900.v1.1
prunus_persica Prupe.7G177000_v2.0.a1 Prupe.7G177100_v2.0.a1 Prupe.7G177200_v2.0.a1 Prupe.7G177300_v2.0.a1 Prupe.7G177400_v2.0.a1 Prupe.7G177400_v2.0.a1
pyrus_communis pycom02g09500 pycom15g20990 pycom15g21000
rosa_chinensis RchiOBHm_Chr1g0325601 RchiOBHm_Chr2g0098071 RchiOBHm_Chr2g0098081 RchiOBHm_Chr2g0098091 RchiOBHm_Chr2g0098121 RchiOBHm_Chr2g0098131 RchiOBHm_Chr2g0098151 RchiOBHm_Chr2g0134711 RchiOBHm_Chr3g0456141 RchiOBHm_Chr4g0394811 RchiOBHm_Chr4g0416561 RchiOBHm_Chr5g0014321
rosa_laevigata RLG00000001178 RLG00000016753 RLG00000016754 RLG00000016755 RLG00000016756 RLG00000016757 RLG00000016758 RLG00000016760 RLG00000016761 RLG00000016762 RLG00000016763
rosa_multiflora Rmu_co8307469.1_g000001 Rmu_sc0000427.1_g000002 Rmu_sc0002880.1_g000004 Rmu_sc0002880.1_g000007 Rmu_sc0009178.1_g000019 Rmu_sc0013919.1_g000002 Rmu_sc0013919.1_g000003 Rmu_sc0014278.1_g000001 Rmu_sc0031755.1_g000001 Rmu_sc0031755.1_g000002 Rmu_sc0039043.1_g000001 Rmu_sc0039432.1_g000001
rosa_roxburghii Rroxscaffold_2G00144260 Rroxscaffold_2G00144270 Rroxscaffold_2G00144290 Rroxscaffold_2G00144310 Rroxscaffold_2G00144320 Rroxscaffold_2G00144340 Rroxscaffold_3G00238070
rosa_rugosa Rorug02G0069800 Rorug02G0069900 Rorug02G0070000 Rorug02G0070100 Rorug02G0070200 Rorug02G0070500 Rorug02G0070500 Rorug05G0053500 Rorug05G0482400 Rorug07G0244200
rosa_samantha Rh1DG210300 Rh2AG117100 Rh2AG117200 Rh2AG117300 Rh2AG117500 Rh2AG117700 Rh2AG117800 Rh2AG563300 Rh2BG119900 Rh2BG120000 Rh2BG120200 Rh2BG120300 Rh2BG120400 Rh2BG120600 Rh2BG120700 Rh2BG377200 Rh2CG076100 Rh2CG076200 Rh2CG121600 Rh2CG121700 Rh2CG121900 Rh2CG122000 Rh2CG122100 Rh2CG122200 Rh2CG122300 Rh2DG121600 Rh2DG121700 Rh2DG122000 Rh2DG122100 Rh2DG122300 Rh3AG138900 Rh3BG074100 Rh3CG073500 Rh3DG298600 Rh4CG222800 Rh4CG222900 Rh5CG120400 Rh6BG018400 Rh6BG124600 Rh6CG123200 Rh6CG123300 Rh7AG342600 Rh7AG342700 Rh7BG352100 Rh7CG128700 Rh7CG360200 Rh7CG360300
rosa_wichuraiana Rw2G009150 Rw2G009160 Rw2G009170 Rw2G009200 Rw4G016710 Rw5G035380 Rw6G043260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 755
AccB1I GGYRCC 1 cut(s) 123
AccI GTMKAC 2 cut(s) 596, 777
AccII CGCG 1 cut(s) 183
AciI CCGC 4 cut(s) 181, 183, 203, 514
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 54, 144, 317
AcsI RAATTY 1 cut(s) 782
AcuI CTGAAG 2 cut(s) 62, 450
AcvI CACGTG 2 cut(s) 52, 120
AcyI GRCGYC 2 cut(s) 124, 490
AfaI GTAC 5 cut(s) 33, 116, 326, 524, 653
AfiI CCNNNNNNNGG 3 cut(s) 153, 159, 841
AflIII ACRYGT 2 cut(s) 49, 117
AgsI TTSAA 4 cut(s) 447, 635, 671, 737
AjnI CCWGG 3 cut(s) 460, 567, 787
AjuI GAANNNNNNNTTGG 6 cut(s) 140, 172, 468, 500, 695, 727
AluBI AGCT 7 cut(s) 46, 314, 479, 557, 746, 820, 910
AluI AGCT 7 cut(s) 46, 314, 479, 557, 746, 820, 910
Alw21I GWGCWC 1 cut(s) 912
AlwI GGATC 1 cut(s) 12
AlwNI CAGNNNCTG 1 cut(s) 479
Ama87I CYCGRG 2 cut(s) 215, 535
AoxI GGCC 6 cut(s) 37, 54, 144, 162, 222, 317
ApeKI GCWGC 1 cut(s) 557
ApoI RAATTY 1 cut(s) 782
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 3 cut(s) 71, 162, 354
AsuC2I CCSGG 4 cut(s) 154, 161, 173, 836
AsuHPI GGTGA 2 cut(s) 882, 910
AvaI CYCGRG 2 cut(s) 215, 535
AvaII GGWCC 2 cut(s) 71, 354
AxyI CCTNAGG 1 cut(s) 282
BalI TGGCCA 1 cut(s) 146
BanI GGYRCC 1 cut(s) 123
BanII GRGCYC 1 cut(s) 912
BbrPI CACGTG 2 cut(s) 52, 120
Bbv12I GWGCWC 1 cut(s) 912
BbvI GCAGC 1 cut(s) 544
BccI CCATC 2 cut(s) 444, 701
BciT130I CCWGG 3 cut(s) 462, 569, 789
BciVI GTATCC 1 cut(s) 179
BcnI CCSGG 4 cut(s) 154, 161, 173, 836
BfmI CTRYAG 1 cut(s) 558
BfoI RGCGCY 1 cut(s) 127
BfuI GTATCC 1 cut(s) 179
BglII AGATCT 1 cut(s) 628
BisI GCNGC 1 cut(s) 558
BlsI GCNGC 1 cut(s) 559
Bme1390I CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
Bme18I GGWCC 2 cut(s) 71, 354
BmeT110I CYCGRG 2 cut(s) 215, 535
BmgT120I GGNCC 3 cut(s) 71, 162, 354
BmiI GGNNCC 4 cut(s) 73, 125, 158, 459
BmrFI CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
BmsI GCATC 3 cut(s) 256, 352, 487
BpuMI CCSGG 4 cut(s) 154, 161, 173, 836
BsaAI YACGTR 2 cut(s) 52, 120
BsaHI GRCGYC 2 cut(s) 124, 490
BsaJI CCNNGG 5 cut(s) 171, 181, 357, 611, 788
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 3 cut(s) 153, 159, 841
Bse118I RCCGGY 2 cut(s) 319, 335
Bse21I CCTNAGG 1 cut(s) 282
Bse3DI GCAATG 3 cut(s) 523, 677, 705
BseBI CCWGG 3 cut(s) 462, 569, 789
BseDI CCNNGG 5 cut(s) 171, 181, 357, 611, 788
BseGI GGATG 3 cut(s) 343, 798, 912
BseLI CCNNNNNNNGG 3 cut(s) 153, 159, 841
BseMI GCAATG 3 cut(s) 523, 677, 705
BseMII CTCAG 1 cut(s) 612
BseRI GAGGAG 1 cut(s) 553
BseXI GCAGC 1 cut(s) 544
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BshNI GGYRCC 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 912
BsiHKCI CYCGRG 2 cut(s) 215, 535
BsiSI CCGG 6 cut(s) 153, 160, 173, 320, 336, 836
BslFI GGGAC 3 cut(s) 57, 390, 818
BslI CCNNNNNNNGG 3 cut(s) 153, 159, 841
BsmFI GGGAC 3 cut(s) 57, 390, 818
BsnI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BsoBI CYCGRG 2 cut(s) 215, 535
Bsp1286I GDGCHC 1 cut(s) 912
Bsp1407I TGTACA 1 cut(s) 522
Bsp143I GATC 4 cut(s) 4, 135, 573, 628
BspACI CCGC 4 cut(s) 181, 183, 203, 514
BspANI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BspCNI CTCAG 1 cut(s) 613
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 4 cut(s) 73, 125, 158, 459
BspMAI CTGCAG 1 cut(s) 562
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 123
BsrDI GCAATG 3 cut(s) 523, 677, 705
BsrFI RCCGGY 2 cut(s) 319, 335
BsrGI TGTACA 1 cut(s) 522
BssAI RCCGGY 2 cut(s) 319, 335
BssECI CCNNGG 5 cut(s) 171, 181, 357, 611, 788
BssMI GATC 4 cut(s) 4, 135, 573, 628
BssNAI GTATAC 1 cut(s) 778
BssNI GRCGYC 2 cut(s) 124, 490
BssT1I CCWWGG 2 cut(s) 357, 611
Bst1107I GTATAC 1 cut(s) 778
Bst2UI CCWGG 3 cut(s) 462, 569, 789
Bst4CI ACNGT 3 cut(s) 31, 508, 812
Bst6I CTCTTC 1 cut(s) 609
BstACI GRCGYC 2 cut(s) 124, 490
BstAUI TGTACA 1 cut(s) 522
BstBAI YACGTR 2 cut(s) 52, 120
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 282, 621
BstDSI CCRYGG 1 cut(s) 181
BstF5I GGATG 3 cut(s) 343, 798, 912
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 127
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 4 cut(s) 7, 138, 576, 631
BstMBI GATC 4 cut(s) 4, 135, 573, 628
BstMWI GCNNNNNNNGC 2 cut(s) 320, 388
BstNI CCWGG 3 cut(s) 462, 569, 789
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 7 cut(s) 152, 159, 171, 460, 567, 787, 834
BstSFI CTRYAG 1 cut(s) 558
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 1 cut(s) 544
BstX2I RGATCY 1 cut(s) 628
BstXI CCANNNNNNTGG 1 cut(s) 111
BstYI RGATCY 1 cut(s) 628
BstZ17I GTATAC 1 cut(s) 778
Bsu36I CCTNAGG 1 cut(s) 282
BsuI GTATCC 1 cut(s) 179
BsuRI GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
BtgI CCRYGG 1 cut(s) 181
BtsCI GGATG 3 cut(s) 343, 798, 912
BtsIMutI CAGTG 2 cut(s) 618, 817
Cac8I GCNNGC 1 cut(s) 321
CaiI CAGNNNCTG 1 cut(s) 479
CfoI GCGC 1 cut(s) 126
Cfr10I RCCGGY 2 cut(s) 319, 335
Cfr13I GGNCC 3 cut(s) 71, 162, 354
Cfr42I CCGCGG 1 cut(s) 184
CseI GACGC 1 cut(s) 498
CsiI ACCWGGT 1 cut(s) 460
Csp6I GTAC 5 cut(s) 32, 115, 325, 523, 652
CspCI CAANNNNNGTGG 2 cut(s) 214, 249
CviAII CATG 3 cut(s) 95, 388, 577
CviQI GTAC 5 cut(s) 32, 115, 325, 523, 652
DdeI CTNAG 2 cut(s) 282, 621
DinI GGCGCC 1 cut(s) 125
DpnI GATC 4 cut(s) 6, 137, 575, 630
DpnII GATC 4 cut(s) 4, 135, 573, 628
EaeI YGGCCR 3 cut(s) 54, 144, 317
Eam1104I CTCTTC 1 cut(s) 609
EarI CTCTTC 1 cut(s) 609
Ecl136II GAGCTC 1 cut(s) 910
Eco130I CCWWGG 2 cut(s) 357, 611
Eco147I AGGCCT 1 cut(s) 39
Eco24I GRGCYC 1 cut(s) 912
Eco47I GGWCC 2 cut(s) 71, 354
Eco53kI GAGCTC 1 cut(s) 910
Eco57I CTGAAG 2 cut(s) 62, 450
Eco72I CACGTG 2 cut(s) 52, 120
Eco81I CCTNAGG 1 cut(s) 282
Eco88I CYCGRG 2 cut(s) 215, 535
EcoICRI GAGCTC 1 cut(s) 910
EcoO109I RGGNCCY 2 cut(s) 71, 354
EcoRII CCWGG 3 cut(s) 460, 567, 787
EcoT14I CCWWGG 2 cut(s) 357, 611
EcoT38I GRGCYC 1 cut(s) 912
EgeI GGCGCC 1 cut(s) 125
EheI GGCGCC 1 cut(s) 125
ErhI CCWWGG 2 cut(s) 357, 611
FaeI CATG 3 cut(s) 98, 391, 580
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 3 cut(s) 57, 390, 818
FatI CATG 3 cut(s) 94, 387, 576
FauI CCCGC 1 cut(s) 210
FauNDI CATATG 1 cut(s) 640
FblI GTMKAC 2 cut(s) 596, 777
Fnu4HI GCNGC 1 cut(s) 558
FokI GGATG 3 cut(s) 330, 805, 899
FriOI GRGCYC 1 cut(s) 912
Fsp4HI GCNGC 1 cut(s) 558
GlaI GCGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 558
HaeII RGCGCY 1 cut(s) 127
HaeIII GGCC 6 cut(s) 39, 56, 146, 164, 224, 319
HapII CCGG 6 cut(s) 153, 160, 173, 320, 336, 836
HgaI GACGC 1 cut(s) 498
HhaI GCGC 1 cut(s) 126
Hin1I GRCGYC 2 cut(s) 124, 490
Hin1II CATG 3 cut(s) 98, 391, 580
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HinfI GANTC 4 cut(s) 99, 192, 590, 725
HpaII CCGG 6 cut(s) 153, 160, 173, 320, 336, 836
HphI GGTGA 2 cut(s) 882, 910
Hpy166II GTNNAC 7 cut(s) 117, 523, 589, 597, 618, 778, 880
Hpy188I TCNGA 3 cut(s) 65, 199, 299
Hpy188III TCNNGA 7 cut(s) 263, 347, 428, 447, 535, 632, 881
Hpy8I GTNNAC 7 cut(s) 117, 523, 589, 597, 618, 778, 880
HpyAV CCTTC 6 cut(s) 214, 238, 425, 434, 857, 931
HpyCH4III ACNGT 3 cut(s) 31, 508, 812
HpyCH4IV ACGT 2 cut(s) 51, 119
HpyCH4V TGCA 4 cut(s) 343, 560, 677, 682
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 388
HpyF3I CTNAG 2 cut(s) 282, 621
HpySE526I ACGT 2 cut(s) 51, 119
Hsp92I GRCGYC 2 cut(s) 124, 490
Hsp92II CATG 3 cut(s) 98, 391, 580
HspAI GCGC 1 cut(s) 124
KasI GGCGCC 1 cut(s) 123
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
KspI CCGCGG 1 cut(s) 184
Kzo9I GATC 4 cut(s) 4, 135, 573, 628
LmnI GCTCC 1 cut(s) 311
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 3 cut(s) 256, 352, 487
MabI ACCWGGT 1 cut(s) 460
MaeII ACGT 2 cut(s) 51, 119
MaeIII GTNAC 1 cut(s) 367
MalI GATC 4 cut(s) 6, 137, 575, 630
MboI GATC 4 cut(s) 4, 135, 573, 628
MboII GAAGA 2 cut(s) 596, 638
MflI RGATCY 1 cut(s) 628
MhlI GDGCHC 1 cut(s) 912
MlsI TGGCCA 1 cut(s) 146
MluCI AATT 2 cut(s) 410, 782
MluNI TGGCCA 1 cut(s) 146
Mly113I GGCGCC 1 cut(s) 124
MlyI GAGTC 2 cut(s) 186, 584
MmeI TCCRAC 1 cut(s) 222
MnlI CCTC 8 cut(s) 216, 260, 302, 531, 612, 616, 926, 935
Mox20I TGGCCA 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 146
MseI TTAA 1 cut(s) 417
Msp20I TGGCCA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 183
MspI CCGG 6 cut(s) 153, 160, 173, 320, 336, 836
MspR9I CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
MvaI CCWGG 3 cut(s) 462, 569, 789
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 2 cut(s) 320, 388
NaeI GCCGGC 1 cut(s) 321
NarI GGCGCC 1 cut(s) 124
NciI CCSGG 4 cut(s) 154, 161, 173, 836
NdeI CATATG 1 cut(s) 640
NdeII GATC 4 cut(s) 4, 135, 573, 628
NgoMIV GCCGGC 1 cut(s) 319
NlaIII CATG 3 cut(s) 98, 391, 580
NlaIV GGNNCC 4 cut(s) 73, 125, 158, 459
NspI RCATGY 1 cut(s) 391
PaeR7I CTCGAG 1 cut(s) 535
PceI AGGCCT 1 cut(s) 39
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PdiI GCCGGC 1 cut(s) 321
PfeI GAWTC 2 cut(s) 99, 725
PfoI TCCNGGA 1 cut(s) 834
PkrI GCNGC 1 cut(s) 559
PleI GAGTC 2 cut(s) 186, 584
PluTI GGCGCC 1 cut(s) 127
PmaCI CACGTG 2 cut(s) 52, 120
PmlI CACGTG 2 cut(s) 52, 120
PpsI GAGTC 2 cut(s) 186, 584
Ppu21I YACGTR 2 cut(s) 52, 120
PpuMI RGGWCCY 2 cut(s) 71, 354
PsiI TTATAA 1 cut(s) 755
Psp124BI GAGCTC 1 cut(s) 912
Psp5II RGGWCCY 2 cut(s) 71, 354
Psp6I CCWGG 3 cut(s) 460, 567, 787
PspCI CACGTG 2 cut(s) 52, 120
PspGI CCWGG 3 cut(s) 460, 567, 787
PspN4I GGNNCC 4 cut(s) 73, 125, 158, 459
PspPI GGNCC 3 cut(s) 71, 162, 354
PspPPI RGGWCCY 2 cut(s) 71, 354
PstI CTGCAG 1 cut(s) 562
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 1 cut(s) 628
RsaI GTAC 5 cut(s) 33, 116, 326, 524, 653
RsaNI GTAC 5 cut(s) 32, 115, 325, 523, 652
SacI GAGCTC 1 cut(s) 912
SacII CCGCGG 1 cut(s) 184
SaqAI TTAA 1 cut(s) 417
SatI GCNGC 1 cut(s) 558
Sau3AI GATC 4 cut(s) 4, 135, 573, 628
Sau96I GGNCC 3 cut(s) 71, 162, 354
SchI GAGTC 2 cut(s) 186, 584
ScrFI CCNGG 7 cut(s) 154, 161, 173, 462, 569, 789, 836
SduI GDGCHC 1 cut(s) 912
SexAI ACCWGGT 1 cut(s) 460
SfaNI GCATC 3 cut(s) 256, 352, 487
SfcI CTRYAG 1 cut(s) 558
SfoI GGCGCC 1 cut(s) 125
Sfr274I CTCGAG 1 cut(s) 535
Sfr303I CCGCGG 1 cut(s) 184
SgrBI CCGCGG 1 cut(s) 184
SinI GGWCC 2 cut(s) 71, 354
SlaI CTCGAG 1 cut(s) 535
SmlI CTYRAG 1 cut(s) 535
SmoI CTYRAG 1 cut(s) 535
Sse9I AATT 2 cut(s) 410, 782
SseBI AGGCCT 1 cut(s) 39
SsiI CCGC 4 cut(s) 181, 183, 203, 514
SspDI GGCGCC 1 cut(s) 123
SstI GAGCTC 1 cut(s) 912
StuI AGGCCT 1 cut(s) 39
StyD4I CCNGG 7 cut(s) 152, 159, 171, 460, 567, 787, 834
StyI CCWWGG 2 cut(s) 357, 611
TaaI ACNGT 3 cut(s) 31, 508, 812
TaiI ACGT 2 cut(s) 54, 122
TaqI TCGA 1 cut(s) 536
TasI AATT 2 cut(s) 410, 782
TatI WGTACW 1 cut(s) 522
TfiI GAWTC 2 cut(s) 99, 725
Tru1I TTAA 1 cut(s) 417
Tru9I TTAA 1 cut(s) 417
TscAI CASTG 2 cut(s) 625, 817
TseI GCWGC 1 cut(s) 557
TspDTI ATGAA 3 cut(s) 403, 716, 809
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 2 cut(s) 625, 817
VpaK11BI GGWCC 2 cut(s) 71, 354
XapI RAATTY 1 cut(s) 782
XceI RCATGY 1 cut(s) 391
XhoI CTCGAG 1 cut(s) 535
XmiI GTMKAC 2 cut(s) 596, 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.