Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000246

Physical Location & Seq

Genomic Coordinates Forward (+)

10145021 .. 10150656

Gene Structure 5636 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG121600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGCTTGGACTTACCTTCAATCTGGGCCTCATCTTACATCCTTTTTGGTCAATGAGTCAACCCACCGATATATTCGTACTCAGACTACTCACTGTGAAAAAGTCTCCAATGGACACCGTGAAATGGTCCAATCTTCCCAAGGAGCTCTGGCCGATCATCGGAAAATTCCTCCATAGCCGCATCGACGTTCTCCGATTTCGCAGCGTCTGCTCTATATGGCGTTCCTCTCGCCCTCCTTTCCAGCGACCTCCAGCTCCTCCTCGTCCTGCCCTCAGGTTCTCTCCCGCCGCCGCCGGCGAGGCCAAAAGCGAAGCTCTACTCTTCCAAAGCACAACCTATCGCATGGAGTCACTGACCGACGACGATCGTTGTTGTTCTTCACAATCAAAGCCTTGGTTGATGCAGCTTGAGGAGGACCTTAATTCCGGTGAAATGCGTTTACTACATCCGGTGACCAATTCCCCGCTCAGGTACTCCCCTAATTCTACTTCGATGGTGTTCAACTTACTGGACTTTCGGCTTGTTGAGTTGCGAAAATCGCATGGTCTTAAGTTTGGCAAGAACAATGTTGATCTCAAGTCTGTGCACAAATTGGTAGTCATGCCTTGTGACCATTTGGGTTTTGGTGATGAGTGTGTGATGTTTATGCTATATAACGAAGGCAAGCTGGGTTTTGCGAGATTTGGAGATGAGAAACTGACCCATGTAGATGAACAAAACTCTCACTATGATGATATCATTGTGTATAAGGATCAATGCTATGTTGTTGATAAATGGGGAACAATTTCATGGGTTAGTTCGGCTCTGCAGGTGATTCAGTTTTCGCCTCCGCTATGTGGGTTTGGCGGGCGGAAGTATTTGGTGGAATGTCGTGATGATCTTTATGTGGTTGATCAGTTCTTTGAAAAGGTGACTCAGCAGAGCAATATAGTAGGGACCCCATTTCTGGATAATGAGTTACTTTGGTGGCATTATCATAAAATGCGTTCTGATGCAGAATCAATTGATTTCAAGGCTTATAAGCTGGATCAAGAATGGGGTAAATGGGTCGATGTGAAAGACATGGGAGATGACATCTTTATTTTAAGCAATGATGGATCTTTCTCTGTCTCCGCCAAAGAGTTTGCTGGAGTGAAGGGAAATTGCATTTTCTTTACTGAAAGTGCGTTAACTACTGGAAGGTTGTACCCTTGTGTGTTCAATTTAGAGGATGGTTTGTTTAGCAAGGCATCTTTGCGCTGTCCACAAATGGTCCATCCACCTTCAAGTTGGCTCAGCCCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

428

Amino Acids

49.04

Weight (kDa)

6.28

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	113 - 401	1.9e-36	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000246)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44080 AT1G57906 AT1G65735 AT1G65740 AT1G65760 AT1G65770 AT2G17690 AT2G26160 AT3G25750 AT3G25750 AT4G35733
fragaria_vesca	FvH4_1g10810 FvH4_1g10830 FvH4_1g10840 FvH4_1g10840 FvH4_1g10840 FvH4_1g10860 FvH4_1g10880
malus_domestica	MD02G1122000.v1.1 MD15G1235700.v1.1 MD15G1235900.v1.1
prunus_persica	Prupe.7G177000_v2.0.a1 Prupe.7G177100_v2.0.a1 Prupe.7G177200_v2.0.a1 Prupe.7G177300_v2.0.a1 Prupe.7G177400_v2.0.a1 Prupe.7G177400_v2.0.a1
pyrus_communis	pycom02g09500 pycom15g20990 pycom15g21000
rosa_chinensis	RchiOBHm_Chr1g0325601 RchiOBHm_Chr2g0098071 RchiOBHm_Chr2g0098081 RchiOBHm_Chr2g0098091 RchiOBHm_Chr2g0098121 RchiOBHm_Chr2g0098131 RchiOBHm_Chr2g0098151 RchiOBHm_Chr2g0134711 RchiOBHm_Chr3g0456141 RchiOBHm_Chr4g0394811 RchiOBHm_Chr4g0416561 RchiOBHm_Chr5g0014321
rosa_laevigata	RLG00000001178 RLG00000016753 RLG00000016754 RLG00000016755 RLG00000016756 RLG00000016757 RLG00000016758 RLG00000016760 RLG00000016761 RLG00000016762 RLG00000016763
rosa_multiflora	Rmu_co8307469.1_g000001 Rmu_sc0000427.1_g000002 Rmu_sc0002880.1_g000004 Rmu_sc0002880.1_g000007 Rmu_sc0009178.1_g000019 Rmu_sc0013919.1_g000002 Rmu_sc0013919.1_g000003 Rmu_sc0014278.1_g000001 Rmu_sc0031755.1_g000001 Rmu_sc0031755.1_g000002 Rmu_sc0039043.1_g000001 Rmu_sc0039432.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144260 Rroxscaffold_2G00144270 Rroxscaffold_2G00144290 Rroxscaffold_2G00144310 Rroxscaffold_2G00144320 Rroxscaffold_2G00144340 Rroxscaffold_3G00238070
rosa_rugosa	Rorug02G0069800 Rorug02G0069900 Rorug02G0070000 Rorug02G0070100 Rorug02G0070200 Rorug02G0070500 Rorug02G0070500 Rorug05G0053500 Rorug05G0482400 Rorug07G0244200
rosa_samantha	Rh1DG210300 Rh2AG117100 Rh2AG117200 Rh2AG117300 Rh2AG117500 Rh2AG117700 Rh2AG117800 Rh2AG563300 Rh2BG119900 Rh2BG120000 Rh2BG120200 Rh2BG120300 Rh2BG120400 Rh2BG120600 Rh2BG120700 Rh2BG377200 Rh2CG076100 Rh2CG076200 Rh2CG121600 Rh2CG121700 Rh2CG121900 Rh2CG122000 Rh2CG122100 Rh2CG122200 Rh2CG122300 Rh2DG121600 Rh2DG121700 Rh2DG122000 Rh2DG122100 Rh2DG122300 Rh3AG138900 Rh3BG074100 Rh3CG073500 Rh3DG298600 Rh4CG222800 Rh4CG222900 Rh5CG120400 Rh6BG018400 Rh6BG124600 Rh6CG123200 Rh6CG123300 Rh7AG342600 Rh7AG342700 Rh7BG352100 Rh7CG128700 Rh7CG360200 Rh7CG360300
rosa_wichuraiana	Rw2G009150 Rw2G009160 Rw2G009170 Rw2G009200 Rw4G016710 Rw5G035380 Rw6G043260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1020
AarI	CACCTGC	1 cut(s)	799
Acc36I	ACCTGC	1 cut(s)	799
AccBSI	CCGCTC	1 cut(s)	466
AciI	CCGC	9 cut(s)	178, 285, 288, 291, 464, 830, 846, 850, 1113
AclWI	GGATC	3 cut(s)	759, 1035, 1105
AcoI	YGGCCR	1 cut(s)	149
AcsI	RAATTY	1 cut(s)	164
AfaI	GTAC	3 cut(s)	78, 473, 1187
AfiI	CCNNNNNNNGG	5 cut(s)	123, 158, 468, 836, 946
AflII	CTTAAG	1 cut(s)	548
AgsI	TTSAA	6 cut(s)	19, 502, 905, 1012, 1201, 1266
AluBI	AGCT	6 cut(s)	145, 254, 314, 406, 667, 1024
AluI	AGCT	6 cut(s)	145, 254, 314, 406, 667, 1024
Alw21I	GWGCWC	2 cut(s)	147, 588
Alw26I	GTCTC	2 cut(s)	108, 1114
Alw44I	GTGCAC	1 cut(s)	584
AlwI	GGATC	3 cut(s)	759, 1035, 1105
AlwNI	CAGNNNCTG	1 cut(s)	207
AoxI	GGCC	3 cut(s)	25, 149, 300
ApaLI	GTGCAC	1 cut(s)	584
ApeKI	GCWGC	2 cut(s)	201, 403
ApoI	RAATTY	1 cut(s)	164
ArsI	GACNNNNNNTTYG	2 cut(s)	582, 614
Asp700I	GAANNNNTTC	1 cut(s)	784
AspLEI	GCGC	1 cut(s)	1239
AspS9I	GGNCC	5 cut(s)	25, 126, 415, 936, 1252
AsuHPI	GGTGA	5 cut(s)	440, 463, 638, 823, 922
AvaII	GGWCC	4 cut(s)	126, 415, 936, 1252
AxyI	CCTNAGG	1 cut(s)	272
BaeGI	GKGCMC	1 cut(s)	588
BanII	GRGCYC	1 cut(s)	147
Bbv12I	GWGCWC	2 cut(s)	147, 588
BbvI	GCAGC	2 cut(s)	213, 415
BccI	CCATC	4 cut(s)	487, 1088, 1205, 1263
BclI	TGATCA	1 cut(s)	892
BcoDI	GTCTC	2 cut(s)	108, 1114
BfmI	CTRYAG	1 cut(s)	806
BfrI	CTTAAG	1 cut(s)	548
BfuAI	ACCTGC	1 cut(s)	799
BglI	GCCNNNNNGGC	1 cut(s)	299
BisI	GCNGC	5 cut(s)	178, 202, 288, 291, 404
BlpI	GCTNAGC	1 cut(s)	1274
BlsI	GCNGC	5 cut(s)	179, 203, 289, 292, 405
Bme18I	GGWCC	4 cut(s)	126, 415, 936, 1252
BmgT120I	GGNCC	5 cut(s)	25, 126, 415, 936, 1252
BmiI	GGNNCC	2 cut(s)	937, 938
BmsI	GCATC	4 cut(s)	189, 390, 982, 1238
BpmI	CTGGAG	2 cut(s)	234, 1149
Bpu10I	CCTNAGC	1 cut(s)	467
Bpu1102I	GCTNAGC	1 cut(s)	1274
BpuEI	CTTGAG	2 cut(s)	428, 560
BsaJI	CCNNGG	2 cut(s)	138, 392
BsaWI	WCCGGW	2 cut(s)	425, 448
Bsc4I	CCNNNNNNNGG	5 cut(s)	123, 158, 468, 836, 946
Bse118I	RCCGGY	1 cut(s)	293
Bse1I	ACTGG	2 cut(s)	513, 1180
Bse21I	CCTNAGG	1 cut(s)	272
Bse3DI	GCAATG	1 cut(s)	1096
BseDI	CCNNGG	2 cut(s)	138, 392
BseGI	GGATG	4 cut(s)	37, 445, 1216, 1255
BseLI	CCNNNNNNNGG	5 cut(s)	123, 158, 468, 836, 946
BseMI	GCAATG	1 cut(s)	1096
BseMII	CTCAG	4 cut(s)	94, 286, 481, 929
BseNI	ACTGG	2 cut(s)	513, 1180
BseRI	GAGGAG	3 cut(s)	246, 249, 425
BseSI	GKGCMC	1 cut(s)	588
BseXI	GCAGC	2 cut(s)	213, 415
BseYI	CCCAGC	1 cut(s)	667
Bsh1285I	CGRYCG	1 cut(s)	367
BshFI	GGCC	3 cut(s)	27, 151, 302
BsiEI	CGRYCG	1 cut(s)	367
BsiHKAI	GWGCWC	2 cut(s)	147, 588
BsiSI	CCGG	3 cut(s)	294, 426, 449
BslFI	GGGAC	1 cut(s)	949
BslI	CCNNNNNNNGG	5 cut(s)	123, 158, 468, 836, 946
BsmAI	GTCTC	2 cut(s)	108, 1114
BsmFI	GGGAC	1 cut(s)	949
BsnI	GGCC	3 cut(s)	27, 151, 302
Bsp1286I	GDGCHC	2 cut(s)	147, 588
Bsp143I	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
Bsp1720I	GCTNAGC	1 cut(s)	1274
BspACI	CCGC	9 cut(s)	178, 285, 288, 291, 464, 830, 846, 850, 1113
BspANI	GGCC	3 cut(s)	27, 151, 302
BspCNI	CTCAG	5 cut(s)	93, 285, 480, 928, 1287
BspLI	GGNNCC	2 cut(s)	937, 938
BspMAI	CTGCAG	1 cut(s)	810
BspMI	ACCTGC	1 cut(s)	799
BspPI	GGATC	3 cut(s)	759, 1035, 1105
BspTI	CTTAAG	1 cut(s)	548
BsrBI	CCGCTC	1 cut(s)	466
BsrDI	GCAATG	1 cut(s)	1096
BsrFI	RCCGGY	1 cut(s)	293
BsrI	ACTGG	2 cut(s)	513, 1180
BssAI	RCCGGY	1 cut(s)	293
BssECI	CCNNGG	2 cut(s)	138, 392
BssMI	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
BssT1I	CCWWGG	2 cut(s)	138, 392
Bst4CI	ACNGT	2 cut(s)	94, 118
Bst6I	CTCTTC	1 cut(s)	326
BstAFI	CTTAAG	1 cut(s)	548
BstAPI	GCANNNNNTGC	1 cut(s)	207
BstC8I	GCNNGC	3 cut(s)	295, 665, 848
BstDEI	CTNAG	5 cut(s)	80, 272, 467, 915, 1274
BstEII	GGTNACC	1 cut(s)	451
BstF5I	GGATG	4 cut(s)	37, 445, 1216, 1255
BstHHI	GCGC	1 cut(s)	1239
BstKTI	GATC	8 cut(s)	156, 367, 574, 754, 880, 895, 1030, 1100
BstMAI	GTCTC	2 cut(s)	108, 1114
BstMBI	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
BstMCI	CGRYCG	1 cut(s)	367
BstMWI	GCNNNNNNNGC	3 cut(s)	207, 299, 538
BstPI	GGTNACC	1 cut(s)	451
BstSFI	CTRYAG	1 cut(s)	806
BstSLI	GKGCMC	1 cut(s)	588
BstV1I	GCAGC	2 cut(s)	213, 415
BstX2I	RGATCY	1 cut(s)	1097
BstYI	RGATCY	1 cut(s)	1097
Bsu36I	CCTNAGG	1 cut(s)	272
BsuRI	GGCC	3 cut(s)	27, 151, 302
BtsCI	GGATG	4 cut(s)	37, 445, 1216, 1255
BtsIMutI	CAGTG	2 cut(s)	90, 350
BveI	ACCTGC	1 cut(s)	799
Cac8I	GCNNGC	3 cut(s)	295, 665, 848
CaiI	CAGNNNCTG	1 cut(s)	207
CfoI	GCGC	1 cut(s)	1239
Cfr10I	RCCGGY	1 cut(s)	293
Cfr13I	GGNCC	5 cut(s)	25, 126, 415, 936, 1252
CseI	GACGC	1 cut(s)	193
Csp6I	GTAC	3 cut(s)	77, 472, 1186
CviAII	CATG	6 cut(s)	343, 542, 601, 704, 789, 1063
CviQI	GTAC	3 cut(s)	77, 472, 1186
DdeI	CTNAG	5 cut(s)	80, 272, 467, 915, 1274
DpnI	GATC	8 cut(s)	155, 366, 573, 753, 879, 894, 1029, 1099
DpnII	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
EaeI	YGGCCR	1 cut(s)	149
Eam1104I	CTCTTC	1 cut(s)	326
EarI	CTCTTC	1 cut(s)	326
EciI	GGCGGA	2 cut(s)	865, 1102
Ecl136II	GAGCTC	1 cut(s)	145
Eco130I	CCWWGG	2 cut(s)	138, 392
Eco24I	GRGCYC	1 cut(s)	147
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	4 cut(s)	126, 415, 936, 1252
Eco53kI	GAGCTC	1 cut(s)	145
Eco81I	CCTNAGG	1 cut(s)	272
Eco91I	GGTNACC	1 cut(s)	451
EcoICRI	GAGCTC	1 cut(s)	145
EcoO109I	RGGNCCY	2 cut(s)	415, 936
EcoO65I	GGTNACC	1 cut(s)	451
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	2 cut(s)	138, 392
EcoT38I	GRGCYC	1 cut(s)	147
ErhI	CCWWGG	2 cut(s)	138, 392
FaeI	CATG	6 cut(s)	346, 545, 604, 707, 792, 1066
FaqI	GGGAC	1 cut(s)	949
FatI	CATG	6 cut(s)	342, 541, 600, 703, 788, 1062
FauI	CCCGC	3 cut(s)	292, 471, 839
FbaI	TGATCA	1 cut(s)	892
Fnu4HI	GCNGC	5 cut(s)	178, 202, 288, 291, 404
FokI	GGATG	4 cut(s)	24, 432, 1223, 1242
FriOI	GRGCYC	1 cut(s)	147
Fsp4HI	GCNGC	5 cut(s)	178, 202, 288, 291, 404
GlaI	GCGC	1 cut(s)	1238
GluI	GCNGC	5 cut(s)	178, 202, 288, 291, 404
GsaI	CCCAGC	1 cut(s)	671
GsuI	CTGGAG	2 cut(s)	234, 1149
HaeIII	GGCC	3 cut(s)	27, 151, 302
HapII	CCGG	3 cut(s)	294, 426, 449
HgaI	GACGC	1 cut(s)	193
HhaI	GCGC	1 cut(s)	1239
Hin1II	CATG	6 cut(s)	346, 545, 604, 707, 792, 1066
Hin6I	GCGC	1 cut(s)	1237
HinP1I	GCGC	1 cut(s)	1237
HincII	GTYRAC	2 cut(s)	59, 1170
HindII	GTYRAC	2 cut(s)	59, 1170
HinfI	GANTC	5 cut(s)	55, 347, 814, 913, 998
HpaI	GTTAAC	1 cut(s)	1170
HpaII	CCGG	3 cut(s)	294, 426, 449
HphI	GGTGA	5 cut(s)	440, 463, 638, 823, 922
Hpy166II	GTNNAC	5 cut(s)	59, 440, 586, 1170, 1244
Hpy188I	TCNGA	4 cut(s)	83, 161, 194, 991
Hpy188III	TCNNGA	3 cut(s)	872, 947, 1031
Hpy8I	GTNNAC	5 cut(s)	59, 440, 586, 1170, 1244
Hpy99I	CGWCG	3 cut(s)	188, 362, 365
HpyAV	CCTTC	5 cut(s)	25, 653, 1129, 1173, 1272
HpyCH4III	ACNGT	2 cut(s)	94, 118
HpyCH4IV	ACGT	1 cut(s)	186
HpyCH4V	TGCA	5 cut(s)	403, 586, 808, 995, 1146
HpyF10VI	GCNNNNNNNGC	3 cut(s)	207, 299, 538
HpyF3I	CTNAG	5 cut(s)	80, 272, 467, 915, 1274
HpySE526I	ACGT	1 cut(s)	186
Hsp92II	CATG	6 cut(s)	346, 545, 604, 707, 792, 1066
HspAI	GCGC	1 cut(s)	1237
KflI	GGGWCCC	1 cut(s)	936
KroI	GCCGGC	1 cut(s)	293
KroNI	GCCGGC	1 cut(s)	295
Ksp22I	TGATCA	1 cut(s)	892
KspAI	GTTAAC	1 cut(s)	1170
Kzo9I	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
LmnI	GCTCC	2 cut(s)	142, 259
Lsp1109I	GCAGC	2 cut(s)	213, 415
LweI	GCATC	4 cut(s)	189, 390, 982, 1238
MaeII	ACGT	1 cut(s)	186
MaeIII	GTNAC	5 cut(s)	348, 451, 608, 910, 957
MalI	GATC	8 cut(s)	155, 366, 573, 753, 879, 894, 1029, 1099
MbiI	CCGCTC	1 cut(s)	466
MboI	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
MboII	GAAGA	3 cut(s)	125, 313, 369
MfeI	CAATTG	1 cut(s)	1002
MflI	RGATCY	1 cut(s)	1097
MhlI	GDGCHC	2 cut(s)	147, 588
MluCI	AATT	9 cut(s)	164, 421, 457, 481, 590, 783, 1002, 1141, 1201
MlyI	GAGTC	3 cut(s)	64, 356, 907
MreI	CGCCGGCG	1 cut(s)	293
MroNI	GCCGGC	1 cut(s)	293
MroXI	GAANNNNTTC	1 cut(s)	784
MseI	TTAA	4 cut(s)	420, 549, 1085, 1169
MslI	CAYNNNNRTG	2 cut(s)	708, 729
MspCI	CTTAAG	1 cut(s)	548
MspI	CCGG	3 cut(s)	294, 426, 449
MunI	CAATTG	1 cut(s)	1002
MwoI	GCNNNNNNNGC	3 cut(s)	207, 299, 538
NaeI	GCCGGC	1 cut(s)	295
NdeII	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
NgoMIV	GCCGGC	1 cut(s)	293
NlaIII	CATG	6 cut(s)	346, 545, 604, 707, 792, 1066
NlaIV	GGNNCC	2 cut(s)	937, 938
NmuCI	GTSAC	4 cut(s)	348, 451, 608, 910
PaqCI	CACCTGC	1 cut(s)	799
PdiI	GCCGGC	1 cut(s)	295
PdmI	GAANNNNTTC	1 cut(s)	784
PfeI	GAWTC	2 cut(s)	814, 998
PkrI	GCNGC	5 cut(s)	179, 203, 289, 292, 405
Ple19I	CGATCG	1 cut(s)	367
PleI	GAGTC	3 cut(s)	63, 355, 907
PpsI	GAGTC	3 cut(s)	63, 355, 907
PpuMI	RGGWCCY	2 cut(s)	415, 936
PsiI	TTATAA	1 cut(s)	1020
Psp124BI	GAGCTC	1 cut(s)	147
Psp5II	RGGWCCY	2 cut(s)	415, 936
PspEI	GGTNACC	1 cut(s)	451
PspFI	CCCAGC	1 cut(s)	667
PspN4I	GGNNCC	2 cut(s)	937, 938
PspPI	GGNCC	5 cut(s)	25, 126, 415, 936, 1252
PspPPI	RGGWCCY	2 cut(s)	415, 936
PstI	CTGCAG	1 cut(s)	810
PstNI	CAGNNNCTG	1 cut(s)	207
PsuI	RGATCY	1 cut(s)	1097
PvuI	CGATCG	1 cut(s)	367
RsaI	GTAC	3 cut(s)	78, 473, 1187
RsaNI	GTAC	3 cut(s)	77, 472, 1186
RseI	CAYNNNNRTG	2 cut(s)	708, 729
SacI	GAGCTC	1 cut(s)	147
SaqAI	TTAA	4 cut(s)	420, 549, 1085, 1169
SatI	GCNGC	5 cut(s)	178, 202, 288, 291, 404
Sau3AI	GATC	8 cut(s)	153, 364, 571, 751, 877, 892, 1027, 1097
Sau96I	GGNCC	5 cut(s)	25, 126, 415, 936, 1252
SchI	GAGTC	3 cut(s)	64, 356, 907
SduI	GDGCHC	2 cut(s)	147, 588
SfaNI	GCATC	4 cut(s)	189, 390, 982, 1238
SfcI	CTRYAG	1 cut(s)	806
SgrAI	CRCCGGYG	1 cut(s)	293
SinI	GGWCC	4 cut(s)	126, 415, 936, 1252
SmiMI	CAYNNNNRTG	2 cut(s)	708, 729
SmlI	CTYRAG	3 cut(s)	407, 548, 575
SmoI	CTYRAG	3 cut(s)	407, 548, 575
Sse9I	AATT	9 cut(s)	164, 421, 457, 481, 590, 783, 1002, 1141, 1201
SsiI	CCGC	9 cut(s)	178, 285, 288, 291, 464, 830, 846, 850, 1113
SstI	GAGCTC	1 cut(s)	147
StyI	CCWWGG	2 cut(s)	138, 392
TaaI	ACNGT	2 cut(s)	94, 118
TaiI	ACGT	1 cut(s)	189
TaqI	TCGA	3 cut(s)	183, 491, 1050
TaqII	GACCGA	1 cut(s)	371
TasI	AATT	9 cut(s)	164, 421, 457, 481, 590, 783, 1002, 1141, 1201
TauI	GCSGC	3 cut(s)	180, 290, 293
TfiI	GAWTC	2 cut(s)	814, 998
Tru1I	TTAA	4 cut(s)	420, 549, 1085, 1169
Tru9I	TTAA	4 cut(s)	420, 549, 1085, 1169
TscAI	CASTG	2 cut(s)	97, 357
TseFI	GTSAC	4 cut(s)	348, 451, 608, 910
TseI	GCWGC	2 cut(s)	201, 403
Tsp45I	GTSAC	4 cut(s)	348, 451, 608, 910
TspDTI	ATGAA	2 cut(s)	726, 777
TspRI	CASTG	2 cut(s)	97, 357
Vha464I	CTTAAG	1 cut(s)	548
VneI	GTGCAC	1 cut(s)	584
VpaK11BI	GGWCC	4 cut(s)	126, 415, 936, 1252
XapI	RAATTY	1 cut(s)	164
XcmI	CCANNNNNNNNNTGG	2 cut(s)	620, 1266
XmnI	GAANNNNTTC	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.