FvH4_4g22740

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000320
Physical Location & Seq
Reverse (-)
25453431 .. 25457792
4362 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22740.t1

Sequence Viewer

Length: 1782 bp
ATGATATCCCAAAAAGGCCAAAATACCATACCTCCATTGACAAAGATTTTAGGCCTTCTCTTTCTTACTATTCTGTTCTTGTTGGTGGTTCATGGCGAGGTGCATCACTATGAATTTGTTGTTAGGGAGAAAAACTTCACTAGGCTATGTGAAACAAAGAGCATGCTAGTCGTGAATGACAGCTTTCCAGGTCCGGAGATACGAGTTCACAGAGGAGACACAGTTTATGTTAATGTTCATAACCAAGGATATTATGGTTTCACTATTCACTGGCATGGAGTGAGACAGCCCAGAAATCCATGGTCAGATGGTCCAGAATATATAACACAATGTCCAATTTCGCCCGGGACTAATTTTACTTATGAAGTCATATTGTCTGAAGAAGAGGGAACTCTATGGTGGCATGCTCATAGTGATTGGACAAGAGCGTCAGTTCATGGTGCCATTGTTATCTTACCTGCTGTTGGAACCACATTTCCATTTCCTCTACCAGATGAAGATGAGACCATTGTGTTGGCCTCTTGGTACAAGGGAGATTTGAAAGCAGTGGTTGATACGGCTATGGAAACTGGTAGCGATTTACCCTCTTCTGATGCTTACACTATAAATGGCCAACCAGGGGATCTTTGTCCATGCTCCAGTGAAACAACTTATCGCCGTAAGATAGATTACGGCAAGACCTACCTTCTTCGGATAGTGAATGCAAACTTGAATGCAGAAGTCTTCTTTGCAATTGCTCAACACAATCTTACAGTGGTAGGCCTTGATGGAGCTTATATAAAACCCATAAGCACATCTTACATAATCACACTTCCAGGACAAACAATGGATGTCCTATTCGAAGCAAAACAGCCTCTTGGCCAATATTACATGGCTGCTCGGATATATTGGACTGAGGATGCTGAAGTTGATAATTTTGACCATGAAAATGCTACTGCCATCTTTGAATACAACGGCAACTATACCTCCCCAACATCTCCTTCTTTTCCAAGTACCCTTCCCTCATATTTGGATTATTTTGGAGCATTGAAGTTTACTGACCAAATTAAAAGCCTAGCGACTCCTGCATACCCTGTCAATGTACCAGTGAACATTTCTACCAAAATGTATATAGTAGTGTCGATGAATTCCCTATCCTGCGAACATTCTGGATGCGATTCTGATCAACAAATCGCTACAAGCCTAAACAATATCAGTTGGGCAAACCCCGGAATAGATGTTTTGCAGGCATACTACAGAAACCTAAGTGGAGTTTATACAACAGATTTTCCAGAGCAGCCGCTTTCGTACTATAACTTCACAGATGTAAGTTTTGATCCAGAAATTGTGTTCACAGACCAAGCGAGAAGAGTAAAGGTGTTGAATTACAACGAATCGGTTGAGATTGTTTTTCAAGGCACCAATGTGCTAGATCATTCCATGAGTCATCCCATGCATTTGCATGGCTATAGCTTCTACGTGGTCGGATATGGTTTTGGGAATTATGACAATGTGACTGACCCGAAACGATTTAACTTGGTTGATCCTCCTCAAGTAACTACTTTCGCGATTCCAAGGAAGGGATGGTTGGCCATCAGATTTACTGCAAATAATCCTGGTGTTTGGTTTTGGCATTGTCATTTCGAAAAACACTTAAGTTGGGGAATGAATGCTGCGTTTATAGTGAAGAATGGGGGAACTCCGGAGACTAGCATCCGCGATCCCCCAACCTACATGCCTCCATGCAGAGTTTTGTTAAATTCTCACGTCCAAGATTTTGATGCAAATACGGTGAAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

594

Amino Acids

66.88

Weight (kDa)

5.33

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 41 - 153 1.2e-39 Multicopper oxidase
Cu-oxidase PF00394 167 - 320 4.4e-35 Multicopper oxidase
Cu-oxidase_2 PF07731 443 - 557 7.9e-39 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 427
Acc36I ACCTGC 1 cut(s) 466
AccB1I GGYRCC 2 cut(s) 440, 1397
AccII CGCG 2 cut(s) 1547, 1698
AccIII TCCGGA 2 cut(s) 193, 1681
AciI CCGC 2 cut(s) 1280, 1696
AclWI GGATC 4 cut(s) 630, 1310, 1517, 1694
AcoI YGGCCR 3 cut(s) 610, 859, 1569
AcsI RAATTY 3 cut(s) 113, 1126, 1738
AcuI CTGAAG 2 cut(s) 399, 924
AfaI GTAC 4 cut(s) 527, 994, 1083, 1289
AfiI CCNNNNNNNGG 3 cut(s) 464, 619, 1559
AflII CTTAAG 1 cut(s) 1633
AgsI TTSAA 6 cut(s) 541, 712, 947, 1030, 1363, 1394
AjiI CACGTC 1 cut(s) 1747
AjnI CCWGG 4 cut(s) 187, 616, 814, 1594
AjuI GAANNNNNNNTTGG 4 cut(s) 964, 996, 1550, 1582
AleI CACNNNNGTG 1 cut(s) 1403
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
AluBI AGCT 3 cut(s) 183, 773, 1452
AluI AGCT 3 cut(s) 183, 773, 1452
Alw26I GTCTC 4 cut(s) 210, 277, 497, 1679
AlwI GGATC 4 cut(s) 630, 1310, 1517, 1694
Ama87I CYCGRG 1 cut(s) 344
Aor13HI TCCGGA 2 cut(s) 193, 1681
AoxI GGCC 7 cut(s) 16, 52, 516, 610, 760, 859, 1569
ApeKI GCWGC 3 cut(s) 875, 1276, 1652
ApoI RAATTY 3 cut(s) 113, 1126, 1738
Asp700I GAANNNNTTC 1 cut(s) 134
AspS9I GGNCC 2 cut(s) 191, 311
AsuC2I CCSGG 3 cut(s) 345, 346, 1209
AsuII TTCGAA 2 cut(s) 840, 1623
AvaI CYCGRG 1 cut(s) 344
AvaII GGWCC 2 cut(s) 191, 311
BalI TGGCCA 3 cut(s) 612, 861, 1571
BanI GGYRCC 2 cut(s) 440, 1397
BarI GAAGNNNNNNTAC 2 cut(s) 1280, 1312
BbsI GAAGAC 1 cut(s) 715
BbvI GCAGC 3 cut(s) 862, 1288, 1639
BccI CCATC 5 cut(s) 302, 761, 947, 1557, 1580
BceAI ACGGC 4 cut(s) 573, 642, 688, 970
BcgI CGANNNNNNTGC 2 cut(s) 151, 185
BciT130I CCWGG 4 cut(s) 189, 618, 816, 1596
BclI TGATCA 1 cut(s) 1162
BcnI CCSGG 3 cut(s) 345, 346, 1209
BcoDI GTCTC 4 cut(s) 210, 277, 497, 1679
BfaI CTAG 5 cut(s) 141, 167, 1055, 1409, 1689
BfmI CTRYAG 2 cut(s) 1234, 1447
BfrI CTTAAG 1 cut(s) 1633
BfuAI ACCTGC 1 cut(s) 466
BisI GCNGC 4 cut(s) 876, 1277, 1280, 1653
BlsI GCNGC 4 cut(s) 877, 1278, 1281, 1654
Bme1390I CCNGG 7 cut(s) 189, 345, 346, 618, 816, 1209, 1596
Bme18I GGWCC 2 cut(s) 191, 311
BmeT110I CYCGRG 1 cut(s) 344
BmgBI CACGTC 1 cut(s) 1747
BmgT120I GGNCC 2 cut(s) 191, 311
BmiI GGNNCC 3 cut(s) 442, 469, 1399
BmrFI CCNGG 7 cut(s) 189, 345, 346, 618, 816, 1209, 1596
BmsI GCATC 6 cut(s) 112, 583, 889, 1142, 1701, 1750
BpiI GAAGAC 1 cut(s) 715
BpmI CTGGAG 1 cut(s) 622
Bpu14I TTCGAA 2 cut(s) 840, 1623
BpuEI CTTGAG 1 cut(s) 1515
BpuMI CCSGG 3 cut(s) 345, 346, 1209
BsaAI YACGTR 1 cut(s) 1459
BsaBI GATNNNNATC 1 cut(s) 1161
BsaI GGTCTC 1 cut(s) 497
BsaJI CCNNGG 6 cut(s) 244, 299, 344, 617, 1207, 1553
BsaWI WCCGGW 2 cut(s) 193, 1681
BsaXI ACNNNNNCTCC 6 cut(s) 16, 46, 207, 237, 950, 980
Bsc4I CCNNNNNNNGG 3 cut(s) 464, 619, 1559
Bse1I ACTGG 4 cut(s) 275, 574, 639, 1085
Bse8I GATNNNNATC 1 cut(s) 1161
BseAI TCCGGA 2 cut(s) 193, 1681
BseBI CCWGG 4 cut(s) 189, 618, 816, 1596
BseDI CCNNGG 6 cut(s) 244, 299, 344, 617, 1207, 1553
BseGI GGATG 6 cut(s) 835, 904, 1157, 1426, 1568, 1692
BseJI GATNNNNATC 1 cut(s) 1161
BseLI CCNNNNNNNGG 3 cut(s) 464, 619, 1559
BseMII CTCAG 1 cut(s) 885
BseNI ACTGG 4 cut(s) 275, 574, 639, 1085
BseRI GAGGAG 2 cut(s) 228, 1518
BseXI GCAGC 3 cut(s) 862, 1288, 1639
Bsh1236I CGCG 2 cut(s) 1547, 1698
BshFI GGCC 7 cut(s) 18, 54, 518, 612, 762, 861, 1571
BshNI GGYRCC 2 cut(s) 440, 1397
BsiHKCI CYCGRG 1 cut(s) 344
BsiSI CCGG 4 cut(s) 194, 345, 1209, 1682
BslFI GGGAC 1 cut(s) 361
BslI CCNNNNNNNGG 3 cut(s) 464, 619, 1559
BsmAI GTCTC 4 cut(s) 210, 277, 497, 1679
BsmFI GGGAC 1 cut(s) 361
BsmI GAATGC 3 cut(s) 706, 718, 1654
BsnI GGCC 7 cut(s) 18, 54, 518, 612, 762, 861, 1571
Bso31I GGTCTC 1 cut(s) 497
BsoBI CYCGRG 1 cut(s) 344
Bsp119I TTCGAA 2 cut(s) 840, 1623
Bsp13I TCCGGA 2 cut(s) 193, 1681
Bsp143I GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
Bsp19I CCATGG 1 cut(s) 299
Bsp68I TCGCGA 1 cut(s) 1547
BspACI CCGC 2 cut(s) 1280, 1696
BspANI GGCC 7 cut(s) 18, 54, 518, 612, 762, 861, 1571
BspCNI CTCAG 1 cut(s) 886
BspEI TCCGGA 2 cut(s) 193, 1681
BspFNI CGCG 2 cut(s) 1547, 1698
BspLI GGNNCC 3 cut(s) 442, 469, 1399
BspMI ACCTGC 1 cut(s) 466
BspPI GGATC 4 cut(s) 630, 1310, 1517, 1694
BspT104I TTCGAA 2 cut(s) 840, 1623
BspT107I GGYRCC 2 cut(s) 440, 1397
BspTI CTTAAG 1 cut(s) 1633
BspTNI GGTCTC 1 cut(s) 497
BsrI ACTGG 4 cut(s) 275, 574, 639, 1085
BssECI CCNNGG 6 cut(s) 244, 299, 344, 617, 1207, 1553
BssMI GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
BssT1I CCWWGG 3 cut(s) 244, 299, 1553
Bst2UI CCWGG 4 cut(s) 189, 618, 816, 1596
Bst4CI ACNGT 3 cut(s) 223, 754, 1771
Bst6I CTCTTC 3 cut(s) 378, 592, 1342
BstAFI CTTAAG 1 cut(s) 1633
BstBAI YACGTR 1 cut(s) 1459
BstBI TTCGAA 2 cut(s) 840, 1623
BstC8I GCNNGC 3 cut(s) 164, 405, 1227
BstDEI CTNAG 2 cut(s) 894, 1244
BstDSI CCRYGG 1 cut(s) 299
BstF5I GGATG 6 cut(s) 835, 904, 1157, 1426, 1568, 1692
BstFNI CGCG 2 cut(s) 1547, 1698
BstKTI GATC 6 cut(s) 625, 1165, 1318, 1414, 1525, 1702
BstMAI GTCTC 4 cut(s) 210, 277, 497, 1679
BstMBI GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
BstMWI GCNNNNNNNGC 1 cut(s) 1064
BstNI CCWGG 4 cut(s) 189, 618, 816, 1596
BstNSI RCATGY 3 cut(s) 166, 407, 1717
BstSCI CCNGG 7 cut(s) 187, 343, 344, 616, 814, 1207, 1594
BstSFI CTRYAG 2 cut(s) 1234, 1447
BstUI CGCG 2 cut(s) 1547, 1698
BstV1I GCAGC 3 cut(s) 862, 1288, 1639
BstV2I GAAGAC 1 cut(s) 715
BstX2I RGATCY 1 cut(s) 622
BstXI CCANNNNNNTGG 1 cut(s) 514
BstYI RGATCY 1 cut(s) 622
BsuRI GGCC 7 cut(s) 18, 54, 518, 612, 762, 861, 1571
BtgI CCRYGG 1 cut(s) 299
BtrI CACGTC 1 cut(s) 1747
BtsCI GGATG 6 cut(s) 835, 904, 1157, 1426, 1568, 1692
BtsI GCAGTG 1 cut(s) 552
BtsIMutI CAGTG 5 cut(s) 268, 552, 646, 759, 1092
BtuMI TCGCGA 1 cut(s) 1547
BveI ACCTGC 1 cut(s) 466
Cac8I GCNNGC 3 cut(s) 164, 405, 1227
Cfr13I GGNCC 2 cut(s) 191, 311
Cfr9I CCCGGG 1 cut(s) 344
CseI GACGC 1 cut(s) 417
Csp6I GTAC 4 cut(s) 526, 993, 1082, 1288
CviQI GTAC 4 cut(s) 526, 993, 1082, 1288
DdeI CTNAG 2 cut(s) 894, 1244
DpnI GATC 6 cut(s) 624, 1164, 1317, 1413, 1524, 1701
DpnII GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
DrdI GACNNNNNNGTC 1 cut(s) 427
DseDI GACNNNNNNGTC 1 cut(s) 427
EaeI YGGCCR 3 cut(s) 610, 859, 1569
Eam1104I CTCTTC 3 cut(s) 378, 592, 1342
EarI CTCTTC 3 cut(s) 378, 592, 1342
Eco130I CCWWGG 3 cut(s) 244, 299, 1553
Eco147I AGGCCT 2 cut(s) 54, 762
Eco31I GGTCTC 1 cut(s) 497
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 2 cut(s) 191, 311
Eco57I CTGAAG 2 cut(s) 399, 924
Eco88I CYCGRG 1 cut(s) 344
EcoRI GAATTC 1 cut(s) 1126
EcoRII CCWGG 4 cut(s) 187, 616, 814, 1594
EcoRV GATATC 1 cut(s) 6
EcoT14I CCWWGG 3 cut(s) 244, 299, 1553
EcoT22I ATGCAT 1 cut(s) 1437
ErhI CCWWGG 3 cut(s) 244, 299, 1553
FalI AAGNNNNNCTT 2 cut(s) 781, 813
FaqI GGGAC 1 cut(s) 361
FbaI TGATCA 1 cut(s) 1162
Fnu4HI GCNGC 4 cut(s) 876, 1277, 1280, 1653
FokI GGATG 6 cut(s) 842, 911, 1164, 1413, 1575, 1679
Fsp4HI GCNGC 4 cut(s) 876, 1277, 1280, 1653
FspBI CTAG 5 cut(s) 141, 167, 1055, 1409, 1689
GluI GCNGC 4 cut(s) 876, 1277, 1280, 1653
GsuI CTGGAG 1 cut(s) 622
HaeIII GGCC 7 cut(s) 18, 54, 518, 612, 762, 861, 1571
HapII CCGG 4 cut(s) 194, 345, 1209, 1682
HgaI GACGC 1 cut(s) 417
HinfI GANTC 5 cut(s) 1060, 1157, 1373, 1423, 1549
HpaII CCGG 4 cut(s) 194, 345, 1209, 1682
Hpy166II GTNNAC 4 cut(s) 208, 1035, 1090, 1332
Hpy188I TCNGA 8 cut(s) 307, 379, 592, 693, 882, 1162, 1466, 1577
Hpy188III TCNNGA 8 cut(s) 172, 194, 314, 1149, 1271, 1319, 1546, 1682
Hpy8I GTNNAC 4 cut(s) 208, 1035, 1090, 1332
HpyAV CCTTC 5 cut(s) 65, 695, 990, 1007, 1552
HpyCH4III ACNGT 3 cut(s) 223, 754, 1771
HpyCH4IV ACGT 2 cut(s) 1458, 1746
HpyF10VI GCNNNNNNNGC 1 cut(s) 1064
HpyF3I CTNAG 2 cut(s) 894, 1244
HpySE526I ACGT 2 cut(s) 1458, 1746
Kpn2I TCCGGA 2 cut(s) 193, 1681
Ksp22I TGATCA 1 cut(s) 1162
Kzo9I GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
LmnI GCTCC 3 cut(s) 641, 770, 1022
Lsp1109I GCAGC 3 cut(s) 862, 1288, 1639
LweI GCATC 6 cut(s) 112, 583, 889, 1142, 1701, 1750
MaeI CTAG 5 cut(s) 141, 167, 1055, 1409, 1689
MaeII ACGT 2 cut(s) 1458, 1746
MaeIII GTNAC 2 cut(s) 1492, 1534
MalI GATC 6 cut(s) 624, 1164, 1317, 1413, 1524, 1701
MboI GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
MboII GAAGA 8 cut(s) 392, 395, 509, 579, 680, 715, 1359, 1678
MfeI CAATTG 1 cut(s) 732
MflI RGATCY 1 cut(s) 622
MlsI TGGCCA 3 cut(s) 612, 861, 1571
MluNI TGGCCA 3 cut(s) 612, 861, 1571
MlyI GAGTC 2 cut(s) 1054, 1432
MmeI TCCRAC 2 cut(s) 445, 1444
Mox20I TGGCCA 3 cut(s) 612, 861, 1571
Mph1103I ATGCAT 1 cut(s) 1437
MroI TCCGGA 2 cut(s) 193, 1681
MroXI GAANNNNTTC 1 cut(s) 134
MscI TGGCCA 3 cut(s) 612, 861, 1571
MseI TTAA 5 cut(s) 231, 1047, 1512, 1634, 1736
MslI CAYNNNNRTG 5 cut(s) 108, 273, 927, 1403, 1440
Msp20I TGGCCA 3 cut(s) 612, 861, 1571
MspCI CTTAAG 1 cut(s) 1633
MspI CCGG 4 cut(s) 194, 345, 1209, 1682
MspR9I CCNGG 7 cut(s) 189, 345, 346, 618, 816, 1209, 1596
MunI CAATTG 1 cut(s) 732
Mva1269I GAATGC 3 cut(s) 706, 718, 1654
MvaI CCWGG 4 cut(s) 189, 618, 816, 1596
MvnI CGCG 2 cut(s) 1547, 1698
MwoI GCNNNNNNNGC 1 cut(s) 1064
NciI CCSGG 3 cut(s) 345, 346, 1209
NcoI CCATGG 1 cut(s) 299
NdeII GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
NlaIV GGNNCC 3 cut(s) 442, 469, 1399
NmuCI GTSAC 1 cut(s) 1492
NruI TCGCGA 1 cut(s) 1547
NsiI ATGCAT 1 cut(s) 1437
NspI RCATGY 3 cut(s) 166, 407, 1717
NspV TTCGAA 2 cut(s) 840, 1623
OliI CACNNNNGTG 1 cut(s) 1403
PaeI GCATGC 2 cut(s) 166, 407
PceI AGGCCT 2 cut(s) 54, 762
PctI GAATGC 3 cut(s) 706, 718, 1654
PdmI GAANNNNTTC 1 cut(s) 134
PfeI GAWTC 3 cut(s) 1157, 1373, 1549
PfoI TCCNGGA 1 cut(s) 814
PkrI GCNGC 4 cut(s) 877, 1278, 1281, 1654
PleI GAGTC 2 cut(s) 1054, 1431
PpsI GAGTC 2 cut(s) 1054, 1431
Ppu21I YACGTR 1 cut(s) 1459
Psp6I CCWGG 4 cut(s) 187, 616, 814, 1594
PspGI CCWGG 4 cut(s) 187, 616, 814, 1594
PspN4I GGNNCC 3 cut(s) 442, 469, 1399
PspPI GGNCC 2 cut(s) 191, 311
PsuI RGATCY 1 cut(s) 622
RruI TCGCGA 1 cut(s) 1547
RsaI GTAC 4 cut(s) 527, 994, 1083, 1289
RsaNI GTAC 4 cut(s) 526, 993, 1082, 1288
RseI CAYNNNNRTG 5 cut(s) 108, 273, 927, 1403, 1440
SaqAI TTAA 5 cut(s) 231, 1047, 1512, 1634, 1736
SatI GCNGC 4 cut(s) 876, 1277, 1280, 1653
Sau3AI GATC 6 cut(s) 622, 1162, 1315, 1411, 1522, 1699
Sau96I GGNCC 2 cut(s) 191, 311
SchI GAGTC 2 cut(s) 1054, 1432
ScrFI CCNGG 7 cut(s) 189, 345, 346, 618, 816, 1209, 1596
SfaNI GCATC 6 cut(s) 112, 583, 889, 1142, 1701, 1750
SfcI CTRYAG 2 cut(s) 1234, 1447
SfuI TTCGAA 2 cut(s) 840, 1623
SinI GGWCC 2 cut(s) 191, 311
SmaI CCCGGG 1 cut(s) 346
SmiMI CAYNNNNRTG 5 cut(s) 108, 273, 927, 1403, 1440
SmlI CTYRAG 2 cut(s) 1530, 1633
SmoI CTYRAG 2 cut(s) 1530, 1633
SphI GCATGC 2 cut(s) 166, 407
SseBI AGGCCT 2 cut(s) 54, 762
SsiI CCGC 2 cut(s) 1280, 1696
SspI AATATT 1 cut(s) 866
SspMI CTAG 5 cut(s) 141, 167, 1055, 1409, 1689
StuI AGGCCT 2 cut(s) 54, 762
StyD4I CCNGG 7 cut(s) 187, 343, 344, 616, 814, 1207, 1594
StyI CCWWGG 3 cut(s) 244, 299, 1553
TaaI ACNGT 3 cut(s) 223, 754, 1771
TaiI ACGT 2 cut(s) 1461, 1749
TaqI TCGA 3 cut(s) 840, 1121, 1623
TauI GCSGC 1 cut(s) 1282
TfiI GAWTC 3 cut(s) 1157, 1373, 1549
Tru1I TTAA 5 cut(s) 231, 1047, 1512, 1634, 1736
Tru9I TTAA 5 cut(s) 231, 1047, 1512, 1634, 1736
TscAI CASTG 5 cut(s) 275, 552, 646, 759, 1092
TseFI GTSAC 1 cut(s) 1492
TseI GCWGC 3 cut(s) 875, 1276, 1652
Tsp45I GTSAC 1 cut(s) 1492
TspDTI ATGAA 9 cut(s) 80, 126, 227, 378, 425, 510, 939, 1139, 1661
TspMI CCCGGG 1 cut(s) 344
TspRI CASTG 5 cut(s) 275, 552, 646, 759, 1092
Vha464I CTTAAG 1 cut(s) 1633
VpaK11BI GGWCC 2 cut(s) 191, 311
XapI RAATTY 3 cut(s) 113, 1126, 1738
XceI RCATGY 3 cut(s) 166, 407, 1717
XcmI CCANNNNNNNNNTGG 2 cut(s) 251, 1560
XmaI CCCGGG 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 5 cut(s) 141, 167, 1055, 1409, 1689
Zsp2I ATGCAT 1 cut(s) 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.