RLG00000000906

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000320
Physical Location & Seq
Forward (+)
7827626 .. 7830337
2712 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000906

Sequence Viewer

Length: 1593 bp
ATGCATTGCGATGCACTTTGTGAAATGGAGGTGTACAAAGCAACGTCTCCGGTGCTTGCACCGACACTTCTGTCCGGTTCCGTGGTGCTCTCTGATGGTTCCATTGATGTTTGCTTCGCGATAGTGATTTTCGATGTCGTTCTCTTCTTGGTTGTCTGTAATTTGGTTTCGATTTTGCTTGGTTTGTGTGATTTTGTGGCTTTCTGGAGTCGGCATGGAATAAGGCAGCTAAGAAATCCATGGTCAGATGGTCCTGAGTACATCACACAGTGTCCTATTCAGCCGAGGACAAATTTCACCTACGAAGTCCTATTATCCAAGGAAGAAGGAACTGTATGGTGGCATGCTCACAGTGATTGGGCGCGGGCCAGTGTTCATGGTGCCATTGTCATCTTGCCTGCTGTTGGAACCACATTTCCATTTCCTAAACCTGATGAAGATGAGGTCATCATAATTGCATCCTGGTATAAGGGAGATCTGCAAGCGCGGGTTGATGAGGCTATGGTAGATAACGAGAACTTACCTCATTCTGATGCTTACACCATAAATGGCCAGCCTGGAGATCTTTGTCCTTGCTCAAATGAAGCAACTTACCGTCGGAATGTGGACTACGGCAAGACCTATCTTCTTCGTATAGTCAATGCAAACATTGATGCAGATATTTTCTTTGCAATTGCACAACACAACTTTACTGTGGTTGGACTCGATGGAGCCTATATTAAACCCATTGACACAACCTACATAGTGTTGAGCCCTGGACAAACAATGGATGTTTTGCTTGAAGCAAATCAGGTTATCGGGCACTATTACATGGCCGGGAGACATTTCTCGAGTGAGAATTTGGCGGTTGTTGACTTTGACCATGCGAATGTTACTGCAATTTTAGAATACAATGGCAACTATACCCATCCGACATCTCCTGTCTTTCCCAGTAATCTTCCGATGTACCACGACTTTGTAGCATCACTGAACTTCACAAACCAAATTAGAAGCTTAGCCATCCCGGAATATGCTGTAAATGTCCCATTAGACAATGAAATTACTACTAGGATGTTTATAACAACTTCCATGAATTCTCTCTATTGTGAAGATTCAAGCTCAGGTTGTGAAAAGAAACAAATTAGTGCAAGCGTAAATAATATCAGTTGGGTTAACCCAAGTACTGATATCTTGCAAGCCTATTACAGAAACATAAGCGGAGTCTACTCAGCAGATTTCCCAGATTATCCACCTTCTTTCTATAACTTCACTGATGAATCGTACTCGATTGATACGGTGTTAACAGTACAAGGGAGAAAGGTTAAGGTGTTAAATTACAATGAATCGGTTGAGATTGTATTTCAGGGAACTAATGTGTTAGACGGCTCTGTGAATCATCCGATGCATTTGCATGGATATAGCTTTTATGTGGTTGGGTATGGCTTTGGAAATTATGACAATGTTACTGACCCCAAAGGGTTTAATTTAGTTGATCCTCCTGAGGTAAATACATTTGCAGTTCCCAAGAATGGATGGTTAGCAATCAGATTCACAGCAAACAATCCAGGTTTGTTTTCCTCCCGTTTATCCCATGAAGAATATTCTTTGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

531

Amino Acids

59.16

Weight (kDa)

4.74

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 72 - 133 6.6e-19 Multicopper oxidase
Cu-oxidase PF00394 147 - 300 3.2e-34 Multicopper oxidase
Cu-oxidase_2 PF07731 409 - 518 2.9e-26 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1058
AasI GACNNNNNNGTC 1 cut(s) 70
AccB1I GGYRCC 1 cut(s) 380
AccI GTMKAC 1 cut(s) 1203
AccII CGCG 3 cut(s) 119, 364, 487
AciI CCGC 4 cut(s) 364, 487, 845, 1197
AclWI GGATC 1 cut(s) 1466
AcoI YGGCCR 2 cut(s) 550, 813
AcsI RAATTY 3 cut(s) 292, 838, 1072
AdeI CACNNNGTG 2 cut(s) 20, 270
AfaI GTAC 6 cut(s) 35, 260, 947, 1162, 1262, 1287
AfiI CCNNNNNNNGG 2 cut(s) 404, 1508
AgsI TTSAA 3 cut(s) 782, 1095, 1588
AjnI CCWGG 4 cut(s) 461, 556, 754, 1543
AloI GAACNNNNNNTCC 2 cut(s) 400, 432
AluBI AGCT 4 cut(s) 229, 993, 1098, 1401
AluI AGCT 4 cut(s) 229, 993, 1098, 1401
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 2 cut(s) 51, 814
AlwI GGATC 1 cut(s) 1466
Ama87I CYCGRG 1 cut(s) 829
AoxI GGCC 3 cut(s) 366, 550, 813
ApeKI GCWGC 1 cut(s) 226
ApoI RAATTY 3 cut(s) 292, 838, 1072
AspLEI GCGC 2 cut(s) 364, 487
AspS9I GGNCC 2 cut(s) 251, 366
AsuC2I CCSGG 2 cut(s) 817, 1004
AsuHPI GGTGA 1 cut(s) 289
AvaI CYCGRG 1 cut(s) 829
AvaII GGWCC 1 cut(s) 251
AxyI CCTNAGG 1 cut(s) 1479
BaeGI GKGCMC 1 cut(s) 804
BalI TGGCCA 1 cut(s) 552
BanI GGYRCC 1 cut(s) 380
BanII GRGCYC 1 cut(s) 755
Bbv12I GWGCWC 1 cut(s) 90
BbvI GCAGC 1 cut(s) 238
BccI CCATC 6 cut(s) 89, 242, 701, 915, 1007, 1506
BceAI ACGGC 2 cut(s) 628, 1378
BcgI CGANNNNNNTGC 2 cut(s) 1369, 1403
BciT130I CCWGG 4 cut(s) 463, 558, 756, 1545
BcnI CCSGG 2 cut(s) 817, 1004
BcoDI GTCTC 2 cut(s) 51, 814
BfaI CTAG 1 cut(s) 1047
BglII AGATCT 2 cut(s) 475, 562
BisI GCNGC 1 cut(s) 227
BlpI GCTNAGC 1 cut(s) 994
BlsI GCNGC 1 cut(s) 228
BmcAI AGTACT 1 cut(s) 1162
Bme1390I CCNGG 6 cut(s) 463, 558, 756, 817, 1004, 1545
Bme18I GGWCC 1 cut(s) 251
BmeT110I CYCGRG 1 cut(s) 829
BmgT120I GGNCC 2 cut(s) 251, 366
BmiI GGNNCC 5 cut(s) 79, 100, 382, 409, 712
BmrFI CCNGG 6 cut(s) 463, 558, 756, 817, 1004, 1545
BmrI ACTGGG 1 cut(s) 924
BmsI GCATC 5 cut(s) 467, 523, 643, 971, 1371
BmuI ACTGGG 1 cut(s) 924
BpmI CTGGAG 2 cut(s) 226, 579
Bpu10I CCTNAGC 1 cut(s) 1099
Bpu1102I GCTNAGC 1 cut(s) 994
BpuMI CCSGG 2 cut(s) 817, 1004
BsaJI CCNNGG 5 cut(s) 81, 239, 284, 318, 754
BsaWI WCCGGW 2 cut(s) 49, 74
Bsc4I CCNNNNNNNGG 2 cut(s) 404, 1508
Bse1I ACTGG 2 cut(s) 369, 930
Bse21I CCTNAGG 1 cut(s) 1479
Bse3DI GCAATG 1 cut(s) 4
BseBI CCWGG 4 cut(s) 463, 558, 756, 1545
BseDI CCNNGG 5 cut(s) 81, 239, 284, 318, 754
BseGI GGATG 7 cut(s) 458, 775, 907, 999, 1056, 1375, 1517
BseLI CCNNNNNNNGG 2 cut(s) 404, 1508
BseMI GCAATG 1 cut(s) 4
BseMII CTCAG 4 cut(s) 246, 1113, 1221, 1470
BseNI ACTGG 2 cut(s) 369, 930
BseSI GKGCMC 1 cut(s) 804
BseXI GCAGC 1 cut(s) 238
Bsh1236I CGCG 3 cut(s) 119, 364, 487
BshFI GGCC 3 cut(s) 368, 552, 815
BshNI GGYRCC 1 cut(s) 380
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 1 cut(s) 829
BsiSI CCGG 4 cut(s) 50, 75, 816, 1004
BslFI GGGAC 1 cut(s) 1007
BslI CCNNNNNNNGG 2 cut(s) 404, 1508
BsmAI GTCTC 2 cut(s) 51, 814
BsmBI CGTCTC 1 cut(s) 51
BsmFI GGGAC 1 cut(s) 1007
BsnI GGCC 3 cut(s) 368, 552, 815
BsoBI CYCGRG 1 cut(s) 829
Bsp1286I GDGCHC 3 cut(s) 90, 755, 804
Bsp1407I TGTACA 1 cut(s) 33
Bsp143I GATC 3 cut(s) 475, 562, 1471
Bsp1720I GCTNAGC 1 cut(s) 994
Bsp19I CCATGG 1 cut(s) 239
Bsp68I TCGCGA 1 cut(s) 119
BspACI CCGC 4 cut(s) 364, 487, 845, 1197
BspANI GGCC 3 cut(s) 368, 552, 815
BspCNI CTCAG 4 cut(s) 247, 1112, 1220, 1471
BspFNI CGCG 3 cut(s) 119, 364, 487
BspLI GGNNCC 5 cut(s) 79, 100, 382, 409, 712
BspPI GGATC 1 cut(s) 1466
BspT107I GGYRCC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 4
BsrGI TGTACA 1 cut(s) 33
BsrI ACTGG 2 cut(s) 369, 930
BssECI CCNNGG 5 cut(s) 81, 239, 284, 318, 754
BssMI GATC 3 cut(s) 475, 562, 1471
BssT1I CCWWGG 2 cut(s) 239, 318
Bst2UI CCWGG 4 cut(s) 463, 558, 756, 1545
Bst4CI ACNGT 7 cut(s) 270, 334, 353, 596, 694, 1276, 1285
Bst6I CTCTTC 1 cut(s) 149
BstAUI TGTACA 1 cut(s) 33
BstC8I GCNNGC 8 cut(s) 57, 345, 366, 399, 483, 554, 1129, 1176
BstDEI CTNAG 6 cut(s) 230, 255, 994, 1099, 1207, 1479
BstDSI CCRYGG 2 cut(s) 81, 239
BstF5I GGATG 7 cut(s) 458, 775, 907, 999, 1056, 1375, 1517
BstFNI CGCG 3 cut(s) 119, 364, 487
BstHHI GCGC 2 cut(s) 364, 487
BstKTI GATC 3 cut(s) 478, 565, 1474
BstMAI GTCTC 2 cut(s) 51, 814
BstMBI GATC 3 cut(s) 475, 562, 1471
BstNI CCWGG 4 cut(s) 463, 558, 756, 1545
BstNSI RCATGY 1 cut(s) 347
BstSCI CCNGG 6 cut(s) 461, 556, 754, 815, 1002, 1543
BstSLI GKGCMC 1 cut(s) 804
BstUI CGCG 3 cut(s) 119, 364, 487
BstV1I GCAGC 1 cut(s) 238
BstX2I RGATCY 2 cut(s) 475, 562
BstYI RGATCY 2 cut(s) 475, 562
Bsu36I CCTNAGG 1 cut(s) 1479
BsuRI GGCC 3 cut(s) 368, 552, 815
BtgI CCRYGG 2 cut(s) 81, 239
BtgZI GCGATG 1 cut(s) 24
BtsCI GGATG 7 cut(s) 458, 775, 907, 999, 1056, 1375, 1517
BtsIMutI CAGTG 5 cut(s) 275, 358, 376, 965, 1248
BtuMI TCGCGA 1 cut(s) 119
Cac8I GCNNGC 8 cut(s) 57, 345, 366, 399, 483, 554, 1129, 1176
CfoI GCGC 2 cut(s) 364, 487
Cfr13I GGNCC 2 cut(s) 251, 366
Csp6I GTAC 6 cut(s) 34, 259, 946, 1161, 1261, 1286
CviAII CATG 9 cut(s) 215, 240, 344, 377, 811, 863, 1069, 1391, 1571
CviQI GTAC 6 cut(s) 34, 259, 946, 1161, 1261, 1286
DdeI CTNAG 6 cut(s) 230, 255, 994, 1099, 1207, 1479
DpnI GATC 3 cut(s) 477, 564, 1473
DpnII GATC 3 cut(s) 475, 562, 1471
DraIII CACNNNGTG 2 cut(s) 20, 270
DrdI GACNNNNNNGTC 1 cut(s) 70
DseDI GACNNNNNNGTC 1 cut(s) 70
EaeI YGGCCR 2 cut(s) 550, 813
Eam1104I CTCTTC 1 cut(s) 149
EarI CTCTTC 1 cut(s) 149
Eco130I CCWWGG 2 cut(s) 239, 318
Eco24I GRGCYC 1 cut(s) 755
Eco32I GATATC 1 cut(s) 1168
Eco47I GGWCC 1 cut(s) 251
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 829
EcoRI GAATTC 1 cut(s) 1072
EcoRII CCWGG 4 cut(s) 461, 556, 754, 1543
EcoRV GATATC 1 cut(s) 1168
EcoT14I CCWWGG 2 cut(s) 239, 318
EcoT22I ATGCAT 2 cut(s) 6, 1386
EcoT38I GRGCYC 1 cut(s) 755
ErhI CCWWGG 2 cut(s) 239, 318
Esp3I CGTCTC 1 cut(s) 51
FaeI CATG 9 cut(s) 218, 243, 347, 380, 814, 866, 1072, 1394, 1574
FaqI GGGAC 1 cut(s) 1007
FatI CATG 9 cut(s) 214, 239, 343, 376, 810, 862, 1068, 1390, 1570
FauI CCCGC 2 cut(s) 357, 480
FblI GTMKAC 1 cut(s) 1203
Fnu4HI GCNGC 1 cut(s) 227
FokI GGATG 7 cut(s) 445, 782, 894, 986, 1063, 1362, 1524
FriOI GRGCYC 1 cut(s) 755
Fsp4HI GCNGC 1 cut(s) 227
FspBI CTAG 1 cut(s) 1047
GlaI GCGC 2 cut(s) 363, 486
GluI GCNGC 1 cut(s) 227
GsuI CTGGAG 2 cut(s) 226, 579
HaeIII GGCC 3 cut(s) 368, 552, 815
HapII CCGG 4 cut(s) 50, 75, 816, 1004
HhaI GCGC 2 cut(s) 364, 487
Hin1II CATG 9 cut(s) 218, 243, 347, 380, 814, 866, 1072, 1394, 1574
Hin6I GCGC 2 cut(s) 362, 485
HinP1I GCGC 2 cut(s) 362, 485
HincII GTYRAC 3 cut(s) 853, 1153, 1281
HindII GTYRAC 3 cut(s) 853, 1153, 1281
HindIII AAGCTT 1 cut(s) 991
HinfI GANTC 8 cut(s) 208, 702, 1091, 1200, 1256, 1322, 1372, 1527
HpaI GTTAAC 2 cut(s) 1153, 1281
HpaII CCGG 4 cut(s) 50, 75, 816, 1004
HphI GGTGA 1 cut(s) 289
Hpy166II GTNNAC 6 cut(s) 34, 607, 853, 1153, 1204, 1281
Hpy188I TCNGA 8 cut(s) 94, 247, 532, 600, 912, 942, 1380, 1526
Hpy188III TCNNGA 5 cut(s) 118, 205, 254, 829, 1478
Hpy8I GTNNAC 6 cut(s) 34, 607, 853, 1153, 1204, 1281
Hpy99I CGWCG 1 cut(s) 600
HpyAV CCTTC 2 cut(s) 320, 1242
HpyCH4III ACNGT 7 cut(s) 270, 334, 353, 596, 694, 1276, 1285
HpyCH4IV ACGT 1 cut(s) 44
HpyF3I CTNAG 6 cut(s) 230, 255, 994, 1099, 1207, 1479
HpySE526I ACGT 1 cut(s) 44
Hsp92II CATG 9 cut(s) 218, 243, 347, 380, 814, 866, 1072, 1394, 1574
HspAI GCGC 2 cut(s) 362, 485
KspAI GTTAAC 2 cut(s) 1153, 1281
Kzo9I GATC 3 cut(s) 475, 562, 1471
LmnI GCTCC 1 cut(s) 710
Lsp1109I GCAGC 1 cut(s) 238
LweI GCATC 5 cut(s) 467, 523, 643, 971, 1371
MaeI CTAG 1 cut(s) 1047
MaeII ACGT 1 cut(s) 44
MaeIII GTNAC 2 cut(s) 871, 1441
MalI GATC 3 cut(s) 477, 564, 1473
MboI GATC 3 cut(s) 475, 562, 1471
MboII GAAGA 8 cut(s) 136, 335, 449, 617, 620, 929, 1100, 1586
MfeI CAATTG 1 cut(s) 672
MflI RGATCY 2 cut(s) 475, 562
MhlI GDGCHC 3 cut(s) 90, 755, 804
MlsI TGGCCA 1 cut(s) 552
MluNI TGGCCA 1 cut(s) 552
MlyI GAGTC 3 cut(s) 217, 696, 1209
MmeI TCCRAC 4 cut(s) 385, 578, 679, 935
MnlI CCTC 8 cut(s) 22, 279, 436, 490, 534, 1474, 1485, 1567
Mox20I TGGCCA 1 cut(s) 552
Mph1103I ATGCAT 2 cut(s) 6, 1386
MscI TGGCCA 1 cut(s) 552
MseI TTAA 6 cut(s) 720, 1152, 1280, 1302, 1310, 1461
MslI CAYNNNNRTG 4 cut(s) 9, 531, 867, 1389
Msp20I TGGCCA 1 cut(s) 552
MspI CCGG 4 cut(s) 50, 75, 816, 1004
MspR9I CCNGG 6 cut(s) 463, 558, 756, 817, 1004, 1545
MunI CAATTG 1 cut(s) 672
MvaI CCWGG 4 cut(s) 463, 558, 756, 1545
MvnI CGCG 3 cut(s) 119, 364, 487
NciI CCSGG 2 cut(s) 817, 1004
NcoI CCATGG 1 cut(s) 239
NdeII GATC 3 cut(s) 475, 562, 1471
NlaIII CATG 9 cut(s) 218, 243, 347, 380, 814, 866, 1072, 1394, 1574
NlaIV GGNNCC 5 cut(s) 79, 100, 382, 409, 712
NmeAIII GCCGAG 1 cut(s) 309
NruI TCGCGA 1 cut(s) 119
NsiI ATGCAT 2 cut(s) 6, 1386
NspI RCATGY 1 cut(s) 347
PaeI GCATGC 1 cut(s) 347
PaeR7I CTCGAG 1 cut(s) 829
PfeI GAWTC 5 cut(s) 1091, 1256, 1322, 1372, 1527
PfoI TCCNGGA 1 cut(s) 1002
PkrI GCNGC 1 cut(s) 228
PleI GAGTC 3 cut(s) 216, 696, 1208
PpsI GAGTC 3 cut(s) 216, 696, 1208
PsiI TTATAA 1 cut(s) 1058
Psp6I CCWGG 4 cut(s) 461, 556, 754, 1543
PspGI CCWGG 4 cut(s) 461, 556, 754, 1543
PspN4I GGNNCC 5 cut(s) 79, 100, 382, 409, 712
PspPI GGNCC 2 cut(s) 251, 366
PsuI RGATCY 2 cut(s) 475, 562
RruI TCGCGA 1 cut(s) 119
RsaI GTAC 6 cut(s) 35, 260, 947, 1162, 1262, 1287
RsaNI GTAC 6 cut(s) 34, 259, 946, 1161, 1261, 1286
RseI CAYNNNNRTG 4 cut(s) 9, 531, 867, 1389
SaqAI TTAA 6 cut(s) 720, 1152, 1280, 1302, 1310, 1461
SatI GCNGC 1 cut(s) 227
Sau3AI GATC 3 cut(s) 475, 562, 1471
Sau96I GGNCC 2 cut(s) 251, 366
ScaI AGTACT 1 cut(s) 1162
SchI GAGTC 3 cut(s) 217, 696, 1209
ScrFI CCNGG 6 cut(s) 463, 558, 756, 817, 1004, 1545
SduI GDGCHC 3 cut(s) 90, 755, 804
SfaNI GCATC 5 cut(s) 467, 523, 643, 971, 1371
Sfr274I CTCGAG 1 cut(s) 829
SinI GGWCC 1 cut(s) 251
SlaI CTCGAG 1 cut(s) 829
SmiMI CAYNNNNRTG 4 cut(s) 9, 531, 867, 1389
SmlI CTYRAG 1 cut(s) 829
SmoI CTYRAG 1 cut(s) 829
SphI GCATGC 1 cut(s) 347
SsiI CCGC 4 cut(s) 364, 487, 845, 1197
SspI AATATT 1 cut(s) 1580
SspMI CTAG 1 cut(s) 1047
StyD4I CCNGG 6 cut(s) 461, 556, 754, 815, 1002, 1543
StyI CCWWGG 2 cut(s) 239, 318
TaaI ACNGT 7 cut(s) 270, 334, 353, 596, 694, 1276, 1285
TaiI ACGT 1 cut(s) 47
TaqI TCGA 5 cut(s) 132, 170, 705, 830, 1265
TatI WGTACW 4 cut(s) 33, 258, 1160, 1285
TfiI GAWTC 5 cut(s) 1091, 1256, 1322, 1372, 1527
Tru1I TTAA 6 cut(s) 720, 1152, 1280, 1302, 1310, 1461
Tru9I TTAA 6 cut(s) 720, 1152, 1280, 1302, 1310, 1461
TscAI CASTG 5 cut(s) 275, 358, 376, 972, 1255
TseI GCWGC 1 cut(s) 226
TspDTI ATGAA 8 cut(s) 365, 450, 597, 1050, 1085, 1269, 1335, 1587
TspGWI ACGGA 1 cut(s) 70
TspRI CASTG 5 cut(s) 275, 358, 376, 972, 1255
VpaK11BI GGWCC 1 cut(s) 251
XapI RAATTY 3 cut(s) 292, 838, 1072
XceI RCATGY 1 cut(s) 347
XhoI CTCGAG 1 cut(s) 829
XmiI GTMKAC 1 cut(s) 1203
XspI CTAG 1 cut(s) 1047
ZrmI AGTACT 1 cut(s) 1162
Zsp2I ATGCAT 2 cut(s) 6, 1386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.