Rmu_sc0002717.1_g000015

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002717.1
OG0000320
Physical Location & Seq
Forward (+)
68939 .. 75248
6310 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002717.1_g000015.1.cds

Sequence Viewer

Length: 1731 bp
atgattccttctaacattccacaaccttcccaccgaaaggacaacattgtaacaccagttcgccggtggtatgggtgcagggaagcagcgtactggtgctctgggttacggggctgcttagcggtgctcggggtcgcagtgtactgcagagctgctgagcaggctgccggcgttcgaggctggcggggctgcgaggctgatgggctacgtggcaaaacgtgcggcagcagcaagggctggtgtgcgggttgcaggcgtctgggcgcgggggcgctggggaggaggctggccgggcctggctgctcggtttgcaggtgctgctgggcgcgggggcgctgggaggaggccgcctatgaacaaatcaatagggaagaattagatgacttgatttcaggagaagatttagtctctccaactagagtcaaggtgttagagtacaatgaagagatggaaattgttttggagattttgacaacgagacagacccctgaagggtataatttgattgatccaccaaagttaactatgtttcagtcccaaagaaagggtgggttgctatcagattcaaaggcagtaatccagttggggtatgaacacggtgatgatagtgaaaaatggtggcacgccagagatgagcatacgcagagcacttccattcttgcctccatgtcatggttcacctgccaccgtgttcgagcagtttcaccacaaattcagggtctggttatggcactgtcatttggatcgacatttcagttggggtatgaacactgtgatgatagtgaaaaatggtggcacgccagagacgagcatacgcagaccacctccatacttgcctccatgtcatgggaagaattagatgacttgatttcaggagaagatttagtctctccaactagagtcaaggtgttagagtacaatgaagaggtggaaatagtgtttcagggtactaacgtaaatgcatctcatgagtcagcatatgcattgggattgcaatctgtgttgcaatccttgagggtctggttatggcactgtcacttggatcgacatttcagttggggtatgaacactgtgatgatagtgaaaaatggttgcacgccagagacgagcatacccagaccacctccatactttcctccatgtaatggttcacctgccaccgtgttcgagcaggaagaattagatgacttgatttcaggagaagatttagtctctccaactagagtcaaggtgttagagtacaatgaagaggtggaaatagtatttcagggtactaatttgcttgatgcatctgaggatcatccaatgcacttgcacgtcccaaagaaacggtgggttgctatcagattcaaaggcagtaatccaggggtctggttatggcactgtcatttggatcgacatttcagttggggtatgaacactgtgatgatagtgaaaaatggtggcacgccagagacgagcatacgcagaccacctccatacttgcctccatgtcatggttcacctgccaccgtgttcgagcaggaagaattagatgacttgatttcaggagaagatttagtctctccaactagagtcaaggtgttagagtacaatgaagaggtggaaattgtatttcagggtactaatttgcttgatgcatctgaggatcatccaatgcacttgcacggttatagtttttatgtagttggatcaggttttggagattttgacaacgagacagacccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

576

Amino Acids

64.82

Weight (kDa)

5.18

Isoelectric Point (pI)

53.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 4 cut(s) 303, 689, 1162, 1513
Acc36I ACCTGC 4 cut(s) 303, 689, 1162, 1513
AccB7I CCANNNNNTGG 4 cut(s) 672, 846, 1145, 1496
AccII CGCG 2 cut(s) 266, 328
AciI CCGC 7 cut(s) 122, 184, 222, 245, 266, 328, 348
AclWI GGATC 7 cut(s) 503, 751, 1050, 1305, 1401, 1656, 1699
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 1 cut(s) 711
AcuI CTGAAG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 256
AfaI GTAC 9 cut(s) 92, 143, 437, 917, 949, 1241, 1273, 1592, 1624
AfiI CCNNNNNNNGG 7 cut(s) 37, 492, 544, 672, 846, 1145, 1496
AgsI TTSAA 2 cut(s) 567, 1351
AjiI CACGTC 1 cut(s) 1318
AjnI CCWGG 2 cut(s) 295, 1363
AluBI AGCT 1 cut(s) 152
AluI AGCT 1 cut(s) 152
Alw21I GWGCWC 3 cut(s) 101, 129, 650
Alw26I GTCTC 9 cut(s) 412, 472, 798, 892, 1097, 1216, 1448, 1567, 1712
AlwI GGATC 7 cut(s) 503, 751, 1050, 1305, 1401, 1656, 1699
AlwNI CAGNNNCTG 2 cut(s) 318, 721
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 3 cut(s) 288, 293, 345
ApeKI GCWGC 9 cut(s) 86, 114, 152, 164, 189, 225, 228, 300, 318
ApoI RAATTY 1 cut(s) 711
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
AspLEI GCGC 4 cut(s) 266, 274, 328, 336
AspS9I GGNCC 1 cut(s) 293
AsuC2I CCSGG 1 cut(s) 292
AsuHPI GGTGA 5 cut(s) 611, 670, 696, 1143, 1494
AvaI CYCGRG 1 cut(s) 128
BaeI ACNNNNGTAYC 2 cut(s) 939, 972
Bbv12I GWGCWC 3 cut(s) 101, 129, 650
BbvI GCAGC 9 cut(s) 98, 101, 139, 151, 176, 237, 240, 287, 305
BccI CCATC 2 cut(s) 194, 442
BciT130I CCWGG 2 cut(s) 297, 1365
BcnI CCSGG 1 cut(s) 292
BcoDI GTCTC 9 cut(s) 412, 472, 798, 892, 1097, 1216, 1448, 1567, 1712
BfaI CTAG 4 cut(s) 417, 897, 1221, 1572
BfmI CTRYAG 1 cut(s) 145
BfoI RGCGCY 2 cut(s) 275, 337
BfuAI ACCTGC 4 cut(s) 303, 689, 1162, 1513
BlpI GCTNAGC 2 cut(s) 118, 156
Bme1390I CCNGG 3 cut(s) 292, 297, 1365
BmeT110I CYCGRG 1 cut(s) 128
BmgBI CACGTC 1 cut(s) 1318
BmgT120I GGNCC 1 cut(s) 293
BmrFI CCNGG 3 cut(s) 292, 297, 1365
BmsI GCATC 5 cut(s) 971, 1276, 1298, 1627, 1649
Bpu1102I GCTNAGC 2 cut(s) 118, 156
BpuEI CTTGAG 1 cut(s) 1033
BpuMI CCSGG 1 cut(s) 292
BsaAI YACGTR 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 994
BsaHI GRCGYC 1 cut(s) 256
BsaJI CCNNGG 1 cut(s) 1364
Bsc4I CCNNNNNNNGG 7 cut(s) 37, 492, 544, 672, 846, 1145, 1496
Bse118I RCCGGY 2 cut(s) 63, 167
Bse1I ACTGG 3 cut(s) 56, 98, 580
Bse8I GATNNNNATC 1 cut(s) 994
BseBI CCWGG 2 cut(s) 297, 1365
BseDI CCNNGG 1 cut(s) 1364
BseGI GGATG 2 cut(s) 1300, 1651
BseJI GATNNNNATC 1 cut(s) 994
BseLI CCNNNNNNNGG 7 cut(s) 37, 492, 544, 672, 846, 1145, 1496
BseMII CTCAG 3 cut(s) 147, 1284, 1635
BseNI ACTGG 3 cut(s) 56, 98, 580
BseRI GAGGAG 2 cut(s) 295, 356
BseXI GCAGC 9 cut(s) 98, 101, 139, 151, 176, 237, 240, 287, 305
BseYI CCCAGC 3 cut(s) 274, 321, 336
BsgI GTGCAG 1 cut(s) 97
Bsh1236I CGCG 2 cut(s) 266, 328
BshFI GGCC 3 cut(s) 290, 295, 347
BsiHKAI GWGCWC 3 cut(s) 101, 129, 650
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 3 cut(s) 64, 168, 291
BslFI GGGAC 2 cut(s) 520, 1304
BslI CCNNNNNNNGG 7 cut(s) 37, 492, 544, 672, 846, 1145, 1496
BsmAI GTCTC 9 cut(s) 412, 472, 798, 892, 1097, 1216, 1448, 1567, 1712
BsmBI CGTCTC 3 cut(s) 798, 1097, 1448
BsmFI GGGAC 2 cut(s) 520, 1304
BsnI GGCC 3 cut(s) 290, 295, 347
BsoBI CYCGRG 1 cut(s) 128
Bsp1286I GDGCHC 3 cut(s) 101, 129, 650
Bsp143I GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
Bsp1720I GCTNAGC 2 cut(s) 118, 156
BspACI CCGC 7 cut(s) 122, 184, 222, 245, 266, 328, 348
BspANI GGCC 3 cut(s) 290, 295, 347
BspCNI CTCAG 3 cut(s) 148, 1285, 1636
BspFNI CGCG 2 cut(s) 266, 328
BspHI TCATGA 1 cut(s) 967
BspMAI CTGCAG 1 cut(s) 149
BspMI ACCTGC 4 cut(s) 303, 689, 1162, 1513
BspPI GGATC 7 cut(s) 503, 751, 1050, 1305, 1401, 1656, 1699
BsrFI RCCGGY 2 cut(s) 63, 167
BsrI ACTGG 3 cut(s) 56, 98, 580
BssAI RCCGGY 2 cut(s) 63, 167
BssECI CCNNGG 1 cut(s) 1364
BssMI GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
BssNI GRCGYC 1 cut(s) 256
Bst2UI CCWGG 2 cut(s) 297, 1365
Bst6I CTCTTC 4 cut(s) 438, 918, 1242, 1593
BstACI GRCGYC 1 cut(s) 256
BstAPI GCANNNNNTGC 2 cut(s) 219, 318
BstBAI YACGTR 1 cut(s) 209
BstC8I GCNNGC 9 cut(s) 162, 169, 182, 254, 288, 624, 798, 1097, 1448
BstDEI CTNAG 4 cut(s) 118, 156, 1293, 1644
BstF5I GGATG 2 cut(s) 1300, 1651
BstFNI CGCG 2 cut(s) 266, 328
BstH2I RGCGCY 2 cut(s) 275, 337
BstHHI GCGC 4 cut(s) 266, 274, 328, 336
BstKTI GATC 7 cut(s) 511, 746, 1045, 1300, 1396, 1651, 1694
BstMAI GTCTC 9 cut(s) 412, 472, 798, 892, 1097, 1216, 1448, 1567, 1712
BstMBI GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
BstMWI GCNNNNNNNGC 9 cut(s) 161, 177, 186, 219, 228, 234, 292, 309, 318
BstNI CCWGG 2 cut(s) 297, 1365
BstSCI CCNGG 3 cut(s) 290, 295, 1363
BstSFI CTRYAG 1 cut(s) 145
BstUI CGCG 2 cut(s) 266, 328
BstV1I GCAGC 9 cut(s) 98, 101, 139, 151, 176, 237, 240, 287, 305
BstXI CCANNNNNNTGG 1 cut(s) 1371
BsuRI GGCC 3 cut(s) 290, 295, 347
BtrI CACGTC 1 cut(s) 1318
BtsCI GGATG 2 cut(s) 1300, 1651
BtsI GCAGTG 1 cut(s) 144
BtsIMutI CAGTG 7 cut(s) 144, 731, 769, 1030, 1068, 1381, 1419
BveI ACCTGC 4 cut(s) 303, 689, 1162, 1513
Cac8I GCNNGC 9 cut(s) 162, 169, 182, 254, 288, 624, 798, 1097, 1448
CaiI CAGNNNCTG 2 cut(s) 318, 721
CciI TCATGA 1 cut(s) 967
CfoI GCGC 4 cut(s) 266, 274, 328, 336
Cfr10I RCCGGY 2 cut(s) 63, 167
Cfr13I GGNCC 1 cut(s) 293
CseI GACGC 1 cut(s) 245
Csp6I GTAC 9 cut(s) 91, 142, 436, 916, 948, 1240, 1272, 1591, 1623
CviAII CATG 8 cut(s) 667, 672, 841, 846, 968, 1140, 1491, 1496
CviQI GTAC 9 cut(s) 91, 142, 436, 916, 948, 1240, 1272, 1591, 1623
DdeI CTNAG 4 cut(s) 118, 156, 1293, 1644
DpnI GATC 7 cut(s) 510, 745, 1044, 1299, 1395, 1650, 1693
DpnII GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 4 cut(s) 438, 918, 1242, 1593
EarI CTCTTC 4 cut(s) 438, 918, 1242, 1593
Eco57I CTGAAG 1 cut(s) 510
Eco88I CYCGRG 1 cut(s) 128
EcoRII CCWGG 2 cut(s) 295, 1363
EcoT22I ATGCAT 4 cut(s) 964, 985, 1291, 1642
Esp3I CGTCTC 3 cut(s) 798, 1097, 1448
FaeI CATG 8 cut(s) 670, 675, 844, 849, 971, 1143, 1494, 1499
FaqI GGGAC 2 cut(s) 520, 1304
FatI CATG 8 cut(s) 666, 671, 840, 845, 967, 1139, 1490, 1495
FauI CCCGC 4 cut(s) 177, 238, 259, 321
FauNDI CATATG 1 cut(s) 979
FokI GGATG 2 cut(s) 1287, 1638
FspBI CTAG 4 cut(s) 417, 897, 1221, 1572
GlaI GCGC 4 cut(s) 265, 273, 327, 335
GsaI CCCAGC 3 cut(s) 278, 325, 340
HaeII RGCGCY 2 cut(s) 275, 337
HaeIII GGCC 3 cut(s) 290, 295, 347
HapII CCGG 3 cut(s) 64, 168, 291
HgaI GACGC 1 cut(s) 245
HhaI GCGC 4 cut(s) 266, 274, 328, 336
Hin1I GRCGYC 1 cut(s) 256
Hin1II CATG 8 cut(s) 670, 675, 844, 849, 971, 1143, 1494, 1499
Hin6I GCGC 4 cut(s) 264, 272, 326, 334
HinP1I GCGC 4 cut(s) 264, 272, 326, 334
HincII GTYRAC 1 cut(s) 522
HindII GTYRAC 1 cut(s) 522
HinfI GANTC 8 cut(s) 4, 420, 563, 900, 971, 1224, 1347, 1575
HpaI GTTAAC 1 cut(s) 522
HpaII CCGG 3 cut(s) 64, 168, 291
HphI GGTGA 5 cut(s) 611, 670, 696, 1143, 1494
Hpy166II GTNNAC 5 cut(s) 142, 522, 678, 1151, 1502
Hpy188I TCNGA 4 cut(s) 562, 1294, 1346, 1645
Hpy188III TCNNGA 5 cut(s) 393, 873, 968, 1197, 1548
Hpy8I GTNNAC 5 cut(s) 142, 522, 678, 1151, 1502
HpyAV CCTTC 3 cut(s) 18, 36, 485
HpyCH4IV ACGT 4 cut(s) 208, 218, 954, 1317
HpyF10VI GCNNNNNNNGC 9 cut(s) 161, 177, 186, 219, 228, 234, 292, 309, 318
HpyF3I CTNAG 4 cut(s) 118, 156, 1293, 1644
HpySE526I ACGT 4 cut(s) 208, 218, 954, 1317
Hsp92I GRCGYC 1 cut(s) 256
Hsp92II CATG 8 cut(s) 670, 675, 844, 849, 971, 1143, 1494, 1499
HspAI GCGC 4 cut(s) 264, 272, 326, 334
KroI GCCGGC 1 cut(s) 167
KroNI GCCGGC 1 cut(s) 169
KspAI GTTAAC 1 cut(s) 522
Kzo9I GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
Lsp1109I GCAGC 9 cut(s) 98, 101, 139, 151, 176, 237, 240, 287, 305
LweI GCATC 5 cut(s) 971, 1276, 1298, 1627, 1649
MaeI CTAG 4 cut(s) 417, 897, 1221, 1572
MaeII ACGT 4 cut(s) 208, 218, 954, 1317
MaeIII GTNAC 3 cut(s) 49, 105, 1034
MalI GATC 7 cut(s) 510, 745, 1044, 1299, 1395, 1650, 1693
MboI GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
MhlI GDGCHC 3 cut(s) 101, 129, 650
MlyI GAGTC 5 cut(s) 429, 909, 980, 1233, 1584
MmeI TCCRAC 5 cut(s) 437, 917, 1241, 1592, 1669
Mph1103I ATGCAT 4 cut(s) 964, 985, 1291, 1642
MroNI GCCGGC 1 cut(s) 167
MseI TTAA 1 cut(s) 521
MslI CAYNNNNRTG 4 cut(s) 600, 774, 1073, 1424
MspI CCGG 3 cut(s) 64, 168, 291
MspR9I CCNGG 3 cut(s) 292, 297, 1365
MvaI CCWGG 2 cut(s) 297, 1365
MvnI CGCG 2 cut(s) 266, 328
MwoI GCNNNNNNNGC 9 cut(s) 161, 177, 186, 219, 228, 234, 292, 309, 318
NaeI GCCGGC 1 cut(s) 169
NciI CCSGG 1 cut(s) 292
NdeI CATATG 1 cut(s) 979
NdeII GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
NgoMIV GCCGGC 1 cut(s) 167
NlaIII CATG 8 cut(s) 670, 675, 844, 849, 971, 1143, 1494, 1499
NmuCI GTSAC 1 cut(s) 1034
NsiI ATGCAT 4 cut(s) 964, 985, 1291, 1642
PagI TCATGA 1 cut(s) 967
PaqCI CACCTGC 4 cut(s) 303, 689, 1162, 1513
PcsI WCGNNNNNNNCGW 3 cut(s) 804, 1103, 1454
PdiI GCCGGC 1 cut(s) 169
PfeI GAWTC 3 cut(s) 4, 563, 1347
PflMI CCANNNNNTGG 4 cut(s) 672, 846, 1145, 1496
PleI GAGTC 5 cut(s) 428, 908, 979, 1232, 1583
PpsI GAGTC 5 cut(s) 428, 908, 979, 1232, 1583
Ppu21I YACGTR 1 cut(s) 209
Psp6I CCWGG 2 cut(s) 295, 1363
PspFI CCCAGC 3 cut(s) 274, 321, 336
PspGI CCWGG 2 cut(s) 295, 1363
PspPI GGNCC 1 cut(s) 293
PsrI GAACNNNNNNTAC 2 cut(s) 42, 74
PstI CTGCAG 1 cut(s) 149
PstNI CAGNNNCTG 2 cut(s) 318, 721
RsaI GTAC 9 cut(s) 92, 143, 437, 917, 949, 1241, 1273, 1592, 1624
RsaNI GTAC 9 cut(s) 91, 142, 436, 916, 948, 1240, 1272, 1591, 1623
RseI CAYNNNNRTG 4 cut(s) 600, 774, 1073, 1424
SaqAI TTAA 1 cut(s) 521
Sau3AI GATC 7 cut(s) 508, 743, 1042, 1297, 1393, 1648, 1691
Sau96I GGNCC 1 cut(s) 293
SchI GAGTC 5 cut(s) 429, 909, 980, 1233, 1584
ScrFI CCNGG 3 cut(s) 292, 297, 1365
SduI GDGCHC 3 cut(s) 101, 129, 650
SfaNI GCATC 5 cut(s) 971, 1276, 1298, 1627, 1649
SfcI CTRYAG 1 cut(s) 145
SgrAI CRCCGGYG 1 cut(s) 63
SmiMI CAYNNNNRTG 4 cut(s) 600, 774, 1073, 1424
SmlI CTYRAG 1 cut(s) 1012
SmoI CTYRAG 1 cut(s) 1012
SsiI CCGC 7 cut(s) 122, 184, 222, 245, 266, 328, 348
SspMI CTAG 4 cut(s) 417, 897, 1221, 1572
StyD4I CCNGG 3 cut(s) 290, 295, 1363
TaiI ACGT 4 cut(s) 211, 221, 957, 1320
TaqI TCGA 7 cut(s) 175, 694, 746, 1045, 1167, 1396, 1518
TatI WGTACW 5 cut(s) 141, 435, 915, 1239, 1590
TauI GCSGC 2 cut(s) 225, 350
TfiI GAWTC 3 cut(s) 4, 563, 1347
Tru1I TTAA 1 cut(s) 521
Tru9I TTAA 1 cut(s) 521
TscAI CASTG 7 cut(s) 144, 738, 776, 1037, 1075, 1388, 1426
TseFI GTSAC 1 cut(s) 1034
TseI GCWGC 9 cut(s) 86, 114, 152, 164, 189, 225, 228, 300, 318
Tsp45I GTSAC 1 cut(s) 1034
TspDTI ATGAA 9 cut(s) 369, 456, 606, 780, 936, 1079, 1260, 1430, 1611
TspRI CASTG 7 cut(s) 144, 738, 776, 1037, 1075, 1388, 1426
Van91I CCANNNNNTGG 4 cut(s) 672, 846, 1145, 1496
XapI RAATTY 1 cut(s) 711
XcmI CCANNNNNNNNNTGG 3 cut(s) 63, 545, 1329
XspI CTAG 4 cut(s) 417, 897, 1221, 1572
Zsp2I ATGCAT 4 cut(s) 964, 985, 1291, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.