Rmu_sc0002231.1_g000002

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002231.1
OG0000320
Physical Location & Seq
Reverse (-)
2183 .. 5001
2819 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002231.1_g000002.1.cds

Sequence Viewer

Length: 1419 bp
atgaggcgtctccgagcttctcggagcgaccttggttttcgaaacctaggtttcgaattggcggcggcgatcttccctcaggcaaggctatctttcctcaggcaaggcgacgatcgtggagtgacaagatgcggtggcgccgagcggggcctcggcgttgatcttgagtggcgacgcgaggtctctaggttggaggcctcgctgaccgtgttttttgttgggttagatccggtcttcgagtgccgtgcatcgtcgacagaggtggttgtcgactctgattgctacaactttggtggacggtttgatgatgtgggtaggaaggccgccggaaatggcaatggtggaggcagagtggcagaagaggatggactggaatgcttctcccttgtgggcttggatttggacggtccatcttacatcacacagtgtccaatcccacctggaacaaacttcacctatgaagtattattgtccatagaagaaggaactctatggtggcatgcacatagtgattggactagagctactgttcatggtgcttttgttatcttgcctgctataggaaccacattcccatttccgcaacctgatgaagacgaagttcttgtaattgcatcttggtacacaggagatataaaagaacttattgatgagtctatacaaaatggtaccgacttaccccattcagatgcttacactttaaatggccagccaggagatttttgtgcatgctccaatggaacagcgtatcgtcgtatagtggattacggcaagacatatcttcttcgtatagtcaacggaaacatgaatgcagaacacttctttgccgttgcagagcatagtctcactgtggttggactagatggagcctacataaaacccataaacactgcctacatagtcataagtcctggacaaacgatggatgtcttgctagtagcaaaccagtctcttggccaatattatatggctattagacaatactcaagtgagaacattgcagtcactagatttgaccatgcaaatgttactgcaatccttgaatacagaggcgactatacatatgagacatctcctgtatttccatctactcttcctatgtacttggacaaagcagcagcactcaaattcacataccaacttagaagcttggctactccagagtaccctgtggatgttccactcgacatcactactagaatgtatattacggtgtcgatgaatgtacttccttgtgaccatgcaggctgtgaaataactgagaatatcgcttcaagcctaaataatgttagttgggtcgacacaaaaccaactaccaatgtcttggaagcctactacaggttcttcctcttctctctacatttcatgcatcttatttgtgagagaaaagtgagatttaattactacatccttcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

472

Amino Acids

52.65

Weight (kDa)

4.9

Isoelectric Point (pI)

35.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 2 cut(s) 137, 668
AccBSI CCGCTC 1 cut(s) 145
AccI GTMKAC 3 cut(s) 254, 270, 1299
AccII CGCG 1 cut(s) 177
AciI CCGC 6 cut(s) 62, 65, 132, 145, 324, 581
AclWI GGATC 1 cut(s) 221
AcoI YGGCCR 2 cut(s) 706, 955
AcsI RAATTY 1 cut(s) 1127
AcyI GRCGYC 2 cut(s) 7, 138
AdeI CACNNNGTG 2 cut(s) 426, 509
AfaI GTAC 5 cut(s) 623, 670, 1103, 1166, 1227
AfiI CCNNNNNNNGG 2 cut(s) 560, 1338
AgsI TTSAA 3 cut(s) 1043, 1275, 1415
AhdI GACNNNNNGTC 1 cut(s) 179
AjnI CCWGG 3 cut(s) 439, 712, 910
AluBI AGCT 3 cut(s) 17, 524, 1149
AluI AGCT 3 cut(s) 17, 524, 1149
Alw26I GTCTC 5 cut(s) 14, 187, 848, 954, 1061
AlwI GGATC 1 cut(s) 221
AoxI GGCC 5 cut(s) 148, 195, 321, 706, 955
ApeKI GCWGC 2 cut(s) 1115, 1118
ApoI RAATTY 1 cut(s) 1127
Asp718I GGTACC 1 cut(s) 668
AspA2I CCTAGG 1 cut(s) 46
AspLEI GCGC 1 cut(s) 140
AspS9I GGNCC 2 cut(s) 148, 407
AsuHPI GGTGA 1 cut(s) 445
AsuII TTCGAA 2 cut(s) 40, 54
AvaII GGWCC 1 cut(s) 407
AvrII CCTAGG 1 cut(s) 46
AxyI CCTNAGG 2 cut(s) 78, 98
BalI TGGCCA 2 cut(s) 708, 957
BanI GGYRCC 2 cut(s) 137, 668
BarI GAAGNNNNNNTAC 2 cut(s) 1138, 1170
BbsI GAAGAC 2 cut(s) 226, 600
BbvI GCAGC 2 cut(s) 1127, 1130
BccI CCATC 5 cut(s) 359, 418, 857, 916, 1093
BceAI ACGGC 3 cut(s) 228, 784, 812
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 3 cut(s) 441, 714, 912
BcoDI GTCTC 5 cut(s) 14, 187, 848, 954, 1061
BfaI CTAG 7 cut(s) 47, 186, 519, 860, 935, 1008, 1197
BfmI CTRYAG 2 cut(s) 558, 1336
BfoI RGCGCY 1 cut(s) 141
BisI GCNGC 5 cut(s) 63, 66, 324, 1116, 1119
BlnI CCTAGG 1 cut(s) 46
BlsI GCNGC 5 cut(s) 64, 67, 325, 1117, 1120
Bme1390I CCNGG 3 cut(s) 441, 714, 912
Bme18I GGWCC 1 cut(s) 407
BmeRI GACNNNNNGTC 1 cut(s) 179
BmgT120I GGNCC 2 cut(s) 148, 407
BmiI GGNNCC 5 cut(s) 139, 149, 565, 670, 868
BmrFI CCNGG 3 cut(s) 441, 714, 912
BmsI GCATC 5 cut(s) 119, 257, 623, 679, 1378
BpiI GAAGAC 2 cut(s) 226, 600
BpmI CTGGAG 1 cut(s) 1143
Bpu14I TTCGAA 2 cut(s) 40, 54
BpuEI CTTGAG 2 cut(s) 185, 970
BsaHI GRCGYC 2 cut(s) 7, 138
BsaI GGTCTC 1 cut(s) 187
BsaJI CCNNGG 3 cut(s) 31, 46, 151
BsaWI WCCGGW 1 cut(s) 229
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 2 cut(s) 560, 1338
Bse1I ACTGG 2 cut(s) 375, 946
Bse21I CCTNAGG 2 cut(s) 78, 98
Bse3DI GCAATG 2 cut(s) 343, 996
BseBI CCWGG 3 cut(s) 441, 714, 912
BseDI CCNNGG 3 cut(s) 31, 46, 151
BseGI GGATG 4 cut(s) 370, 931, 1180, 1407
BseLI CCNNNNNNNGG 2 cut(s) 560, 1338
BseMI GCAATG 2 cut(s) 343, 996
BseMII CTCAG 3 cut(s) 92, 112, 1251
BseNI ACTGG 2 cut(s) 375, 946
BseXI GCAGC 2 cut(s) 1127, 1130
Bsh1236I CGCG 1 cut(s) 177
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 5 cut(s) 150, 197, 323, 708, 957
BshNI GGYRCC 2 cut(s) 137, 668
BsiEI CGRYCG 1 cut(s) 115
BsiSI CCGG 2 cut(s) 230, 327
BslI CCNNNNNNNGG 2 cut(s) 560, 1338
BsmAI GTCTC 5 cut(s) 14, 187, 848, 954, 1061
BsmBI CGTCTC 1 cut(s) 14
BsmI GAATGC 2 cut(s) 380, 814
BsnI GGCC 5 cut(s) 150, 197, 323, 708, 957
Bso31I GGTCTC 1 cut(s) 187
Bsp119I TTCGAA 2 cut(s) 40, 54
Bsp143I GATC 4 cut(s) 69, 112, 160, 226
BspACI CCGC 6 cut(s) 62, 65, 132, 145, 324, 581
BspANI GGCC 5 cut(s) 150, 197, 323, 708, 957
BspCNI CTCAG 3 cut(s) 91, 111, 1252
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 5 cut(s) 139, 149, 565, 670, 868
BspPI GGATC 1 cut(s) 221
BspT104I TTCGAA 2 cut(s) 40, 54
BspT107I GGYRCC 2 cut(s) 137, 668
BspTNI GGTCTC 1 cut(s) 187
BsrBI CCGCTC 1 cut(s) 145
BsrDI GCAATG 2 cut(s) 343, 996
BsrI ACTGG 2 cut(s) 375, 946
BssECI CCNNGG 3 cut(s) 31, 46, 151
BssMI GATC 4 cut(s) 69, 112, 160, 226
BssNI GRCGYC 2 cut(s) 7, 138
BssT1I CCWWGG 2 cut(s) 31, 46
Bst2UI CCWGG 3 cut(s) 441, 714, 912
Bst4CI ACNGT 7 cut(s) 208, 300, 407, 426, 529, 850, 1213
Bst6I CTCTTC 3 cut(s) 354, 1098, 1355
BstACI GRCGYC 2 cut(s) 7, 138
BstBI TTCGAA 2 cut(s) 40, 54
BstC8I GCNNGC 5 cut(s) 501, 555, 710, 730, 1246
BstDEI CTNAG 4 cut(s) 78, 98, 1142, 1260
BstENI CCTNNNNNAGG 2 cut(s) 558, 1336
BstF5I GGATG 4 cut(s) 370, 931, 1180, 1407
BstFNI CGCG 1 cut(s) 177
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 1 cut(s) 140
BstKTI GATC 4 cut(s) 72, 115, 163, 229
BstMAI GTCTC 5 cut(s) 14, 187, 848, 954, 1061
BstMBI GATC 4 cut(s) 69, 112, 160, 226
BstMCI CGRYCG 1 cut(s) 115
BstNI CCWGG 3 cut(s) 441, 714, 912
BstNSI RCATGY 2 cut(s) 503, 732
BstSCI CCNGG 3 cut(s) 439, 712, 910
BstSFI CTRYAG 2 cut(s) 558, 1336
BstUI CGCG 1 cut(s) 177
BstV1I GCAGC 2 cut(s) 1127, 1130
BstV2I GAAGAC 2 cut(s) 226, 600
BstX2I RGATCY 1 cut(s) 226
BstXI CCANNNNNNTGG 2 cut(s) 953, 1324
BstYI RGATCY 1 cut(s) 226
Bsu36I CCTNAGG 2 cut(s) 78, 98
BsuRI GGCC 5 cut(s) 150, 197, 323, 708, 957
BtsCI GGATG 4 cut(s) 370, 931, 1180, 1407
BtsI GCAGTG 1 cut(s) 888
BtsIMutI CAGTG 3 cut(s) 431, 846, 888
Cac8I GCNNGC 5 cut(s) 501, 555, 710, 730, 1246
CfoI GCGC 1 cut(s) 140
Cfr13I GGNCC 2 cut(s) 148, 407
CseI GACGC 1 cut(s) 183
Csp6I GTAC 5 cut(s) 622, 669, 1102, 1165, 1226
CspCI CAANNNNNGTGG 2 cut(s) 274, 309
CviAII CATG 7 cut(s) 500, 533, 729, 805, 1019, 1241, 1366
CviQI GTAC 5 cut(s) 622, 669, 1102, 1165, 1226
DdeI CTNAG 4 cut(s) 78, 98, 1142, 1260
DinI GGCGCC 1 cut(s) 139
DpnI GATC 4 cut(s) 71, 114, 162, 228
DpnII GATC 4 cut(s) 69, 112, 160, 226
DraI TTTAAA 1 cut(s) 702
DraIII CACNNNGTG 2 cut(s) 426, 509
DriI GACNNNNNGTC 1 cut(s) 179
EaeI YGGCCR 2 cut(s) 706, 955
Eam1104I CTCTTC 3 cut(s) 354, 1098, 1355
Eam1105I GACNNNNNGTC 1 cut(s) 179
EarI CTCTTC 3 cut(s) 354, 1098, 1355
Eco130I CCWWGG 2 cut(s) 31, 46
Eco147I AGGCCT 1 cut(s) 197
Eco31I GGTCTC 1 cut(s) 187
Eco47I GGWCC 1 cut(s) 407
Eco81I CCTNAGG 2 cut(s) 78, 98
EcoNI CCTNNNNNAGG 2 cut(s) 558, 1336
EcoO109I RGGNCCY 1 cut(s) 148
EcoRII CCWGG 3 cut(s) 439, 712, 910
EcoT14I CCWWGG 2 cut(s) 31, 46
EcoT22I ATGCAT 1 cut(s) 1371
EgeI GGCGCC 1 cut(s) 139
EheI GGCGCC 1 cut(s) 139
ErhI CCWWGG 2 cut(s) 31, 46
Esp3I CGTCTC 1 cut(s) 14
FaeI CATG 7 cut(s) 503, 536, 732, 808, 1022, 1244, 1369
FalI AAGNNNNNCTT 2 cut(s) 76, 108
FatI CATG 7 cut(s) 499, 532, 728, 804, 1018, 1240, 1365
FauI CCCGC 1 cut(s) 138
FauNDI CATATG 1 cut(s) 1063
FblI GTMKAC 3 cut(s) 254, 270, 1299
Fnu4HI GCNGC 5 cut(s) 63, 66, 324, 1116, 1119
FokI GGATG 4 cut(s) 377, 938, 1187, 1394
Fsp4HI GCNGC 5 cut(s) 63, 66, 324, 1116, 1119
FspBI CTAG 7 cut(s) 47, 186, 519, 860, 935, 1008, 1197
GlaI GCGC 1 cut(s) 139
GluI GCNGC 5 cut(s) 63, 66, 324, 1116, 1119
GsuI CTGGAG 1 cut(s) 1143
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 5 cut(s) 150, 197, 323, 708, 957
HapII CCGG 2 cut(s) 230, 327
HgaI GACGC 1 cut(s) 183
HhaI GCGC 1 cut(s) 140
Hin1I GRCGYC 2 cut(s) 7, 138
Hin1II CATG 7 cut(s) 503, 536, 732, 808, 1022, 1244, 1369
Hin6I GCGC 1 cut(s) 138
HinP1I GCGC 1 cut(s) 138
HincII GTYRAC 4 cut(s) 255, 271, 796, 1300
HindII GTYRAC 4 cut(s) 255, 271, 796, 1300
HindIII AAGCTT 1 cut(s) 1147
HinfI GANTC 2 cut(s) 272, 653
HpaII CCGG 2 cut(s) 230, 327
HphI GGTGA 1 cut(s) 445
Hpy166II GTNNAC 6 cut(s) 255, 271, 296, 624, 796, 1300
Hpy188I TCNGA 4 cut(s) 14, 24, 277, 688
Hpy188III TCNNGA 2 cut(s) 164, 1160
Hpy8I GTNNAC 6 cut(s) 255, 271, 296, 624, 796, 1300
Hpy99I CGWCG 4 cut(s) 113, 177, 256, 756
HpyAV CCTTC 2 cut(s) 313, 476
HpyCH4III ACNGT 7 cut(s) 208, 300, 407, 426, 529, 850, 1213
HpyF3I CTNAG 4 cut(s) 78, 98, 1142, 1260
Hsp92I GRCGYC 2 cut(s) 7, 138
Hsp92II CATG 7 cut(s) 503, 536, 732, 808, 1022, 1244, 1369
HspAI GCGC 1 cut(s) 138
KasI GGCGCC 1 cut(s) 137
KpnI GGTACC 1 cut(s) 672
Kzo9I GATC 4 cut(s) 69, 112, 160, 226
LmnI GCTCC 3 cut(s) 24, 737, 866
Lsp1109I GCAGC 2 cut(s) 1127, 1130
LweI GCATC 5 cut(s) 119, 257, 623, 679, 1378
MaeI CTAG 7 cut(s) 47, 186, 519, 860, 935, 1008, 1197
MaeIII GTNAC 4 cut(s) 121, 1003, 1027, 1235
MalI GATC 4 cut(s) 71, 114, 162, 228
MbiI CCGCTC 1 cut(s) 145
MboI GATC 4 cut(s) 69, 112, 160, 226
MflI RGATCY 1 cut(s) 226
MlsI TGGCCA 2 cut(s) 708, 957
MluCI AATT 4 cut(s) 56, 609, 1127, 1399
MluNI TGGCCA 2 cut(s) 708, 957
Mly113I GGCGCC 1 cut(s) 138
MlyI GAGTC 2 cut(s) 266, 662
MmeI TCCRAC 2 cut(s) 171, 835
Mox20I TGGCCA 2 cut(s) 708, 957
Mph1103I ATGCAT 1 cut(s) 1371
MscI TGGCCA 2 cut(s) 708, 957
MseI TTAA 2 cut(s) 701, 1398
MslI CAYNNNNRTG 2 cut(s) 687, 1023
Msp20I TGGCCA 2 cut(s) 708, 957
MspI CCGG 2 cut(s) 230, 327
MspR9I CCNGG 3 cut(s) 441, 714, 912
Mva1269I GAATGC 2 cut(s) 380, 814
MvaI CCWGG 3 cut(s) 441, 714, 912
MvnI CGCG 1 cut(s) 177
NarI GGCGCC 1 cut(s) 138
NdeI CATATG 1 cut(s) 1063
NdeII GATC 4 cut(s) 69, 112, 160, 226
NlaIII CATG 7 cut(s) 503, 536, 732, 808, 1022, 1244, 1369
NlaIV GGNNCC 5 cut(s) 139, 149, 565, 670, 868
NmeAIII GCCGAG 2 cut(s) 132, 166
NmuCI GTSAC 3 cut(s) 121, 1003, 1235
NsiI ATGCAT 1 cut(s) 1371
NspI RCATGY 2 cut(s) 503, 732
NspV TTCGAA 2 cut(s) 40, 54
PaeI GCATGC 2 cut(s) 503, 732
PceI AGGCCT 1 cut(s) 197
PctI GAATGC 2 cut(s) 380, 814
PfoI TCCNGGA 1 cut(s) 910
PkrI GCNGC 5 cut(s) 64, 67, 325, 1117, 1120
Ple19I CGATCG 1 cut(s) 115
PleI GAGTC 2 cut(s) 266, 661
PluTI GGCGCC 1 cut(s) 141
PpsI GAGTC 2 cut(s) 266, 661
Psp6I CCWGG 3 cut(s) 439, 712, 910
PspGI CCWGG 3 cut(s) 439, 712, 910
PspN4I GGNNCC 5 cut(s) 139, 149, 565, 670, 868
PspPI GGNCC 2 cut(s) 148, 407
PsuI RGATCY 1 cut(s) 226
PvuI CGATCG 1 cut(s) 115
RsaI GTAC 5 cut(s) 623, 670, 1103, 1166, 1227
RsaNI GTAC 5 cut(s) 622, 669, 1102, 1165, 1226
RseI CAYNNNNRTG 2 cut(s) 687, 1023
SalI GTCGAC 3 cut(s) 253, 269, 1298
SaqAI TTAA 2 cut(s) 701, 1398
SatI GCNGC 5 cut(s) 63, 66, 324, 1116, 1119
Sau3AI GATC 4 cut(s) 69, 112, 160, 226
Sau96I GGNCC 2 cut(s) 148, 407
SchI GAGTC 2 cut(s) 266, 662
ScrFI CCNGG 3 cut(s) 441, 714, 912
SfaNI GCATC 5 cut(s) 119, 257, 623, 679, 1378
SfcI CTRYAG 2 cut(s) 558, 1336
SfoI GGCGCC 1 cut(s) 139
SfuI TTCGAA 2 cut(s) 40, 54
SinI GGWCC 1 cut(s) 407
SmiMI CAYNNNNRTG 2 cut(s) 687, 1023
SmlI CTYRAG 2 cut(s) 164, 985
SmoI CTYRAG 2 cut(s) 164, 985
SphI GCATGC 2 cut(s) 503, 732
Sse9I AATT 4 cut(s) 56, 609, 1127, 1399
SseBI AGGCCT 1 cut(s) 197
SsiI CCGC 6 cut(s) 62, 65, 132, 145, 324, 581
SspDI GGCGCC 1 cut(s) 137
SspI AATATT 1 cut(s) 962
SspMI CTAG 7 cut(s) 47, 186, 519, 860, 935, 1008, 1197
StuI AGGCCT 1 cut(s) 197
StyD4I CCNGG 3 cut(s) 439, 712, 910
StyI CCWWGG 2 cut(s) 31, 46
TaaI ACNGT 7 cut(s) 208, 300, 407, 426, 529, 850, 1213
TaqI TCGA 8 cut(s) 40, 54, 237, 254, 270, 1185, 1217, 1299
TasI AATT 4 cut(s) 56, 609, 1127, 1399
TatI WGTACW 2 cut(s) 1101, 1225
TauI GCSGC 3 cut(s) 65, 68, 326
Tru1I TTAA 2 cut(s) 701, 1398
Tru9I TTAA 2 cut(s) 701, 1398
TscAI CASTG 3 cut(s) 431, 853, 895
TseFI GTSAC 3 cut(s) 121, 1003, 1235
TseI GCWGC 2 cut(s) 1115, 1118
Tsp45I GTSAC 3 cut(s) 121, 1003, 1235
TspDTI ATGAA 6 cut(s) 474, 521, 606, 821, 1235, 1354
TspGWI ACGGA 1 cut(s) 813
TspRI CASTG 3 cut(s) 431, 853, 895
VpaK11BI GGWCC 1 cut(s) 407
XagI CCTNNNNNAGG 2 cut(s) 558, 1336
XapI RAATTY 1 cut(s) 1127
XceI RCATGY 2 cut(s) 503, 732
XmaJI CCTAGG 1 cut(s) 46
XmiI GTMKAC 3 cut(s) 254, 270, 1299
XspI CTAG 7 cut(s) 47, 186, 519, 860, 935, 1008, 1197
Zsp2I ATGCAT 1 cut(s) 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.