Rh7BG430200

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000320
Physical Location & Seq
Reverse (-)
49241470 .. 49245252
3783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG430200.1

Sequence Viewer

Length: 1842 bp
ATGGTGCTGGATCCAAGACGTGTAAAAAGGAAAGCTACCCACCTTCTTCGATCATCATATCCAAGAAAGAACAACATGAAACCCCAGAAGAATTGTTCGATATTATTGACAGAGATTCTGGGGTTCTTTCTTATCGTGCGGTTCACCTCCCTAGTTGAAGGCGAAGTGCATTTCTATGATTTTGTTGTAAGGGAGAAAAACTTCACCAAACTGTGTTCAACAAAGAGCATCTTGGTAGTAAACGATGGTTTTCCAGGTCCAGAGATACGAGTTCACAAAGGAGATACAGTTTACGTTAATGTTCATAACCAAGGATATTATGGTTTCACTATTCACTGGCATGGGATAAAGCAACCAAGAAATCCGTGGTCAGATGGTCCAGAGTACATCACGCAGTGTCCAATAATTCCCGGAACAAATTTCACTTATGAAATCTCTTTATCCACTGAAGAAGGAACTTTATGGTGGCATGCTCATAGTGATTGGACAAGAGCCACTGTTCATGGTGCGATTGTTATCTTACCAGGTGTTGGAACCACATTTCCATTTCCTCAACCGGATGAAGATGAGACCATTATAATTGCATCCTGGTACGAGGGAGATATCAAAGAACTAGTTGATGAGGCTATGGATGATGGTAGCGACTTGCCCCATTCAGATGCTTATACAATAAATGGCGAACCAGGAGACTTTTGTCCATGCTCCAGTGAAACAACATATCATCGAATGGTTGACTACGGCAAGACCTATCTTCTTCGTATAGTCAACGCAAACATCAACGCAGAACACTTCTTTGCAGTTGCTGAACACAATCTCACCGTTGTTGGCCTAGACGGAGCCTATATAAAACCGATAGACACAACCTACATAGTCATCAGTGCTGGACAGGCGATGGATGTCCTCCTCAAAGCAAACCAATCTCCTGGCCAATACTATATAGCTGCTAGACAATACTCAAGTGAGGATCCAGAAGTGACTGGCTTTGACCATGCGAATGTTACCGCAATCCTTGAATACAGAGGCAACTACACATATCAGACATCTCCTTCCTTTCCAACTACTCTTCCCATGTACTTGGACTATGCAGCAGCAATAAAATTCACCTCCCGGATTAAAGGCTTGGCGACCCCCAAATACCCTACAGATGTCCCATTAAATGTTACTACTAAAATGTATATAACAGTTTCTATGAATTATCTTCCTTGTTCACATCCTGGCTGTGAAACAACTGAACAAATCTCTTCAAGTATGAATAATGTTAGCTGGATTAACCCAACAACAGATGTCCTTAGAGCCTACTACAGGAACATAAGTGGGGTTTACACAACGGATTTTCCAGACCAACCGCCTTCTTATTATAACTTCACAGAGGAAACTTTCGTGGATAATATTGTGTTCACTGTCCAAGGGACAAAGGTGAAGTTGTTGAATTATAACGAAACAGTTCAAATTGTGTTCCAAGGGACTAATGTGATGAAGGGCTCTGTTAATCATCCAATGCATATGCATGGATATAGCTTCTACGTGGTTGGATCTGGTTATGGAAATTATGACGATGAGGATGATCCAAAGGGGTTTAATTTTGTTGATCCTCCTAAAGTAACTACCTTTGGAGTTCCCAAAAATGGCTGGTTAGCAATCAGATTTATAGCAAATAATCCTGGGGTGTGGTTTTGGCACTGTCATTTTGATAGACACTTGAGTTGGGGTATGAACACTGCTTTCATAGTCAAAAATGGTGGTACTGCTGAGGCTAGCATCCGTCGACCCCCAGCTTACATGCCTCCATGTGAGCCTCACTTGGATTCTCGTATCAAAAACAGTTATGAGAATATTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

613

Amino Acids

69.33

Weight (kDa)

5.74

Isoelectric Point (pI)

35.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 63 - 175 4.1e-39 Multicopper oxidase
Cu-oxidase PF00394 189 - 342 1.1e-36 Multicopper oxidase
Cu-oxidase_2 PF07731 445 - 579 1.4e-39 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 578, 1359, 1434
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 1 cut(s) 1765
AciI CCGC 3 cut(s) 139, 1002, 1346
AclWI GGATC 7 cut(s) 5, 18, 959, 972, 1540, 1559, 1583
AcoI YGGCCR 1 cut(s) 925
AcsI RAATTY 2 cut(s) 418, 1097
AcuI CTGAAG 1 cut(s) 468
AdeI CACNNNGTG 1 cut(s) 396
AfaI GTAC 4 cut(s) 386, 593, 1073, 1744
AfiI CCNNNNNNNGG 3 cut(s) 530, 1302, 1625
AflIII ACRYGT 1 cut(s) 19
AgsI TTSAA 6 cut(s) 158, 219, 1013, 1245, 1429, 1448
AhlI ACTAGT 1 cut(s) 613
AjiI CACGTC 1 cut(s) 20
AjnI CCWGG 7 cut(s) 253, 523, 587, 682, 922, 1213, 1660
AloI GAACNNNNNNTCC 2 cut(s) 526, 558
AluBI AGCT 5 cut(s) 35, 941, 1263, 1518, 1775
AluI AGCT 5 cut(s) 35, 941, 1263, 1518, 1775
Alw26I GTCTC 2 cut(s) 563, 681
AlwI GGATC 7 cut(s) 5, 18, 959, 972, 1540, 1559, 1583
AlwNI CAGNNNCTG 1 cut(s) 803
AoxI GGCC 2 cut(s) 826, 925
ApeKI GCWGC 3 cut(s) 941, 1085, 1088
ApoI RAATTY 2 cut(s) 418, 1097
Asp700I GAANNNNTTC 2 cut(s) 200, 1443
AspS9I GGNCC 2 cut(s) 257, 377
AsuC2I CCSGG 2 cut(s) 411, 1108
AsuHPI GGTGA 5 cut(s) 136, 196, 808, 1093, 1429
AsuNHI GCTAGC 1 cut(s) 1754
AvaII GGWCC 2 cut(s) 257, 377
BalI TGGCCA 1 cut(s) 927
BamHI GGATCC 2 cut(s) 10, 964
BanII GRGCYC 1 cut(s) 1484
BbvCI CCTCAGC 1 cut(s) 1749
BbvI GCAGC 3 cut(s) 928, 1097, 1100
BccI CCATC 4 cut(s) 239, 368, 629, 886
BceAI ACGGC 1 cut(s) 754
BciT130I CCWGG 7 cut(s) 255, 525, 589, 684, 924, 1215, 1662
BcnI CCSGG 2 cut(s) 411, 1108
BcoDI GTCTC 2 cut(s) 563, 681
BcuI ACTAGT 1 cut(s) 613
BfaI CTAG 5 cut(s) 152, 614, 830, 945, 1755
BfmI CTRYAG 2 cut(s) 1140, 1300
BisI GCNGC 3 cut(s) 942, 1086, 1089
BlsI GCNGC 3 cut(s) 943, 1087, 1090
Bme1390I CCNGG 9 cut(s) 255, 411, 525, 589, 684, 924, 1108, 1215, 1662
Bme18I GGWCC 2 cut(s) 257, 377
BmgBI CACGTC 1 cut(s) 20
BmgT120I GGNCC 2 cut(s) 257, 377
BmiI GGNNCC 4 cut(s) 12, 535, 838, 966
BmrFI CCNGG 9 cut(s) 255, 411, 525, 589, 684, 924, 1108, 1215, 1662
BmsI GCATC 4 cut(s) 237, 593, 649, 1767
BmtI GCTAGC 1 cut(s) 1758
BoxI GACNNNNGTC 1 cut(s) 693
BpmI CTGGAG 1 cut(s) 688
Bpu10I CCTNAGC 1 cut(s) 1749
BpuEI CTTGAG 2 cut(s) 940, 1720
BpuMI CCSGG 2 cut(s) 411, 1108
BsaAI YACGTR 1 cut(s) 1525
BsaBI GATNNNNATC 1 cut(s) 515
BsaI GGTCTC 1 cut(s) 563
BsaJI CCNNGG 5 cut(s) 310, 365, 1405, 1459, 1661
BsaWI WCCGGW 1 cut(s) 556
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 3 cut(s) 530, 1302, 1625
Bse1I ACTGG 3 cut(s) 341, 705, 982
Bse8I GATNNNNATC 1 cut(s) 515
BseBI CCWGG 7 cut(s) 255, 525, 589, 684, 924, 1215, 1662
BseDI CCNNGG 5 cut(s) 310, 365, 1405, 1459, 1661
BseGI GGATG 8 cut(s) 565, 584, 637, 901, 1210, 1492, 1567, 1758
BseJI GATNNNNATC 1 cut(s) 515
BseLI CCNNNNNNNGG 3 cut(s) 530, 1302, 1625
BseMII CTCAG 1 cut(s) 1740
BseNI ACTGG 3 cut(s) 341, 705, 982
BseRI GAGGAG 1 cut(s) 893
BseXI GCAGC 3 cut(s) 928, 1097, 1100
BseYI CCCAGC 1 cut(s) 1771
BshFI GGCC 2 cut(s) 828, 927
BsiSI CCGG 3 cut(s) 411, 557, 1108
BslFI GGGAC 3 cut(s) 1133, 1423, 1477
BslI CCNNNNNNNGG 3 cut(s) 530, 1302, 1625
BsmAI GTCTC 2 cut(s) 563, 681
BsmFI GGGAC 3 cut(s) 1133, 1423, 1477
BsnI GGCC 2 cut(s) 828, 927
Bso31I GGTCTC 1 cut(s) 563
Bsp1286I GDGCHC 1 cut(s) 1484
Bsp143I GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
BspACI CCGC 3 cut(s) 139, 1002, 1346
BspANI GGCC 2 cut(s) 828, 927
BspCNI CTCAG 1 cut(s) 1741
BspLI GGNNCC 4 cut(s) 12, 535, 838, 966
BspOI GCTAGC 1 cut(s) 1758
BspPI GGATC 7 cut(s) 5, 18, 959, 972, 1540, 1559, 1583
BspTNI GGTCTC 1 cut(s) 563
BsrI ACTGG 3 cut(s) 341, 705, 982
BssECI CCNNGG 5 cut(s) 310, 365, 1405, 1459, 1661
BssMI GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
BssT1I CCWWGG 3 cut(s) 310, 1405, 1459
Bst2UI CCWGG 7 cut(s) 255, 525, 589, 684, 924, 1215, 1662
Bst4CI ACNGT 9 cut(s) 213, 289, 499, 820, 1183, 1402, 1444, 1682, 1823
Bst6I CTCTTC 2 cut(s) 1068, 1246
BstBAI YACGTR 1 cut(s) 1525
BstC8I GCNNGC 2 cut(s) 471, 1756
BstDEI CTNAG 2 cut(s) 1289, 1749
BstDSI CCRYGG 1 cut(s) 365
BstENI CCTNNNNNAGG 1 cut(s) 1300
BstF5I GGATG 8 cut(s) 565, 584, 637, 901, 1210, 1492, 1567, 1758
BstKTI GATC 6 cut(s) 13, 53, 967, 1535, 1567, 1591
BstMAI GTCTC 2 cut(s) 563, 681
BstMBI GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
BstMWI GCNNNNNNNGC 1 cut(s) 887
BstNI CCWGG 7 cut(s) 255, 525, 589, 684, 924, 1215, 1662
BstNSI RCATGY 2 cut(s) 473, 1783
BstPAI GACNNNNGTC 1 cut(s) 693
BstSCI CCNGG 9 cut(s) 253, 409, 523, 587, 682, 922, 1106, 1213, 1660
BstSFI CTRYAG 2 cut(s) 1140, 1300
BstV1I GCAGC 3 cut(s) 928, 1097, 1100
BstX2I RGATCY 3 cut(s) 10, 964, 1532
BstXI CCANNNNNNTGG 2 cut(s) 923, 1075
BstYI RGATCY 3 cut(s) 10, 964, 1532
BsuRI GGCC 2 cut(s) 828, 927
BtgI CCRYGG 1 cut(s) 365
BtgZI GCGATG 1 cut(s) 905
BtrI CACGTC 1 cut(s) 20
BtsCI GGATG 8 cut(s) 565, 584, 637, 901, 1210, 1492, 1567, 1758
BtsI GCAGTG 2 cut(s) 401, 1716
BtsIMutI CAGTG 9 cut(s) 334, 401, 444, 495, 712, 883, 1398, 1678, 1716
Cac8I GCNNGC 2 cut(s) 471, 1756
CaiI CAGNNNCTG 1 cut(s) 803
Cfr13I GGNCC 2 cut(s) 257, 377
CsiI ACCWGGT 1 cut(s) 523
Csp6I GTAC 4 cut(s) 385, 592, 1072, 1743
CspCI CAANNNNNGTGG 2 cut(s) 1720, 1755
CviQI GTAC 4 cut(s) 385, 592, 1072, 1743
DdeI CTNAG 2 cut(s) 1289, 1749
DpnI GATC 6 cut(s) 12, 52, 966, 1534, 1566, 1590
DpnII GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
DraIII CACNNNGTG 1 cut(s) 396
EaeI YGGCCR 1 cut(s) 925
Eam1104I CTCTTC 2 cut(s) 1068, 1246
EarI CTCTTC 2 cut(s) 1068, 1246
Eco130I CCWWGG 3 cut(s) 310, 1405, 1459
Eco24I GRGCYC 1 cut(s) 1484
Eco31I GGTCTC 1 cut(s) 563
Eco32I GATATC 1 cut(s) 604
Eco47I GGWCC 2 cut(s) 257, 377
Eco57I CTGAAG 1 cut(s) 468
EcoNI CCTNNNNNAGG 1 cut(s) 1300
EcoRII CCWGG 7 cut(s) 253, 523, 587, 682, 922, 1213, 1660
EcoRV GATATC 1 cut(s) 604
EcoT14I CCWWGG 3 cut(s) 310, 1405, 1459
EcoT22I ATGCAT 2 cut(s) 1503, 1509
EcoT38I GRGCYC 1 cut(s) 1484
ErhI CCWWGG 3 cut(s) 310, 1405, 1459
FalI AAGNNNNNCTT 2 cut(s) 215, 247
FaqI GGGAC 3 cut(s) 1133, 1423, 1477
FauNDI CATATG 1 cut(s) 1503
FblI GTMKAC 1 cut(s) 1765
Fnu4HI GCNGC 3 cut(s) 942, 1086, 1089
FokI GGATG 8 cut(s) 571, 572, 644, 908, 1197, 1479, 1574, 1745
FriOI GRGCYC 1 cut(s) 1484
Fsp4HI GCNGC 3 cut(s) 942, 1086, 1089
FspBI CTAG 5 cut(s) 152, 614, 830, 945, 1755
GluI GCNGC 3 cut(s) 942, 1086, 1089
GsaI CCCAGC 1 cut(s) 1775
GsuI CTGGAG 1 cut(s) 688
HaeIII GGCC 2 cut(s) 828, 927
HapII CCGG 3 cut(s) 411, 557, 1108
HincII GTYRAC 3 cut(s) 733, 766, 1766
HindII GTYRAC 3 cut(s) 733, 766, 1766
HinfI GANTC 2 cut(s) 115, 1805
HpaII CCGG 3 cut(s) 411, 557, 1108
HphI GGTGA 5 cut(s) 136, 196, 808, 1093, 1429
Hpy188I TCNGA 4 cut(s) 373, 658, 1038, 1643
Hpy188III TCNNGA 4 cut(s) 260, 380, 968, 1337
Hpy99I CGWCG 1 cut(s) 1767
HpyAV CCTTC 6 cut(s) 53, 152, 446, 1056, 1359, 1471
HpyCH4III ACNGT 9 cut(s) 213, 289, 499, 820, 1183, 1402, 1444, 1682, 1823
HpyCH4IV ACGT 3 cut(s) 19, 294, 1524
HpyCH4V TGCA 6 cut(s) 169, 584, 797, 1085, 1501, 1507
HpyF10VI GCNNNNNNNGC 1 cut(s) 887
HpyF3I CTNAG 2 cut(s) 1289, 1749
HpySE526I ACGT 3 cut(s) 19, 294, 1524
Kzo9I GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
LmnI GCTCC 2 cut(s) 707, 836
Lsp1109I GCAGC 3 cut(s) 928, 1097, 1100
LweI GCATC 4 cut(s) 237, 593, 649, 1767
MabI ACCWGGT 1 cut(s) 523
MaeI CTAG 5 cut(s) 152, 614, 830, 945, 1755
MaeII ACGT 3 cut(s) 19, 294, 1524
MaeIII GTNAC 4 cut(s) 973, 997, 1159, 1600
MalI GATC 6 cut(s) 12, 52, 966, 1534, 1566, 1590
MboI GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
MboII GAAGA 9 cut(s) 38, 100, 461, 575, 743, 746, 1055, 1190, 1233
MflI RGATCY 3 cut(s) 10, 964, 1532
MhlI GDGCHC 1 cut(s) 1484
MlsI TGGCCA 1 cut(s) 927
MluNI TGGCCA 1 cut(s) 927
MmeI TCCRAC 3 cut(s) 511, 1079, 1510
Mox20I TGGCCA 1 cut(s) 927
Mph1103I ATGCAT 2 cut(s) 1503, 1509
MroXI GAANNNNTTC 2 cut(s) 200, 1443
MscI TGGCCA 1 cut(s) 927
MseI TTAA 6 cut(s) 297, 1113, 1154, 1269, 1488, 1578
MslI CAYNNNNRTG 5 cut(s) 174, 339, 657, 993, 1506
Msp20I TGGCCA 1 cut(s) 927
MspI CCGG 3 cut(s) 411, 557, 1108
MspR9I CCNGG 9 cut(s) 255, 411, 525, 589, 684, 924, 1108, 1215, 1662
MvaI CCWGG 7 cut(s) 255, 525, 589, 684, 924, 1215, 1662
MwoI GCNNNNNNNGC 1 cut(s) 887
NciI CCSGG 2 cut(s) 411, 1108
NdeI CATATG 1 cut(s) 1503
NdeII GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
NheI GCTAGC 1 cut(s) 1754
NlaIV GGNNCC 4 cut(s) 12, 535, 838, 966
NmuCI GTSAC 1 cut(s) 973
NsiI ATGCAT 2 cut(s) 1503, 1509
NspI RCATGY 2 cut(s) 473, 1783
PaeI GCATGC 1 cut(s) 473
PdmI GAANNNNTTC 2 cut(s) 200, 1443
PfeI GAWTC 2 cut(s) 115, 1805
PflMI CCANNNNNTGG 1 cut(s) 530
PfoI TCCNGGA 2 cut(s) 409, 1106
PkrI GCNGC 3 cut(s) 943, 1087, 1090
Ppu21I YACGTR 1 cut(s) 1525
PshAI GACNNNNGTC 1 cut(s) 693
PsiI TTATAA 3 cut(s) 578, 1359, 1434
Psp6I CCWGG 7 cut(s) 253, 523, 587, 682, 922, 1213, 1660
PspFI CCCAGC 1 cut(s) 1771
PspGI CCWGG 7 cut(s) 253, 523, 587, 682, 922, 1213, 1660
PspN4I GGNNCC 4 cut(s) 12, 535, 838, 966
PspPI GGNCC 2 cut(s) 257, 377
PstNI CAGNNNCTG 1 cut(s) 803
PsuI RGATCY 3 cut(s) 10, 964, 1532
RsaI GTAC 4 cut(s) 386, 593, 1073, 1744
RsaNI GTAC 4 cut(s) 385, 592, 1072, 1743
RseI CAYNNNNRTG 5 cut(s) 174, 339, 657, 993, 1506
SalI GTCGAC 1 cut(s) 1764
SaqAI TTAA 6 cut(s) 297, 1113, 1154, 1269, 1488, 1578
SatI GCNGC 3 cut(s) 942, 1086, 1089
Sau3AI GATC 6 cut(s) 10, 50, 964, 1532, 1564, 1588
Sau96I GGNCC 2 cut(s) 257, 377
ScrFI CCNGG 9 cut(s) 255, 411, 525, 589, 684, 924, 1108, 1215, 1662
SduI GDGCHC 1 cut(s) 1484
SexAI ACCWGGT 1 cut(s) 523
SfaNI GCATC 4 cut(s) 237, 593, 649, 1767
SfcI CTRYAG 2 cut(s) 1140, 1300
SinI GGWCC 2 cut(s) 257, 377
SmiMI CAYNNNNRTG 5 cut(s) 174, 339, 657, 993, 1506
SmlI CTYRAG 2 cut(s) 955, 1699
SmoI CTYRAG 2 cut(s) 955, 1699
SpeI ACTAGT 1 cut(s) 613
SphI GCATGC 1 cut(s) 473
SsiI CCGC 3 cut(s) 139, 1002, 1346
SspI AATATT 2 cut(s) 1390, 1834
SspMI CTAG 5 cut(s) 152, 614, 830, 945, 1755
StyD4I CCNGG 9 cut(s) 253, 409, 523, 587, 682, 922, 1106, 1213, 1660
StyI CCWWGG 3 cut(s) 310, 1405, 1459
TaaI ACNGT 9 cut(s) 213, 289, 499, 820, 1183, 1402, 1444, 1682, 1823
TaiI ACGT 3 cut(s) 22, 297, 1527
TaqI TCGA 4 cut(s) 49, 98, 724, 1765
TatI WGTACW 2 cut(s) 384, 1071
TfiI GAWTC 2 cut(s) 115, 1805
Tru1I TTAA 6 cut(s) 297, 1113, 1154, 1269, 1488, 1578
Tru9I TTAA 6 cut(s) 297, 1113, 1154, 1269, 1488, 1578
TscAI CASTG 9 cut(s) 341, 401, 451, 502, 712, 883, 1405, 1685, 1723
TseFI GTSAC 1 cut(s) 973
TseI GCWGC 3 cut(s) 941, 1085, 1088
Tsp45I GTSAC 1 cut(s) 973
TspGWI ACGGA 4 cut(s) 354, 849, 1343, 1751
TspRI CASTG 9 cut(s) 341, 401, 451, 502, 712, 883, 1405, 1685, 1723
Van91I CCANNNNNTGG 1 cut(s) 530
VpaK11BI GGWCC 2 cut(s) 257, 377
XagI CCTNNNNNAGG 1 cut(s) 1300
XapI RAATTY 2 cut(s) 418, 1097
XceI RCATGY 2 cut(s) 473, 1783
XcmI CCANNNNNNNNNTGG 2 cut(s) 317, 363
XmiI GTMKAC 1 cut(s) 1765
XmnI GAANNNNTTC 2 cut(s) 200, 1443
XspI CTAG 5 cut(s) 152, 614, 830, 945, 1755
Zsp2I ATGCAT 2 cut(s) 1503, 1509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.