Rw6G024020

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000320
Physical Location & Seq
Reverse (-)
46803575 .. 46806107
2533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G024020.1

Sequence Viewer

Length: 1761 bp
ATGAAATCCCAAAAGAAAAGGACGGCTATTCTAGTTGATATCTTTCTTGTCCTGCAGTTCTTGATGATCTCTCTGTTAAGGGAGAAAAACTTCACCAGATTATGCGAAACAAAGAGCATGTTTGTTGTAAATGACATTTTCCCAGGCCCGGAGATACGAGTTCATAAAGGGGATATGGTCTATGTAAATGTTTATAATCAAGGATATTATGGTCTCACTATTCACTGGCATGGAATAATGCAACTAAGAAATCCATGGTCAGATGGTCCTGAGTATATCACACAGTGTCCAATCCAACCAGGGACTAATTTCACATACGAGGTCTTGTTATCTACGGAAGAAGGAACCGTATGGTGGCATGCTCATAGTGACTGGACACGAGCTGGCGTTCATGGGGCCATTGTCATCTTGCCTACTGTTGGAAGCACATATCCATTTCCTCAACCCGATGAAGATGAGGTCATTATATTATCATCCTGGTACTTAGGAGATTTGAAAGTACGGGTTGATGAGGCTATGAAAGAAGCCACATCTTTACCCCGTTCTGATGCATACACCATAAATGGGCAGCCGGGGGATCTTTTTCCATGCTCCAAGGGGACAGCATATCGTCGAAAAGTGGATTATGCCAAGACCTATCTTCTTCGTATAGTCAATGCAAACATAGATTCATCCCTTTTCTTTGCAGTTGCTCAACACAACCTCACAGTTGTCGGACTAGACGGAGCCTATATCAAACCCATATACACAACCTACATAGTCATAAGCCCTGGACAAACTATGGATGTTTTGCTCAAAACTGATCAGGTTCTCGGGCGCTATTACATGGCTGGTAGACATTTCTCTAGTGATAATGCCAAAGTTTCTCAATTTGGCCATGATGTTACTGCAATCTTGGAATACAATGGCAACTACACTTATCCAACATCACCTCTCTTTCCCAAAACACTTCCTATGTACTCAGACTTTGCAGCAGCATTAAACTTCACTTACCAAATTAAAAGCTTAGCTTCCCCAGAATATCCAATAAATGTCCCACCAGACAATGACATTACTACCAGAATGTTTATAACAGCTTCCATGAATTCACTTTACTGTGAAGATTCAGGCTTCTTGAGCTGCACAGAGATACCAATCGCTACAAGCGTAAATAACATTAGCTGGGTGAACCCGAGGAATACAGATCTCTTGCAAGCTTATTACAGGAACATAAGTGGGGTTTACTCAACTGATTTTCCAGACCAACCGCCTACTTATTATAACTTTACAGACGAAACTTACTCGAACGATACCGTGTTAACAGTACAAGGAACAAAGGTGAAGGTGTTAAGTTATAATGAGTCAGTTGAGATTGTGTTCCAAGGGACTGATGTGCAAGGAGGCTCTGTGAATCATCCACTGCATATGCATGGATATAAGTTTTATGTCGTTGGATATGGTTTCGGAAATTATGACAATGAGACCGACCCAAAAGGGTTTAATCTTGTTGATCCTCCTCATGTCACTACATTTGGAATTCCCAAAAATGGATGGTTGGCGATCAGATTCATAGCGAATAATCCTGGTGTTTGGTTTTGGCATTGTCATATGGAGAGACACCTGACTTTGGGTATGGAAGCTGCATTCATAGTGAAGAATGGGGACACCGCTGAAACTAGTATACTCGAACCCCCAGCTTACATGCCTTCCTGTAATGTTCCATTGGCTTCTCGTTTCAAAAATTCTGATGTGTTTGTTGAAAAGAAAATAGATCTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

586

Amino Acids

66.2

Weight (kDa)

5.58

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 28 - 138 9.1e-38 Multicopper oxidase
Cu-oxidase PF00394 152 - 304 7.4e-32 Multicopper oxidase
Cu-oxidase_2 PF07731 411 - 547 1.4e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 195, 1070, 1260, 1335
AccI GTMKAC 2 cut(s) 835, 1660
AciI CCGC 2 cut(s) 1247, 1647
AclWI GGATC 2 cut(s) 585, 1484
AcoI YGGCCR 1 cut(s) 874
AcsI RAATTY 3 cut(s) 1084, 1515, 1720
AdeI CACNNNGTG 1 cut(s) 285
AfaI GTAC 4 cut(s) 482, 501, 959, 1305
AfiI CCNNNNNNNGG 6 cut(s) 148, 354, 419, 564, 1526, 1606
AgsI TTSAA 3 cut(s) 496, 1717, 1739
AhlI ACTAGT 1 cut(s) 1655
AjnI CCWGG 5 cut(s) 142, 298, 476, 769, 1561
AluBI AGCT 9 cut(s) 383, 1005, 1010, 1076, 1119, 1161, 1196, 1619, 1676
AluI AGCT 9 cut(s) 383, 1005, 1010, 1076, 1119, 1161, 1196, 1619, 1676
Alw26I GTCTC 3 cut(s) 218, 1454, 1588
AlwI GGATC 2 cut(s) 585, 1484
Ama87I CYCGRG 2 cut(s) 812, 1171
AoxI GGCC 3 cut(s) 145, 396, 874
ApeKI GCWGC 5 cut(s) 568, 971, 974, 1119, 1619
ApoI RAATTY 3 cut(s) 1084, 1515, 1720
Asp700I GAANNNNTTC 1 cut(s) 89
AspLEI GCGC 1 cut(s) 819
AspS9I GGNCC 3 cut(s) 146, 266, 396
AsuC2I CCSGG 2 cut(s) 149, 573
AsuHPI GGTGA 4 cut(s) 85, 921, 1177, 1330
AvaI CYCGRG 2 cut(s) 812, 1171
AvaII GGWCC 1 cut(s) 266
BalI TGGCCA 1 cut(s) 876
BauI CACGAG 1 cut(s) 378
BbvI GCAGC 5 cut(s) 580, 983, 986, 1106, 1606
BccI CCATC 2 cut(s) 257, 1524
BceAI ACGGC 1 cut(s) 39
BciT130I CCWGG 5 cut(s) 144, 300, 478, 771, 1563
BclI TGATCA 1 cut(s) 802
BcnI CCSGG 2 cut(s) 149, 573
BcoDI GTCTC 3 cut(s) 218, 1454, 1588
BcuI ACTAGT 1 cut(s) 1655
BfaI CTAG 4 cut(s) 32, 719, 846, 1656
BfmI CTRYAG 1 cut(s) 53
BfoI RGCGCY 1 cut(s) 820
BglII AGATCT 2 cut(s) 1183, 1750
BisI GCNGC 5 cut(s) 569, 972, 975, 1120, 1620
BlpI GCTNAGC 1 cut(s) 1006
BlsI GCNGC 5 cut(s) 570, 973, 976, 1121, 1621
Bme1390I CCNGG 7 cut(s) 144, 149, 300, 478, 573, 771, 1563
Bme18I GGWCC 1 cut(s) 266
BmeT110I CYCGRG 2 cut(s) 812, 1171
BmgT120I GGNCC 3 cut(s) 146, 266, 396
BmiI GGNNCC 3 cut(s) 346, 397, 727
BmrFI CCNGG 7 cut(s) 144, 149, 300, 478, 573, 771, 1563
BmsI GCATC 1 cut(s) 538
Bpu1102I GCTNAGC 1 cut(s) 1006
BpuEI CTTGAG 1 cut(s) 1135
BpuMI CCSGG 2 cut(s) 149, 573
BsaBI GATNNNNATC 1 cut(s) 1133
BsaI GGTCTC 2 cut(s) 218, 1454
BsaJI CCNNGG 8 cut(s) 142, 254, 299, 572, 594, 769, 1172, 1360
BsaXI ACNNNNNCTCC 2 cut(s) 1371, 1401
Bsc4I CCNNNNNNNGG 6 cut(s) 148, 354, 419, 564, 1526, 1606
Bse1I ACTGG 2 cut(s) 230, 377
Bse8I GATNNNNATC 1 cut(s) 1133
BseBI CCWGG 5 cut(s) 144, 300, 478, 771, 1563
BseDI CCNNGG 8 cut(s) 142, 254, 299, 572, 594, 769, 1172, 1360
BseGI GGATG 5 cut(s) 473, 671, 790, 1393, 1535
BseJI GATNNNNATC 1 cut(s) 1133
BseLI CCNNNNNNNGG 6 cut(s) 148, 354, 419, 564, 1526, 1606
BseMII CTCAG 2 cut(s) 261, 975
BseNI ACTGG 2 cut(s) 230, 377
BseRI GAGGAG 1 cut(s) 1485
BseXI GCAGC 5 cut(s) 580, 983, 986, 1106, 1606
BseYI CCCAGC 2 cut(s) 1161, 1672
BsgI GTGCAG 1 cut(s) 1105
BshFI GGCC 3 cut(s) 147, 398, 876
BsiHKCI CYCGRG 2 cut(s) 812, 1171
BsiSI CCGG 2 cut(s) 149, 572
BslFI GGGAC 5 cut(s) 316, 613, 1019, 1378, 1655
BslI CCNNNNNNNGG 6 cut(s) 148, 354, 419, 564, 1526, 1606
BsmAI GTCTC 3 cut(s) 218, 1454, 1588
BsmFI GGGAC 5 cut(s) 316, 613, 1019, 1378, 1655
BsmI GAATGC 1 cut(s) 1622
BsnI GGCC 3 cut(s) 147, 398, 876
Bso31I GGTCTC 2 cut(s) 218, 1454
BsoBI CYCGRG 2 cut(s) 812, 1171
Bsp143I GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
Bsp1720I GCTNAGC 1 cut(s) 1006
Bsp19I CCATGG 1 cut(s) 254
BspACI CCGC 2 cut(s) 1247, 1647
BspANI GGCC 3 cut(s) 147, 398, 876
BspCNI CTCAG 2 cut(s) 262, 974
BspLI GGNNCC 3 cut(s) 346, 397, 727
BspMAI CTGCAG 1 cut(s) 57
BspPI GGATC 2 cut(s) 585, 1484
BspTNI GGTCTC 2 cut(s) 218, 1454
BsrI ACTGG 2 cut(s) 230, 377
BssECI CCNNGG 8 cut(s) 142, 254, 299, 572, 594, 769, 1172, 1360
BssMI GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
BssNAI GTATAC 1 cut(s) 1661
BssSI CACGAG 1 cut(s) 378
BssT1I CCWWGG 3 cut(s) 254, 594, 1360
Bst1107I GTATAC 1 cut(s) 1661
Bst2BI CACGAG 1 cut(s) 378
Bst2UI CCWGG 5 cut(s) 144, 300, 478, 771, 1563
Bst4CI ACNGT 7 cut(s) 285, 349, 418, 709, 1097, 1294, 1303
BstC8I GCNNGC 3 cut(s) 360, 385, 1194
BstDEI CTNAG 5 cut(s) 245, 270, 484, 961, 1006
BstDSI CCRYGG 1 cut(s) 254
BstF5I GGATG 5 cut(s) 473, 671, 790, 1393, 1535
BstH2I RGCGCY 1 cut(s) 820
BstHHI GCGC 1 cut(s) 819
BstKTI GATC 7 cut(s) 69, 580, 805, 1186, 1492, 1542, 1753
BstMAI GTCTC 3 cut(s) 218, 1454, 1588
BstMBI GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
BstMWI GCNNNNNNNGC 1 cut(s) 1116
BstNI CCWGG 5 cut(s) 144, 300, 478, 771, 1563
BstNSI RCATGY 3 cut(s) 121, 362, 1684
BstSCI CCNGG 7 cut(s) 142, 147, 298, 476, 571, 769, 1561
BstSFI CTRYAG 1 cut(s) 53
BstV1I GCAGC 5 cut(s) 580, 983, 986, 1106, 1606
BstX2I RGATCY 3 cut(s) 577, 1183, 1750
BstYI RGATCY 3 cut(s) 577, 1183, 1750
BstZ17I GTATAC 1 cut(s) 1661
BsuRI GGCC 3 cut(s) 147, 398, 876
BtgI CCRYGG 1 cut(s) 254
BtsCI GGATG 5 cut(s) 473, 671, 790, 1393, 1535
BtsI GCAGTG 1 cut(s) 1397
BtsIMutI CAGTG 3 cut(s) 223, 290, 1397
Cac8I GCNNGC 3 cut(s) 360, 385, 1194
CfoI GCGC 1 cut(s) 819
Cfr13I GGNCC 3 cut(s) 146, 266, 396
Csp6I GTAC 4 cut(s) 481, 500, 958, 1304
CviQI GTAC 4 cut(s) 481, 500, 958, 1304
DdeI CTNAG 5 cut(s) 245, 270, 484, 961, 1006
DpnI GATC 7 cut(s) 68, 579, 804, 1185, 1491, 1541, 1752
DpnII GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
DraIII CACNNNGTG 1 cut(s) 285
EaeI YGGCCR 1 cut(s) 874
Eco130I CCWWGG 3 cut(s) 254, 594, 1360
Eco31I GGTCTC 2 cut(s) 218, 1454
Eco32I GATATC 1 cut(s) 40
Eco47I GGWCC 1 cut(s) 266
Eco88I CYCGRG 2 cut(s) 812, 1171
EcoRI GAATTC 2 cut(s) 1084, 1515
EcoRII CCWGG 5 cut(s) 142, 298, 476, 769, 1561
EcoRV GATATC 1 cut(s) 40
EcoT14I CCWWGG 3 cut(s) 254, 594, 1360
EcoT22I ATGCAT 2 cut(s) 553, 1410
ErhI CCWWGG 3 cut(s) 254, 594, 1360
FalI AAGNNNNNCTT 2 cut(s) 994, 1026
FaqI GGGAC 5 cut(s) 316, 613, 1019, 1378, 1655
FauNDI CATATG 2 cut(s) 1404, 1587
FbaI TGATCA 1 cut(s) 802
FblI GTMKAC 2 cut(s) 835, 1660
Fnu4HI GCNGC 5 cut(s) 569, 972, 975, 1120, 1620
FokI GGATG 5 cut(s) 460, 658, 797, 1380, 1542
Fsp4HI GCNGC 5 cut(s) 569, 972, 975, 1120, 1620
FspBI CTAG 4 cut(s) 32, 719, 846, 1656
GlaI GCGC 1 cut(s) 818
GluI GCNGC 5 cut(s) 569, 972, 975, 1120, 1620
GsaI CCCAGC 2 cut(s) 1165, 1676
HaeII RGCGCY 1 cut(s) 820
HaeIII GGCC 3 cut(s) 147, 398, 876
HapII CCGG 2 cut(s) 149, 572
HhaI GCGC 1 cut(s) 819
Hin6I GCGC 1 cut(s) 817
HinP1I GCGC 1 cut(s) 817
HincII GTYRAC 1 cut(s) 1299
HindII GTYRAC 1 cut(s) 1299
HindIII AAGCTT 2 cut(s) 1003, 1194
HinfI GANTC 5 cut(s) 668, 1103, 1340, 1390, 1545
HpaI GTTAAC 1 cut(s) 1299
HpaII CCGG 2 cut(s) 149, 572
HphI GGTGA 4 cut(s) 85, 921, 1177, 1330
Hpy166II GTNNAC 5 cut(s) 836, 1168, 1222, 1299, 1661
Hpy188I TCNGA 8 cut(s) 262, 547, 716, 964, 1445, 1544, 1726, 1760
Hpy188III TCNNGA 4 cut(s) 61, 269, 1114, 1238
Hpy8I GTNNAC 5 cut(s) 836, 1168, 1222, 1299, 1661
Hpy99I CGWCG 1 cut(s) 615
HpyAV CCTTC 3 cut(s) 335, 1315, 1695
HpyCH4III ACNGT 7 cut(s) 285, 349, 418, 709, 1097, 1294, 1303
HpyF10VI GCNNNNNNNGC 1 cut(s) 1116
HpyF3I CTNAG 5 cut(s) 245, 270, 484, 961, 1006
HspAI GCGC 1 cut(s) 817
Ksp22I TGATCA 1 cut(s) 802
KspAI GTTAAC 1 cut(s) 1299
Kzo9I GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
LmnI GCTCC 2 cut(s) 596, 725
Lsp1109I GCAGC 5 cut(s) 580, 983, 986, 1106, 1606
LweI GCATC 1 cut(s) 538
MaeI CTAG 4 cut(s) 32, 719, 846, 1656
MaeIII GTNAC 3 cut(s) 368, 883, 1501
MalI GATC 7 cut(s) 68, 579, 804, 1185, 1491, 1541, 1752
MboI GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
MboII GAAGA 6 cut(s) 350, 464, 632, 635, 1112, 1645
MflI RGATCY 3 cut(s) 577, 1183, 1750
MlsI TGGCCA 1 cut(s) 876
MluCI AATT 7 cut(s) 307, 869, 996, 1084, 1447, 1515, 1720
MluNI TGGCCA 1 cut(s) 876
MlyI GAGTC 1 cut(s) 1349
MmeI TCCRAC 5 cut(s) 319, 400, 694, 947, 1411
Mox20I TGGCCA 1 cut(s) 876
Mph1103I ATGCAT 2 cut(s) 553, 1410
MroXI GAANNNNTTC 1 cut(s) 89
MscI TGGCCA 1 cut(s) 876
MseI TTAA 6 cut(s) 77, 980, 999, 1298, 1328, 1479
MslI CAYNNNNRTG 2 cut(s) 228, 1407
Msp20I TGGCCA 1 cut(s) 876
MspA1I CMGCKG 1 cut(s) 1649
MspI CCGG 2 cut(s) 149, 572
MspR9I CCNGG 7 cut(s) 144, 149, 300, 478, 573, 771, 1563
Mva1269I GAATGC 1 cut(s) 1622
MvaI CCWGG 5 cut(s) 144, 300, 478, 771, 1563
MwoI GCNNNNNNNGC 1 cut(s) 1116
NciI CCSGG 2 cut(s) 149, 573
NcoI CCATGG 1 cut(s) 254
NdeI CATATG 2 cut(s) 1404, 1587
NdeII GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
NlaIV GGNNCC 3 cut(s) 346, 397, 727
NmuCI GTSAC 2 cut(s) 368, 1501
NsiI ATGCAT 2 cut(s) 553, 1410
NspI RCATGY 3 cut(s) 121, 362, 1684
PaeI GCATGC 1 cut(s) 362
PcsI WCGNNNNNNNCGW 1 cut(s) 1143
PctI GAATGC 1 cut(s) 1622
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 4 cut(s) 668, 1103, 1390, 1545
PkrI GCNGC 5 cut(s) 570, 973, 976, 1121, 1621
PleI GAGTC 1 cut(s) 1348
PpsI GAGTC 1 cut(s) 1348
PsiI TTATAA 4 cut(s) 195, 1070, 1260, 1335
Psp6I CCWGG 5 cut(s) 142, 298, 476, 769, 1561
PspFI CCCAGC 2 cut(s) 1161, 1672
PspGI CCWGG 5 cut(s) 142, 298, 476, 769, 1561
PspN4I GGNNCC 3 cut(s) 346, 397, 727
PspPI GGNCC 3 cut(s) 146, 266, 396
PstI CTGCAG 1 cut(s) 57
PsuI RGATCY 3 cut(s) 577, 1183, 1750
RsaI GTAC 4 cut(s) 482, 501, 959, 1305
RsaNI GTAC 4 cut(s) 481, 500, 958, 1304
RseI CAYNNNNRTG 2 cut(s) 228, 1407
SaqAI TTAA 6 cut(s) 77, 980, 999, 1298, 1328, 1479
SatI GCNGC 5 cut(s) 569, 972, 975, 1120, 1620
Sau3AI GATC 7 cut(s) 66, 577, 802, 1183, 1489, 1539, 1750
Sau96I GGNCC 3 cut(s) 146, 266, 396
SchI GAGTC 1 cut(s) 1349
ScrFI CCNGG 7 cut(s) 144, 149, 300, 478, 573, 771, 1563
SfaNI GCATC 1 cut(s) 538
SfcI CTRYAG 1 cut(s) 53
SinI GGWCC 1 cut(s) 266
SmiMI CAYNNNNRTG 2 cut(s) 228, 1407
SmlI CTYRAG 1 cut(s) 1114
SmoI CTYRAG 1 cut(s) 1114
SpeI ACTAGT 1 cut(s) 1655
SphI GCATGC 1 cut(s) 362
Sse9I AATT 7 cut(s) 307, 869, 996, 1084, 1447, 1515, 1720
SsiI CCGC 2 cut(s) 1247, 1647
SspMI CTAG 4 cut(s) 32, 719, 846, 1656
StyD4I CCNGG 7 cut(s) 142, 147, 298, 476, 571, 769, 1561
StyI CCWWGG 3 cut(s) 254, 594, 1360
TaaI ACNGT 7 cut(s) 285, 349, 418, 709, 1097, 1294, 1303
TaqI TCGA 3 cut(s) 613, 1283, 1665
TaqII GACCGA 1 cut(s) 1478
TasI AATT 7 cut(s) 307, 869, 996, 1084, 1447, 1515, 1720
TatI WGTACW 2 cut(s) 957, 1303
TfiI GAWTC 4 cut(s) 668, 1103, 1390, 1545
Tru1I TTAA 6 cut(s) 77, 980, 999, 1298, 1328, 1479
Tru9I TTAA 6 cut(s) 77, 980, 999, 1298, 1328, 1479
TscAI CASTG 3 cut(s) 230, 290, 1404
TseFI GTSAC 2 cut(s) 368, 1501
TseI GCWGC 5 cut(s) 568, 971, 974, 1119, 1619
Tsp45I GTSAC 2 cut(s) 368, 1501
TspDTI ATGAA 9 cut(s) 17, 152, 380, 465, 533, 660, 1097, 1537, 1615
TspGWI ACGGA 2 cut(s) 350, 738
TspRI CASTG 3 cut(s) 230, 290, 1404
VpaK11BI GGWCC 1 cut(s) 266
XapI RAATTY 3 cut(s) 1084, 1515, 1720
XceI RCATGY 3 cut(s) 121, 362, 1684
XmiI GTMKAC 2 cut(s) 835, 1660
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 4 cut(s) 32, 719, 846, 1656
Zsp2I ATGCAT 2 cut(s) 553, 1410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.