Rmu_sc0002231.1_g000016

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002231.1
OG0000320
Physical Location & Seq
Reverse (-)
76064 .. 82902
6839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002231.1_g000016.1.cds

Sequence Viewer

Length: 1764 bp
atgaagcaccaaaagacatgcccattgtcaactactgagcttctggtgtttctgtttcttatggtgcagttcctctccctgctggttcaagccgaagtccagtactatgattttgttgtaagggagaaaaattacacgaggctgtgtgagacaaagagcattttagttgtgaatgatagtttcccaggaccggagatacgagttcacaaaggtgatacagtttatgtcaacgtgcataaccaaggagattacgcactcaccattcactggcatggaataaagcaaccacgaaatccctggtcagatggtccatcttacatcacacaatgtcctattccacctggaacaaacttcacctatgaagtattattgtccatagaagaaggaactgtatggtggcatgcacatagtgattggactagagctactgttcatggtgcttttgttatcttgcctgctattggaaccacattcccatttccccaacctgatgaagacgaagttcttgtaattgaacttatcgatgagtctatacaaaatggtaccgacttaccccattcagatgcttacactttaaatgggcagccaggagatttttgtgcatgctcctatggaacagcgtaccgtcgtatagtggattacggcaagacatatcttcttcgtatagtcaacggaaacatgaatgcagaacacttctttgccgttgcagagcatagtctcactgtggttggactagatggagcctacattaaacccgtaaacactgcttacatagtcataagtcctggacaaacgatggatgtcttgctagtagcaaaccagtctcttggccaatattatatggctattagacaatactcaagtgagaacccttcaaccgttaactttgaccatgcaaatgttactgcaatcctagaatacagaggcgactatacatacgagacatctcctgcatttccatctactcttcctatgtacttggacaaagcagcagcactcaaattcacataccaacttagaagcttggctactccagagtaccctgtaaatgttccactcgacatcactactagaatgtatattacagtgtcgatgaatgtacttccttgtgaccatgcaagctgtgaagtaactgagaatatcgcttcaagcctaaataatgttagttgggtcgacacaaaaccaactacaaatgtcttggaagcctactacaggaacataagcggggcttatgaatcaaatttcccagaccagccgactttgttttataattttacagcagattctatccccgactattatgattacacagcacaagggacaaaggtgaaagtgttgaactacaatgaatcggttgaaattgtgttccaagggactaatgtgatggacggttctgtcaatcatccaatgcatatgcatggatatagcttttatgtggttggatatggttttggaaattttgacaatgagactgatcccaaggggtataatttggtagatcctcctgaagtaactacctttggagttcccaaaagaggatggttagcaatcagattcaaagcaactaatcctggagtgtggttttggcattgtcatttcgagagacacttaacttggggtatgaacactgcttttatagtgaaaaatgggggcgctccagagactagcattcgcgggccaccaacttacatgcccccatgtattattccattgaattctcgtgtccacagctatggtgaatttattgaagagaaaatagagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

587

Amino Acids

66.25

Weight (kDa)

5.16

Isoelectric Point (pI)

34.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1269
AasI GACNNNNNNGTC 1 cut(s) 1394
Acc65I GGTACC 1 cut(s) 542
AccB1I GGYRCC 1 cut(s) 542
AccB7I CCANNNNNTGG 1 cut(s) 267
AccI GTMKAC 1 cut(s) 1173
AccII CGCG 1 cut(s) 1674
AciI CCGC 2 cut(s) 1224, 1674
AclWI GGATC 2 cut(s) 1469, 1493
AcoI YGGCCR 1 cut(s) 829
AcsI RAATTY 5 cut(s) 1001, 1240, 1456, 1714, 1739
AcuI CTGAAG 1 cut(s) 1527
AdeI CACNNNGTG 1 cut(s) 410
AfaI GTAC 6 cut(s) 104, 544, 623, 977, 1040, 1101
AfiI CCNNNNNNNGG 5 cut(s) 190, 267, 461, 1212, 1535
AgsI TTSAA 9 cut(s) 89, 515, 876, 1149, 1339, 1358, 1558, 1714, 1748
AjnI CCWGG 6 cut(s) 184, 296, 340, 586, 784, 1570
AleI CACNNNNGTG 1 cut(s) 210
AluBI AGCT 6 cut(s) 40, 425, 1023, 1122, 1428, 1731
AluI AGCT 6 cut(s) 40, 425, 1023, 1122, 1428, 1731
Alw26I GTCTC 7 cut(s) 143, 722, 828, 935, 1463, 1597, 1655
AlwI GGATC 2 cut(s) 1469, 1493
AoxI GGCC 2 cut(s) 829, 1676
ApeKI GCWGC 3 cut(s) 583, 989, 992
ApoI RAATTY 5 cut(s) 1001, 1240, 1456, 1714, 1739
Asp718I GGTACC 1 cut(s) 542
AspLEI GCGC 1 cut(s) 1655
AspS9I GGNCC 3 cut(s) 188, 308, 1676
AsuHPI GGTGA 5 cut(s) 224, 250, 346, 1339, 1748
AvaII GGWCC 2 cut(s) 188, 308
BalI TGGCCA 1 cut(s) 831
BanI GGYRCC 1 cut(s) 542
BarI GAAGNNNNNNTAC 2 cut(s) 1012, 1044
BauI CACGAG 2 cut(s) 136, 1719
BbsI GAAGAC 1 cut(s) 501
BbvI GCAGC 3 cut(s) 595, 1001, 1004
BccI CCATC 7 cut(s) 299, 319, 731, 790, 967, 1378, 1533
BceAI ACGGC 2 cut(s) 658, 686
BciT130I CCWGG 6 cut(s) 186, 298, 342, 588, 786, 1572
BcoDI GTCTC 7 cut(s) 143, 722, 828, 935, 1463, 1597, 1655
BfaI CTAG 6 cut(s) 420, 734, 809, 914, 1071, 1665
BfmI CTRYAG 1 cut(s) 1210
BfoI RGCGCY 1 cut(s) 1656
BisI GCNGC 3 cut(s) 584, 990, 993
BlsI GCNGC 3 cut(s) 585, 991, 994
BmcAI AGTACT 1 cut(s) 104
Bme1390I CCNGG 6 cut(s) 186, 298, 342, 588, 786, 1572
Bme18I GGWCC 2 cut(s) 188, 308
BmgT120I GGNCC 3 cut(s) 188, 308, 1676
BmiI GGNNCC 3 cut(s) 466, 544, 742
BmrFI CCNGG 6 cut(s) 186, 298, 342, 588, 786, 1572
BmsI GCATC 1 cut(s) 553
BpiI GAAGAC 1 cut(s) 501
BpmI CTGGAG 3 cut(s) 1017, 1593, 1641
BpuEI CTTGAG 1 cut(s) 844
Bsa29I ATCGAT 1 cut(s) 522
BsaJI CCNNGG 5 cut(s) 184, 241, 296, 1369, 1479
BsaWI WCCGGW 1 cut(s) 190
Bsc4I CCNNNNNNNGG 5 cut(s) 190, 267, 461, 1212, 1535
Bse1I ACTGG 3 cut(s) 100, 272, 820
BseBI CCWGG 6 cut(s) 186, 298, 342, 588, 786, 1572
BseCI ATCGAT 1 cut(s) 522
BseDI CCNNGG 5 cut(s) 184, 241, 296, 1369, 1479
BseGI GGATG 3 cut(s) 805, 1402, 1544
BseLI CCNNNNNNNGG 5 cut(s) 190, 267, 461, 1212, 1535
BseMII CTCAG 2 cut(s) 27, 1125
BseNI ACTGG 3 cut(s) 100, 272, 820
BseXI GCAGC 3 cut(s) 595, 1001, 1004
BsgI GTGCAG 1 cut(s) 86
Bsh1236I CGCG 1 cut(s) 1674
BshFI GGCC 2 cut(s) 831, 1678
BshNI GGYRCC 1 cut(s) 542
BshVI ATCGAT 1 cut(s) 522
BsiSI CCGG 1 cut(s) 191
BslFI GGGAC 2 cut(s) 1333, 1387
BslI CCNNNNNNNGG 5 cut(s) 190, 267, 461, 1212, 1535
BsmAI GTCTC 7 cut(s) 143, 722, 828, 935, 1463, 1597, 1655
BsmFI GGGAC 2 cut(s) 1333, 1387
BsmI GAATGC 2 cut(s) 688, 1668
BsnI GGCC 2 cut(s) 831, 1678
Bsp143I GATC 2 cut(s) 1474, 1498
BspACI CCGC 2 cut(s) 1224, 1674
BspANI GGCC 2 cut(s) 831, 1678
BspCNI CTCAG 2 cut(s) 28, 1126
BspDI ATCGAT 1 cut(s) 522
BspFNI CGCG 1 cut(s) 1674
BspLI GGNNCC 3 cut(s) 466, 544, 742
BspPI GGATC 2 cut(s) 1469, 1493
BspT107I GGYRCC 1 cut(s) 542
BsrI ACTGG 3 cut(s) 100, 272, 820
BssECI CCNNGG 5 cut(s) 184, 241, 296, 1369, 1479
BssMI GATC 2 cut(s) 1474, 1498
BssSI CACGAG 2 cut(s) 136, 1719
BssT1I CCWWGG 3 cut(s) 241, 1369, 1479
Bst2BI CACGAG 2 cut(s) 136, 1719
Bst2UI CCWGG 6 cut(s) 186, 298, 342, 588, 786, 1572
Bst4CI ACNGT 8 cut(s) 220, 391, 430, 626, 724, 880, 1087, 1391
Bst6I CTCTTC 2 cut(s) 972, 1743
BstC8I GCNNGC 5 cut(s) 402, 456, 604, 1120, 1676
BstDEI CTNAG 3 cut(s) 36, 1016, 1134
BstENI CCTNNNNNAGG 1 cut(s) 1210
BstF5I GGATG 3 cut(s) 805, 1402, 1544
BstFNI CGCG 1 cut(s) 1674
BstH2I RGCGCY 1 cut(s) 1656
BstHHI GCGC 1 cut(s) 1655
BstKTI GATC 2 cut(s) 1477, 1501
BstMAI GTCTC 7 cut(s) 143, 722, 828, 935, 1463, 1597, 1655
BstMBI GATC 2 cut(s) 1474, 1498
BstNI CCWGG 6 cut(s) 186, 298, 342, 588, 786, 1572
BstNSI RCATGY 4 cut(s) 21, 404, 606, 1693
BstSCI CCNGG 6 cut(s) 184, 296, 340, 586, 784, 1570
BstSFI CTRYAG 1 cut(s) 1210
BstUI CGCG 1 cut(s) 1674
BstV1I GCAGC 3 cut(s) 595, 1001, 1004
BstV2I GAAGAC 1 cut(s) 501
BstX2I RGATCY 1 cut(s) 1498
BstXI CCANNNNNNTGG 2 cut(s) 827, 1733
BstYI RGATCY 1 cut(s) 1498
Bsu15I ATCGAT 1 cut(s) 522
BsuRI GGCC 2 cut(s) 831, 1678
BsuTUI ATCGAT 1 cut(s) 522
BtsCI GGATG 3 cut(s) 805, 1402, 1544
BtsI GCAGTG 2 cut(s) 762, 1626
BtsIMutI CAGTG 5 cut(s) 265, 720, 762, 1092, 1626
Cac8I GCNNGC 5 cut(s) 402, 456, 604, 1120, 1676
CfoI GCGC 1 cut(s) 1655
Cfr13I GGNCC 3 cut(s) 188, 308, 1676
ClaI ATCGAT 1 cut(s) 522
Csp6I GTAC 6 cut(s) 103, 543, 622, 976, 1039, 1100
CviQI GTAC 6 cut(s) 103, 543, 622, 976, 1039, 1100
DdeI CTNAG 3 cut(s) 36, 1016, 1134
DpnI GATC 2 cut(s) 1476, 1500
DpnII GATC 2 cut(s) 1474, 1498
DraI TTTAAA 1 cut(s) 576
DraIII CACNNNGTG 1 cut(s) 410
DrdI GACNNNNNNGTC 1 cut(s) 1394
DseDI GACNNNNNNGTC 1 cut(s) 1394
EaeI YGGCCR 1 cut(s) 829
Eam1104I CTCTTC 2 cut(s) 972, 1743
EarI CTCTTC 2 cut(s) 972, 1743
Eco130I CCWWGG 3 cut(s) 241, 1369, 1479
Eco47I GGWCC 2 cut(s) 188, 308
Eco57I CTGAAG 1 cut(s) 1527
EcoNI CCTNNNNNAGG 1 cut(s) 1210
EcoRI GAATTC 1 cut(s) 1714
EcoRII CCWGG 6 cut(s) 184, 296, 340, 586, 784, 1570
EcoT14I CCWWGG 3 cut(s) 241, 1369, 1479
EcoT22I ATGCAT 2 cut(s) 1413, 1419
ErhI CCWWGG 3 cut(s) 241, 1369, 1479
FalI AAGNNNNNCTT 2 cut(s) 1213, 1245
FaqI GGGAC 2 cut(s) 1333, 1387
FauI CCCGC 2 cut(s) 1217, 1667
FauNDI CATATG 1 cut(s) 1413
FblI GTMKAC 1 cut(s) 1173
Fnu4HI GCNGC 3 cut(s) 584, 990, 993
FokI GGATG 3 cut(s) 812, 1389, 1551
Fsp4HI GCNGC 3 cut(s) 584, 990, 993
FspBI CTAG 6 cut(s) 420, 734, 809, 914, 1071, 1665
GlaI GCGC 1 cut(s) 1654
GluI GCNGC 3 cut(s) 584, 990, 993
GsuI CTGGAG 3 cut(s) 1017, 1593, 1641
HaeII RGCGCY 1 cut(s) 1656
HaeIII GGCC 2 cut(s) 831, 1678
HapII CCGG 1 cut(s) 191
HhaI GCGC 1 cut(s) 1655
Hin6I GCGC 1 cut(s) 1653
HinP1I GCGC 1 cut(s) 1653
HincII GTYRAC 5 cut(s) 30, 229, 670, 883, 1174
HindII GTYRAC 5 cut(s) 30, 229, 670, 883, 1174
HindIII AAGCTT 1 cut(s) 1021
HinfI GANTC 5 cut(s) 527, 1235, 1283, 1349, 1554
HpaI GTTAAC 1 cut(s) 883
HpaII CCGG 1 cut(s) 191
HphI GGTGA 5 cut(s) 224, 250, 346, 1339, 1748
Hpy166II GTNNAC 8 cut(s) 30, 205, 229, 670, 760, 883, 1174, 1726
Hpy188I TCNGA 3 cut(s) 304, 562, 1553
Hpy188III TCNNGA 4 cut(s) 1034, 1505, 1600, 1658
Hpy8I GTNNAC 8 cut(s) 30, 205, 229, 670, 760, 883, 1174, 1726
Hpy99I CGWCG 1 cut(s) 630
HpyAV CCTTC 2 cut(s) 377, 882
HpyCH4III ACNGT 8 cut(s) 220, 391, 430, 626, 724, 880, 1087, 1391
HpyCH4IV ACGT 1 cut(s) 231
HpyF3I CTNAG 3 cut(s) 36, 1016, 1134
HpySE526I ACGT 1 cut(s) 231
HspAI GCGC 1 cut(s) 1653
KpnI GGTACC 1 cut(s) 546
KspAI GTTAAC 1 cut(s) 883
Kzo9I GATC 2 cut(s) 1474, 1498
LmnI GCTCC 3 cut(s) 611, 740, 1660
Lsp1109I GCAGC 3 cut(s) 595, 1001, 1004
LweI GCATC 1 cut(s) 553
MaeI CTAG 6 cut(s) 420, 734, 809, 914, 1071, 1665
MaeII ACGT 1 cut(s) 231
MaeIII GTNAC 4 cut(s) 901, 1109, 1129, 1510
MalI GATC 2 cut(s) 1476, 1500
MboI GATC 2 cut(s) 1474, 1498
MboII GAAGA 6 cut(s) 392, 506, 647, 650, 959, 1760
MflI RGATCY 1 cut(s) 1498
MlsI TGGCCA 1 cut(s) 831
MluNI TGGCCA 1 cut(s) 831
MlyI GAGTC 1 cut(s) 536
MmeI TCCRAC 2 cut(s) 709, 1420
MnlI CCTC 5 cut(s) 83, 132, 917, 1512, 1529
Mox20I TGGCCA 1 cut(s) 831
Mph1103I ATGCAT 2 cut(s) 1413, 1419
MscI TGGCCA 1 cut(s) 831
MseI TTAA 4 cut(s) 575, 750, 882, 1610
MslI CAYNNNNRTG 6 cut(s) 210, 270, 561, 897, 1416, 1731
Msp20I TGGCCA 1 cut(s) 831
MspI CCGG 1 cut(s) 191
MspR9I CCNGG 6 cut(s) 186, 298, 342, 588, 786, 1572
Mva1269I GAATGC 2 cut(s) 688, 1668
MvaI CCWGG 6 cut(s) 186, 298, 342, 588, 786, 1572
MvnI CGCG 1 cut(s) 1674
NdeI CATATG 1 cut(s) 1413
NdeII GATC 2 cut(s) 1474, 1498
NlaIV GGNNCC 3 cut(s) 466, 544, 742
NmuCI GTSAC 1 cut(s) 1109
NsiI ATGCAT 2 cut(s) 1413, 1419
NspI RCATGY 4 cut(s) 21, 404, 606, 1693
OliI CACNNNNGTG 1 cut(s) 210
PaeI GCATGC 2 cut(s) 404, 606
PctI GAATGC 2 cut(s) 688, 1668
PfeI GAWTC 4 cut(s) 1235, 1283, 1349, 1554
PflMI CCANNNNNTGG 1 cut(s) 267
PfoI TCCNGGA 2 cut(s) 784, 1570
PkrI GCNGC 3 cut(s) 585, 991, 994
PleI GAGTC 1 cut(s) 535
PpsI GAGTC 1 cut(s) 535
PsiI TTATAA 1 cut(s) 1269
Psp6I CCWGG 6 cut(s) 184, 296, 340, 586, 784, 1570
PspGI CCWGG 6 cut(s) 184, 296, 340, 586, 784, 1570
PspN4I GGNNCC 3 cut(s) 466, 544, 742
PspPI GGNCC 3 cut(s) 188, 308, 1676
PsuI RGATCY 1 cut(s) 1498
RsaI GTAC 6 cut(s) 104, 544, 623, 977, 1040, 1101
RsaNI GTAC 6 cut(s) 103, 543, 622, 976, 1039, 1100
RseI CAYNNNNRTG 6 cut(s) 210, 270, 561, 897, 1416, 1731
SalI GTCGAC 1 cut(s) 1172
SaqAI TTAA 4 cut(s) 575, 750, 882, 1610
SatI GCNGC 3 cut(s) 584, 990, 993
Sau3AI GATC 2 cut(s) 1474, 1498
Sau96I GGNCC 3 cut(s) 188, 308, 1676
ScaI AGTACT 1 cut(s) 104
SchI GAGTC 1 cut(s) 536
ScrFI CCNGG 6 cut(s) 186, 298, 342, 588, 786, 1572
SfaNI GCATC 1 cut(s) 553
SfcI CTRYAG 1 cut(s) 1210
SinI GGWCC 2 cut(s) 188, 308
SmiMI CAYNNNNRTG 6 cut(s) 210, 270, 561, 897, 1416, 1731
SmlI CTYRAG 1 cut(s) 859
SmoI CTYRAG 1 cut(s) 859
SphI GCATGC 2 cut(s) 404, 606
SsiI CCGC 2 cut(s) 1224, 1674
SspI AATATT 1 cut(s) 836
SspMI CTAG 6 cut(s) 420, 734, 809, 914, 1071, 1665
StyD4I CCNGG 6 cut(s) 184, 296, 340, 586, 784, 1570
StyI CCWWGG 3 cut(s) 241, 1369, 1479
TaaI ACNGT 8 cut(s) 220, 391, 430, 626, 724, 880, 1087, 1391
TaiI ACGT 1 cut(s) 234
TaqI TCGA 5 cut(s) 522, 1059, 1091, 1173, 1599
TatI WGTACW 3 cut(s) 102, 975, 1099
TfiI GAWTC 4 cut(s) 1235, 1283, 1349, 1554
Tru1I TTAA 4 cut(s) 575, 750, 882, 1610
Tru9I TTAA 4 cut(s) 575, 750, 882, 1610
TscAI CASTG 5 cut(s) 272, 727, 769, 1092, 1633
TseFI GTSAC 1 cut(s) 1109
TseI GCWGC 3 cut(s) 583, 989, 992
Tsp45I GTSAC 1 cut(s) 1109
TspDTI ATGAA 9 cut(s) 17, 375, 422, 507, 695, 1109, 1248, 1362, 1637
TspGWI ACGGA 1 cut(s) 687
TspRI CASTG 5 cut(s) 272, 727, 769, 1092, 1633
Van91I CCANNNNNTGG 1 cut(s) 267
VpaK11BI GGWCC 2 cut(s) 188, 308
XagI CCTNNNNNAGG 1 cut(s) 1210
XapI RAATTY 5 cut(s) 1001, 1240, 1456, 1714, 1739
XceI RCATGY 4 cut(s) 21, 404, 606, 1693
XcmI CCANNNNNNNNNTGG 1 cut(s) 294
XmiI GTMKAC 1 cut(s) 1173
XspI CTAG 6 cut(s) 420, 734, 809, 914, 1071, 1665
ZrmI AGTACT 1 cut(s) 104
Zsp2I ATGCAT 2 cut(s) 1413, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.