Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 4 cut(s) | 330, 1205, 1395, 1470 |
| AccBSI | CCGCTC | 1 cut(s) | 678 |
| AccI | GTMKAC | 1 cut(s) | 970 |
| AciI | CCGC | 5 cut(s) | 123, 154, 676, 1382, 1782 |
| AclWI | GGATC | 2 cut(s) | 720, 1619 |
| AcoI | YGGCCR | 2 cut(s) | 1009, 1671 |
| AcsI | RAATTY | 5 cut(s) | 88, 1004, 1219, 1650, 1855 |
| AdeI | CACNNNGTG | 1 cut(s) | 420 |
| AfaI | GTAC | 4 cut(s) | 192, 617, 1094, 1440 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 58, 122, 283, 554, 699, 1661, 1741 |
| AflII | CTTAAG | 1 cut(s) | 619 |
| AgsI | TTSAA | 4 cut(s) | 94, 182, 631, 1852 |
| AjnI | CCWGG | 5 cut(s) | 277, 433, 611, 904, 1696 |
| AluBI | AGCT | 9 cut(s) | 518, 1140, 1145, 1211, 1254, 1296, 1331, 1754, 1811 |
| AluI | AGCT | 9 cut(s) | 518, 1140, 1145, 1211, 1254, 1296, 1331, 1754, 1811 |
| Alw26I | GTCTC | 3 cut(s) | 353, 1589, 1723 |
| AlwI | GGATC | 2 cut(s) | 720, 1619 |
| Ama87I | CYCGRG | 2 cut(s) | 404, 1306 |
| AoxI | GGCC | 4 cut(s) | 280, 531, 1009, 1671 |
| ApeKI | GCWGC | 7 cut(s) | 126, 703, 737, 1106, 1109, 1254, 1754 |
| ApoI | RAATTY | 5 cut(s) | 88, 1004, 1219, 1650, 1855 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 106 |
| AspLEI | GCGC | 1 cut(s) | 954 |
| AspS9I | GGNCC | 3 cut(s) | 281, 401, 531 |
| AsuC2I | CCSGG | 2 cut(s) | 284, 708 |
| AsuHPI | GGTGA | 4 cut(s) | 220, 1056, 1312, 1465 |
| AsuNHI | GCTAGC | 1 cut(s) | 518 |
| AvaI | CYCGRG | 2 cut(s) | 404, 1306 |
| AvaII | GGWCC | 1 cut(s) | 401 |
| BalI | TGGCCA | 2 cut(s) | 1011, 1673 |
| BauI | CACGAG | 1 cut(s) | 513 |
| BbvI | GCAGC | 7 cut(s) | 113, 715, 749, 1118, 1121, 1241, 1741 |
| BccI | CCATC | 3 cut(s) | 392, 1659, 1682 |
| BceAI | ACGGC | 1 cut(s) | 136 |
| BciT130I | CCWGG | 5 cut(s) | 279, 435, 613, 906, 1698 |
| BcnI | CCSGG | 2 cut(s) | 284, 708 |
| BcoDI | GTCTC | 3 cut(s) | 353, 1589, 1723 |
| BfaI | CTAG | 5 cut(s) | 33, 519, 854, 981, 1791 |
| BfoI | RGCGCY | 1 cut(s) | 955 |
| BfrI | CTTAAG | 1 cut(s) | 619 |
| BglII | AGATCT | 1 cut(s) | 1318 |
| BlpI | GCTNAGC | 1 cut(s) | 1141 |
| Bme1390I | CCNGG | 7 cut(s) | 279, 284, 435, 613, 708, 906, 1698 |
| Bme18I | GGWCC | 1 cut(s) | 401 |
| BmeT110I | CYCGRG | 2 cut(s) | 404, 1306 |
| BmgT120I | GGNCC | 3 cut(s) | 281, 401, 531 |
| BmiI | GGNNCC | 3 cut(s) | 403, 532, 862 |
| BmrFI | CCNGG | 7 cut(s) | 279, 284, 435, 613, 708, 906, 1698 |
| BmsI | GCATC | 2 cut(s) | 673, 1852 |
| BmtI | GCTAGC | 1 cut(s) | 522 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1141 |
| BpuEI | CTTGAG | 1 cut(s) | 1270 |
| BpuMI | CCSGG | 2 cut(s) | 284, 708 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1268 |
| BsaI | GGTCTC | 2 cut(s) | 353, 1589 |
| BsaJI | CCNNGG | 8 cut(s) | 277, 389, 434, 707, 729, 904, 1307, 1495 |
| BsaWI | WCCGGW | 1 cut(s) | 115 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1506, 1536 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 58, 122, 283, 554, 699, 1661, 1741 |
| Bse1I | ACTGG | 2 cut(s) | 365, 512 |
| Bse3DI | GCAATG | 1 cut(s) | 52 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1268 |
| BseBI | CCWGG | 5 cut(s) | 279, 435, 613, 906, 1698 |
| BseDI | CCNNGG | 8 cut(s) | 277, 389, 434, 707, 729, 904, 1307, 1495 |
| BseGI | GGATG | 5 cut(s) | 608, 806, 925, 1528, 1670 |
| BseJI | GATNNNNATC | 1 cut(s) | 1268 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 58, 122, 283, 554, 699, 1661, 1741 |
| BseMI | GCAATG | 1 cut(s) | 52 |
| BseMII | CTCAG | 1 cut(s) | 1110 |
| BseNI | ACTGG | 2 cut(s) | 365, 512 |
| BseRI | GAGGAG | 1 cut(s) | 1620 |
| BseXI | GCAGC | 7 cut(s) | 113, 715, 749, 1118, 1121, 1241, 1741 |
| BseYI | CCCAGC | 2 cut(s) | 1296, 1807 |
| BsgI | GTGCAG | 1 cut(s) | 1240 |
| BshFI | GGCC | 4 cut(s) | 282, 533, 1011, 1673 |
| BsiHKCI | CYCGRG | 2 cut(s) | 404, 1306 |
| BsiSI | CCGG | 4 cut(s) | 116, 284, 707, 949 |
| BslFI | GGGAC | 6 cut(s) | 387, 451, 1154, 1459, 1513, 1790 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 58, 122, 283, 554, 699, 1661, 1741 |
| BsmAI | GTCTC | 3 cut(s) | 353, 1589, 1723 |
| BsmFI | GGGAC | 6 cut(s) | 387, 451, 1154, 1459, 1513, 1790 |
| BsmI | GAATGC | 1 cut(s) | 1757 |
| BsnI | GGCC | 4 cut(s) | 282, 533, 1011, 1673 |
| Bso31I | GGTCTC | 2 cut(s) | 353, 1589 |
| BsoBI | CYCGRG | 2 cut(s) | 404, 1306 |
| Bsp143I | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1141 |
| Bsp19I | CCATGG | 1 cut(s) | 389 |
| BspACI | CCGC | 5 cut(s) | 123, 154, 676, 1382, 1782 |
| BspANI | GGCC | 4 cut(s) | 282, 533, 1011, 1673 |
| BspCNI | CTCAG | 1 cut(s) | 1109 |
| BspLI | GGNNCC | 3 cut(s) | 403, 532, 862 |
| BspOI | GCTAGC | 1 cut(s) | 522 |
| BspPI | GGATC | 2 cut(s) | 720, 1619 |
| BspTI | CTTAAG | 1 cut(s) | 619 |
| BspTNI | GGTCTC | 2 cut(s) | 353, 1589 |
| BsrBI | CCGCTC | 1 cut(s) | 678 |
| BsrDI | GCAATG | 1 cut(s) | 52 |
| BsrI | ACTGG | 2 cut(s) | 365, 512 |
| BssECI | CCNNGG | 8 cut(s) | 277, 389, 434, 707, 729, 904, 1307, 1495 |
| BssMI | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| BssSI | CACGAG | 1 cut(s) | 513 |
| BssT1I | CCWWGG | 3 cut(s) | 389, 729, 1495 |
| Bst2BI | CACGAG | 1 cut(s) | 513 |
| Bst2UI | CCWGG | 5 cut(s) | 279, 435, 613, 906, 1698 |
| Bst4CI | ACNGT | 6 cut(s) | 420, 484, 553, 844, 1429, 1438 |
| BstAFI | CTTAAG | 1 cut(s) | 619 |
| BstC8I | GCNNGC | 3 cut(s) | 495, 520, 1329 |
| BstDEI | CTNAG | 3 cut(s) | 380, 1096, 1141 |
| BstDSI | CCRYGG | 1 cut(s) | 389 |
| BstF5I | GGATG | 5 cut(s) | 608, 806, 925, 1528, 1670 |
| BstH2I | RGCGCY | 1 cut(s) | 955 |
| BstHHI | GCGC | 1 cut(s) | 954 |
| BstKTI | GATC | 6 cut(s) | 171, 715, 940, 1321, 1627, 1888 |
| BstMAI | GTCTC | 3 cut(s) | 353, 1589, 1723 |
| BstMBI | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1251 |
| BstNI | CCWGG | 5 cut(s) | 279, 435, 613, 906, 1698 |
| BstNSI | RCATGY | 3 cut(s) | 256, 497, 1819 |
| BstSCI | CCNGG | 7 cut(s) | 277, 282, 433, 611, 706, 904, 1696 |
| BstV1I | GCAGC | 7 cut(s) | 113, 715, 749, 1118, 1121, 1241, 1741 |
| BstX2I | RGATCY | 2 cut(s) | 712, 1318 |
| BstYI | RGATCY | 2 cut(s) | 712, 1318 |
| BsuRI | GGCC | 4 cut(s) | 282, 533, 1011, 1673 |
| BtgI | CCRYGG | 1 cut(s) | 389 |
| BtsCI | GGATG | 5 cut(s) | 608, 806, 925, 1528, 1670 |
| BtsI | GCAGTG | 1 cut(s) | 1532 |
| BtsIMutI | CAGTG | 4 cut(s) | 358, 425, 840, 1532 |
| Cac8I | GCNNGC | 3 cut(s) | 495, 520, 1329 |
| CfoI | GCGC | 1 cut(s) | 954 |
| Cfr13I | GGNCC | 3 cut(s) | 281, 401, 531 |
| Csp6I | GTAC | 4 cut(s) | 191, 616, 1093, 1439 |
| CviQI | GTAC | 4 cut(s) | 191, 616, 1093, 1439 |
| DdeI | CTNAG | 3 cut(s) | 380, 1096, 1141 |
| DpnI | GATC | 6 cut(s) | 170, 714, 939, 1320, 1626, 1887 |
| DpnII | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| DraIII | CACNNNGTG | 1 cut(s) | 420 |
| EaeI | YGGCCR | 2 cut(s) | 1009, 1671 |
| Eco130I | CCWWGG | 3 cut(s) | 389, 729, 1495 |
| Eco31I | GGTCTC | 2 cut(s) | 353, 1589 |
| Eco47I | GGWCC | 1 cut(s) | 401 |
| Eco88I | CYCGRG | 2 cut(s) | 404, 1306 |
| EcoRI | GAATTC | 2 cut(s) | 1219, 1650 |
| EcoRII | CCWGG | 5 cut(s) | 277, 433, 611, 904, 1696 |
| EcoT14I | CCWWGG | 3 cut(s) | 389, 729, 1495 |
| EcoT22I | ATGCAT | 2 cut(s) | 688, 1545 |
| ErhI | CCWWGG | 3 cut(s) | 389, 729, 1495 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1129, 1161 |
| FaqI | GGGAC | 6 cut(s) | 387, 451, 1154, 1459, 1513, 1790 |
| FauI | CCCGC | 1 cut(s) | 683 |
| FauNDI | CATATG | 2 cut(s) | 1539, 1722 |
| FblI | GTMKAC | 1 cut(s) | 970 |
| FokI | GGATG | 5 cut(s) | 595, 793, 932, 1515, 1677 |
| FspBI | CTAG | 5 cut(s) | 33, 519, 854, 981, 1791 |
| GlaI | GCGC | 1 cut(s) | 953 |
| GsaI | CCCAGC | 2 cut(s) | 1300, 1811 |
| HaeII | RGCGCY | 1 cut(s) | 955 |
| HaeIII | GGCC | 4 cut(s) | 282, 533, 1011, 1673 |
| HapII | CCGG | 4 cut(s) | 116, 284, 707, 949 |
| HhaI | GCGC | 1 cut(s) | 954 |
| Hin6I | GCGC | 1 cut(s) | 952 |
| HinP1I | GCGC | 1 cut(s) | 952 |
| HincII | GTYRAC | 1 cut(s) | 1434 |
| HindII | GTYRAC | 1 cut(s) | 1434 |
| HindIII | AAGCTT | 2 cut(s) | 1138, 1329 |
| HinfI | GANTC | 6 cut(s) | 133, 803, 1238, 1475, 1525, 1680 |
| HpaI | GTTAAC | 1 cut(s) | 1434 |
| HpaII | CCGG | 4 cut(s) | 116, 284, 707, 949 |
| HphI | GGTGA | 4 cut(s) | 220, 1056, 1312, 1465 |
| Hpy166II | GTNNAC | 5 cut(s) | 265, 971, 1303, 1357, 1434 |
| Hpy188III | TCNNGA | 5 cut(s) | 99, 163, 404, 1249, 1373 |
| Hpy8I | GTNNAC | 5 cut(s) | 265, 971, 1303, 1357, 1434 |
| Hpy99I | CGWCG | 1 cut(s) | 750 |
| HpyAV | CCTTC | 4 cut(s) | 96, 470, 1450, 1830 |
| HpyCH4III | ACNGT | 6 cut(s) | 420, 484, 553, 844, 1429, 1438 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1251 |
| HpyF3I | CTNAG | 3 cut(s) | 380, 1096, 1141 |
| HspAI | GCGC | 1 cut(s) | 952 |
| KspAI | GTTAAC | 1 cut(s) | 1434 |
| Kzo9I | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| LmnI | GCTCC | 2 cut(s) | 731, 860 |
| Lsp1109I | GCAGC | 7 cut(s) | 113, 715, 749, 1118, 1121, 1241, 1741 |
| LweI | GCATC | 2 cut(s) | 673, 1852 |
| MaeI | CTAG | 5 cut(s) | 33, 519, 854, 981, 1791 |
| MaeIII | GTNAC | 4 cut(s) | 16, 503, 1018, 1636 |
| MalI | GATC | 6 cut(s) | 170, 714, 939, 1320, 1626, 1887 |
| MbiI | CCGCTC | 1 cut(s) | 678 |
| MboI | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| MboII | GAAGA | 7 cut(s) | 485, 599, 767, 770, 1247, 1780, 1888 |
| MflI | RGATCY | 2 cut(s) | 712, 1318 |
| MlsI | TGGCCA | 2 cut(s) | 1011, 1673 |
| MluNI | TGGCCA | 2 cut(s) | 1011, 1673 |
| MlyI | GAGTC | 1 cut(s) | 1484 |
| MmeI | TCCRAC | 6 cut(s) | 454, 535, 728, 829, 1082, 1546 |
| Mox20I | TGGCCA | 2 cut(s) | 1011, 1673 |
| Mph1103I | ATGCAT | 2 cut(s) | 688, 1545 |
| MroXI | GAANNNNTTC | 1 cut(s) | 106 |
| MscI | TGGCCA | 2 cut(s) | 1011, 1673 |
| MseI | TTAA | 7 cut(s) | 212, 620, 1115, 1134, 1433, 1463, 1614 |
| MslI | CAYNNNNRTG | 2 cut(s) | 363, 1542 |
| Msp20I | TGGCCA | 2 cut(s) | 1011, 1673 |
| MspA1I | CMGCKG | 1 cut(s) | 1784 |
| MspCI | CTTAAG | 1 cut(s) | 619 |
| MspI | CCGG | 4 cut(s) | 116, 284, 707, 949 |
| MspR9I | CCNGG | 7 cut(s) | 279, 284, 435, 613, 708, 906, 1698 |
| Mva1269I | GAATGC | 1 cut(s) | 1757 |
| MvaI | CCWGG | 5 cut(s) | 279, 435, 613, 906, 1698 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1251 |
| NciI | CCSGG | 2 cut(s) | 284, 708 |
| NcoI | CCATGG | 1 cut(s) | 389 |
| NdeI | CATATG | 2 cut(s) | 1539, 1722 |
| NdeII | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| NheI | GCTAGC | 1 cut(s) | 518 |
| NlaIV | GGNNCC | 3 cut(s) | 403, 532, 862 |
| NmuCI | GTSAC | 3 cut(s) | 16, 503, 1636 |
| NsiI | ATGCAT | 2 cut(s) | 688, 1545 |
| NspI | RCATGY | 3 cut(s) | 256, 497, 1819 |
| PaeI | GCATGC | 1 cut(s) | 497 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 137, 1278 |
| PctI | GAATGC | 1 cut(s) | 1757 |
| PdmI | GAANNNNTTC | 1 cut(s) | 106 |
| PfeI | GAWTC | 5 cut(s) | 133, 803, 1238, 1525, 1680 |
| PleI | GAGTC | 1 cut(s) | 1483 |
| PpsI | GAGTC | 1 cut(s) | 1483 |
| PsiI | TTATAA | 4 cut(s) | 330, 1205, 1395, 1470 |
| Psp6I | CCWGG | 5 cut(s) | 277, 433, 611, 904, 1696 |
| PspFI | CCCAGC | 2 cut(s) | 1296, 1807 |
| PspGI | CCWGG | 5 cut(s) | 277, 433, 611, 904, 1696 |
| PspN4I | GGNNCC | 3 cut(s) | 403, 532, 862 |
| PspPI | GGNCC | 3 cut(s) | 281, 401, 531 |
| PsuI | RGATCY | 2 cut(s) | 712, 1318 |
| RsaI | GTAC | 4 cut(s) | 192, 617, 1094, 1440 |
| RsaNI | GTAC | 4 cut(s) | 191, 616, 1093, 1439 |
| RseI | CAYNNNNRTG | 2 cut(s) | 363, 1542 |
| SaqAI | TTAA | 7 cut(s) | 212, 620, 1115, 1134, 1433, 1463, 1614 |
| Sau3AI | GATC | 6 cut(s) | 168, 712, 937, 1318, 1624, 1885 |
| Sau96I | GGNCC | 3 cut(s) | 281, 401, 531 |
| SchI | GAGTC | 1 cut(s) | 1484 |
| ScrFI | CCNGG | 7 cut(s) | 279, 284, 435, 613, 708, 906, 1698 |
| SfaNI | GCATC | 2 cut(s) | 673, 1852 |
| SinI | GGWCC | 1 cut(s) | 401 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 363, 1542 |
| SmlI | CTYRAG | 2 cut(s) | 619, 1249 |
| SmoI | CTYRAG | 2 cut(s) | 619, 1249 |
| SphI | GCATGC | 1 cut(s) | 497 |
| SsiI | CCGC | 5 cut(s) | 123, 154, 676, 1382, 1782 |
| SspMI | CTAG | 5 cut(s) | 33, 519, 854, 981, 1791 |
| StyD4I | CCNGG | 7 cut(s) | 277, 282, 433, 611, 706, 904, 1696 |
| StyI | CCWWGG | 3 cut(s) | 389, 729, 1495 |
| TaaI | ACNGT | 6 cut(s) | 420, 484, 553, 844, 1429, 1438 |
| TaqI | TCGA | 3 cut(s) | 131, 1418, 1800 |
| TaqII | GACCGA | 1 cut(s) | 1613 |
| TatI | WGTACW | 3 cut(s) | 190, 1092, 1438 |
| TauI | GCSGC | 3 cut(s) | 126, 156, 1384 |
| TfiI | GAWTC | 5 cut(s) | 133, 803, 1238, 1525, 1680 |
| Tru1I | TTAA | 7 cut(s) | 212, 620, 1115, 1134, 1433, 1463, 1614 |
| Tru9I | TTAA | 7 cut(s) | 212, 620, 1115, 1134, 1433, 1463, 1614 |
| TscAI | CASTG | 4 cut(s) | 365, 425, 847, 1539 |
| TseFI | GTSAC | 3 cut(s) | 16, 503, 1636 |
| TseI | GCWGC | 7 cut(s) | 126, 703, 737, 1106, 1109, 1254, 1754 |
| Tsp45I | GTSAC | 3 cut(s) | 16, 503, 1636 |
| TspDTI | ATGAA | 8 cut(s) | 287, 515, 600, 668, 795, 1232, 1672, 1750 |
| TspGWI | ACGGA | 2 cut(s) | 485, 873 |
| TspRI | CASTG | 4 cut(s) | 365, 425, 847, 1539 |
| Vha464I | CTTAAG | 1 cut(s) | 619 |
| VpaK11BI | GGWCC | 1 cut(s) | 401 |
| XapI | RAATTY | 5 cut(s) | 88, 1004, 1219, 1650, 1855 |
| XceI | RCATGY | 3 cut(s) | 256, 497, 1819 |
| XmiI | GTMKAC | 1 cut(s) | 970 |
| XmnI | GAANNNNTTC | 1 cut(s) | 106 |
| XspI | CTAG | 5 cut(s) | 33, 519, 854, 981, 1791 |
| Zsp2I | ATGCAT | 2 cut(s) | 688, 1545 |