Rh2CG494700

Lignin degradation and detoxification of lignin-derived products

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
66401034 .. 66403518
2485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG494700.1

Sequence Viewer

Length: 1785 bp
ATGTCGACACAGTTATTTCTGGTGTTCGCTGTTCTTATTATCATCCTACAGCTCTTCATCTCTGTGGCTCGAGCCGAAGTGCATTACTACGATTTTATAGTTAAGGAGGTAAACTTCACTAGATTGTGTGAATCAAAGCTCATGTTAGTAGTAAACGAGAGCTATCCAGGTCCAGCAATACGAGCTCGCAGAGGGGATACAATTTATGTTAATGTTTACAATCAAGGATTTTATGGTTTCACCATTCACTGGCATGGAGTAAAGCAACCAAGAAATCCATGGTTTGATGGCCCAGAATATGTGACACAATGCCCAATATCACCGGGAACAAATTTTACCTATCAAGTTCAGTTGACCACAGAAGAAGGAACTCTGTGGTGGCATGCTCATAGTGACTGGACTAGGGCAAGCGTTCACGGTGCCATTGTCATCTTGCCTGCTCTTGGAACAACATTTCCATTTCCTGAGCCTGATGAAGAGGAGATCATTGTGTTCGGATCTTGGTATTTGGGAAATTTGAAAGAACAGGTTGACGAGTGTCTGGACCCTGCAACCAACTCTAATTTACCCATAGCAGCTGGTTACACAATTAATGGCCGGCTTGGAGATTTTTCTCCATGCTCCAAAAATACAACGTATCGTCGTAAGGTGGACTATGGCAAGACATATCTTCTTCGGATAGTGAACGCAAACATCGATGTAGAGTTTTACTTTGCCATTGCTGAACACAACCTCACTGTGGTTGGCTTGGACGGCTCCTATACCAAACCCATCAACACAGGCTATATAGTGATAGCCCCTGGACAAACAATGGACGTGTTGCTCAACACAAATTCGGCTGTGGGGAGCTATTACATGGTCGGAAGAGAATACCTAAGTGCTACAGTTGATACAGCATCTGACGATGATGCTATTGCAATCCTTGAATATAATGGCAACTATACCACTTCAGAAGCTCCTTTATTACCCGAACAGATTCCTGATTCCTTATCCCAAGCACCAGCATTCAACTTCTACAGAAAAATCAGAAGCTTAGCCACCCCAGAATATCCTATAAGTGTCCCAAAAGAGAGTGATATCACTACCAAAATGTACATAACAGCTTCCGCCAACGCTCTTTACTGTACTCCAGATTTAGGTCCCACATGCGTCAATATATCTTTTGCTGCAAGCGTCAATAATATTAGTTGGGTCAATCCGAGGGAATCTATCTTGCAAGCCTACTACAACAACATAAGCGAGCCGGTTTATGAAACAGATTTCCCAGATGAACCGCCTGTTTATTTTAACTTCACTGAAATAGCGATGACACTAGATCCAGTGTTAACAGTTCAAGGGACAAAGGTCAAGGTGCTAGAATATAATGAAACAGTTGAGATGGTGTTTCAAGGAACTGATGTGATGGGAGGTTCCGTGAATCATCCAATGCACCTGCATGGACATAGCTTTTATGTGCTTGGTTTTGGTTTTGGGAATTACTTCGCCGAGAGGGACTCAAAAACCTTCAATTTGATTGATCCTCCTTATGTAGCAACGTTCATAACTCCAAAAAATGGATGGGTAGCTCTCAGATTCGTAGCGAATAATCCAGGTGTATGGTTTTGGCATTGTCATATGGAGAGACACTTGACATGGGGTATGGAGTCTGCTTTTGTAGTGAAGAACGGGGGCACACCTGAGACTACTATGCTCCCCCCTCCGGCTACAATGCCTTCCTGTGATGTTCCATTCGATTCTGCTACTATGCTAAGTCACGCGGAATTGATTAATAATCAACCAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

594

Amino Acids

66.55

Weight (kDa)

4.85

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 34 - 146 2.7e-38 Multicopper oxidase
Cu-oxidase PF00394 161 - 313 2.6e-31 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 555 1.4e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1440
Acc36I ACCTGC 1 cut(s) 1440
AccB1I GGYRCC 1 cut(s) 419
AccB7I CCANNNNNTGG 2 cut(s) 249, 1553
AccI GTMKAC 1 cut(s) 5
AccII CGCG 1 cut(s) 1757
AciI CCGC 3 cut(s) 1107, 1274, 1757
AclI AACGTT 1 cut(s) 1535
AclWI GGATC 3 cut(s) 505, 1310, 1511
AcoI YGGCCR 1 cut(s) 595
AcsI RAATTY 3 cut(s) 331, 514, 832
AcuI CTGAAG 1 cut(s) 933
AfaI GTAC 2 cut(s) 1094, 1126
AfiI CCNNNNNNNGG 6 cut(s) 249, 443, 739, 1136, 1553, 1699
AflIII ACRYGT 1 cut(s) 816
AgsI TTSAA 6 cut(s) 520, 926, 1009, 1334, 1388, 1507
AjiI CACGTC 1 cut(s) 817
AjnI CCWGG 3 cut(s) 166, 799, 1588
AloI GAACNNNNNNTCC 2 cut(s) 439, 471
Alw21I GWGCWC 1 cut(s) 187
Alw26I GTCTC 2 cut(s) 1615, 1673
AlwI GGATC 3 cut(s) 505, 1310, 1511
AlwNI CAGNNNCTG 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 69
AoxI GGCC 2 cut(s) 289, 595
ApeKI GCWGC 2 cut(s) 575, 1166
ApoI RAATTY 3 cut(s) 331, 514, 832
AseI ATTAAT 2 cut(s) 591, 1767
Asp700I GAANNNNTTC 2 cut(s) 975, 1478
AspS9I GGNCC 4 cut(s) 170, 290, 544, 1139
AsuC2I CCSGG 1 cut(s) 324
AsuHPI GGTGA 2 cut(s) 232, 312
AvaI CYCGRG 1 cut(s) 69
AvaII GGWCC 3 cut(s) 170, 544, 1139
BaeGI GKGCMC 1 cut(s) 1673
BanI GGYRCC 1 cut(s) 419
BanII GRGCYC 1 cut(s) 187
Bbv12I GWGCWC 1 cut(s) 187
BbvI GCAGC 2 cut(s) 587, 1153
BccI CCATC 5 cut(s) 281, 779, 1372, 1396, 1551
BceAI ACGGC 1 cut(s) 769
BciT130I CCWGG 3 cut(s) 168, 801, 1590
BciVI GTATCC 1 cut(s) 190
BcnI CCSGG 1 cut(s) 324
BcoDI GTCTC 2 cut(s) 1615, 1673
BfaI CTAG 4 cut(s) 120, 402, 1313, 1355
BfmI CTRYAG 3 cut(s) 47, 882, 1015
BfuAI ACCTGC 1 cut(s) 1440
BfuI GTATCC 1 cut(s) 190
BisI GCNGC 2 cut(s) 576, 1167
BlpI GCTNAGC 1 cut(s) 1033
BlsI GCNGC 2 cut(s) 577, 1168
Bme1390I CCNGG 4 cut(s) 168, 324, 801, 1590
Bme18I GGWCC 3 cut(s) 170, 544, 1139
BmeT110I CYCGRG 1 cut(s) 69
BmgBI CACGTC 1 cut(s) 817
BmgT120I GGNCC 4 cut(s) 170, 290, 544, 1139
BmiI GGNNCC 5 cut(s) 421, 546, 757, 1141, 1411
BmrFI CCNGG 4 cut(s) 168, 324, 801, 1590
BmsI GCATC 2 cut(s) 898, 905
BoxI GACNNNNGTC 2 cut(s) 537, 1343
BplI GAGNNNNNCTC 2 cut(s) 1478, 1510
BpmI CTGGAG 1 cut(s) 1113
Bpu10I CCTNAGC 1 cut(s) 465
Bpu1102I GCTNAGC 1 cut(s) 1033
BpuMI CCSGG 1 cut(s) 324
Bsa29I ATCGAT 1 cut(s) 696
BsaJI CCNNGG 3 cut(s) 278, 799, 1199
BsaXI ACNNNNNCTCC 2 cut(s) 1398, 1428
Bsc4I CCNNNNNNNGG 6 cut(s) 249, 443, 739, 1136, 1553, 1699
Bse118I RCCGGY 2 cut(s) 597, 1243
Bse1I ACTGG 3 cut(s) 254, 401, 1319
Bse3DI GCAATG 1 cut(s) 717
BseBI CCWGG 3 cut(s) 168, 801, 1590
BseCI ATCGAT 1 cut(s) 696
BseDI CCNNGG 3 cut(s) 278, 799, 1199
BseGI GGATG 3 cut(s) 42, 1420, 1562
BseLI CCNNNNNNNGG 6 cut(s) 249, 443, 739, 1136, 1553, 1699
BseMI GCAATG 1 cut(s) 717
BseMII CTCAG 3 cut(s) 456, 1582, 1668
BseNI ACTGG 3 cut(s) 254, 401, 1319
BseRI GAGGAG 1 cut(s) 494
BseSI GKGCMC 1 cut(s) 1673
BseXI GCAGC 2 cut(s) 587, 1153
Bsh1236I CGCG 1 cut(s) 1757
BshFI GGCC 2 cut(s) 291, 597
BshNI GGYRCC 1 cut(s) 419
BshVI ATCGAT 1 cut(s) 696
BsiHKAI GWGCWC 1 cut(s) 187
BsiHKCI CYCGRG 1 cut(s) 69
BsiSI CCGG 4 cut(s) 323, 598, 1244, 1700
BslFI GGGAC 4 cut(s) 1046, 1125, 1351, 1505
BslI CCNNNNNNNGG 6 cut(s) 249, 443, 739, 1136, 1553, 1699
BsmAI GTCTC 2 cut(s) 1615, 1673
BsmFI GGGAC 4 cut(s) 1046, 1125, 1351, 1505
BsmI GAATGC 1 cut(s) 1004
BsnI GGCC 2 cut(s) 291, 597
BsoBI CYCGRG 1 cut(s) 69
Bsp1286I GDGCHC 2 cut(s) 187, 1673
Bsp1407I TGTACA 1 cut(s) 1092
Bsp143I GATC 4 cut(s) 483, 497, 1315, 1516
Bsp1720I GCTNAGC 1 cut(s) 1033
Bsp19I CCATGG 1 cut(s) 278
BspACI CCGC 3 cut(s) 1107, 1274, 1757
BspANI GGCC 2 cut(s) 291, 597
BspCNI CTCAG 3 cut(s) 457, 1581, 1669
BspDI ATCGAT 1 cut(s) 696
BspFNI CGCG 1 cut(s) 1757
BspLI GGNNCC 5 cut(s) 421, 546, 757, 1141, 1411
BspMI ACCTGC 1 cut(s) 1440
BspPI GGATC 3 cut(s) 505, 1310, 1511
BspQI GCTCTTC 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 419
BsrDI GCAATG 1 cut(s) 717
BsrFI RCCGGY 2 cut(s) 597, 1243
BsrGI TGTACA 1 cut(s) 1092
BsrI ACTGG 3 cut(s) 254, 401, 1319
BssAI RCCGGY 2 cut(s) 597, 1243
BssECI CCNNGG 3 cut(s) 278, 799, 1199
BssMI GATC 4 cut(s) 483, 497, 1315, 1516
BssT1I CCWWGG 1 cut(s) 278
Bst2UI CCWGG 3 cut(s) 168, 801, 1590
Bst4CI ACNGT 7 cut(s) 12, 419, 739, 886, 1124, 1330, 1372
Bst6I CTCTTC 3 cut(s) 59, 471, 859
BstAUI TGTACA 1 cut(s) 1092
BstC8I GCNNGC 8 cut(s) 187, 384, 409, 438, 599, 1171, 1218, 1241
BstDEI CTNAG 6 cut(s) 465, 875, 1033, 1568, 1677, 1748
BstDSI CCRYGG 1 cut(s) 278
BstF5I GGATG 3 cut(s) 42, 1420, 1562
BstFNI CGCG 1 cut(s) 1757
BstKTI GATC 4 cut(s) 486, 500, 1318, 1519
BstMAI GTCTC 2 cut(s) 1615, 1673
BstMBI GATC 4 cut(s) 483, 497, 1315, 1516
BstMWI GCNNNNNNNGC 2 cut(s) 182, 753
BstNI CCWGG 3 cut(s) 168, 801, 1590
BstNSI RCATGY 2 cut(s) 386, 1149
BstPAI GACNNNNGTC 2 cut(s) 537, 1343
BstSCI CCNGG 4 cut(s) 166, 322, 799, 1588
BstSFI CTRYAG 3 cut(s) 47, 882, 1015
BstSLI GKGCMC 1 cut(s) 1673
BstUI CGCG 1 cut(s) 1757
BstV1I GCAGC 2 cut(s) 587, 1153
BstX2I RGATCY 2 cut(s) 497, 1315
BstXI CCANNNNNNTGG 1 cut(s) 1596
BstYI RGATCY 2 cut(s) 497, 1315
Bsu15I ATCGAT 1 cut(s) 696
BsuI GTATCC 1 cut(s) 190
BsuRI GGCC 2 cut(s) 291, 597
BsuTUI ATCGAT 1 cut(s) 696
BtgI CCRYGG 1 cut(s) 278
BtgZI GCGATG 1 cut(s) 1319
BtrI CACGTC 1 cut(s) 817
BtsCI GGATG 3 cut(s) 42, 1420, 1562
BtsIMutI CAGTG 4 cut(s) 247, 735, 1293, 1326
BveI ACCTGC 1 cut(s) 1440
Cac8I GCNNGC 8 cut(s) 187, 384, 409, 438, 599, 1171, 1218, 1241
CaiI CAGNNNCTG 1 cut(s) 899
Cfr10I RCCGGY 2 cut(s) 597, 1243
Cfr13I GGNCC 4 cut(s) 170, 290, 544, 1139
ClaI ATCGAT 1 cut(s) 696
CseI GACGC 2 cut(s) 1138, 1162
Csp6I GTAC 2 cut(s) 1093, 1125
CviAII CATG 9 cut(s) 142, 254, 279, 383, 618, 856, 1146, 1436, 1632
CviQI GTAC 2 cut(s) 1093, 1125
DdeI CTNAG 6 cut(s) 465, 875, 1033, 1568, 1677, 1748
DpnI GATC 4 cut(s) 485, 499, 1317, 1518
DpnII GATC 4 cut(s) 483, 497, 1315, 1516
EaeI YGGCCR 1 cut(s) 595
Eam1104I CTCTTC 3 cut(s) 59, 471, 859
EarI CTCTTC 3 cut(s) 59, 471, 859
EciI GGCGGA 1 cut(s) 1096
Ecl136II GAGCTC 1 cut(s) 185
Eco130I CCWWGG 1 cut(s) 278
Eco24I GRGCYC 1 cut(s) 187
Eco32I GATATC 1 cut(s) 1078
Eco47I GGWCC 3 cut(s) 170, 544, 1139
Eco53kI GAGCTC 1 cut(s) 185
Eco57I CTGAAG 1 cut(s) 933
Eco88I CYCGRG 1 cut(s) 69
EcoICRI GAGCTC 1 cut(s) 185
EcoO109I RGGNCCY 1 cut(s) 1139
EcoRII CCWGG 3 cut(s) 166, 799, 1588
EcoRV GATATC 1 cut(s) 1078
EcoT14I CCWWGG 1 cut(s) 278
EcoT38I GRGCYC 1 cut(s) 187
ErhI CCWWGG 1 cut(s) 278
FaeI CATG 9 cut(s) 145, 257, 282, 386, 621, 859, 1149, 1439, 1635
FaqI GGGAC 4 cut(s) 1046, 1125, 1351, 1505
FatI CATG 9 cut(s) 141, 253, 278, 382, 617, 855, 1145, 1435, 1631
FauNDI CATATG 1 cut(s) 1614
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 2 cut(s) 576, 1167
FokI GGATG 3 cut(s) 29, 1407, 1569
FriOI GRGCYC 1 cut(s) 187
Fsp4HI GCNGC 2 cut(s) 576, 1167
FspBI CTAG 4 cut(s) 120, 402, 1313, 1355
GluI GCNGC 2 cut(s) 576, 1167
GsuI CTGGAG 1 cut(s) 1113
HaeIII GGCC 2 cut(s) 291, 597
HapII CCGG 4 cut(s) 323, 598, 1244, 1700
HgaI GACGC 2 cut(s) 1138, 1162
Hin1II CATG 9 cut(s) 145, 257, 282, 386, 621, 859, 1149, 1439, 1635
HincII GTYRAC 4 cut(s) 6, 354, 532, 1326
HindII GTYRAC 4 cut(s) 6, 354, 532, 1326
HindIII AAGCTT 1 cut(s) 1030
HinfI GANTC 9 cut(s) 131, 976, 983, 1205, 1417, 1493, 1572, 1643, 1733
HpaI GTTAAC 1 cut(s) 1326
HpaII CCGG 4 cut(s) 323, 598, 1244, 1700
HphI GGTGA 2 cut(s) 232, 312
Hpy188I TCNGA 8 cut(s) 497, 678, 863, 901, 952, 1028, 1200, 1571
Hpy188III TCNNGA 4 cut(s) 464, 542, 980, 1130
Hpy99I CGWCG 1 cut(s) 645
HpyAV CCTTC 3 cut(s) 359, 1513, 1722
HpyCH4III ACNGT 7 cut(s) 12, 419, 739, 886, 1124, 1330, 1372
HpyCH4IV ACGT 3 cut(s) 635, 816, 1535
HpyCH4V TGCA 7 cut(s) 82, 551, 917, 1169, 1216, 1429, 1435
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 753
HpyF3I CTNAG 6 cut(s) 465, 875, 1033, 1568, 1677, 1748
HpySE526I ACGT 3 cut(s) 635, 816, 1535
Hsp92II CATG 9 cut(s) 145, 257, 282, 386, 621, 859, 1149, 1439, 1635
KroI GCCGGC 1 cut(s) 597
KroNI GCCGGC 1 cut(s) 599
KspAI GTTAAC 1 cut(s) 1326
Kzo9I GATC 4 cut(s) 483, 497, 1315, 1516
LguI GCTCTTC 1 cut(s) 59
LmnI GCTCC 5 cut(s) 626, 761, 846, 961, 1695
Lsp1109I GCAGC 2 cut(s) 587, 1153
LweI GCATC 2 cut(s) 898, 905
MaeI CTAG 4 cut(s) 120, 402, 1313, 1355
MaeII ACGT 3 cut(s) 635, 816, 1535
MaeIII GTNAC 4 cut(s) 301, 392, 581, 1751
MalI GATC 4 cut(s) 485, 499, 1317, 1518
MboI GATC 4 cut(s) 483, 497, 1315, 1516
MboII GAAGA 7 cut(s) 46, 374, 488, 662, 665, 876, 1672
MflI RGATCY 2 cut(s) 497, 1315
MhlI GDGCHC 2 cut(s) 187, 1673
MluCI AATT 9 cut(s) 201, 331, 514, 562, 588, 832, 1474, 1507, 1760
MlyI GAGTC 2 cut(s) 1487, 1652
MmeI TCCRAC 1 cut(s) 841
MnlI CCTC 9 cut(s) 100, 185, 472, 743, 1194, 1400, 1482, 1530, 1707
MroNI GCCGGC 1 cut(s) 597
MroXI GAANNNNTTC 2 cut(s) 975, 1478
MseI TTAA 6 cut(s) 102, 210, 591, 1287, 1325, 1767
MslI CAYNNNNRTG 3 cut(s) 62, 252, 1434
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 4 cut(s) 323, 598, 1244, 1700
MspR9I CCNGG 4 cut(s) 168, 324, 801, 1590
Mva1269I GAATGC 1 cut(s) 1004
MvaI CCWGG 3 cut(s) 168, 801, 1590
MvnI CGCG 1 cut(s) 1757
MwoI GCNNNNNNNGC 2 cut(s) 182, 753
NaeI GCCGGC 1 cut(s) 599
NciI CCSGG 1 cut(s) 324
NcoI CCATGG 1 cut(s) 278
NdeI CATATG 1 cut(s) 1614
NdeII GATC 4 cut(s) 483, 497, 1315, 1516
NgoMIV GCCGGC 1 cut(s) 597
NlaIII CATG 9 cut(s) 145, 257, 282, 386, 621, 859, 1149, 1439, 1635
NlaIV GGNNCC 5 cut(s) 421, 546, 757, 1141, 1411
NmeAIII GCCGAG 1 cut(s) 1510
NmuCI GTSAC 3 cut(s) 301, 392, 1751
NspI RCATGY 2 cut(s) 386, 1149
PaeI GCATGC 1 cut(s) 386
PaeR7I CTCGAG 1 cut(s) 69
PaqCI CACCTGC 1 cut(s) 1440
PciSI GCTCTTC 1 cut(s) 59
PcsI WCGNNNNNNNCGW 1 cut(s) 693
PctI GAATGC 1 cut(s) 1004
PdiI GCCGGC 1 cut(s) 599
PdmI GAANNNNTTC 2 cut(s) 975, 1478
PfeI GAWTC 7 cut(s) 131, 976, 983, 1205, 1417, 1572, 1733
PflMI CCANNNNNTGG 2 cut(s) 249, 1553
PkrI GCNGC 2 cut(s) 577, 1168
PleI GAGTC 2 cut(s) 1487, 1651
PpsI GAGTC 2 cut(s) 1487, 1651
PpuMI RGGWCCY 1 cut(s) 1139
PshAI GACNNNNGTC 2 cut(s) 537, 1343
PshBI ATTAAT 2 cut(s) 591, 1767
Psp124BI GAGCTC 1 cut(s) 187
Psp1406I AACGTT 1 cut(s) 1535
Psp5II RGGWCCY 1 cut(s) 1139
Psp6I CCWGG 3 cut(s) 166, 799, 1588
PspGI CCWGG 3 cut(s) 166, 799, 1588
PspN4I GGNNCC 5 cut(s) 421, 546, 757, 1141, 1411
PspPI GGNCC 4 cut(s) 170, 290, 544, 1139
PspPPI RGGWCCY 1 cut(s) 1139
PspXI VCTCGAGB 1 cut(s) 69
PsrI GAACNNNNNNTAC 2 cut(s) 319, 351
PstNI CAGNNNCTG 1 cut(s) 899
PsuI RGATCY 2 cut(s) 497, 1315
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 2 cut(s) 1094, 1126
RsaNI GTAC 2 cut(s) 1093, 1125
RseI CAYNNNNRTG 3 cut(s) 62, 252, 1434
SacI GAGCTC 1 cut(s) 187
SalI GTCGAC 1 cut(s) 4
SapI GCTCTTC 1 cut(s) 59
SaqAI TTAA 6 cut(s) 102, 210, 591, 1287, 1325, 1767
SatI GCNGC 2 cut(s) 576, 1167
Sau3AI GATC 4 cut(s) 483, 497, 1315, 1516
Sau96I GGNCC 4 cut(s) 170, 290, 544, 1139
SchI GAGTC 2 cut(s) 1487, 1652
ScrFI CCNGG 4 cut(s) 168, 324, 801, 1590
SduI GDGCHC 2 cut(s) 187, 1673
SfaNI GCATC 2 cut(s) 898, 905
SfcI CTRYAG 3 cut(s) 47, 882, 1015
Sfr274I CTCGAG 1 cut(s) 69
SinI GGWCC 3 cut(s) 170, 544, 1139
SlaI CTCGAG 1 cut(s) 69
SmiMI CAYNNNNRTG 3 cut(s) 62, 252, 1434
SmlI CTYRAG 1 cut(s) 69
SmoI CTYRAG 1 cut(s) 69
SphI GCATGC 1 cut(s) 386
Sse9I AATT 9 cut(s) 201, 331, 514, 562, 588, 832, 1474, 1507, 1760
SsiI CCGC 3 cut(s) 1107, 1274, 1757
SspI AATATT 1 cut(s) 1183
SspMI CTAG 4 cut(s) 120, 402, 1313, 1355
SstI GAGCTC 1 cut(s) 187
StyD4I CCNGG 4 cut(s) 166, 322, 799, 1588
StyI CCWWGG 1 cut(s) 278
TaaI ACNGT 7 cut(s) 12, 419, 739, 886, 1124, 1330, 1372
TaiI ACGT 3 cut(s) 638, 819, 1538
TaqI TCGA 4 cut(s) 5, 70, 696, 1731
TasI AATT 9 cut(s) 201, 331, 514, 562, 588, 832, 1474, 1507, 1760
TatI WGTACW 2 cut(s) 1092, 1124
TfiI GAWTC 7 cut(s) 131, 976, 983, 1205, 1417, 1572, 1733
Tru1I TTAA 6 cut(s) 102, 210, 591, 1287, 1325, 1767
Tru9I TTAA 6 cut(s) 102, 210, 591, 1287, 1325, 1767
TscAI CASTG 4 cut(s) 254, 742, 1300, 1326
TseFI GTSAC 3 cut(s) 301, 392, 1751
TseI GCWGC 2 cut(s) 575, 1166
Tsp45I GTSAC 3 cut(s) 301, 392, 1751
TspDTI ATGAA 6 cut(s) 46, 489, 1266, 1284, 1380, 1528
TspGWI ACGGA 1 cut(s) 1402
TspRI CASTG 4 cut(s) 254, 742, 1300, 1326
Van91I CCANNNNNTGG 2 cut(s) 249, 1553
VpaK11BI GGWCC 3 cut(s) 170, 544, 1139
VspI ATTAAT 2 cut(s) 591, 1767
XapI RAATTY 3 cut(s) 331, 514, 832
XceI RCATGY 2 cut(s) 386, 1149
XcmI CCANNNNNNNNNTGG 2 cut(s) 276, 1554
XhoI CTCGAG 1 cut(s) 69
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 2 cut(s) 975, 1478
XspI CTAG 4 cut(s) 120, 402, 1313, 1355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.