Rmu_sc0002923.1_g000026

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002923.1
OG0000320
Physical Location & Seq
Forward (+)
109245 .. 113553
4309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002923.1_g000026.1.cds

Sequence Viewer

Length: 1941 bp
ctgtgttcaacaaagagcatcttggtagtaaacgatagttttccaggtccagagatacgagttcgcaaaggagatacagtttacgttaatgttcataaccaaggatattatggtttcactattcactggcatgggataaaacaaccaagaaatccgtggtcagatggtccagagtacatcacgcagtgtccaattcttcccggaacaaatttcacttatgaaatctctttatccactgaagaaggaactttatggtggcatgctcatagtgattggacaagagccactgttcatggtgccattgtcatcttaccaagtgtaggaaccacatttccatttcctcaaccggatgaagatgagaccattataattgcatcctggtacgagggagatatcaaagaactagttgatgaggctatggatgatggtagcgacttgccccattcagatgcttatacaataaatggcgaaccaggagacttttgtccatgctccagtgaaacaacatatcatcgaatggttgactacggcaagacctatcttcttcgtatagtcaacgcaaacatcaacgcagaacacttctttgcagttgctgaacataatctcaccgttgttggcctagacggagcctatataaaaccgatcgacacaacctacatagtcatcagtgctggacaggcgatggatgtcctcctcaaagcaaaccaatctcctggccaatactatatagctgctagacaatactcaagtgaggatccagaagtgactggctttgaccatgcgaatgttaccgcaatccttgaatacagaggcaactacacatatcagacatctccttcctttccaactactcttcccatgtacttggactatgcagcagcaataaaattcacctcccggattaaaagcttggcgacccccaaataccctacagatgtcccattaaatgttactactaaaatgtttataacggtttctatgaatgatcttccttgttcacatccaggctgtgaaacaactaaacaaatctcttcaagcatgaataatgttagctggattaacccaacaacagatgtccttagagcctactacaggaacataagtggggtttacacaacggattttccagaccaaccgccttcttattataacttcacagaggaaactttcgtggataatattgtgttcactgtccaagggacaaaggtgaagttgttgaattataacgagtcagttcaaattgtgttccaagggactaatgtgatgaagggctctgttaatcatccaatgcatatgcatggatatagcttctacgtggttggatctggttatggaaattatgacgatgaggatgatccaaaggggtttaattttgttgatcctcctaaagtaactacctttggagttcccaaaaatggctggttagcaatcagatttatagcaaataaccctggggtgtggttttggcactgtcattttgatagacacttgagttggggtatgaacactgctttcatagtcaagaatggtggtactgctgagactagcattcgtcgacccccagcttacatgcctccatgtgagcctcacttggattctcgtatcaaaaacagagccttcgctgttcagcacttcagtgtgtgcctggatgaaggtcgtttctgtggagataaggctatgagtgcggatcccgttttctctccggctcaagtagaagcacttgctagagtggaggcgtgcaaatggtgttggaacggggcctctctccggttaggccttctcgttcaggctgtgcactccttggactcctcctccatttacctacgttctctttatggtgatgttcttgctttgtactcttcaaggtgcttgtttcggctattggaagcctttggaaaatactttgctagaatgacccaaggatacaaaggatttctatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

646

Amino Acids

72.47

Weight (kDa)

5.58

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 368, 968, 1149, 1224
AccB1I GGYRCC 1 cut(s) 296
AccI GTMKAC 1 cut(s) 1555
AciI CCGC 3 cut(s) 792, 1136, 1685
AclWI GGATC 7 cut(s) 749, 762, 1330, 1349, 1373, 1682, 1695
AcoI YGGCCR 1 cut(s) 715
AcsI RAATTY 2 cut(s) 208, 887
AcuI CTGAAG 2 cut(s) 258, 1618
AdeI CACNNNGTG 1 cut(s) 186
AfaI GTAC 5 cut(s) 176, 383, 863, 1534, 1856
AfiI CCNNNNNNNGG 4 cut(s) 320, 1092, 1415, 1767
AgsI TTSAA 6 cut(s) 9, 803, 1035, 1219, 1238, 1863
AhlI ACTAGT 1 cut(s) 403
AjnI CCWGG 7 cut(s) 43, 377, 472, 712, 1003, 1450, 1644
AleI CACNNNNGTG 1 cut(s) 1635
AloI GAACNNNNNNTCC 2 cut(s) 316, 348
AluBI AGCT 5 cut(s) 731, 909, 1053, 1308, 1565
AluI AGCT 5 cut(s) 731, 909, 1053, 1308, 1565
Alw21I GWGCWC 1 cut(s) 1797
Alw26I GTCTC 3 cut(s) 353, 471, 1535
Alw44I GTGCAC 1 cut(s) 1793
AlwI GGATC 7 cut(s) 749, 762, 1330, 1349, 1373, 1682, 1695
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 4 cut(s) 616, 715, 1758, 1774
ApaLI GTGCAC 1 cut(s) 1793
ApeKI GCWGC 3 cut(s) 731, 875, 878
ApoI RAATTY 2 cut(s) 208, 887
AspS9I GGNCC 3 cut(s) 47, 167, 1758
AsuC2I CCSGG 2 cut(s) 201, 898
AsuHPI GGTGA 4 cut(s) 598, 883, 1219, 1850
AvaII GGWCC 2 cut(s) 47, 167
BaeGI GKGCMC 1 cut(s) 1797
BalI TGGCCA 1 cut(s) 717
BamHI GGATCC 2 cut(s) 754, 1687
BanI GGYRCC 1 cut(s) 296
BanII GRGCYC 1 cut(s) 1274
Bbv12I GWGCWC 1 cut(s) 1797
BbvI GCAGC 3 cut(s) 718, 887, 890
BccI CCATC 3 cut(s) 158, 419, 676
BceAI ACGGC 1 cut(s) 544
BciT130I CCWGG 7 cut(s) 45, 379, 474, 714, 1005, 1452, 1646
BciVI GTATCC 1 cut(s) 1916
BcnI CCSGG 2 cut(s) 201, 898
BcoDI GTCTC 3 cut(s) 353, 471, 1535
BcuI ACTAGT 1 cut(s) 403
BfaI CTAG 6 cut(s) 404, 620, 735, 1545, 1725, 1908
BfmI CTRYAG 2 cut(s) 930, 1090
BfuI GTATCC 1 cut(s) 1916
BisI GCNGC 3 cut(s) 732, 876, 879
BlsI GCNGC 3 cut(s) 733, 877, 880
Bme1390I CCNGG 9 cut(s) 45, 201, 379, 474, 714, 898, 1005, 1452, 1646
Bme18I GGWCC 2 cut(s) 47, 167
BmgT120I GGNCC 3 cut(s) 47, 167, 1758
BmiI GGNNCC 6 cut(s) 298, 325, 628, 756, 1689, 1759
BmrFI CCNGG 9 cut(s) 45, 201, 379, 474, 714, 898, 1005, 1452, 1646
BmsI GCATC 3 cut(s) 27, 383, 439
BoxI GACNNNNGTC 1 cut(s) 483
BpmI CTGGAG 1 cut(s) 478
BpuEI CTTGAG 3 cut(s) 730, 1510, 1692
BpuMI CCSGG 2 cut(s) 201, 898
BsaAI YACGTR 1 cut(s) 1315
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 8 cut(s) 100, 155, 1195, 1249, 1450, 1451, 1800, 1918
BsaWI WCCGGW 2 cut(s) 346, 1767
BsaXI ACNNNNNCTCC 4 cut(s) 63, 93, 1796, 1826
Bsc4I CCNNNNNNNGG 4 cut(s) 320, 1092, 1415, 1767
Bse1I ACTGG 3 cut(s) 131, 495, 772
BseBI CCWGG 7 cut(s) 45, 379, 474, 714, 1005, 1452, 1646
BseDI CCNNGG 8 cut(s) 100, 155, 1195, 1249, 1450, 1451, 1800, 1918
BseGI GGATG 8 cut(s) 355, 374, 427, 691, 1000, 1282, 1357, 1654
BseLI CCNNNNNNNGG 4 cut(s) 320, 1092, 1415, 1767
BseMII CTCAG 1 cut(s) 1530
BseNI ACTGG 3 cut(s) 131, 495, 772
BseRI GAGGAG 3 cut(s) 683, 1798, 1801
BseSI GKGCMC 1 cut(s) 1797
BseXI GCAGC 3 cut(s) 718, 887, 890
BseYI CCCAGC 1 cut(s) 1561
Bsh1285I CGRYCG 1 cut(s) 645
BshFI GGCC 4 cut(s) 618, 717, 1760, 1776
BshNI GGYRCC 1 cut(s) 296
BsiEI CGRYCG 1 cut(s) 645
BsiHKAI GWGCWC 1 cut(s) 1797
BsiSI CCGG 5 cut(s) 201, 347, 898, 1703, 1768
BslFI GGGAC 3 cut(s) 923, 1213, 1267
BslI CCNNNNNNNGG 4 cut(s) 320, 1092, 1415, 1767
BsmAI GTCTC 3 cut(s) 353, 471, 1535
BsmFI GGGAC 3 cut(s) 923, 1213, 1267
BsmI GAATGC 1 cut(s) 1548
BsnI GGCC 4 cut(s) 618, 717, 1760, 1776
Bso31I GGTCTC 1 cut(s) 353
Bsp1286I GDGCHC 2 cut(s) 1274, 1797
Bsp143I GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
BspACI CCGC 3 cut(s) 792, 1136, 1685
BspANI GGCC 4 cut(s) 618, 717, 1760, 1776
BspCNI CTCAG 1 cut(s) 1531
BspLI GGNNCC 6 cut(s) 298, 325, 628, 756, 1689, 1759
BspPI GGATC 7 cut(s) 749, 762, 1330, 1349, 1373, 1682, 1695
BspT107I GGYRCC 1 cut(s) 296
BspTNI GGTCTC 1 cut(s) 353
BsrI ACTGG 3 cut(s) 131, 495, 772
BssECI CCNNGG 8 cut(s) 100, 155, 1195, 1249, 1450, 1451, 1800, 1918
BssMI GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
BssT1I CCWWGG 5 cut(s) 100, 1195, 1249, 1800, 1918
Bst2UI CCWGG 7 cut(s) 45, 379, 474, 714, 1005, 1452, 1646
Bst4CI ACNGT 6 cut(s) 79, 289, 610, 973, 1192, 1472
Bst6I CTCTTC 3 cut(s) 858, 1036, 1864
BstBAI YACGTR 1 cut(s) 1315
BstC8I GCNNGC 2 cut(s) 261, 1738
BstDEI CTNAG 2 cut(s) 1079, 1539
BstDSI CCRYGG 1 cut(s) 155
BstENI CCTNNNNNAGG 1 cut(s) 1090
BstF5I GGATG 8 cut(s) 355, 374, 427, 691, 1000, 1282, 1357, 1654
BstKTI GATC 7 cut(s) 645, 757, 988, 1325, 1357, 1381, 1690
BstMAI GTCTC 3 cut(s) 353, 471, 1535
BstMBI GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
BstMCI CGRYCG 1 cut(s) 645
BstMWI GCNNNNNNNGC 2 cut(s) 677, 1682
BstNI CCWGG 7 cut(s) 45, 379, 474, 714, 1005, 1452, 1646
BstNSI RCATGY 2 cut(s) 263, 1573
BstPAI GACNNNNGTC 1 cut(s) 483
BstSCI CCNGG 9 cut(s) 43, 199, 377, 472, 712, 896, 1003, 1450, 1644
BstSFI CTRYAG 2 cut(s) 930, 1090
BstSLI GKGCMC 1 cut(s) 1797
BstV1I GCAGC 3 cut(s) 718, 887, 890
BstX2I RGATCY 3 cut(s) 754, 1322, 1687
BstXI CCANNNNNNTGG 2 cut(s) 713, 865
BstYI RGATCY 3 cut(s) 754, 1322, 1687
BsuI GTATCC 1 cut(s) 1916
BsuRI GGCC 4 cut(s) 618, 717, 1760, 1776
BtgI CCRYGG 1 cut(s) 155
BtgZI GCGATG 1 cut(s) 695
BtsCI GGATG 8 cut(s) 355, 374, 427, 691, 1000, 1282, 1357, 1654
BtsI GCAGTG 2 cut(s) 191, 1506
Cac8I GCNNGC 2 cut(s) 261, 1738
CaiI CAGNNNCTG 1 cut(s) 593
Cfr13I GGNCC 3 cut(s) 47, 167, 1758
Csp6I GTAC 5 cut(s) 175, 382, 862, 1533, 1855
CspCI CAANNNNNGTGG 2 cut(s) 1510, 1545
CviQI GTAC 5 cut(s) 175, 382, 862, 1533, 1855
DdeI CTNAG 2 cut(s) 1079, 1539
DpnI GATC 7 cut(s) 644, 756, 987, 1324, 1356, 1380, 1689
DpnII GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
DraIII CACNNNGTG 1 cut(s) 186
EaeI YGGCCR 1 cut(s) 715
Eam1104I CTCTTC 3 cut(s) 858, 1036, 1864
EarI CTCTTC 3 cut(s) 858, 1036, 1864
Eco130I CCWWGG 5 cut(s) 100, 1195, 1249, 1800, 1918
Eco147I AGGCCT 1 cut(s) 1776
Eco24I GRGCYC 1 cut(s) 1274
Eco31I GGTCTC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 2 cut(s) 47, 167
Eco57I CTGAAG 2 cut(s) 258, 1618
EcoNI CCTNNNNNAGG 1 cut(s) 1090
EcoO109I RGGNCCY 1 cut(s) 1758
EcoRII CCWGG 7 cut(s) 43, 377, 472, 712, 1003, 1450, 1644
EcoRV GATATC 1 cut(s) 394
EcoT14I CCWWGG 5 cut(s) 100, 1195, 1249, 1800, 1918
EcoT22I ATGCAT 2 cut(s) 1293, 1299
EcoT38I GRGCYC 1 cut(s) 1274
ErhI CCWWGG 5 cut(s) 100, 1195, 1249, 1800, 1918
FalI AAGNNNNNCTT 1 cut(s) 37
FaqI GGGAC 3 cut(s) 923, 1213, 1267
FauNDI CATATG 1 cut(s) 1293
FblI GTMKAC 1 cut(s) 1555
Fnu4HI GCNGC 3 cut(s) 732, 876, 879
FokI GGATG 8 cut(s) 361, 362, 434, 698, 987, 1269, 1364, 1661
FriOI GRGCYC 1 cut(s) 1274
Fsp4HI GCNGC 3 cut(s) 732, 876, 879
FspBI CTAG 6 cut(s) 404, 620, 735, 1545, 1725, 1908
GluI GCNGC 3 cut(s) 732, 876, 879
GsaI CCCAGC 1 cut(s) 1565
GsuI CTGGAG 1 cut(s) 478
HaeIII GGCC 4 cut(s) 618, 717, 1760, 1776
HapII CCGG 5 cut(s) 201, 347, 898, 1703, 1768
HincII GTYRAC 3 cut(s) 523, 556, 1556
HindII GTYRAC 3 cut(s) 523, 556, 1556
HindIII AAGCTT 1 cut(s) 907
HinfI GANTC 3 cut(s) 1229, 1595, 1805
HpaII CCGG 5 cut(s) 201, 347, 898, 1703, 1768
HphI GGTGA 4 cut(s) 598, 883, 1219, 1850
Hpy166II GTNNAC 9 cut(s) 31, 82, 523, 556, 998, 1111, 1188, 1556, 1795
Hpy188I TCNGA 4 cut(s) 163, 448, 828, 1433
Hpy188III TCNNGA 5 cut(s) 50, 170, 758, 1127, 1522
Hpy8I GTNNAC 9 cut(s) 31, 82, 523, 556, 998, 1111, 1188, 1556, 1795
Hpy99I CGWCG 1 cut(s) 1557
HpyAV CCTTC 7 cut(s) 236, 846, 1149, 1261, 1627, 1646, 1787
HpyCH4III ACNGT 6 cut(s) 79, 289, 610, 973, 1192, 1472
HpyCH4IV ACGT 3 cut(s) 84, 1314, 1825
HpyCH4V TGCA 7 cut(s) 374, 587, 875, 1291, 1297, 1740, 1795
HpyF10VI GCNNNNNNNGC 2 cut(s) 677, 1682
HpyF3I CTNAG 2 cut(s) 1079, 1539
HpySE526I ACGT 3 cut(s) 84, 1314, 1825
Kzo9I GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
LmnI GCTCC 2 cut(s) 497, 626
Lsp1109I GCAGC 3 cut(s) 718, 887, 890
LweI GCATC 3 cut(s) 27, 383, 439
MaeI CTAG 6 cut(s) 404, 620, 735, 1545, 1725, 1908
MaeII ACGT 3 cut(s) 84, 1314, 1825
MaeIII GTNAC 4 cut(s) 763, 787, 949, 1390
MalI GATC 7 cut(s) 644, 756, 987, 1324, 1356, 1380, 1689
MboI GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
MboII GAAGA 9 cut(s) 188, 251, 365, 533, 536, 845, 980, 1023, 1851
MflI RGATCY 3 cut(s) 754, 1322, 1687
MhlI GDGCHC 2 cut(s) 1274, 1797
MlsI TGGCCA 1 cut(s) 717
MluCI AATT 8 cut(s) 192, 208, 369, 887, 1219, 1239, 1336, 1369
MluNI TGGCCA 1 cut(s) 717
MlyI GAGTC 2 cut(s) 1238, 1799
MmeI TCCRAC 3 cut(s) 869, 1300, 1730
Mox20I TGGCCA 1 cut(s) 717
Mph1103I ATGCAT 2 cut(s) 1293, 1299
MscI TGGCCA 1 cut(s) 717
MseI TTAA 6 cut(s) 87, 903, 944, 1059, 1278, 1368
MslI CAYNNNNRTG 5 cut(s) 129, 447, 783, 1296, 1635
Msp20I TGGCCA 1 cut(s) 717
MspI CCGG 5 cut(s) 201, 347, 898, 1703, 1768
MspR9I CCNGG 9 cut(s) 45, 201, 379, 474, 714, 898, 1005, 1452, 1646
Mva1269I GAATGC 1 cut(s) 1548
MvaI CCWGG 7 cut(s) 45, 379, 474, 714, 1005, 1452, 1646
MwoI GCNNNNNNNGC 2 cut(s) 677, 1682
NciI CCSGG 2 cut(s) 201, 898
NdeI CATATG 1 cut(s) 1293
NdeII GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
NlaIV GGNNCC 6 cut(s) 298, 325, 628, 756, 1689, 1759
NmuCI GTSAC 1 cut(s) 763
NsiI ATGCAT 2 cut(s) 1293, 1299
NspI RCATGY 2 cut(s) 263, 1573
OliI CACNNNNGTG 1 cut(s) 1635
PaeI GCATGC 1 cut(s) 263
PasI CCCWGGG 1 cut(s) 1451
PceI AGGCCT 1 cut(s) 1776
PctI GAATGC 1 cut(s) 1548
PfeI GAWTC 1 cut(s) 1595
PfoI TCCNGGA 2 cut(s) 199, 896
PkrI GCNGC 3 cut(s) 733, 877, 880
Ple19I CGATCG 1 cut(s) 645
PleI GAGTC 2 cut(s) 1237, 1799
PpsI GAGTC 2 cut(s) 1237, 1799
Ppu21I YACGTR 1 cut(s) 1315
PshAI GACNNNNGTC 1 cut(s) 483
PsiI TTATAA 4 cut(s) 368, 968, 1149, 1224
Psp6I CCWGG 7 cut(s) 43, 377, 472, 712, 1003, 1450, 1644
PspFI CCCAGC 1 cut(s) 1561
PspGI CCWGG 7 cut(s) 43, 377, 472, 712, 1003, 1450, 1644
PspN4I GGNNCC 6 cut(s) 298, 325, 628, 756, 1689, 1759
PspPI GGNCC 3 cut(s) 47, 167, 1758
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 3 cut(s) 754, 1322, 1687
PvuI CGATCG 1 cut(s) 645
RsaI GTAC 5 cut(s) 176, 383, 863, 1534, 1856
RsaNI GTAC 5 cut(s) 175, 382, 862, 1533, 1855
RseI CAYNNNNRTG 5 cut(s) 129, 447, 783, 1296, 1635
SalI GTCGAC 1 cut(s) 1554
SaqAI TTAA 6 cut(s) 87, 903, 944, 1059, 1278, 1368
SatI GCNGC 3 cut(s) 732, 876, 879
Sau3AI GATC 7 cut(s) 642, 754, 985, 1322, 1354, 1378, 1687
Sau96I GGNCC 3 cut(s) 47, 167, 1758
SchI GAGTC 2 cut(s) 1238, 1799
ScrFI CCNGG 9 cut(s) 45, 201, 379, 474, 714, 898, 1005, 1452, 1646
SduI GDGCHC 2 cut(s) 1274, 1797
SfaNI GCATC 3 cut(s) 27, 383, 439
SfcI CTRYAG 2 cut(s) 930, 1090
SinI GGWCC 2 cut(s) 47, 167
SmiMI CAYNNNNRTG 5 cut(s) 129, 447, 783, 1296, 1635
SmlI CTYRAG 3 cut(s) 745, 1489, 1707
SmoI CTYRAG 3 cut(s) 745, 1489, 1707
SpeI ACTAGT 1 cut(s) 403
SphI GCATGC 1 cut(s) 263
Sse9I AATT 8 cut(s) 192, 208, 369, 887, 1219, 1239, 1336, 1369
SseBI AGGCCT 1 cut(s) 1776
SsiI CCGC 3 cut(s) 792, 1136, 1685
SspI AATATT 1 cut(s) 1180
SspMI CTAG 6 cut(s) 404, 620, 735, 1545, 1725, 1908
StuI AGGCCT 1 cut(s) 1776
StyD4I CCNGG 9 cut(s) 43, 199, 377, 472, 712, 896, 1003, 1450, 1644
StyI CCWWGG 5 cut(s) 100, 1195, 1249, 1800, 1918
TaaI ACNGT 6 cut(s) 79, 289, 610, 973, 1192, 1472
TaiI ACGT 3 cut(s) 87, 1317, 1828
TaqI TCGA 3 cut(s) 514, 645, 1555
TasI AATT 8 cut(s) 192, 208, 369, 887, 1219, 1239, 1336, 1369
TatI WGTACW 3 cut(s) 174, 861, 1854
TfiI GAWTC 1 cut(s) 1595
Tru1I TTAA 6 cut(s) 87, 903, 944, 1059, 1278, 1368
Tru9I TTAA 6 cut(s) 87, 903, 944, 1059, 1278, 1368
TseFI GTSAC 1 cut(s) 763
TseI GCWGC 3 cut(s) 731, 875, 878
Tsp45I GTSAC 1 cut(s) 763
TspGWI ACGGA 3 cut(s) 144, 639, 1133
VneI GTGCAC 1 cut(s) 1793
VpaK11BI GGWCC 2 cut(s) 47, 167
XagI CCTNNNNNAGG 1 cut(s) 1090
XapI RAATTY 2 cut(s) 208, 887
XceI RCATGY 2 cut(s) 263, 1573
XcmI CCANNNNNNNNNTGG 2 cut(s) 107, 153
XmiI GTMKAC 1 cut(s) 1555
XspI CTAG 6 cut(s) 404, 620, 735, 1545, 1725, 1908
Zsp2I ATGCAT 2 cut(s) 1293, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.