Rh6DG183900

Belongs to the multicopper oxidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000320
Physical Location & Seq
Forward (+)
32777213 .. 32785355
8143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG183900.1

Sequence Viewer

Length: 1890 bp
ATGCAACCCTACAGTTTCATATATCATATTATATATATTGTCCCAGCTAGGAACCCAAAACATGAAAGGAAAGCTAATTGGCGTTTTCTTCAGCCAAGAAATAACAGCATGAAACCCCAAATGAACTGTCGATTGTTGATGACAGAAGTTCTGGGGTTTCTCTTTGTTTTTGTGCAGTTTGACTCTCTGGTTCAAGGCGAAGTGCATTTCTATGCTTTTGTTGTAAGGGAGAGAAACTTCACCAAACTCTGTGTAACGAAGAGCATTTTAGTAGTAAATGACAGTTTTCCAGGTCCGGAGATACGAGTTCACAAAGGAGATACAGTTTTCGTTAATGTTCATAACCAAGGATATTATGGTTTCACTATTCACTGGCATGGAATAAAGCAACCAAGAAATCCTTGGTCAGATGGTCCAGAGTACATTACGCAGTGTCCAATCCCTCCTGGAACAAATTTCACATATGAAATCCACTTATCCGATGAGGAAGGGACTTTATGGTGGCATGCTCATAGTGACTGGACAAGAGCCACAGTTCATGGTGCCATTGTCATCTTGCCCGCTGTTGGAACAACATTTCCATTCCCTCAACCGGATGATGATGAGACCATTATAATTGCATCCTGGTACTTTGGAGATGTGAAAGAACTTGTGGATGTGGCTATGGAAGAAGGTAGCGACTTGCCCCATTCAGATGCTTATACTATAAATGGTGAACCAGGAGATCTTTGTAATTGCTCTAAAGAAACAACGTACCGTCGAATGGTGGACTACGGAAAGACCTATCTGCTCCGTATAATCAATGCAAATATTAATGCAGAACATTTCTTTGCGGTTGGTGACCACAACCTCACTGTGGTTGGACTAGATGGAGCCTATATAAAACCCATAAACACAGGTTACCTAGTTATAAGCCCTGGACAAGCGATGGATGTCCTCCTTGAAGCAAATCAATCCCCTGGTCAATACTATATGGCTGCTAGACAATACTCGAGTGAGGATGCAGCAGTCGTGGACTTCGACCACGTCAATGTTACTGCAATCCTAGAATATAGAGGCAACTATACATATCGACCTCCTTCCTTTCCAACTACTCTTCCAATGTACTTGGACTATCCAGCAGCAGTAAAATTCACTTTACGAATTAAGAGCTTGGCGACTCCAGAATACCCTATAAGTGTCCCACTAAACGTTACTACTTCAATGTTCATAACCGTTTCCATGAATGAACTTCCTTGTACTCATTCAGGCTGTAAAACGGATCAGAAAATGACTTCAAGCTTGAATAATGTTAGCTGGGCGTTCCCACTCAATACCACAGACGTTCTTCAAGCCTACTACAGGAACATAAGCGGGGTTTACACGACAGATTTTCCAGACCAGCCAACTCAATATTATAACTTCACAGAGGAAACTTTTGTGGAAAATATTTTGTTCACTGTACAAGGGACGAAGGTGAAGGTGCTAAATTATAACGAGTCAGTTCAGATTGTGTTTCTAGGGACCGATGTGATGAAAAGCTCTGTTAATCATCCAATGCATATGCATGGATACAGTTTCTACGTGGTTGGCTTTGGTTTTGGAATTTATAACAATGAGAGTGATCCAAAAGGATTTAATTTGGTTGATCCTCCTCAAGCAACTACGTTTGGAGTTCCCAAAAATGGTTGGTTAGCAATTAGATTTACAGCAAATAATCCCGGGGTATGGTTTTGGCATTGTCATTTTGAGAGACATTTGAGTTGGGGAATGGACACTGCTTTCATAGTCAAAAACGGTGGCACCGTTCAGACTAGCATGCGCGAACCCCCAGCTTATATGCCTCCATGTAATGCTCAATTGGATTCTCATATCAAAACCGATTCAACAGAAGGAGTAAATATAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

629

Amino Acids

71.37

Weight (kDa)

5.66

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 75 - 187 2.4e-40 Multicopper oxidase
Cu-oxidase PF00394 202 - 354 1.5e-37 Multicopper oxidase
Cu-oxidase_2 PF07731 460 - 592 9.3e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 614, 911, 1398, 1473, 1590
AccB1I GGYRCC 2 cut(s) 542, 1781
AccII CGCG 1 cut(s) 1803
AccIII TCCGGA 1 cut(s) 295
AciI CCGC 3 cut(s) 561, 833, 1353
AclI AACGTT 1 cut(s) 1191
AclWI GGATC 3 cut(s) 1269, 1598, 1622
AcsI RAATTY 3 cut(s) 454, 1130, 1584
AcuI CTGAAG 1 cut(s) 74
AfaI GTAC 6 cut(s) 422, 629, 755, 1106, 1240, 1443
AfiI CCNNNNNNNGG 7 cut(s) 566, 592, 763, 856, 1341, 1664, 1707
AgsI TTSAA 7 cut(s) 194, 944, 1203, 1278, 1285, 1331, 1866
AjiI CACGTC 1 cut(s) 1027
AjnI CCWGG 6 cut(s) 289, 445, 623, 718, 916, 958
AloI GAACNNNNNNTCC 2 cut(s) 562, 594
AluBI AGCT 7 cut(s) 47, 74, 1152, 1281, 1296, 1521, 1814
AluI AGCT 7 cut(s) 47, 74, 1152, 1281, 1296, 1521, 1814
Alw26I GTCTC 2 cut(s) 599, 1726
AlwI GGATC 3 cut(s) 1269, 1598, 1622
Ama87I CYCGRG 2 cut(s) 991, 1700
Aor13HI TCCGGA 1 cut(s) 295
ApeKI GCWGC 3 cut(s) 977, 1004, 1121
ApoI RAATTY 3 cut(s) 454, 1130, 1584
ArsI GACNNNNNNTTYG 2 cut(s) 112, 144
AseI ATTAAT 1 cut(s) 813
AspLEI GCGC 1 cut(s) 1803
AspS9I GGNCC 3 cut(s) 293, 413, 1503
AsuC2I CCSGG 2 cut(s) 1701, 1702
AsuHPI GGTGA 4 cut(s) 232, 725, 851, 1468
AvaI CYCGRG 2 cut(s) 991, 1700
AvaII GGWCC 3 cut(s) 293, 413, 1503
BanI GGYRCC 2 cut(s) 542, 1781
BbvI GCAGC 3 cut(s) 964, 1016, 1133
BccI CCATC 3 cut(s) 404, 863, 922
BciT130I CCWGG 6 cut(s) 291, 447, 625, 720, 918, 960
BciVI GTATCC 1 cut(s) 1544
BcnI CCSGG 2 cut(s) 1701, 1702
BcoDI GTCTC 2 cut(s) 599, 1726
BfaI CTAG 7 cut(s) 48, 866, 905, 981, 1046, 1499, 1794
BfmI CTRYAG 2 cut(s) 10, 1339
BfuI GTATCC 1 cut(s) 1544
BglII AGATCT 1 cut(s) 724
BisI GCNGC 3 cut(s) 978, 1005, 1122
BlsI GCNGC 3 cut(s) 979, 1006, 1123
Bme1390I CCNGG 8 cut(s) 291, 447, 625, 720, 918, 960, 1701, 1702
Bme18I GGWCC 3 cut(s) 293, 413, 1503
BmeT110I CYCGRG 2 cut(s) 991, 1700
BmgBI CACGTC 1 cut(s) 1027
BmgT120I GGNCC 3 cut(s) 293, 413, 1503
BmiI GGNNCC 5 cut(s) 53, 544, 874, 1504, 1783
BmrFI CCNGG 8 cut(s) 291, 447, 625, 720, 918, 960, 1701, 1702
BmsI GCATC 3 cut(s) 629, 685, 991
BpmI CTGGAG 1 cut(s) 1146
BpuEI CTTGAG 1 cut(s) 1620
BpuMI CCSGG 2 cut(s) 1701, 1702
BsaAI YACGTR 1 cut(s) 1564
BsaI GGTCTC 1 cut(s) 599
BsaJI CCNNGG 6 cut(s) 346, 401, 916, 958, 1700, 1701
BsaWI WCCGGW 2 cut(s) 295, 592
BsaXI ACNNNNNCTCC 2 cut(s) 309, 339
Bsc4I CCNNNNNNNGG 7 cut(s) 566, 592, 763, 856, 1341, 1664, 1707
Bse1I ACTGG 2 cut(s) 377, 524
BseAI TCCGGA 1 cut(s) 295
BseBI CCWGG 6 cut(s) 291, 447, 625, 720, 918, 960
BseDI CCNNGG 6 cut(s) 346, 401, 916, 958, 1700, 1701
BseGI GGATG 6 cut(s) 601, 620, 661, 937, 1006, 1531
BseLI CCNNNNNNNGG 7 cut(s) 566, 592, 763, 856, 1341, 1664, 1707
BseNI ACTGG 2 cut(s) 377, 524
BseRI GAGGAG 1 cut(s) 1623
BseXI GCAGC 3 cut(s) 964, 1016, 1133
BseYI CCCAGC 3 cut(s) 43, 1296, 1810
BsgI GTGCAG 1 cut(s) 194
Bsh1236I CGCG 1 cut(s) 1803
BshNI GGYRCC 2 cut(s) 542, 1781
BsiHKCI CYCGRG 2 cut(s) 991, 1700
BsiSI CCGG 3 cut(s) 296, 593, 1701
BslFI GGGAC 5 cut(s) 26, 505, 1166, 1462, 1516
BslI CCNNNNNNNGG 7 cut(s) 566, 592, 763, 856, 1341, 1664, 1707
BsmAI GTCTC 2 cut(s) 599, 1726
BsmFI GGGAC 5 cut(s) 26, 505, 1166, 1462, 1516
Bso31I GGTCTC 1 cut(s) 599
BsoBI CYCGRG 2 cut(s) 991, 1700
Bsp13I TCCGGA 1 cut(s) 295
Bsp1407I TGTACA 1 cut(s) 1441
Bsp143I GATC 4 cut(s) 724, 1261, 1603, 1627
BspACI CCGC 3 cut(s) 561, 833, 1353
BspEI TCCGGA 1 cut(s) 295
BspFNI CGCG 1 cut(s) 1803
BspLI GGNNCC 5 cut(s) 53, 544, 874, 1504, 1783
BspPI GGATC 3 cut(s) 1269, 1598, 1622
BspQI GCTCTTC 1 cut(s) 254
BspT107I GGYRCC 2 cut(s) 542, 1781
BspTNI GGTCTC 1 cut(s) 599
BsrGI TGTACA 1 cut(s) 1441
BsrI ACTGG 2 cut(s) 377, 524
BssECI CCNNGG 6 cut(s) 346, 401, 916, 958, 1700, 1701
BssMI GATC 4 cut(s) 724, 1261, 1603, 1627
BssT1I CCWWGG 2 cut(s) 346, 401
Bst2UI CCWGG 6 cut(s) 291, 447, 625, 720, 918, 960
Bst6I CTCTTC 2 cut(s) 254, 1101
BstAUI TGTACA 1 cut(s) 1441
BstBAI YACGTR 1 cut(s) 1564
BstC8I GCNNGC 3 cut(s) 507, 561, 1799
BstEII GGTNACC 2 cut(s) 839, 899
BstENI CCTNNNNNAGG 1 cut(s) 1339
BstF5I GGATG 6 cut(s) 601, 620, 661, 937, 1006, 1531
BstFNI CGCG 1 cut(s) 1803
BstHHI GCGC 1 cut(s) 1803
BstKTI GATC 4 cut(s) 727, 1264, 1606, 1630
BstMAI GTCTC 2 cut(s) 599, 1726
BstMBI GATC 4 cut(s) 724, 1261, 1603, 1627
BstNI CCWGG 6 cut(s) 291, 447, 625, 720, 918, 960
BstNSI RCATGY 2 cut(s) 509, 1801
BstPI GGTNACC 2 cut(s) 839, 899
BstSCI CCNGG 8 cut(s) 289, 445, 623, 718, 916, 958, 1699, 1700
BstSFI CTRYAG 2 cut(s) 10, 1339
BstUI CGCG 1 cut(s) 1803
BstV1I GCAGC 3 cut(s) 964, 1016, 1133
BstX2I RGATCY 1 cut(s) 724
BstYI RGATCY 1 cut(s) 724
BsuI GTATCC 1 cut(s) 1544
BtgZI GCGATG 1 cut(s) 941
BtrI CACGTC 1 cut(s) 1027
BtsCI GGATG 6 cut(s) 601, 620, 661, 937, 1006, 1531
BtsI GCAGTG 2 cut(s) 437, 1755
BtsIMutI CAGTG 5 cut(s) 370, 437, 852, 1437, 1755
Cac8I GCNNGC 3 cut(s) 507, 561, 1799
CfoI GCGC 1 cut(s) 1803
Cfr13I GGNCC 3 cut(s) 293, 413, 1503
Cfr9I CCCGGG 1 cut(s) 1700
Csp6I GTAC 6 cut(s) 421, 628, 754, 1105, 1239, 1442
CspCI CAANNNNNGTGG 2 cut(s) 1759, 1794
CviAII CATG 9 cut(s) 62, 109, 377, 506, 539, 1222, 1547, 1798, 1827
CviQI GTAC 6 cut(s) 421, 628, 754, 1105, 1239, 1442
DpnI GATC 4 cut(s) 726, 1263, 1605, 1629
DpnII GATC 4 cut(s) 724, 1261, 1603, 1627
Eam1104I CTCTTC 2 cut(s) 254, 1101
EarI CTCTTC 2 cut(s) 254, 1101
Eco130I CCWWGG 2 cut(s) 346, 401
Eco31I GGTCTC 1 cut(s) 599
Eco47I GGWCC 3 cut(s) 293, 413, 1503
Eco57I CTGAAG 1 cut(s) 74
Eco88I CYCGRG 2 cut(s) 991, 1700
Eco91I GGTNACC 2 cut(s) 839, 899
EcoNI CCTNNNNNAGG 1 cut(s) 1339
EcoO65I GGTNACC 2 cut(s) 839, 899
EcoRII CCWGG 6 cut(s) 289, 445, 623, 718, 916, 958
EcoT14I CCWWGG 2 cut(s) 346, 401
EcoT22I ATGCAT 2 cut(s) 1542, 1548
ErhI CCWWGG 2 cut(s) 346, 401
FaeI CATG 9 cut(s) 65, 112, 380, 509, 542, 1225, 1550, 1801, 1830
FalI AAGNNNNNCTT 2 cut(s) 385, 417
FaqI GGGAC 5 cut(s) 26, 505, 1166, 1462, 1516
FatI CATG 9 cut(s) 61, 108, 376, 505, 538, 1221, 1546, 1797, 1826
FauI CCCGC 2 cut(s) 568, 1346
FauNDI CATATG 2 cut(s) 463, 1542
Fnu4HI GCNGC 3 cut(s) 978, 1005, 1122
FokI GGATG 6 cut(s) 607, 608, 668, 944, 1013, 1518
Fsp4HI GCNGC 3 cut(s) 978, 1005, 1122
FspBI CTAG 7 cut(s) 48, 866, 905, 981, 1046, 1499, 1794
GlaI GCGC 1 cut(s) 1802
GluI GCNGC 3 cut(s) 978, 1005, 1122
GsaI CCCAGC 3 cut(s) 47, 1300, 1814
GsuI CTGGAG 1 cut(s) 1146
HapII CCGG 3 cut(s) 296, 593, 1701
HhaI GCGC 1 cut(s) 1803
Hin1II CATG 9 cut(s) 65, 112, 380, 509, 542, 1225, 1550, 1801, 1830
Hin6I GCGC 1 cut(s) 1801
HinP1I GCGC 1 cut(s) 1801
HindIII AAGCTT 1 cut(s) 1279
HinfI GANTC 5 cut(s) 182, 1159, 1478, 1844, 1862
HpaII CCGG 3 cut(s) 296, 593, 1701
HphI GGTGA 4 cut(s) 232, 725, 851, 1468
Hpy166II GTNNAC 6 cut(s) 310, 716, 769, 1015, 1360, 1437
Hpy188I TCNGA 7 cut(s) 409, 481, 694, 1266, 1488, 1791, 1889
Hpy188III TCNNGA 4 cut(s) 296, 416, 1163, 1376
Hpy8I GTNNAC 6 cut(s) 310, 716, 769, 1015, 1360, 1437
Hpy99I CGWCG 1 cut(s) 762
HpyAV CCTTC 6 cut(s) 482, 665, 1089, 1447, 1453, 1865
HpyCH4IV ACGT 6 cut(s) 752, 1026, 1191, 1323, 1563, 1646
HpySE526I ACGT 6 cut(s) 752, 1026, 1191, 1323, 1563, 1646
Hsp92II CATG 9 cut(s) 65, 112, 380, 509, 542, 1225, 1550, 1801, 1830
HspAI GCGC 1 cut(s) 1801
Kpn2I TCCGGA 1 cut(s) 295
Kzo9I GATC 4 cut(s) 724, 1261, 1603, 1627
LguI GCTCTTC 1 cut(s) 254
LmnI GCTCC 2 cut(s) 795, 872
Lsp1109I GCAGC 3 cut(s) 964, 1016, 1133
LweI GCATC 3 cut(s) 629, 685, 991
MaeI CTAG 7 cut(s) 48, 866, 905, 981, 1046, 1499, 1794
MaeII ACGT 6 cut(s) 752, 1026, 1191, 1323, 1563, 1646
MaeIII GTNAC 6 cut(s) 253, 515, 839, 899, 1033, 1192
MalI GATC 4 cut(s) 726, 1263, 1605, 1629
MboI GATC 4 cut(s) 724, 1261, 1603, 1627
MboII GAAGA 5 cut(s) 80, 271, 680, 1088, 1319
MfeI CAATTG 1 cut(s) 1838
MflI RGATCY 1 cut(s) 724
MlyI GAGTC 3 cut(s) 176, 1153, 1487
MmeI TCCRAC 3 cut(s) 547, 841, 1112
Mph1103I ATGCAT 2 cut(s) 1542, 1548
MroI TCCGGA 1 cut(s) 295
MseI TTAA 5 cut(s) 333, 813, 1146, 1527, 1617
MslI CAYNNNNRTG 5 cut(s) 210, 375, 693, 1029, 1545
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 3 cut(s) 296, 593, 1701
MspR9I CCNGG 8 cut(s) 291, 447, 625, 720, 918, 960, 1701, 1702
MunI CAATTG 1 cut(s) 1838
MvaI CCWGG 6 cut(s) 291, 447, 625, 720, 918, 960
MvnI CGCG 1 cut(s) 1803
NciI CCSGG 2 cut(s) 1701, 1702
NdeI CATATG 2 cut(s) 463, 1542
NdeII GATC 4 cut(s) 724, 1261, 1603, 1627
NlaIII CATG 9 cut(s) 65, 112, 380, 509, 542, 1225, 1550, 1801, 1830
NlaIV GGNNCC 5 cut(s) 53, 544, 874, 1504, 1783
NmuCI GTSAC 2 cut(s) 515, 839
NsiI ATGCAT 2 cut(s) 1542, 1548
NspI RCATGY 2 cut(s) 509, 1801
PaeI GCATGC 2 cut(s) 509, 1801
PaeR7I CTCGAG 1 cut(s) 991
PciSI GCTCTTC 1 cut(s) 254
PcsI WCGNNNNNNNCGW 2 cut(s) 1017, 1782
PfeI GAWTC 2 cut(s) 1844, 1862
PflFI GACNNNGTC 1 cut(s) 1025
PfoI TCCNGGA 1 cut(s) 445
PkrI GCNGC 3 cut(s) 979, 1006, 1123
PleI GAGTC 3 cut(s) 176, 1153, 1486
PpsI GAGTC 3 cut(s) 176, 1153, 1486
Ppu21I YACGTR 1 cut(s) 1564
PshBI ATTAAT 1 cut(s) 813
PsiI TTATAA 5 cut(s) 614, 911, 1398, 1473, 1590
Psp1406I AACGTT 1 cut(s) 1191
Psp6I CCWGG 6 cut(s) 289, 445, 623, 718, 916, 958
PspEI GGTNACC 2 cut(s) 839, 899
PspFI CCCAGC 3 cut(s) 43, 1296, 1810
PspGI CCWGG 6 cut(s) 289, 445, 623, 718, 916, 958
PspN4I GGNNCC 5 cut(s) 53, 544, 874, 1504, 1783
PspPI GGNCC 3 cut(s) 293, 413, 1503
PspXI VCTCGAGB 1 cut(s) 991
PsuI RGATCY 1 cut(s) 724
PsyI GACNNNGTC 1 cut(s) 1025
RsaI GTAC 6 cut(s) 422, 629, 755, 1106, 1240, 1443
RsaNI GTAC 6 cut(s) 421, 628, 754, 1105, 1239, 1442
RseI CAYNNNNRTG 5 cut(s) 210, 375, 693, 1029, 1545
SapI GCTCTTC 1 cut(s) 254
SaqAI TTAA 5 cut(s) 333, 813, 1146, 1527, 1617
SatI GCNGC 3 cut(s) 978, 1005, 1122
Sau3AI GATC 4 cut(s) 724, 1261, 1603, 1627
Sau96I GGNCC 3 cut(s) 293, 413, 1503
SchI GAGTC 3 cut(s) 176, 1153, 1487
ScrFI CCNGG 8 cut(s) 291, 447, 625, 720, 918, 960, 1701, 1702
SfaNI GCATC 3 cut(s) 629, 685, 991
SfcI CTRYAG 2 cut(s) 10, 1339
Sfr274I CTCGAG 1 cut(s) 991
SinI GGWCC 3 cut(s) 293, 413, 1503
SlaI CTCGAG 1 cut(s) 991
SmaI CCCGGG 1 cut(s) 1702
SmiMI CAYNNNNRTG 5 cut(s) 210, 375, 693, 1029, 1545
SmlI CTYRAG 2 cut(s) 991, 1635
SmoI CTYRAG 2 cut(s) 991, 1635
SphI GCATGC 2 cut(s) 509, 1801
SsiI CCGC 3 cut(s) 561, 833, 1353
SspI AATATT 3 cut(s) 811, 1394, 1429
SspMI CTAG 7 cut(s) 48, 866, 905, 981, 1046, 1499, 1794
StyD4I CCNGG 8 cut(s) 289, 445, 623, 718, 916, 958, 1699, 1700
StyI CCWWGG 2 cut(s) 346, 401
TaiI ACGT 6 cut(s) 755, 1029, 1194, 1326, 1566, 1649
TaqI TCGA 5 cut(s) 130, 760, 992, 1020, 1072
TaqII GACCGA 1 cut(s) 1520
TatI WGTACW 4 cut(s) 420, 1104, 1238, 1441
TfiI GAWTC 2 cut(s) 1844, 1862
Tru1I TTAA 5 cut(s) 333, 813, 1146, 1527, 1617
Tru9I TTAA 5 cut(s) 333, 813, 1146, 1527, 1617
TscAI CASTG 5 cut(s) 377, 437, 859, 1444, 1762
TseFI GTSAC 2 cut(s) 515, 839
TseI GCWGC 3 cut(s) 977, 1004, 1121
Tsp45I GTSAC 2 cut(s) 515, 839
TspGWI ACGGA 3 cut(s) 782, 789, 1274
TspMI CCCGGG 1 cut(s) 1700
TspRI CASTG 5 cut(s) 377, 437, 859, 1444, 1762
Tth111I GACNNNGTC 1 cut(s) 1025
VpaK11BI GGWCC 3 cut(s) 293, 413, 1503
VspI ATTAAT 1 cut(s) 813
XagI CCTNNNNNAGG 1 cut(s) 1339
XapI RAATTY 3 cut(s) 454, 1130, 1584
XceI RCATGY 2 cut(s) 509, 1801
XcmI CCANNNNNNNNNTGG 2 cut(s) 353, 399
XhoI CTCGAG 1 cut(s) 991
XmaI CCCGGG 1 cut(s) 1700
XspI CTAG 7 cut(s) 48, 866, 905, 981, 1046, 1499, 1794
Zsp2I ATGCAT 2 cut(s) 1542, 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.