Rh6DG274300

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000320
Physical Location & Seq
Reverse (-)
46842213 .. 46844467
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG274300.1

Sequence Viewer

Length: 1641 bp
ATGTTTGTTGTAAACGACATTTTCCCAGGACCGGAGATACGAGTTCATAAAGGGGATATGGTCTATGTAAATGTTTATAATCAAGCATATTATGGTCTCACTATTCACTGGCATGGAATAATGCAACTAAGAAATCCATGGTCAGATGGTCCTGAGTATATCACACAGTGTCCAATCCAACCAGGGACTAATTTCACATACGAGGTCTTGTTATCTACGGAAGAAGGAACCGTATGGTGGCATGCTCATAGTGACTGGACACGAGCTAGCGTTCATGGGGCCATTGTCATCTTGCCTACTGTTGGAAGCACATATCCATTTCCTCAAACCGATGAAGATGAGGTCATTATATTATCATCCTGGTACTTAGGAGATTTGAAAGTACGGGTTGATGAGGCTATGAAAGAAGCCACATCTTTACCCCGTTCTGATGCATACACAATAAATGGGCAGCCGGGGGATCTTTTTCCATGCTCCAAGGGGACAGCATATCGTCTAAAAGTGGATTATGCCAAGACCTATCTTCTTCGTATAGTCAATGCAAACATAGATTCATCCCTTTTCTTTGCAGTTGCTCAACACAACCTCACAGTTGTCGGACTAGACGGAGCCTATATCAAACCCATATACACAACCTACATAGTCATAAGCCCTGGACAAACTATGGATGTTTTGCTCAAAACTGATCAGGTTCTCGGGCGCTATTACATGGCTGGTAGACATTTCTCTAGTGATAATGCCAAAGTTTCTCAATTTGGCCATGATGTTACTGCAATCTTGGAATACAATGGCGACTACACTTATCCAACATCACCTCTCTTTCCCAAAACACTTCCTATGTACTCAGACTTTTCAGCAGCATTAAACTTCACTTACCAAATTAAAAGCTTAGCTTCCCCAGAATATCCAATAAATGTCCCACCAGACAATGACATTACTACCAGAATGTTTATAACAGCTTCCATGAATTCACTTTACTGTGAAGATTCAGGCTTCTTGAGCTGCACAGAGATACCAATCGCTACAAGCGTAAATAACATTAGCTGGGTGAACCCGAGGAATACAGATCTCTTGCAAGCTTATTACAGGAACATAAGTGGGGTTTACTCAACTGATTTTCCAGACCAACCGCCTACTTATTATAACTTTACAGACGAAACTTACTCGAATGATACCGTGTTAACAGTACAAGGAACAAAGGTGAAGGTGTTAAGTTATAATGAGTCAGTTGAGATTGTGTTCCAAGGGACTGATGTACAAGGAGGCTCTGTGAATCATCCACTGCATATGCATGGATATAAGTTTTATGTCGTAGGATATGGTTTCGGAAATTATGACAATGAGACCGACCCAAAAGGGTTTAATCTTGTTGATCCTCCTCATGTCACTACATTTGGAATTCCCAAAAATGGATGGTTGGCGATCAGATTCATAGCGAATAATCCTGGTGTTTGGTTTTGGCACTGTCATATGGAGAGACACCTGACTTTGGGTATGGAAGCTGCATTCATAGTGAAGAATGGGGACACCGCTGAAACTAGCATACTCGAACCCCCAGCTTACATGCCTTCCTGTAATGTTCCATTGGCTTCTCGTTTCAAAAATTCTGATGTGTTTGTTGAAAAGAAAATAGATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

546

Amino Acids

61.46

Weight (kDa)

5.1

Isoelectric Point (pI)

31.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 2 - 99 1.4e-34 Multicopper oxidase
Cu-oxidase PF00394 113 - 264 1.1e-32 Multicopper oxidase
Cu-oxidase_2 PF07731 372 - 508 1.3e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 78, 953, 1143, 1218
AccI GTMKAC 1 cut(s) 718
AciI CCGC 2 cut(s) 1130, 1530
AclWI GGATC 2 cut(s) 468, 1367
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 3 cut(s) 967, 1398, 1603
AdeI CACNNNGTG 1 cut(s) 168
AfaI GTAC 5 cut(s) 365, 384, 842, 1188, 1257
AfiI CCNNNNNNNGG 5 cut(s) 31, 237, 302, 1409, 1489
AgsI TTSAA 3 cut(s) 379, 1600, 1622
AjnI CCWGG 5 cut(s) 25, 181, 359, 652, 1444
AluBI AGCT 9 cut(s) 266, 888, 893, 959, 1002, 1044, 1079, 1502, 1559
AluI AGCT 9 cut(s) 266, 888, 893, 959, 1002, 1044, 1079, 1502, 1559
Alw26I GTCTC 3 cut(s) 101, 1337, 1471
AlwI GGATC 2 cut(s) 468, 1367
Ama87I CYCGRG 2 cut(s) 695, 1054
AoxI GGCC 2 cut(s) 279, 757
ApeKI GCWGC 4 cut(s) 451, 857, 1002, 1502
ApoI RAATTY 3 cut(s) 967, 1398, 1603
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 3 cut(s) 29, 149, 279
AsuC2I CCSGG 1 cut(s) 456
AsuHPI GGTGA 3 cut(s) 804, 1060, 1213
AsuNHI GCTAGC 1 cut(s) 266
AvaI CYCGRG 2 cut(s) 695, 1054
AvaII GGWCC 2 cut(s) 29, 149
BalI TGGCCA 1 cut(s) 759
BauI CACGAG 1 cut(s) 261
BbvI GCAGC 4 cut(s) 463, 869, 989, 1489
BccI CCATC 2 cut(s) 140, 1407
BciT130I CCWGG 5 cut(s) 27, 183, 361, 654, 1446
BclI TGATCA 1 cut(s) 685
BcnI CCSGG 1 cut(s) 456
BcoDI GTCTC 3 cut(s) 101, 1337, 1471
BfaI CTAG 4 cut(s) 267, 602, 729, 1539
BfoI RGCGCY 1 cut(s) 703
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 4 cut(s) 452, 858, 1003, 1503
BlpI GCTNAGC 1 cut(s) 889
BlsI GCNGC 4 cut(s) 453, 859, 1004, 1504
Bme1390I CCNGG 6 cut(s) 27, 183, 361, 456, 654, 1446
Bme18I GGWCC 2 cut(s) 29, 149
BmeT110I CYCGRG 2 cut(s) 695, 1054
BmgT120I GGNCC 3 cut(s) 29, 149, 279
BmiI GGNNCC 3 cut(s) 229, 280, 610
BmrFI CCNGG 6 cut(s) 27, 183, 361, 456, 654, 1446
BmsI GCATC 1 cut(s) 421
BmtI GCTAGC 1 cut(s) 270
Bpu1102I GCTNAGC 1 cut(s) 889
BpuEI CTTGAG 1 cut(s) 1018
BpuMI CCSGG 1 cut(s) 456
BsaBI GATNNNNATC 1 cut(s) 1016
BsaI GGTCTC 2 cut(s) 101, 1337
BsaJI CCNNGG 8 cut(s) 25, 137, 182, 455, 477, 652, 1055, 1243
BsaWI WCCGGW 1 cut(s) 31
BsaXI ACNNNNNCTCC 2 cut(s) 1254, 1284
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 237, 302, 1409, 1489
Bse1I ACTGG 2 cut(s) 113, 260
Bse8I GATNNNNATC 1 cut(s) 1016
BseBI CCWGG 5 cut(s) 27, 183, 361, 654, 1446
BseDI CCNNGG 8 cut(s) 25, 137, 182, 455, 477, 652, 1055, 1243
BseGI GGATG 5 cut(s) 356, 554, 673, 1276, 1418
BseJI GATNNNNATC 1 cut(s) 1016
BseLI CCNNNNNNNGG 5 cut(s) 31, 237, 302, 1409, 1489
BseMII CTCAG 2 cut(s) 144, 858
BseNI ACTGG 2 cut(s) 113, 260
BseRI GAGGAG 1 cut(s) 1368
BseXI GCAGC 4 cut(s) 463, 869, 989, 1489
BseYI CCCAGC 2 cut(s) 1044, 1555
BsgI GTGCAG 1 cut(s) 988
BshFI GGCC 2 cut(s) 281, 759
BsiHKCI CYCGRG 2 cut(s) 695, 1054
BsiSI CCGG 2 cut(s) 32, 455
BslFI GGGAC 5 cut(s) 199, 496, 902, 1261, 1538
BslI CCNNNNNNNGG 5 cut(s) 31, 237, 302, 1409, 1489
BsmAI GTCTC 3 cut(s) 101, 1337, 1471
BsmFI GGGAC 5 cut(s) 199, 496, 902, 1261, 1538
BsmI GAATGC 1 cut(s) 1505
BsnI GGCC 2 cut(s) 281, 759
Bso31I GGTCTC 2 cut(s) 101, 1337
BsoBI CYCGRG 2 cut(s) 695, 1054
Bsp1407I TGTACA 1 cut(s) 1255
Bsp143I GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
Bsp1720I GCTNAGC 1 cut(s) 889
Bsp19I CCATGG 1 cut(s) 137
BspACI CCGC 2 cut(s) 1130, 1530
BspANI GGCC 2 cut(s) 281, 759
BspCNI CTCAG 2 cut(s) 145, 857
BspLI GGNNCC 3 cut(s) 229, 280, 610
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 2 cut(s) 468, 1367
BspTNI GGTCTC 2 cut(s) 101, 1337
BsrGI TGTACA 1 cut(s) 1255
BsrI ACTGG 2 cut(s) 113, 260
BssECI CCNNGG 8 cut(s) 25, 137, 182, 455, 477, 652, 1055, 1243
BssMI GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
BssSI CACGAG 1 cut(s) 261
BssT1I CCWWGG 3 cut(s) 137, 477, 1243
Bst2BI CACGAG 1 cut(s) 261
Bst2UI CCWGG 5 cut(s) 27, 183, 361, 654, 1446
Bst4CI ACNGT 8 cut(s) 168, 232, 301, 592, 980, 1177, 1186, 1466
BstAUI TGTACA 1 cut(s) 1255
BstC8I GCNNGC 3 cut(s) 243, 268, 1077
BstDEI CTNAG 5 cut(s) 128, 153, 367, 844, 889
BstDSI CCRYGG 1 cut(s) 137
BstF5I GGATG 5 cut(s) 356, 554, 673, 1276, 1418
BstH2I RGCGCY 1 cut(s) 703
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 6 cut(s) 463, 688, 1069, 1375, 1425, 1636
BstMAI GTCTC 3 cut(s) 101, 1337, 1471
BstMBI GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
BstMWI GCNNNNNNNGC 1 cut(s) 999
BstNI CCWGG 5 cut(s) 27, 183, 361, 654, 1446
BstNSI RCATGY 2 cut(s) 245, 1567
BstSCI CCNGG 6 cut(s) 25, 181, 359, 454, 652, 1444
BstV1I GCAGC 4 cut(s) 463, 869, 989, 1489
BstX2I RGATCY 2 cut(s) 460, 1066
BstYI RGATCY 2 cut(s) 460, 1066
BsuRI GGCC 2 cut(s) 281, 759
BtgI CCRYGG 1 cut(s) 137
BtsCI GGATG 5 cut(s) 356, 554, 673, 1276, 1418
BtsI GCAGTG 1 cut(s) 1280
BtsIMutI CAGTG 4 cut(s) 106, 173, 1280, 1462
Cac8I GCNNGC 3 cut(s) 243, 268, 1077
CfoI GCGC 1 cut(s) 702
Cfr13I GGNCC 3 cut(s) 29, 149, 279
Csp6I GTAC 5 cut(s) 364, 383, 841, 1187, 1256
CviQI GTAC 5 cut(s) 364, 383, 841, 1187, 1256
DdeI CTNAG 5 cut(s) 128, 153, 367, 844, 889
DpnI GATC 6 cut(s) 462, 687, 1068, 1374, 1424, 1635
DpnII GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
DraIII CACNNNGTG 1 cut(s) 168
EaeI YGGCCR 1 cut(s) 757
Eco130I CCWWGG 3 cut(s) 137, 477, 1243
Eco31I GGTCTC 2 cut(s) 101, 1337
Eco47I GGWCC 2 cut(s) 29, 149
Eco88I CYCGRG 2 cut(s) 695, 1054
EcoRI GAATTC 2 cut(s) 967, 1398
EcoRII CCWGG 5 cut(s) 25, 181, 359, 652, 1444
EcoT14I CCWWGG 3 cut(s) 137, 477, 1243
EcoT22I ATGCAT 2 cut(s) 436, 1293
ErhI CCWWGG 3 cut(s) 137, 477, 1243
FalI AAGNNNNNCTT 2 cut(s) 877, 909
FaqI GGGAC 5 cut(s) 199, 496, 902, 1261, 1538
FauNDI CATATG 2 cut(s) 1287, 1470
FbaI TGATCA 1 cut(s) 685
FblI GTMKAC 1 cut(s) 718
Fnu4HI GCNGC 4 cut(s) 452, 858, 1003, 1503
FokI GGATG 5 cut(s) 343, 541, 680, 1263, 1425
Fsp4HI GCNGC 4 cut(s) 452, 858, 1003, 1503
FspBI CTAG 4 cut(s) 267, 602, 729, 1539
GlaI GCGC 1 cut(s) 701
GluI GCNGC 4 cut(s) 452, 858, 1003, 1503
GsaI CCCAGC 2 cut(s) 1048, 1559
HaeII RGCGCY 1 cut(s) 703
HaeIII GGCC 2 cut(s) 281, 759
HapII CCGG 2 cut(s) 32, 455
HhaI GCGC 1 cut(s) 702
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HincII GTYRAC 1 cut(s) 1182
HindII GTYRAC 1 cut(s) 1182
HindIII AAGCTT 2 cut(s) 886, 1077
HinfI GANTC 5 cut(s) 551, 986, 1223, 1273, 1428
HpaI GTTAAC 1 cut(s) 1182
HpaII CCGG 2 cut(s) 32, 455
HphI GGTGA 3 cut(s) 804, 1060, 1213
Hpy166II GTNNAC 5 cut(s) 13, 719, 1051, 1105, 1182
Hpy188I TCNGA 7 cut(s) 145, 430, 599, 847, 1328, 1427, 1609
Hpy188III TCNNGA 3 cut(s) 152, 997, 1121
Hpy8I GTNNAC 5 cut(s) 13, 719, 1051, 1105, 1182
HpyAV CCTTC 3 cut(s) 218, 1198, 1578
HpyCH4III ACNGT 8 cut(s) 168, 232, 301, 592, 980, 1177, 1186, 1466
HpyF10VI GCNNNNNNNGC 1 cut(s) 999
HpyF3I CTNAG 5 cut(s) 128, 153, 367, 844, 889
HspAI GCGC 1 cut(s) 700
Ksp22I TGATCA 1 cut(s) 685
KspAI GTTAAC 1 cut(s) 1182
Kzo9I GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
LmnI GCTCC 2 cut(s) 479, 608
Lsp1109I GCAGC 4 cut(s) 463, 869, 989, 1489
LweI GCATC 1 cut(s) 421
MaeI CTAG 4 cut(s) 267, 602, 729, 1539
MaeIII GTNAC 3 cut(s) 251, 766, 1384
MalI GATC 6 cut(s) 462, 687, 1068, 1374, 1424, 1635
MboI GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
MboII GAAGA 6 cut(s) 233, 347, 515, 518, 995, 1528
MflI RGATCY 2 cut(s) 460, 1066
MlsI TGGCCA 1 cut(s) 759
MluCI AATT 7 cut(s) 190, 752, 879, 967, 1330, 1398, 1603
MluNI TGGCCA 1 cut(s) 759
MlyI GAGTC 1 cut(s) 1232
MmeI TCCRAC 4 cut(s) 202, 283, 577, 830
Mox20I TGGCCA 1 cut(s) 759
Mph1103I ATGCAT 2 cut(s) 436, 1293
MscI TGGCCA 1 cut(s) 759
MseI TTAA 5 cut(s) 863, 882, 1181, 1211, 1362
MslI CAYNNNNRTG 2 cut(s) 111, 1290
Msp20I TGGCCA 1 cut(s) 759
MspA1I CMGCKG 1 cut(s) 1532
MspI CCGG 2 cut(s) 32, 455
MspR9I CCNGG 6 cut(s) 27, 183, 361, 456, 654, 1446
Mva1269I GAATGC 1 cut(s) 1505
MvaI CCWGG 5 cut(s) 27, 183, 361, 654, 1446
MwoI GCNNNNNNNGC 1 cut(s) 999
NciI CCSGG 1 cut(s) 456
NcoI CCATGG 1 cut(s) 137
NdeI CATATG 2 cut(s) 1287, 1470
NdeII GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
NheI GCTAGC 1 cut(s) 266
NlaIV GGNNCC 3 cut(s) 229, 280, 610
NmuCI GTSAC 2 cut(s) 251, 1384
NsiI ATGCAT 2 cut(s) 436, 1293
NspI RCATGY 2 cut(s) 245, 1567
PaeI GCATGC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 1 cut(s) 1026
PctI GAATGC 1 cut(s) 1505
PfeI GAWTC 4 cut(s) 551, 986, 1273, 1428
PkrI GCNGC 4 cut(s) 453, 859, 1004, 1504
PleI GAGTC 1 cut(s) 1231
PpsI GAGTC 1 cut(s) 1231
PsiI TTATAA 4 cut(s) 78, 953, 1143, 1218
Psp6I CCWGG 5 cut(s) 25, 181, 359, 652, 1444
PspFI CCCAGC 2 cut(s) 1044, 1555
PspGI CCWGG 5 cut(s) 25, 181, 359, 652, 1444
PspN4I GGNNCC 3 cut(s) 229, 280, 610
PspPI GGNCC 3 cut(s) 29, 149, 279
PsuI RGATCY 2 cut(s) 460, 1066
RsaI GTAC 5 cut(s) 365, 384, 842, 1188, 1257
RsaNI GTAC 5 cut(s) 364, 383, 841, 1187, 1256
RseI CAYNNNNRTG 2 cut(s) 111, 1290
SaqAI TTAA 5 cut(s) 863, 882, 1181, 1211, 1362
SatI GCNGC 4 cut(s) 452, 858, 1003, 1503
Sau3AI GATC 6 cut(s) 460, 685, 1066, 1372, 1422, 1633
Sau96I GGNCC 3 cut(s) 29, 149, 279
SchI GAGTC 1 cut(s) 1232
ScrFI CCNGG 6 cut(s) 27, 183, 361, 456, 654, 1446
SfaNI GCATC 1 cut(s) 421
SinI GGWCC 2 cut(s) 29, 149
SmiMI CAYNNNNRTG 2 cut(s) 111, 1290
SmlI CTYRAG 1 cut(s) 997
SmoI CTYRAG 1 cut(s) 997
SphI GCATGC 1 cut(s) 245
Sse9I AATT 7 cut(s) 190, 752, 879, 967, 1330, 1398, 1603
SsiI CCGC 2 cut(s) 1130, 1530
SspMI CTAG 4 cut(s) 267, 602, 729, 1539
StyD4I CCNGG 6 cut(s) 25, 181, 359, 454, 652, 1444
StyI CCWWGG 3 cut(s) 137, 477, 1243
TaaI ACNGT 8 cut(s) 168, 232, 301, 592, 980, 1177, 1186, 1466
TaqI TCGA 2 cut(s) 1166, 1548
TaqII GACCGA 1 cut(s) 1361
TasI AATT 7 cut(s) 190, 752, 879, 967, 1330, 1398, 1603
TatI WGTACW 3 cut(s) 840, 1186, 1255
TfiI GAWTC 4 cut(s) 551, 986, 1273, 1428
Tru1I TTAA 5 cut(s) 863, 882, 1181, 1211, 1362
Tru9I TTAA 5 cut(s) 863, 882, 1181, 1211, 1362
TscAI CASTG 4 cut(s) 113, 173, 1287, 1469
TseFI GTSAC 2 cut(s) 251, 1384
TseI GCWGC 4 cut(s) 451, 857, 1002, 1502
Tsp45I GTSAC 2 cut(s) 251, 1384
TspDTI ATGAA 8 cut(s) 35, 263, 348, 416, 543, 980, 1420, 1498
TspGWI ACGGA 2 cut(s) 233, 621
TspRI CASTG 4 cut(s) 113, 173, 1287, 1469
VpaK11BI GGWCC 2 cut(s) 29, 149
XapI RAATTY 3 cut(s) 967, 1398, 1603
XceI RCATGY 2 cut(s) 245, 1567
XmiI GTMKAC 1 cut(s) 718
XspI CTAG 4 cut(s) 267, 602, 729, 1539
Zsp2I ATGCAT 2 cut(s) 436, 1293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.