FvH4_6g39970

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000320
Physical Location & Seq
Reverse (-)
31557548 .. 31561494
3947 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39970.t1

Sequence Viewer

Length: 1785 bp
ATGGCGACACAGTTTCTGGTGTTCGCTGTTCTTATTGTCATCCTACTGGTGTTCATCTCTCTTGCTCAATGCGAAGTGCATTACCATGATTTTATAGTGAAGGAGGTAAACTTCACAAGATTGTGTGAATCAAAGCTCATGTTAGTAGTAAACGAGAGTTATCCAGGTCCAGCAATACGAGCTCGCAAAGGAGACACTATTTATGTTAATGTCTACAATCAAGGATATTACGGATTCACTATTCACTGGCATGGCGTAAAACAACCAAGAAATCCATGGTTTGATGGCCCAGAATATGTGACACAATGTCCAATCTTACCTGGTACTAATTTTACCTATCAAGTTCAGTTGAGCACAGAAGAAGGAACACTATGGTGGCATGCTCATAGTGATTGGACTAGAGCAAGCGTTCACGGTGCCATTGCTGTATTGCCTGCTCTTGGAACAACATTTCCATTTCCTGAGCCTGATGAAGAGGAGATCATTGTGTTCGGTACTTGGTATTTGGGAAATTTGAAAGAACAGGTTGACAAGTGTTTGGACCCTGCAACAAACTCTGACTTACCCAAAGCATCTGGTTACACTATAAATGGACAACCTGGAGATTTCTCTCCATGCTCTACAAATACAACTTATCGTCGTAAGGTGGACTGTGGCAAGACATATCTTCTTCGGATAGTGAACGCAAACATGGATGAAGAGTTTTACTTCGCCATTGCTGAACACAGCCTCACTGTGGTAGGCTTGGATGGCTCCTATACAAAACCCATCAACACAAACTATATAGTGATAGCCCCCGGACAAACAATGGACGTGTTGCTCAACACAAGTTCGACTTTGGGAAGCTATTACATGGTCGGAAGAGAATACTTAAATTCTAATGTTGACAAGCCAATAGCTGACCATGATGCAATTGCAATCCTTGAATATAATGGCAACTATACCACTTCCGCAGCTCCTTTATTTCCCCAACAGATTCCTAATTCCTTATCCCAAGAACCAGCATTCAACTTTTACGGAAAACTTAGAAGCTTAGCTACACCAGAATATCCTGTAAATGTTCCACAAGAGAGTGACATTACAACCAAAATGTACATAACAGCTTCCTCCAACGCTCTTTACTGTACTCCAGATTTTGATCCTACATGCTTCAACATATCTTTTGCTGCAAGCGTCAATAATATTAGTTGGGCCAATCCGAGTGAATCTATCTTACAAGCTTACTACATGAACATAAGCGAGCCGGTTTATGAAACAGATTTCCCAGACGAGCCGCCTGTTTACTTTAACTTCACTGAAAAAACGACGACCCTAGATCGAGTGTTAACAGTCCAAGGGACAAAGGTCAAGGTACTAGAATATAATGAAACAGTTGAGATGGTTTTTCAAGGCACTGAAGTGATGGGAGGTTCAGCGAATCATCCAATGCACTTGCATGGACATAGCTTTTATGTGCTCGGTTTTGGTTTTGGGAATTACTTCGCCGAGAGGGACTCGAAAACTTTTAATTTGATTGATCCTCCTTATGTATCAACATTCATAACTCCCAAAAAAGGATGGCTAGCTATCAGATTCATAGCGAATAATCCAGGTGTGTGGTTTTGGCATTGTCATATGGAGAGACATATGACATGGGGTATGGAGTCTGCTTTTATGGTGAAGAACGGGGGCACACCTGAGACTAGCATGCTCCCTCCTCCGGCTACAATGCCTTCATGTGAGGTTCCATTGGATTCTGCTACTCTCCCAAGTAACTCGGAATTGATGAAGAATCAAATAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

595

Amino Acids

66.73

Weight (kDa)

4.97

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 33 - 144 2.1e-37 Multicopper oxidase
Cu-oxidase PF00394 160 - 313 1.9e-31 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 555 2.2e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 416
AccI GTMKAC 1 cut(s) 213
AciI CCGC 2 cut(s) 951, 1274
AclWI GGATC 2 cut(s) 1133, 1511
AcsI RAATTY 2 cut(s) 511, 874
AcuI CTGAAG 1 cut(s) 1416
AfaI GTAC 5 cut(s) 325, 496, 1094, 1126, 1353
AfiI CCNNNNNNNGG 4 cut(s) 440, 736, 1553, 1699
AflIII ACRYGT 1 cut(s) 813
AgsI TTSAA 5 cut(s) 517, 926, 1009, 1153, 1388
AhdI GACNNNNNGTC 1 cut(s) 306
AjiI CACGTC 1 cut(s) 814
AjnI CCWGG 4 cut(s) 163, 319, 598, 1588
AleI CACNNNNGTG 2 cut(s) 373, 1397
AloI GAACNNNNNNTCC 2 cut(s) 436, 468
Alw21I GWGCWC 3 cut(s) 184, 356, 1458
Alw26I GTCTC 3 cut(s) 186, 1615, 1673
AlwI GGATC 2 cut(s) 1133, 1511
AlwNI CAGNNNCTG 1 cut(s) 16
AoxI GGCC 2 cut(s) 286, 1191
ApeKI GCWGC 2 cut(s) 953, 1166
ApoI RAATTY 2 cut(s) 511, 874
Asp700I GAANNNNTTC 1 cut(s) 1478
AspS9I GGNCC 4 cut(s) 167, 287, 541, 1191
AsuC2I CCSGG 1 cut(s) 798
AsuHPI GGTGA 1 cut(s) 1669
AsuNHI GCTAGC 1 cut(s) 1561
AvaII GGWCC 2 cut(s) 167, 541
BaeGI GKGCMC 1 cut(s) 1673
BanI GGYRCC 1 cut(s) 416
BanII GRGCYC 1 cut(s) 184
BarI GAAGNNNNNNTAC 2 cut(s) 1021, 1053
Bbv12I GWGCWC 3 cut(s) 184, 356, 1458
BbvI GCAGC 2 cut(s) 965, 1153
BccI CCATC 6 cut(s) 278, 743, 776, 1372, 1396, 1551
BciT130I CCWGG 4 cut(s) 165, 321, 600, 1590
BcnI CCSGG 1 cut(s) 798
BcoDI GTCTC 3 cut(s) 186, 1615, 1673
BfaI CTAG 5 cut(s) 399, 1313, 1355, 1562, 1683
BisI GCNGC 3 cut(s) 954, 1167, 1274
BlpI GCTNAGC 1 cut(s) 1033
BlsI GCNGC 3 cut(s) 955, 1168, 1275
Bme1390I CCNGG 5 cut(s) 165, 321, 600, 798, 1590
Bme18I GGWCC 2 cut(s) 167, 541
BmeRI GACNNNNNGTC 1 cut(s) 306
BmgBI CACGTC 1 cut(s) 814
BmgT120I GGNCC 4 cut(s) 167, 287, 541, 1191
BmiI GGNNCC 4 cut(s) 418, 543, 754, 1725
BmrFI CCNGG 5 cut(s) 165, 321, 600, 798, 1590
BmsI GCATC 2 cut(s) 581, 898
BmtI GCTAGC 1 cut(s) 1565
BoxI GACNNNNGTC 1 cut(s) 1343
BplI GAGNNNNNCTC 2 cut(s) 1478, 1510
BpmI CTGGAG 2 cut(s) 621, 1113
Bpu10I CCTNAGC 1 cut(s) 462
Bpu1102I GCTNAGC 1 cut(s) 1033
BpuMI CCSGG 1 cut(s) 798
BsaBI GATNNNNATC 1 cut(s) 1137
BsaJI CCNNGG 3 cut(s) 275, 796, 1333
Bsc4I CCNNNNNNNGG 4 cut(s) 440, 736, 1553, 1699
Bse118I RCCGGY 1 cut(s) 1243
Bse1I ACTGG 2 cut(s) 51, 251
Bse3DI GCAATG 2 cut(s) 420, 714
Bse8I GATNNNNATC 1 cut(s) 1137
BseBI CCWGG 4 cut(s) 165, 321, 600, 1590
BseDI CCNNGG 3 cut(s) 275, 796, 1333
BseGI GGATG 5 cut(s) 39, 700, 754, 1420, 1562
BseJI GATNNNNATC 1 cut(s) 1137
BseLI CCNNNNNNNGG 4 cut(s) 440, 736, 1553, 1699
BseMI GCAATG 2 cut(s) 420, 714
BseMII CTCAG 2 cut(s) 453, 1668
BseNI ACTGG 2 cut(s) 51, 251
BseRI GAGGAG 2 cut(s) 491, 1686
BseSI GKGCMC 1 cut(s) 1673
BseXI GCAGC 2 cut(s) 965, 1153
BshFI GGCC 2 cut(s) 288, 1193
BshNI GGYRCC 1 cut(s) 416
BsiHKAI GWGCWC 3 cut(s) 184, 356, 1458
BsiSI CCGG 3 cut(s) 798, 1244, 1700
BslFI GGGAC 2 cut(s) 1351, 1505
BslI CCNNNNNNNGG 4 cut(s) 440, 736, 1553, 1699
BsmAI GTCTC 3 cut(s) 186, 1615, 1673
BsmFI GGGAC 2 cut(s) 1351, 1505
BsmI GAATGC 1 cut(s) 1004
BsnI GGCC 2 cut(s) 288, 1193
Bsp1286I GDGCHC 4 cut(s) 184, 356, 1458, 1673
Bsp1407I TGTACA 1 cut(s) 1092
Bsp143I GATC 4 cut(s) 480, 1138, 1315, 1516
Bsp1720I GCTNAGC 1 cut(s) 1033
Bsp19I CCATGG 1 cut(s) 275
BspACI CCGC 2 cut(s) 951, 1274
BspANI GGCC 2 cut(s) 288, 1193
BspCNI CTCAG 2 cut(s) 454, 1669
BspLI GGNNCC 4 cut(s) 418, 543, 754, 1725
BspOI GCTAGC 1 cut(s) 1565
BspPI GGATC 2 cut(s) 1133, 1511
BspT107I GGYRCC 1 cut(s) 416
BsrDI GCAATG 2 cut(s) 420, 714
BsrFI RCCGGY 1 cut(s) 1243
BsrGI TGTACA 1 cut(s) 1092
BsrI ACTGG 2 cut(s) 51, 251
BssAI RCCGGY 1 cut(s) 1243
BssECI CCNNGG 3 cut(s) 275, 796, 1333
BssMI GATC 4 cut(s) 480, 1138, 1315, 1516
BssT1I CCWWGG 2 cut(s) 275, 1333
Bst2UI CCWGG 4 cut(s) 165, 321, 600, 1590
Bst4CI ACNGT 7 cut(s) 12, 416, 653, 736, 1124, 1330, 1372
Bst6I CTCTTC 3 cut(s) 468, 693, 856
BstAUI TGTACA 1 cut(s) 1092
BstC8I GCNNGC 8 cut(s) 184, 381, 406, 435, 1171, 1241, 1563, 1688
BstDEI CTNAG 4 cut(s) 462, 1025, 1033, 1677
BstDSI CCRYGG 1 cut(s) 275
BstF5I GGATG 5 cut(s) 39, 700, 754, 1420, 1562
BstKTI GATC 4 cut(s) 483, 1141, 1318, 1519
BstMAI GTCTC 3 cut(s) 186, 1615, 1673
BstMBI GATC 4 cut(s) 480, 1138, 1315, 1516
BstMWI GCNNNNNNNGC 2 cut(s) 179, 750
BstNI CCWGG 4 cut(s) 165, 321, 600, 1590
BstNSI RCATGY 3 cut(s) 383, 1149, 1690
BstPAI GACNNNNGTC 1 cut(s) 1343
BstSCI CCNGG 5 cut(s) 163, 319, 598, 796, 1588
BstSLI GKGCMC 1 cut(s) 1673
BstV1I GCAGC 2 cut(s) 965, 1153
BstXI CCANNNNNNTGG 1 cut(s) 1596
BsuRI GGCC 2 cut(s) 288, 1193
BtgI CCRYGG 1 cut(s) 275
BtrI CACGTC 1 cut(s) 814
BtsCI GGATG 5 cut(s) 39, 700, 754, 1420, 1562
BtsIMutI CAGTG 4 cut(s) 244, 732, 1293, 1392
Cac8I GCNNGC 8 cut(s) 184, 381, 406, 435, 1171, 1241, 1563, 1688
CaiI CAGNNNCTG 1 cut(s) 16
Cfr10I RCCGGY 1 cut(s) 1243
Cfr13I GGNCC 4 cut(s) 167, 287, 541, 1191
CseI GACGC 1 cut(s) 1162
CsiI ACCWGGT 1 cut(s) 319
Csp6I GTAC 5 cut(s) 324, 495, 1093, 1125, 1352
CviQI GTAC 5 cut(s) 324, 495, 1093, 1125, 1352
DdeI CTNAG 4 cut(s) 462, 1025, 1033, 1677
DpnI GATC 4 cut(s) 482, 1140, 1317, 1518
DpnII GATC 4 cut(s) 480, 1138, 1315, 1516
DriI GACNNNNNGTC 1 cut(s) 306
Eam1104I CTCTTC 3 cut(s) 468, 693, 856
Eam1105I GACNNNNNGTC 1 cut(s) 306
EarI CTCTTC 3 cut(s) 468, 693, 856
Ecl136II GAGCTC 1 cut(s) 182
Eco130I CCWWGG 2 cut(s) 275, 1333
Eco24I GRGCYC 1 cut(s) 184
Eco47I GGWCC 2 cut(s) 167, 541
Eco53kI GAGCTC 1 cut(s) 182
Eco57I CTGAAG 1 cut(s) 1416
EcoICRI GAGCTC 1 cut(s) 182
EcoRII CCWGG 4 cut(s) 163, 319, 598, 1588
EcoT14I CCWWGG 2 cut(s) 275, 1333
EcoT38I GRGCYC 1 cut(s) 184
ErhI CCWWGG 2 cut(s) 275, 1333
FalI AAGNNNNNCTT 2 cut(s) 820, 852
FaqI GGGAC 2 cut(s) 1351, 1505
FauNDI CATATG 2 cut(s) 1614, 1626
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 3 cut(s) 954, 1167, 1274
FokI GGATG 5 cut(s) 26, 707, 761, 1407, 1569
FriOI GRGCYC 1 cut(s) 184
Fsp4HI GCNGC 3 cut(s) 954, 1167, 1274
FspBI CTAG 5 cut(s) 399, 1313, 1355, 1562, 1683
GluI GCNGC 3 cut(s) 954, 1167, 1274
GsuI CTGGAG 2 cut(s) 621, 1113
HaeIII GGCC 2 cut(s) 288, 1193
HapII CCGG 3 cut(s) 798, 1244, 1700
HgaI GACGC 1 cut(s) 1162
HincII GTYRAC 3 cut(s) 529, 886, 1326
HindII GTYRAC 3 cut(s) 529, 886, 1326
HindIII AAGCTT 2 cut(s) 1030, 1218
HpaI GTTAAC 1 cut(s) 1326
HpaII CCGG 3 cut(s) 798, 1244, 1700
HphI GGTGA 1 cut(s) 1669
Hpy188I TCNGA 6 cut(s) 559, 675, 860, 1200, 1571, 1759
Hpy188III TCNNGA 2 cut(s) 461, 1130
Hpy99I CGWCG 2 cut(s) 642, 1309
HpyAV CCTTC 3 cut(s) 94, 356, 1722
HpyCH4III ACNGT 7 cut(s) 12, 416, 653, 736, 1124, 1330, 1372
HpyCH4IV ACGT 1 cut(s) 813
HpyCH4V TGCA 7 cut(s) 79, 548, 911, 917, 1169, 1429, 1435
HpyF10VI GCNNNNNNNGC 2 cut(s) 179, 750
HpyF3I CTNAG 4 cut(s) 462, 1025, 1033, 1677
HpySE526I ACGT 1 cut(s) 813
KspAI GTTAAC 1 cut(s) 1326
Kzo9I GATC 4 cut(s) 480, 1138, 1315, 1516
LmnI GCTCC 3 cut(s) 758, 961, 1695
Lsp1109I GCAGC 2 cut(s) 965, 1153
LweI GCATC 2 cut(s) 581, 898
MabI ACCWGGT 1 cut(s) 319
MaeI CTAG 5 cut(s) 399, 1313, 1355, 1562, 1683
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 4 cut(s) 298, 578, 1073, 1751
MalI GATC 4 cut(s) 482, 1140, 1317, 1518
MboI GATC 4 cut(s) 480, 1138, 1315, 1516
MboII GAAGA 8 cut(s) 371, 485, 659, 662, 710, 873, 1672, 1780
MfeI CAATTG 1 cut(s) 912
MhlI GDGCHC 4 cut(s) 184, 356, 1458, 1673
MluCI AATT 8 cut(s) 328, 511, 874, 912, 982, 1474, 1507, 1760
MlyI GAGTC 2 cut(s) 1487, 1652
MmeI TCCRAC 2 cut(s) 838, 1134
MroXI GAANNNNTTC 1 cut(s) 1478
MseI TTAA 5 cut(s) 207, 872, 1287, 1325, 1506
MslI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1397, 1434
MspI CCGG 3 cut(s) 798, 1244, 1700
MspR9I CCNGG 5 cut(s) 165, 321, 600, 798, 1590
MunI CAATTG 1 cut(s) 912
Mva1269I GAATGC 1 cut(s) 1004
MvaI CCWGG 4 cut(s) 165, 321, 600, 1590
MwoI GCNNNNNNNGC 2 cut(s) 179, 750
NciI CCSGG 1 cut(s) 798
NcoI CCATGG 1 cut(s) 275
NdeI CATATG 2 cut(s) 1614, 1626
NdeII GATC 4 cut(s) 480, 1138, 1315, 1516
NheI GCTAGC 1 cut(s) 1561
NlaIV GGNNCC 4 cut(s) 418, 543, 754, 1725
NmeAIII GCCGAG 1 cut(s) 1510
NmuCI GTSAC 2 cut(s) 298, 1073
NspI RCATGY 3 cut(s) 383, 1149, 1690
OliI CACNNNNGTG 2 cut(s) 373, 1397
PaeI GCATGC 2 cut(s) 383, 1690
PctI GAATGC 1 cut(s) 1004
PdmI GAANNNNTTC 1 cut(s) 1478
PfeI GAWTC 8 cut(s) 128, 234, 976, 1205, 1417, 1572, 1733, 1771
PkrI GCNGC 3 cut(s) 955, 1168, 1275
PleI GAGTC 2 cut(s) 1487, 1651
PpsI GAGTC 2 cut(s) 1487, 1651
PshAI GACNNNNGTC 1 cut(s) 1343
Psp124BI GAGCTC 1 cut(s) 184
Psp6I CCWGG 4 cut(s) 163, 319, 598, 1588
PspGI CCWGG 4 cut(s) 163, 319, 598, 1588
PspN4I GGNNCC 4 cut(s) 418, 543, 754, 1725
PspPI GGNCC 4 cut(s) 167, 287, 541, 1191
PstNI CAGNNNCTG 1 cut(s) 16
RsaI GTAC 5 cut(s) 325, 496, 1094, 1126, 1353
RsaNI GTAC 5 cut(s) 324, 495, 1093, 1125, 1352
RseI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1397, 1434
SacI GAGCTC 1 cut(s) 184
SaqAI TTAA 5 cut(s) 207, 872, 1287, 1325, 1506
SatI GCNGC 3 cut(s) 954, 1167, 1274
Sau3AI GATC 4 cut(s) 480, 1138, 1315, 1516
Sau96I GGNCC 4 cut(s) 167, 287, 541, 1191
SchI GAGTC 2 cut(s) 1487, 1652
ScrFI CCNGG 5 cut(s) 165, 321, 600, 798, 1590
SduI GDGCHC 4 cut(s) 184, 356, 1458, 1673
SexAI ACCWGGT 1 cut(s) 319
SfaNI GCATC 2 cut(s) 581, 898
SinI GGWCC 2 cut(s) 167, 541
SmiMI CAYNNNNRTG 5 cut(s) 84, 249, 373, 1397, 1434
SphI GCATGC 2 cut(s) 383, 1690
Sse9I AATT 8 cut(s) 328, 511, 874, 912, 982, 1474, 1507, 1760
SsiI CCGC 2 cut(s) 951, 1274
SspI AATATT 1 cut(s) 1183
SspMI CTAG 5 cut(s) 399, 1313, 1355, 1562, 1683
SstI GAGCTC 1 cut(s) 184
StyD4I CCNGG 5 cut(s) 163, 319, 598, 796, 1588
StyI CCWWGG 2 cut(s) 275, 1333
TaaI ACNGT 7 cut(s) 12, 416, 653, 736, 1124, 1330, 1372
TaiI ACGT 1 cut(s) 816
TaqI TCGA 3 cut(s) 833, 1318, 1496
TasI AATT 8 cut(s) 328, 511, 874, 912, 982, 1474, 1507, 1760
TatI WGTACW 2 cut(s) 1092, 1124
TauI GCSGC 1 cut(s) 1276
TfiI GAWTC 8 cut(s) 128, 234, 976, 1205, 1417, 1572, 1733, 1771
Tru1I TTAA 5 cut(s) 207, 872, 1287, 1325, 1506
Tru9I TTAA 5 cut(s) 207, 872, 1287, 1325, 1506
TscAI CASTG 4 cut(s) 251, 739, 1300, 1399
TseFI GTSAC 2 cut(s) 298, 1073
TseI GCWGC 2 cut(s) 953, 1166
Tsp45I GTSAC 2 cut(s) 298, 1073
TspGWI ACGGA 2 cut(s) 246, 1032
TspRI CASTG 4 cut(s) 251, 739, 1300, 1399
VpaK11BI GGWCC 2 cut(s) 167, 541
XapI RAATTY 2 cut(s) 511, 874
XceI RCATGY 3 cut(s) 383, 1149, 1690
XcmI CCANNNNNNNNNTGG 1 cut(s) 273
XmiI GTMKAC 1 cut(s) 213
XmnI GAANNNNTTC 1 cut(s) 1478
XspI CTAG 5 cut(s) 399, 1313, 1355, 1562, 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.