FvH4_6g39990

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000320
Physical Location & Seq
Reverse (-)
31584585 .. 31587084
2500 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39990.t1

Sequence Viewer

Length: 1803 bp
ATGAGTATAACTAGTCCAGTTATGTCGACACAGTTTGCGGTGTTCGCTGTTCTTATTATTCTGAAGGTCCTCATCTCTCTGGCTCAAGCCGAAGTGTATTACCACGATTTTATAGTTAAGGAGGTAAACTTCACTAGATTGTGTGAATCAAAGCTCATGTTAGTAGTAAACGAGAGTTATCCAGGTCCTGCAATACGAGCTCGCAAAGGGGATACAATTTATGTTAATGTTTACAATCAAGGGTATTATGGTTTCACCATTCACTGGCATGGAGTGAAACAACCAAGAAATCCATGGTTTGATGGTCCAGAATATGTGACACAATGTCCAATCTTACCGGGGACAAATTTTACCTATCAAGTTCAGTTGAGCACAGAAGAAGGAACACTATGGTGGCATGCTCATAGTGATTGGACTAGAGCAAGCGTTCATGGTGCCATTGTCGTCTTGCCTGCTCTTGGAACAACATTTCCATTTCCTGAGCCTGATGAAGAGGAGATCATTGTGTTTGGATCTTGGTATTTGGGTAATTTGAAAGAACAGGTTGACGAGTGTTTGGAACCTGCAACTAACTCTAACTTACCCATAGCAGCAGGTTACACAGTAAATGGCCGCCTTGGAGATTTCTCTCCATGCTCCAAAAATACAACTTATCGTCGTAAGGTGGACTACGGCAAGACATATCTTCTACGGATAGTGAATGCAAACATCGATGTAGAGTTTTACTTTGCCATTGCTGAACACAACCTCACTGTGGTTGGTTTGGATGGCTCCTATGCCAAACCCATTAACACAGACCTTATAGTGATAGCCCCTGGACAAACAATGGACGTGTTGCTCAACGCAAATTCGACTCAGGGGAGATATTATTACATGGTCGGAAGAGAATACTTAAGTGCTACAGTTGACACAGCATCTGACGATGATGCTATTGCAATCCTTGAATATAATGGCAACTATACCACTTCAGAAGCTCCTTTATTTCCTGAACAGATTCCCGATTCCTTATCCCAAGCACCAGCACTCAACTTCTACAGAAAAATTAGAAGCTTAGCTACCCCAGAATATCCTGTAAATGTTCCAAAAGAGAGTGACGTTACTACCAGAATGTACATAACAGCTTCGGCCAACGCTCTTTACTGTACTGAAGATTTAGGTCCTACATGCTTCAACATATCTTTTGCCGCAAGCGTCAATAATATTAGTTGGGCCAATCCATCAGAATCCATCTTGCAAGCCTACTACAAGAACATAAGCGAGCCGGTTTACGAAACAGATTTCCCAGACGAGCCACCAGTTTATTTCAACTTCACCGAAATAGCCATGACACTAGATCCAGTGTTAACAGTCCAAGGGACAAAGGTGAAGGTGCTAGAGTATAATGAAACAGTTGAGATGGTGTTTCAAGGCACTGAAGTGATGGGAGGTTCTGTAAATCATCCAATGCACTTGCATGGACATAGCTTTTATGTGCTTGGTTTTGGTTATGGGAATTACTTCGCCGAGAGGGACTCAAAAACCTTTAATCTGATTGATCCTCCTTATGTAGCAACATTCATCACTCCAAAAAATGGGTGGTTAGCTATCAGATTCGTAGCGAATAATCCAGGTGTGTGGTTTTGGCATTGTCATATGGAGAGACACTTGACATGGGGTATGGAGTCTGCTTTTATAATCAAGGACGGGGGTACACCTGAGACTAGCATGCTCCCTCCTCCGGCTACAATGCCTTCCTGTGACGTTCCATTGGATTCTGCTACTCTCCCAAGTAACTCGGAATTGAATAAGAATCAAATAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

601

Amino Acids

67.2

Weight (kDa)

4.81

Isoelectric Point (pI)

42.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 39 - 151 7e-38 Multicopper oxidase
Cu-oxidase PF00394 166 - 319 8.7e-32 Multicopper oxidase
Cu-oxidase_2 PF07731 427 - 561 5.8e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1673
Acc36I ACCTGC 2 cut(s) 571, 584
AccB1I GGYRCC 1 cut(s) 434
AccB7I CCANNNNNTGG 2 cut(s) 264, 1571
AccI GTMKAC 1 cut(s) 26
AciI CCGC 3 cut(s) 38, 613, 1185
AclWI GGATC 3 cut(s) 520, 1328, 1529
AcoI YGGCCR 2 cut(s) 610, 1125
AcsI RAATTY 2 cut(s) 346, 847
AcuI CTGAAG 4 cut(s) 83, 951, 1167, 1434
AfaI GTAC 3 cut(s) 1112, 1144, 1690
AfiI CCNNNNNNNGG 5 cut(s) 264, 458, 754, 1571, 1717
AflII CTTAAG 1 cut(s) 892
AflIII ACRYGT 1 cut(s) 831
AgsI TTSAA 6 cut(s) 535, 944, 1171, 1306, 1406, 1783
AhdI GACNNNNNGTC 1 cut(s) 324
AhlI ACTAGT 1 cut(s) 11
AjiI CACGTC 1 cut(s) 832
AjnI CCWGG 3 cut(s) 181, 814, 1606
AleI CACNNNNGTG 2 cut(s) 391, 1415
AloI GAACNNNNNNTCC 2 cut(s) 454, 486
AluBI AGCT 8 cut(s) 154, 200, 974, 1050, 1055, 1121, 1464, 1583
AluI AGCT 8 cut(s) 154, 200, 974, 1050, 1055, 1121, 1464, 1583
Alw21I GWGCWC 2 cut(s) 202, 374
Alw26I GTCTC 2 cut(s) 1633, 1691
AlwI GGATC 3 cut(s) 520, 1328, 1529
AlwNI CAGNNNCTG 2 cut(s) 188, 917
AoxI GGCC 3 cut(s) 610, 1125, 1209
ApeKI GCWGC 1 cut(s) 590
ApoI RAATTY 2 cut(s) 346, 847
Asp700I GAANNNNTTC 2 cut(s) 993, 1496
AspS9I GGNCC 5 cut(s) 67, 185, 305, 1157, 1209
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 3 cut(s) 247, 1303, 1375
AvaII GGWCC 4 cut(s) 67, 185, 305, 1157
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 1 cut(s) 202
BarI GAAGNNNNNNTAC 2 cut(s) 1039, 1071
Bbv12I GWGCWC 2 cut(s) 202, 374
BbvI GCAGC 1 cut(s) 602
BccI CCATC 6 cut(s) 296, 761, 1225, 1235, 1390, 1414
BceAI ACGGC 1 cut(s) 688
BciT130I CCWGG 3 cut(s) 183, 816, 1608
BciVI GTATCC 1 cut(s) 205
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 2 cut(s) 1633, 1691
BcuI ACTAGT 1 cut(s) 11
BfaI CTAG 6 cut(s) 12, 135, 417, 1331, 1373, 1701
BfmI CTRYAG 2 cut(s) 900, 1033
BfrI CTTAAG 1 cut(s) 892
BfuAI ACCTGC 2 cut(s) 571, 584
BfuI GTATCC 1 cut(s) 205
BisI GCNGC 3 cut(s) 591, 613, 1185
BlpI GCTNAGC 1 cut(s) 1051
BlsI GCNGC 3 cut(s) 592, 614, 1186
Bme1390I CCNGG 4 cut(s) 183, 339, 816, 1608
Bme18I GGWCC 4 cut(s) 67, 185, 305, 1157
BmeRI GACNNNNNGTC 1 cut(s) 324
BmgBI CACGTC 1 cut(s) 832
BmgT120I GGNCC 5 cut(s) 67, 185, 305, 1157, 1209
BmiI GGNNCC 3 cut(s) 436, 561, 772
BmrFI CCNGG 4 cut(s) 183, 339, 816, 1608
BmsI GCATC 2 cut(s) 916, 923
BplI GAGNNNNNCTC 2 cut(s) 1496, 1528
Bpu10I CCTNAGC 1 cut(s) 480
Bpu1102I GCTNAGC 1 cut(s) 1051
BpuEI CTTGAG 1 cut(s) 69
BpuMI CCSGG 1 cut(s) 339
Bsa29I ATCGAT 1 cut(s) 711
BsaJI CCNNGG 5 cut(s) 293, 338, 616, 814, 1351
BsaXI ACNNNNNCTCC 2 cut(s) 1416, 1446
Bsc4I CCNNNNNNNGG 5 cut(s) 264, 458, 754, 1571, 1717
Bse118I RCCGGY 1 cut(s) 1261
Bse1I ACTGG 4 cut(s) 17, 269, 1295, 1337
Bse3DI GCAATG 1 cut(s) 732
BseBI CCWGG 3 cut(s) 183, 816, 1608
BseCI ATCGAT 1 cut(s) 711
BseDI CCNNGG 5 cut(s) 293, 338, 616, 814, 1351
BseGI GGATG 2 cut(s) 772, 1438
BseLI CCNNNNNNNGG 5 cut(s) 264, 458, 754, 1571, 1717
BseMI GCAATG 1 cut(s) 732
BseMII CTCAG 3 cut(s) 471, 869, 1686
BseNI ACTGG 4 cut(s) 17, 269, 1295, 1337
BseRI GAGGAG 2 cut(s) 509, 1704
BseXI GCAGC 1 cut(s) 602
BshFI GGCC 3 cut(s) 612, 1127, 1211
BshNI GGYRCC 1 cut(s) 434
BshVI ATCGAT 1 cut(s) 711
BsiHKAI GWGCWC 2 cut(s) 202, 374
BsiSI CCGG 3 cut(s) 338, 1262, 1718
BslFI GGGAC 3 cut(s) 355, 1369, 1523
BslI CCNNNNNNNGG 5 cut(s) 264, 458, 754, 1571, 1717
BsmAI GTCTC 2 cut(s) 1633, 1691
BsmFI GGGAC 3 cut(s) 355, 1369, 1523
BsmI GAATGC 1 cut(s) 706
BsnI GGCC 3 cut(s) 612, 1127, 1211
Bsp1286I GDGCHC 2 cut(s) 202, 374
Bsp1407I TGTACA 1 cut(s) 1110
Bsp143I GATC 4 cut(s) 498, 512, 1333, 1534
Bsp1720I GCTNAGC 1 cut(s) 1051
Bsp19I CCATGG 1 cut(s) 293
BspACI CCGC 3 cut(s) 38, 613, 1185
BspANI GGCC 3 cut(s) 612, 1127, 1211
BspCNI CTCAG 3 cut(s) 472, 868, 1687
BspDI ATCGAT 1 cut(s) 711
BspLI GGNNCC 3 cut(s) 436, 561, 772
BspMI ACCTGC 2 cut(s) 571, 584
BspPI GGATC 3 cut(s) 520, 1328, 1529
BspT107I GGYRCC 1 cut(s) 434
BspTI CTTAAG 1 cut(s) 892
BsrDI GCAATG 1 cut(s) 732
BsrFI RCCGGY 1 cut(s) 1261
BsrGI TGTACA 1 cut(s) 1110
BsrI ACTGG 4 cut(s) 17, 269, 1295, 1337
BssAI RCCGGY 1 cut(s) 1261
BssECI CCNNGG 5 cut(s) 293, 338, 616, 814, 1351
BssMI GATC 4 cut(s) 498, 512, 1333, 1534
BssT1I CCWWGG 3 cut(s) 293, 616, 1351
Bst2UI CCWGG 3 cut(s) 183, 816, 1608
Bst4CI ACNGT 7 cut(s) 33, 604, 754, 904, 1142, 1348, 1390
Bst6I CTCTTC 2 cut(s) 486, 877
BstAFI CTTAAG 1 cut(s) 892
BstAUI TGTACA 1 cut(s) 1110
BstC8I GCNNGC 8 cut(s) 202, 399, 424, 453, 1189, 1236, 1259, 1706
BstDEI CTNAG 4 cut(s) 480, 855, 1051, 1695
BstDSI CCRYGG 1 cut(s) 293
BstF5I GGATG 2 cut(s) 772, 1438
BstKTI GATC 4 cut(s) 501, 515, 1336, 1537
BstMAI GTCTC 2 cut(s) 1633, 1691
BstMBI GATC 4 cut(s) 498, 512, 1333, 1534
BstMWI GCNNNNNNNGC 2 cut(s) 44, 197
BstNI CCWGG 3 cut(s) 183, 816, 1608
BstNSI RCATGY 3 cut(s) 401, 1167, 1708
BstSCI CCNGG 4 cut(s) 181, 337, 814, 1606
BstSFI CTRYAG 2 cut(s) 900, 1033
BstV1I GCAGC 1 cut(s) 602
BstX2I RGATCY 2 cut(s) 512, 1333
BstXI CCANNNNNNTGG 1 cut(s) 1614
BstYI RGATCY 2 cut(s) 512, 1333
Bsu15I ATCGAT 1 cut(s) 711
BsuI GTATCC 1 cut(s) 205
BsuRI GGCC 3 cut(s) 612, 1127, 1211
BsuTUI ATCGAT 1 cut(s) 711
BtgI CCRYGG 1 cut(s) 293
BtrI CACGTC 1 cut(s) 832
BtsCI GGATG 2 cut(s) 772, 1438
BtsIMutI CAGTG 4 cut(s) 262, 750, 1344, 1410
BveI ACCTGC 2 cut(s) 571, 584
Cac8I GCNNGC 8 cut(s) 202, 399, 424, 453, 1189, 1236, 1259, 1706
CaiI CAGNNNCTG 2 cut(s) 188, 917
Cfr10I RCCGGY 1 cut(s) 1261
Cfr13I GGNCC 5 cut(s) 67, 185, 305, 1157, 1209
ClaI ATCGAT 1 cut(s) 711
CseI GACGC 1 cut(s) 1180
Csp6I GTAC 3 cut(s) 1111, 1143, 1689
CviQI GTAC 3 cut(s) 1111, 1143, 1689
DdeI CTNAG 4 cut(s) 480, 855, 1051, 1695
DpnI GATC 4 cut(s) 500, 514, 1335, 1536
DpnII GATC 4 cut(s) 498, 512, 1333, 1534
DriI GACNNNNNGTC 1 cut(s) 324
EaeI YGGCCR 2 cut(s) 610, 1125
Eam1104I CTCTTC 2 cut(s) 486, 877
Eam1105I GACNNNNNGTC 1 cut(s) 324
EarI CTCTTC 2 cut(s) 486, 877
Ecl136II GAGCTC 1 cut(s) 200
Eco130I CCWWGG 3 cut(s) 293, 616, 1351
Eco24I GRGCYC 1 cut(s) 202
Eco47I GGWCC 4 cut(s) 67, 185, 305, 1157
Eco53kI GAGCTC 1 cut(s) 200
Eco57I CTGAAG 4 cut(s) 83, 951, 1167, 1434
EcoICRI GAGCTC 1 cut(s) 200
EcoO109I RGGNCCY 3 cut(s) 67, 185, 1157
EcoRII CCWGG 3 cut(s) 181, 814, 1606
EcoT14I CCWWGG 3 cut(s) 293, 616, 1351
EcoT38I GRGCYC 1 cut(s) 202
ErhI CCWWGG 3 cut(s) 293, 616, 1351
FaqI GGGAC 3 cut(s) 355, 1369, 1523
FauNDI CATATG 1 cut(s) 1632
FblI GTMKAC 1 cut(s) 26
Fnu4HI GCNGC 3 cut(s) 591, 613, 1185
FokI GGATG 2 cut(s) 779, 1425
FriOI GRGCYC 1 cut(s) 202
Fsp4HI GCNGC 3 cut(s) 591, 613, 1185
FspBI CTAG 6 cut(s) 12, 135, 417, 1331, 1373, 1701
GluI GCNGC 3 cut(s) 591, 613, 1185
HaeIII GGCC 3 cut(s) 612, 1127, 1211
HapII CCGG 3 cut(s) 338, 1262, 1718
HgaI GACGC 1 cut(s) 1180
HincII GTYRAC 4 cut(s) 27, 547, 907, 1344
HindII GTYRAC 4 cut(s) 27, 547, 907, 1344
HindIII AAGCTT 1 cut(s) 1048
HpaI GTTAAC 1 cut(s) 1344
HpaII CCGG 3 cut(s) 338, 1262, 1718
HphI GGTGA 3 cut(s) 247, 1303, 1375
Hpy188I TCNGA 8 cut(s) 63, 881, 919, 970, 1222, 1530, 1589, 1777
Hpy188III TCNNGA 4 cut(s) 308, 479, 986, 998
Hpy99I CGWCG 1 cut(s) 660
HpyAV CCTTC 4 cut(s) 58, 374, 1360, 1740
HpyCH4III ACNGT 7 cut(s) 33, 604, 754, 904, 1142, 1348, 1390
HpyCH4IV ACGT 3 cut(s) 831, 1095, 1740
HpyCH4V TGCA 7 cut(s) 191, 566, 704, 935, 1234, 1447, 1453
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 197
HpyF3I CTNAG 4 cut(s) 480, 855, 1051, 1695
HpySE526I ACGT 3 cut(s) 831, 1095, 1740
KspAI GTTAAC 1 cut(s) 1344
Kzo9I GATC 4 cut(s) 498, 512, 1333, 1534
LmnI GCTCC 4 cut(s) 641, 776, 979, 1713
Lsp1109I GCAGC 1 cut(s) 602
LweI GCATC 2 cut(s) 916, 923
MaeI CTAG 6 cut(s) 12, 135, 417, 1331, 1373, 1701
MaeII ACGT 3 cut(s) 831, 1095, 1740
MaeIII GTNAC 6 cut(s) 316, 596, 1091, 1096, 1736, 1769
MalI GATC 4 cut(s) 500, 514, 1335, 1536
MboI GATC 4 cut(s) 498, 512, 1333, 1534
MboII GAAGA 5 cut(s) 389, 503, 677, 894, 1160
MflI RGATCY 2 cut(s) 512, 1333
MhlI GDGCHC 2 cut(s) 202, 374
MluCI AATT 7 cut(s) 216, 346, 529, 847, 1041, 1492, 1778
MlyI GAGTC 3 cut(s) 847, 1505, 1670
MmeI TCCRAC 1 cut(s) 859
MnlI CCTC 9 cut(s) 80, 115, 487, 758, 1418, 1500, 1548, 1722, 1725
MroXI GAANNNNTTC 2 cut(s) 993, 1496
MseI TTAA 6 cut(s) 117, 225, 789, 893, 1343, 1524
MslI CAYNNNNRTG 4 cut(s) 267, 391, 1415, 1452
MspCI CTTAAG 1 cut(s) 892
MspI CCGG 3 cut(s) 338, 1262, 1718
MspR9I CCNGG 4 cut(s) 183, 339, 816, 1608
Mva1269I GAATGC 1 cut(s) 706
MvaI CCWGG 3 cut(s) 183, 816, 1608
MwoI GCNNNNNNNGC 2 cut(s) 44, 197
NciI CCSGG 1 cut(s) 339
NcoI CCATGG 1 cut(s) 293
NdeI CATATG 1 cut(s) 1632
NdeII GATC 4 cut(s) 498, 512, 1333, 1534
NlaIV GGNNCC 3 cut(s) 436, 561, 772
NmeAIII GCCGAG 1 cut(s) 1528
NmuCI GTSAC 3 cut(s) 316, 1091, 1736
NspI RCATGY 3 cut(s) 401, 1167, 1708
OliI CACNNNNGTG 2 cut(s) 391, 1415
PaeI GCATGC 2 cut(s) 401, 1708
PctI GAATGC 1 cut(s) 706
PdmI GAANNNNTTC 2 cut(s) 993, 1496
PfeI GAWTC 7 cut(s) 146, 994, 1001, 1223, 1590, 1751, 1789
PflMI CCANNNNNTGG 2 cut(s) 264, 1571
PkrI GCNGC 3 cut(s) 592, 614, 1186
PleI GAGTC 3 cut(s) 847, 1505, 1669
PpsI GAGTC 3 cut(s) 847, 1505, 1669
PpuMI RGGWCCY 3 cut(s) 67, 185, 1157
PsiI TTATAA 1 cut(s) 1673
Psp124BI GAGCTC 1 cut(s) 202
Psp5II RGGWCCY 3 cut(s) 67, 185, 1157
Psp6I CCWGG 3 cut(s) 181, 814, 1606
PspGI CCWGG 3 cut(s) 181, 814, 1606
PspN4I GGNNCC 3 cut(s) 436, 561, 772
PspPI GGNCC 5 cut(s) 67, 185, 305, 1157, 1209
PspPPI RGGWCCY 3 cut(s) 67, 185, 1157
PstNI CAGNNNCTG 2 cut(s) 188, 917
PsuI RGATCY 2 cut(s) 512, 1333
RsaI GTAC 3 cut(s) 1112, 1144, 1690
RsaNI GTAC 3 cut(s) 1111, 1143, 1689
RseI CAYNNNNRTG 4 cut(s) 267, 391, 1415, 1452
SacI GAGCTC 1 cut(s) 202
SalI GTCGAC 1 cut(s) 25
SaqAI TTAA 6 cut(s) 117, 225, 789, 893, 1343, 1524
SatI GCNGC 3 cut(s) 591, 613, 1185
Sau3AI GATC 4 cut(s) 498, 512, 1333, 1534
Sau96I GGNCC 5 cut(s) 67, 185, 305, 1157, 1209
SchI GAGTC 3 cut(s) 847, 1505, 1670
ScrFI CCNGG 4 cut(s) 183, 339, 816, 1608
SduI GDGCHC 2 cut(s) 202, 374
SfaNI GCATC 2 cut(s) 916, 923
SfcI CTRYAG 2 cut(s) 900, 1033
SinI GGWCC 4 cut(s) 67, 185, 305, 1157
SmiMI CAYNNNNRTG 4 cut(s) 267, 391, 1415, 1452
SmlI CTYRAG 2 cut(s) 84, 892
SmoI CTYRAG 2 cut(s) 84, 892
SpeI ACTAGT 1 cut(s) 11
SphI GCATGC 2 cut(s) 401, 1708
Sse9I AATT 7 cut(s) 216, 346, 529, 847, 1041, 1492, 1778
SsiI CCGC 3 cut(s) 38, 613, 1185
SspI AATATT 1 cut(s) 1201
SspMI CTAG 6 cut(s) 12, 135, 417, 1331, 1373, 1701
SstI GAGCTC 1 cut(s) 202
StyD4I CCNGG 4 cut(s) 181, 337, 814, 1606
StyI CCWWGG 3 cut(s) 293, 616, 1351
TaaI ACNGT 7 cut(s) 33, 604, 754, 904, 1142, 1348, 1390
TaiI ACGT 3 cut(s) 834, 1098, 1743
TaqI TCGA 3 cut(s) 26, 711, 851
TasI AATT 7 cut(s) 216, 346, 529, 847, 1041, 1492, 1778
TatI WGTACW 2 cut(s) 1110, 1142
TauI GCSGC 2 cut(s) 615, 1187
TfiI GAWTC 7 cut(s) 146, 994, 1001, 1223, 1590, 1751, 1789
Tru1I TTAA 6 cut(s) 117, 225, 789, 893, 1343, 1524
Tru9I TTAA 6 cut(s) 117, 225, 789, 893, 1343, 1524
TscAI CASTG 4 cut(s) 269, 757, 1344, 1417
TseFI GTSAC 3 cut(s) 316, 1091, 1736
TseI GCWGC 1 cut(s) 590
Tsp45I GTSAC 3 cut(s) 316, 1091, 1736
TspDTI ATGAA 4 cut(s) 419, 504, 1398, 1546
TspGWI ACGGA 1 cut(s) 706
TspRI CASTG 4 cut(s) 269, 757, 1344, 1417
Van91I CCANNNNNTGG 2 cut(s) 264, 1571
Vha464I CTTAAG 1 cut(s) 892
VpaK11BI GGWCC 4 cut(s) 67, 185, 305, 1157
XapI RAATTY 2 cut(s) 346, 847
XceI RCATGY 3 cut(s) 401, 1167, 1708
XcmI CCANNNNNNNNNTGG 2 cut(s) 291, 1572
XmiI GTMKAC 1 cut(s) 26
XmnI GAANNNNTTC 2 cut(s) 993, 1496
XspI CTAG 6 cut(s) 12, 135, 417, 1331, 1373, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.