Rmu_sc0000239.1_g000020

Belongs to the multicopper oxidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000239.1
OG0000320
Physical Location & Seq
Reverse (-)
140091 .. 149345
9255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000239.1_g000020.1.cds

Sequence Viewer

Length: 1770 bp
atgaactgtcgattgttgatgacagaagttctggggtttctctatgtttttgtgcagtttgactctctggttcaaggcgaagtgcatttctatgattttgttgtaagggagagaaacttcaccaaactctgtgtaacgaagagcattttagtagtaaatgacagttttccaggtccggagatacgagttcacaaaggagatacagttttcgttaatgttcataaccaaggatattatggtttcactattcactggcatggaataaagcaaccaagaaatccttggtcagatggtccagagtacattacgcagtgtccaatccctcctggaacaaatttcacatatgaaatccacttatccgatgaggaaggaactttatggtggcatgctcatagtgactggacaagagccacagttcatggtgccattgtcatcttgcccgctgttggaacaacatttccattccctcaaccggatgatgatgagaccattataattgcatcctggtactttggagatgtgaaagaacttgtggatgtggctatggaagaaggtagcgacttgccccattcagatgcttacactataaatggtgaaccaggagatctttgcaattgctcaaaagaaacaacgtaccgtcgaatggtggactacggaaagacctatctgctccgtataatcaatgcaaatattaatgcagaacatttctttgcggttggtgaccacaacctcactgtggttggactagatggagcctatataaaacccataaacacaggttacctagttataagccctggacaagcgatggatgtcctccttgaagcaaatcaatcccctggtcaatactatatggctgctagacaatactcgagtgaggatgcagcagtcgtggacttcgaccacgtcaatgttactgcaatcctagaatatagaggcaactatacatatcgacctccttcctttccaaccactcttccaatgtacttggactatccagcagcagtaaaattcactttacgaattaagagcttggcgactccagaataccctataagtgtcccactaaacgttactacttcaatgttcataaccgtttccatgaatgaacttccttgtactcattcaggctgtaaaacggatcagaaaatgacttcaagcttgaataatgttagctgggcgttcccactcaataccacagatgttcttcaagcctactacaggaacataagcggggtttacacgacagattttccagaccagccaactcaatattataacttcacagaggaaacttttgtggaaaatattttgttcactgtacaagggacgaaggtgaaggtgctaaattataacgagtcagttcagattgtgtttcaagggaccgatgtgatgaaaagctctgttaatcatccaatgcatatgcatggatacagtttttacgtggttggctttggctttggaatttataacaatgagagtgatccaaaaggatttaatttggttgatcctcctcaagtaactacgtttggagttcccaaaaatggttggttagcaattagatttacagcaaataatcccggggtatggttttggcattgtcattttgagagacacttgagttggggaatggacactgctttcatagtcaaaaacggtggcaccgttcagactagcatgcgcgaacccccagcttatatgcctccatgtaatgctcaattggattctcatatcaaaaccgattcaacagaaggagtaaaaataatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

589

Amino Acids

66.54

Weight (kDa)

5.22

Isoelectric Point (pI)

35.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 494, 791, 1278, 1353, 1470
AccB1I GGYRCC 2 cut(s) 422, 1661
AccII CGCG 1 cut(s) 1683
AccIII TCCGGA 1 cut(s) 175
AciI CCGC 3 cut(s) 441, 713, 1233
AclI AACGTT 1 cut(s) 1071
AclWI GGATC 3 cut(s) 1149, 1478, 1502
AcsI RAATTY 3 cut(s) 334, 1010, 1464
AfaI GTAC 6 cut(s) 302, 509, 635, 986, 1120, 1323
AfiI CCNNNNNNNGG 7 cut(s) 446, 472, 643, 736, 1221, 1544, 1587
AgsI TTSAA 8 cut(s) 74, 824, 1083, 1158, 1165, 1211, 1379, 1746
AjiI CACGTC 1 cut(s) 907
AjnI CCWGG 6 cut(s) 169, 325, 503, 598, 796, 838
AloI GAACNNNNNNTCC 2 cut(s) 442, 474
AluBI AGCT 5 cut(s) 1032, 1161, 1176, 1401, 1694
AluI AGCT 5 cut(s) 1032, 1161, 1176, 1401, 1694
Alw26I GTCTC 2 cut(s) 479, 1606
AlwI GGATC 3 cut(s) 1149, 1478, 1502
Ama87I CYCGRG 2 cut(s) 871, 1580
Aor13HI TCCGGA 1 cut(s) 175
ApeKI GCWGC 3 cut(s) 857, 884, 1001
ApoI RAATTY 3 cut(s) 334, 1010, 1464
AseI ATTAAT 1 cut(s) 693
AspLEI GCGC 1 cut(s) 1683
AspS9I GGNCC 3 cut(s) 173, 293, 1383
AsuC2I CCSGG 2 cut(s) 1581, 1582
AsuHPI GGTGA 4 cut(s) 112, 605, 731, 1348
AvaI CYCGRG 2 cut(s) 871, 1580
AvaII GGWCC 3 cut(s) 173, 293, 1383
BanI GGYRCC 2 cut(s) 422, 1661
BbvI GCAGC 3 cut(s) 844, 896, 1013
BccI CCATC 3 cut(s) 284, 743, 802
BciT130I CCWGG 6 cut(s) 171, 327, 505, 600, 798, 840
BciVI GTATCC 1 cut(s) 1424
BcnI CCSGG 2 cut(s) 1581, 1582
BcoDI GTCTC 2 cut(s) 479, 1606
BfaI CTAG 5 cut(s) 746, 785, 861, 926, 1674
BfmI CTRYAG 1 cut(s) 1219
BfuI GTATCC 1 cut(s) 1424
BglII AGATCT 1 cut(s) 604
BisI GCNGC 3 cut(s) 858, 885, 1002
BlsI GCNGC 3 cut(s) 859, 886, 1003
Bme1390I CCNGG 8 cut(s) 171, 327, 505, 600, 798, 840, 1581, 1582
Bme18I GGWCC 3 cut(s) 173, 293, 1383
BmeT110I CYCGRG 2 cut(s) 871, 1580
BmgBI CACGTC 1 cut(s) 907
BmgT120I GGNCC 3 cut(s) 173, 293, 1383
BmiI GGNNCC 4 cut(s) 424, 754, 1384, 1663
BmrFI CCNGG 8 cut(s) 171, 327, 505, 600, 798, 840, 1581, 1582
BmsI GCATC 3 cut(s) 509, 565, 871
BpmI CTGGAG 1 cut(s) 1026
BpuEI CTTGAG 2 cut(s) 1500, 1639
BpuMI CCSGG 2 cut(s) 1581, 1582
BsaAI YACGTR 1 cut(s) 1444
BsaI GGTCTC 1 cut(s) 479
BsaJI CCNNGG 6 cut(s) 226, 281, 796, 838, 1580, 1581
BsaWI WCCGGW 2 cut(s) 175, 472
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 7 cut(s) 446, 472, 643, 736, 1221, 1544, 1587
Bse1I ACTGG 2 cut(s) 257, 404
BseAI TCCGGA 1 cut(s) 175
BseBI CCWGG 6 cut(s) 171, 327, 505, 600, 798, 840
BseDI CCNNGG 6 cut(s) 226, 281, 796, 838, 1580, 1581
BseGI GGATG 6 cut(s) 481, 500, 541, 817, 886, 1411
BseLI CCNNNNNNNGG 7 cut(s) 446, 472, 643, 736, 1221, 1544, 1587
BseNI ACTGG 2 cut(s) 257, 404
BseRI GAGGAG 1 cut(s) 1503
BseXI GCAGC 3 cut(s) 844, 896, 1013
BseYI CCCAGC 2 cut(s) 1176, 1690
BsgI GTGCAG 1 cut(s) 74
Bsh1236I CGCG 1 cut(s) 1683
BshNI GGYRCC 2 cut(s) 422, 1661
BsiHKCI CYCGRG 2 cut(s) 871, 1580
BsiSI CCGG 3 cut(s) 176, 473, 1581
BslFI GGGAC 3 cut(s) 1046, 1342, 1396
BslI CCNNNNNNNGG 7 cut(s) 446, 472, 643, 736, 1221, 1544, 1587
BsmAI GTCTC 2 cut(s) 479, 1606
BsmFI GGGAC 3 cut(s) 1046, 1342, 1396
Bso31I GGTCTC 1 cut(s) 479
BsoBI CYCGRG 2 cut(s) 871, 1580
Bsp13I TCCGGA 1 cut(s) 175
Bsp1407I TGTACA 1 cut(s) 1321
Bsp143I GATC 4 cut(s) 604, 1141, 1483, 1507
BspACI CCGC 3 cut(s) 441, 713, 1233
BspEI TCCGGA 1 cut(s) 175
BspFNI CGCG 1 cut(s) 1683
BspLI GGNNCC 4 cut(s) 424, 754, 1384, 1663
BspPI GGATC 3 cut(s) 1149, 1478, 1502
BspQI GCTCTTC 1 cut(s) 134
BspT107I GGYRCC 2 cut(s) 422, 1661
BspTNI GGTCTC 1 cut(s) 479
BsrGI TGTACA 1 cut(s) 1321
BsrI ACTGG 2 cut(s) 257, 404
BssECI CCNNGG 6 cut(s) 226, 281, 796, 838, 1580, 1581
BssMI GATC 4 cut(s) 604, 1141, 1483, 1507
BssT1I CCWWGG 2 cut(s) 226, 281
Bst2UI CCWGG 6 cut(s) 171, 327, 505, 600, 798, 840
Bst6I CTCTTC 2 cut(s) 134, 981
BstAUI TGTACA 1 cut(s) 1321
BstBAI YACGTR 1 cut(s) 1444
BstC8I GCNNGC 3 cut(s) 387, 441, 1679
BstEII GGTNACC 2 cut(s) 719, 779
BstENI CCTNNNNNAGG 1 cut(s) 1219
BstF5I GGATG 6 cut(s) 481, 500, 541, 817, 886, 1411
BstFNI CGCG 1 cut(s) 1683
BstHHI GCGC 1 cut(s) 1683
BstKTI GATC 4 cut(s) 607, 1144, 1486, 1510
BstMAI GTCTC 2 cut(s) 479, 1606
BstMBI GATC 4 cut(s) 604, 1141, 1483, 1507
BstNI CCWGG 6 cut(s) 171, 327, 505, 600, 798, 840
BstNSI RCATGY 2 cut(s) 389, 1681
BstPI GGTNACC 2 cut(s) 719, 779
BstSCI CCNGG 8 cut(s) 169, 325, 503, 598, 796, 838, 1579, 1580
BstSFI CTRYAG 1 cut(s) 1219
BstUI CGCG 1 cut(s) 1683
BstV1I GCAGC 3 cut(s) 844, 896, 1013
BstX2I RGATCY 1 cut(s) 604
BstYI RGATCY 1 cut(s) 604
BsuI GTATCC 1 cut(s) 1424
BtgZI GCGATG 1 cut(s) 821
BtrI CACGTC 1 cut(s) 907
BtsCI GGATG 6 cut(s) 481, 500, 541, 817, 886, 1411
BtsI GCAGTG 2 cut(s) 317, 1635
BtsIMutI CAGTG 5 cut(s) 250, 317, 732, 1317, 1635
Cac8I GCNNGC 3 cut(s) 387, 441, 1679
CfoI GCGC 1 cut(s) 1683
Cfr13I GGNCC 3 cut(s) 173, 293, 1383
Cfr9I CCCGGG 1 cut(s) 1580
Csp6I GTAC 6 cut(s) 301, 508, 634, 985, 1119, 1322
CspCI CAANNNNNGTGG 2 cut(s) 1639, 1674
CviAII CATG 7 cut(s) 257, 386, 419, 1102, 1427, 1678, 1707
CviQI GTAC 6 cut(s) 301, 508, 634, 985, 1119, 1322
DpnI GATC 4 cut(s) 606, 1143, 1485, 1509
DpnII GATC 4 cut(s) 604, 1141, 1483, 1507
Eam1104I CTCTTC 2 cut(s) 134, 981
EarI CTCTTC 2 cut(s) 134, 981
Eco130I CCWWGG 2 cut(s) 226, 281
Eco31I GGTCTC 1 cut(s) 479
Eco47I GGWCC 3 cut(s) 173, 293, 1383
Eco88I CYCGRG 2 cut(s) 871, 1580
Eco91I GGTNACC 2 cut(s) 719, 779
EcoNI CCTNNNNNAGG 1 cut(s) 1219
EcoO65I GGTNACC 2 cut(s) 719, 779
EcoRII CCWGG 6 cut(s) 169, 325, 503, 598, 796, 838
EcoT14I CCWWGG 2 cut(s) 226, 281
EcoT22I ATGCAT 2 cut(s) 1422, 1428
ErhI CCWWGG 2 cut(s) 226, 281
FaeI CATG 7 cut(s) 260, 389, 422, 1105, 1430, 1681, 1710
FalI AAGNNNNNCTT 2 cut(s) 265, 297
FaqI GGGAC 3 cut(s) 1046, 1342, 1396
FatI CATG 7 cut(s) 256, 385, 418, 1101, 1426, 1677, 1706
FauI CCCGC 2 cut(s) 448, 1226
FauNDI CATATG 2 cut(s) 343, 1422
Fnu4HI GCNGC 3 cut(s) 858, 885, 1002
FokI GGATG 6 cut(s) 487, 488, 548, 824, 893, 1398
Fsp4HI GCNGC 3 cut(s) 858, 885, 1002
FspBI CTAG 5 cut(s) 746, 785, 861, 926, 1674
GlaI GCGC 1 cut(s) 1682
GluI GCNGC 3 cut(s) 858, 885, 1002
GsaI CCCAGC 2 cut(s) 1180, 1694
GsuI CTGGAG 1 cut(s) 1026
HapII CCGG 3 cut(s) 176, 473, 1581
HhaI GCGC 1 cut(s) 1683
Hin1II CATG 7 cut(s) 260, 389, 422, 1105, 1430, 1681, 1710
Hin6I GCGC 1 cut(s) 1681
HinP1I GCGC 1 cut(s) 1681
HindIII AAGCTT 1 cut(s) 1159
HinfI GANTC 5 cut(s) 62, 1039, 1358, 1724, 1742
HpaII CCGG 3 cut(s) 176, 473, 1581
HphI GGTGA 4 cut(s) 112, 605, 731, 1348
Hpy166II GTNNAC 6 cut(s) 190, 596, 649, 895, 1240, 1317
Hpy188I TCNGA 7 cut(s) 289, 361, 574, 1146, 1368, 1671, 1769
Hpy188III TCNNGA 4 cut(s) 176, 296, 1043, 1256
Hpy8I GTNNAC 6 cut(s) 190, 596, 649, 895, 1240, 1317
Hpy99I CGWCG 1 cut(s) 642
HpyAV CCTTC 6 cut(s) 362, 545, 969, 1327, 1333, 1745
HpyCH4IV ACGT 5 cut(s) 632, 906, 1071, 1443, 1526
HpySE526I ACGT 5 cut(s) 632, 906, 1071, 1443, 1526
Hsp92II CATG 7 cut(s) 260, 389, 422, 1105, 1430, 1681, 1710
HspAI GCGC 1 cut(s) 1681
Kpn2I TCCGGA 1 cut(s) 175
Kzo9I GATC 4 cut(s) 604, 1141, 1483, 1507
LguI GCTCTTC 1 cut(s) 134
LmnI GCTCC 2 cut(s) 675, 752
Lsp1109I GCAGC 3 cut(s) 844, 896, 1013
LweI GCATC 3 cut(s) 509, 565, 871
MaeI CTAG 5 cut(s) 746, 785, 861, 926, 1674
MaeII ACGT 5 cut(s) 632, 906, 1071, 1443, 1526
MaeIII GTNAC 7 cut(s) 133, 395, 719, 779, 913, 1072, 1519
MalI GATC 4 cut(s) 606, 1143, 1485, 1509
MboI GATC 4 cut(s) 604, 1141, 1483, 1507
MboII GAAGA 4 cut(s) 151, 560, 968, 1199
MfeI CAATTG 2 cut(s) 613, 1718
MflI RGATCY 1 cut(s) 604
MlyI GAGTC 3 cut(s) 56, 1033, 1367
MmeI TCCRAC 3 cut(s) 427, 721, 992
Mph1103I ATGCAT 2 cut(s) 1422, 1428
MroI TCCGGA 1 cut(s) 175
MseI TTAA 5 cut(s) 213, 693, 1026, 1407, 1497
MslI CAYNNNNRTG 5 cut(s) 90, 255, 573, 909, 1425
MspA1I CMGCKG 1 cut(s) 443
MspI CCGG 3 cut(s) 176, 473, 1581
MspR9I CCNGG 8 cut(s) 171, 327, 505, 600, 798, 840, 1581, 1582
MunI CAATTG 2 cut(s) 613, 1718
MvaI CCWGG 6 cut(s) 171, 327, 505, 600, 798, 840
MvnI CGCG 1 cut(s) 1683
NciI CCSGG 2 cut(s) 1581, 1582
NdeI CATATG 2 cut(s) 343, 1422
NdeII GATC 4 cut(s) 604, 1141, 1483, 1507
NlaIII CATG 7 cut(s) 260, 389, 422, 1105, 1430, 1681, 1710
NlaIV GGNNCC 4 cut(s) 424, 754, 1384, 1663
NmuCI GTSAC 2 cut(s) 395, 719
NsiI ATGCAT 2 cut(s) 1422, 1428
NspI RCATGY 2 cut(s) 389, 1681
PaeI GCATGC 2 cut(s) 389, 1681
PaeR7I CTCGAG 1 cut(s) 871
PciSI GCTCTTC 1 cut(s) 134
PcsI WCGNNNNNNNCGW 2 cut(s) 897, 1662
PfeI GAWTC 2 cut(s) 1724, 1742
PflFI GACNNNGTC 1 cut(s) 905
PfoI TCCNGGA 1 cut(s) 325
PkrI GCNGC 3 cut(s) 859, 886, 1003
PleI GAGTC 3 cut(s) 56, 1033, 1366
PpsI GAGTC 3 cut(s) 56, 1033, 1366
Ppu21I YACGTR 1 cut(s) 1444
PshBI ATTAAT 1 cut(s) 693
PsiI TTATAA 5 cut(s) 494, 791, 1278, 1353, 1470
Psp1406I AACGTT 1 cut(s) 1071
Psp6I CCWGG 6 cut(s) 169, 325, 503, 598, 796, 838
PspEI GGTNACC 2 cut(s) 719, 779
PspFI CCCAGC 2 cut(s) 1176, 1690
PspGI CCWGG 6 cut(s) 169, 325, 503, 598, 796, 838
PspN4I GGNNCC 4 cut(s) 424, 754, 1384, 1663
PspPI GGNCC 3 cut(s) 173, 293, 1383
PspXI VCTCGAGB 1 cut(s) 871
PsuI RGATCY 1 cut(s) 604
PsyI GACNNNGTC 1 cut(s) 905
RsaI GTAC 6 cut(s) 302, 509, 635, 986, 1120, 1323
RsaNI GTAC 6 cut(s) 301, 508, 634, 985, 1119, 1322
RseI CAYNNNNRTG 5 cut(s) 90, 255, 573, 909, 1425
SapI GCTCTTC 1 cut(s) 134
SaqAI TTAA 5 cut(s) 213, 693, 1026, 1407, 1497
SatI GCNGC 3 cut(s) 858, 885, 1002
Sau3AI GATC 4 cut(s) 604, 1141, 1483, 1507
Sau96I GGNCC 3 cut(s) 173, 293, 1383
SchI GAGTC 3 cut(s) 56, 1033, 1367
ScrFI CCNGG 8 cut(s) 171, 327, 505, 600, 798, 840, 1581, 1582
SfaNI GCATC 3 cut(s) 509, 565, 871
SfcI CTRYAG 1 cut(s) 1219
Sfr274I CTCGAG 1 cut(s) 871
SinI GGWCC 3 cut(s) 173, 293, 1383
SlaI CTCGAG 1 cut(s) 871
SmaI CCCGGG 1 cut(s) 1582
SmiMI CAYNNNNRTG 5 cut(s) 90, 255, 573, 909, 1425
SmlI CTYRAG 3 cut(s) 871, 1515, 1618
SmoI CTYRAG 3 cut(s) 871, 1515, 1618
SphI GCATGC 2 cut(s) 389, 1681
SsiI CCGC 3 cut(s) 441, 713, 1233
SspI AATATT 3 cut(s) 691, 1274, 1309
SspMI CTAG 5 cut(s) 746, 785, 861, 926, 1674
StyD4I CCNGG 8 cut(s) 169, 325, 503, 598, 796, 838, 1579, 1580
StyI CCWWGG 2 cut(s) 226, 281
TaiI ACGT 5 cut(s) 635, 909, 1074, 1446, 1529
TaqI TCGA 5 cut(s) 10, 640, 872, 900, 952
TaqII GACCGA 1 cut(s) 1400
TatI WGTACW 4 cut(s) 300, 984, 1118, 1321
TfiI GAWTC 2 cut(s) 1724, 1742
Tru1I TTAA 5 cut(s) 213, 693, 1026, 1407, 1497
Tru9I TTAA 5 cut(s) 213, 693, 1026, 1407, 1497
TscAI CASTG 5 cut(s) 257, 317, 739, 1324, 1642
TseFI GTSAC 2 cut(s) 395, 719
TseI GCWGC 3 cut(s) 857, 884, 1001
Tsp45I GTSAC 2 cut(s) 395, 719
TspDTI ATGAA 9 cut(s) 17, 209, 360, 407, 1078, 1118, 1122, 1409, 1633
TspGWI ACGGA 3 cut(s) 662, 669, 1154
TspMI CCCGGG 1 cut(s) 1580
TspRI CASTG 5 cut(s) 257, 317, 739, 1324, 1642
Tth111I GACNNNGTC 1 cut(s) 905
VpaK11BI GGWCC 3 cut(s) 173, 293, 1383
VspI ATTAAT 1 cut(s) 693
XagI CCTNNNNNAGG 1 cut(s) 1219
XapI RAATTY 3 cut(s) 334, 1010, 1464
XceI RCATGY 2 cut(s) 389, 1681
XcmI CCANNNNNNNNNTGG 2 cut(s) 233, 279
XhoI CTCGAG 1 cut(s) 871
XmaI CCCGGG 1 cut(s) 1580
XspI CTAG 5 cut(s) 746, 785, 861, 926, 1674
Zsp2I ATGCAT 2 cut(s) 1422, 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.