RLG00000013626

Belongs to the multicopper oxidase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000320
Physical Location & Seq
Reverse (-)
34279508 .. 34285141
5634 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013626

Sequence Viewer

Length: 1752 bp
ATGACAGAAGTTCTGGGGTTCCTCTTTGTTTTTGTGCAGTTTAACTCTCTGGTTCATGGCGAAGTGCATTTCTATGATTTTGTTGTAAGGGAGAGAAACTTCACCAAACTCTGTGTAACGAAGAGCATTTTAGTAGTAAATGACAGTTTTCCAGGTCCGGAGATACGAGTTCACAAAGGAGATACAGTTTTCGTTAATGTTCATAACCAAGGATATTATGGTTTCACTATTCACTGGCATGGAATAAAGCAACCAAGAAATCCTTGGTCAGATGGTCCAGAGTACATTACGCAGTGTCCAATCCCTCCTGGAACAAATTTCACATATGAAATCCACTTATCCGATGAGGAAGGAACTTTATGGTGGCATGCTCATAGTGACTGGACAAGAGCCACAGTTCATGGTGCCATTGTCATCTTGCCCGCTGTTGGAACAACATTTCCATTCCCTCAACCGGATGATGATGAGACCATTATAATTGCATCCTGGTACTTTGGAGATGTGAAAGAACTTGTGGATGTGGCTATGGAAGAAGGTAGCGACTTGCCCCATTCAGATGCTTATACTATAAATGGTGAACCAGGAGATCTTTGTAATTGCTCTAAAGAAACAACGTACCGTCGAATGGTGGACTACGGAAAGACCTATCTGCTCCGTATAATCAATGCAAATATTAATGCAGAACATTTCTTTGCGGTTGGTGACCACAACCTCACTGTGGTTGGACTAGATGGAGCCTATATAAAACCCATAAACACAGGTTACCTAGTTATAAGCCCTGGACAAGCGATGGATGTCCTCCTTGAAGCAAATCAATCTCCTGGTCAATACTATATGGCTGCTAGACAATACTCGAGTGAGGATGCAGCAGTCGTGGACTTCGACCACGTCAATGTTACTGCAATCCTAGAATATAGAGGCAACTATACATATCAACCTCCTTCCTTTCCAACCACTCTTCCAATGTACTTGGACTATCCAGCAGCAGTAAAATTCACTTTACGAATTAAGAGCTTGGCGACTCCAGAATACCCTATCAGTGTCCCACTAAACGTTACTACGTCAATGTTCATAACCGTTTCCATGAATGAACTTCCTTGTACTCATTCAGGCTGTAAAACGGATCAGAAAATGACTTCAAGCTTGAATAATGTTAGCTGGGCGTTCCCACTCAATACCACAGACGTTCTTCAAGCATACTACAGGAACATAAGCGGGGTTTACACGACAGATTTTCCAGACCAGCCAACTCAATATTATAACTTCACAGAGGAAACTTTTGTGGAAAATATTTTGTTCACTGTACAAGGGACGAAGGTGAAGGTGCTAAATTATAACGAGTCAGTTCAGATTGTGTTTCAAGGGACCGATGTGATGAAAAGCTCTGTTAATCATCCAATGCATATGCATGGATACAGTTTCTACGTGGTTGGATTTGGTTTTGGAATTTATAACAATGAGAGTGATCCAAAAGGATTTAATTTGGTTGATCCTCCTCAAGTAACTACATTTGGAGTTCCCAAAAATGGTTGGTTAGCAATTAGATTTACAGCAAATAATCCCGGGGTATGGTTTTGGCATTGTCATTTTGAGAGACACTTGAGTTGGGGAATGGACACTGCTTTCATAGTCAAAAACGGTGGCACTGTTCAGACTAGCATGCGCGAACCCCCAGCTTATATGCCTCCATGTAATGCTCAATTGGATTCTCATATCAAAACCGATTCAACAGAAGGAGTAAATATAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

584

Amino Acids

65.76

Weight (kDa)

5.16

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 29 - 141 2.1e-40 Multicopper oxidase
Cu-oxidase PF00394 156 - 308 1.3e-37 Multicopper oxidase
Cu-oxidase_2 PF07731 414 - 546 3.6e-38 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 476, 773, 1260, 1335, 1452
AccB1I GGYRCC 1 cut(s) 404
AccII CGCG 1 cut(s) 1665
AccIII TCCGGA 1 cut(s) 157
AciI CCGC 3 cut(s) 423, 695, 1215
AclI AACGTT 1 cut(s) 1053
AclWI GGATC 3 cut(s) 1131, 1460, 1484
AcsI RAATTY 3 cut(s) 316, 992, 1446
AfaI GTAC 6 cut(s) 284, 491, 617, 968, 1102, 1305
AfiI CCNNNNNNNGG 6 cut(s) 428, 454, 625, 718, 1526, 1569
AgsI TTSAA 6 cut(s) 806, 1140, 1147, 1193, 1361, 1728
AjiI CACGTC 1 cut(s) 889
AjnI CCWGG 6 cut(s) 151, 307, 485, 580, 778, 820
AloI GAACNNNNNNTCC 2 cut(s) 424, 456
AluBI AGCT 5 cut(s) 1014, 1143, 1158, 1383, 1676
AluI AGCT 5 cut(s) 1014, 1143, 1158, 1383, 1676
Alw26I GTCTC 2 cut(s) 461, 1588
AlwI GGATC 3 cut(s) 1131, 1460, 1484
Ama87I CYCGRG 2 cut(s) 853, 1562
Aor13HI TCCGGA 1 cut(s) 157
ApeKI GCWGC 3 cut(s) 839, 866, 983
ApoI RAATTY 3 cut(s) 316, 992, 1446
AseI ATTAAT 1 cut(s) 675
AspLEI GCGC 1 cut(s) 1665
AspS9I GGNCC 3 cut(s) 155, 275, 1365
AsuC2I CCSGG 2 cut(s) 1563, 1564
AsuHPI GGTGA 4 cut(s) 94, 587, 713, 1330
AvaI CYCGRG 2 cut(s) 853, 1562
AvaII GGWCC 3 cut(s) 155, 275, 1365
BanI GGYRCC 1 cut(s) 404
BbvI GCAGC 3 cut(s) 826, 878, 995
BccI CCATC 3 cut(s) 266, 725, 784
BciT130I CCWGG 6 cut(s) 153, 309, 487, 582, 780, 822
BciVI GTATCC 1 cut(s) 1406
BcnI CCSGG 2 cut(s) 1563, 1564
BcoDI GTCTC 2 cut(s) 461, 1588
BfaI CTAG 5 cut(s) 728, 767, 843, 908, 1656
BfmI CTRYAG 1 cut(s) 1201
BfuI GTATCC 1 cut(s) 1406
BglII AGATCT 1 cut(s) 586
BisI GCNGC 3 cut(s) 840, 867, 984
BlsI GCNGC 3 cut(s) 841, 868, 985
Bme1390I CCNGG 8 cut(s) 153, 309, 487, 582, 780, 822, 1563, 1564
Bme18I GGWCC 3 cut(s) 155, 275, 1365
BmeT110I CYCGRG 2 cut(s) 853, 1562
BmgBI CACGTC 1 cut(s) 889
BmgT120I GGNCC 3 cut(s) 155, 275, 1365
BmiI GGNNCC 4 cut(s) 20, 406, 736, 1366
BmrFI CCNGG 8 cut(s) 153, 309, 487, 582, 780, 822, 1563, 1564
BmsI GCATC 3 cut(s) 491, 547, 853
BpmI CTGGAG 1 cut(s) 1008
BpuEI CTTGAG 2 cut(s) 1482, 1621
BpuMI CCSGG 2 cut(s) 1563, 1564
BsaAI YACGTR 1 cut(s) 1426
BsaI GGTCTC 1 cut(s) 461
BsaJI CCNNGG 5 cut(s) 208, 263, 778, 1562, 1563
BsaWI WCCGGW 2 cut(s) 157, 454
BsaXI ACNNNNNCTCC 2 cut(s) 171, 201
Bsc4I CCNNNNNNNGG 6 cut(s) 428, 454, 625, 718, 1526, 1569
Bse1I ACTGG 2 cut(s) 239, 386
BseAI TCCGGA 1 cut(s) 157
BseBI CCWGG 6 cut(s) 153, 309, 487, 582, 780, 822
BseDI CCNNGG 5 cut(s) 208, 263, 778, 1562, 1563
BseGI GGATG 6 cut(s) 463, 482, 523, 799, 868, 1393
BseLI CCNNNNNNNGG 6 cut(s) 428, 454, 625, 718, 1526, 1569
BseNI ACTGG 2 cut(s) 239, 386
BseRI GAGGAG 1 cut(s) 1485
BseXI GCAGC 3 cut(s) 826, 878, 995
BseYI CCCAGC 2 cut(s) 1158, 1672
BsgI GTGCAG 1 cut(s) 56
Bsh1236I CGCG 1 cut(s) 1665
BshNI GGYRCC 1 cut(s) 404
BsiHKCI CYCGRG 2 cut(s) 853, 1562
BsiSI CCGG 3 cut(s) 158, 455, 1563
BslFI GGGAC 3 cut(s) 1028, 1324, 1378
BslI CCNNNNNNNGG 6 cut(s) 428, 454, 625, 718, 1526, 1569
BsmAI GTCTC 2 cut(s) 461, 1588
BsmFI GGGAC 3 cut(s) 1028, 1324, 1378
Bso31I GGTCTC 1 cut(s) 461
BsoBI CYCGRG 2 cut(s) 853, 1562
Bsp13I TCCGGA 1 cut(s) 157
Bsp1407I TGTACA 1 cut(s) 1303
Bsp143I GATC 4 cut(s) 586, 1123, 1465, 1489
BspACI CCGC 3 cut(s) 423, 695, 1215
BspEI TCCGGA 1 cut(s) 157
BspFNI CGCG 1 cut(s) 1665
BspLI GGNNCC 4 cut(s) 20, 406, 736, 1366
BspPI GGATC 3 cut(s) 1131, 1460, 1484
BspQI GCTCTTC 1 cut(s) 116
BspT107I GGYRCC 1 cut(s) 404
BspTNI GGTCTC 1 cut(s) 461
BsrGI TGTACA 1 cut(s) 1303
BsrI ACTGG 2 cut(s) 239, 386
BssECI CCNNGG 5 cut(s) 208, 263, 778, 1562, 1563
BssMI GATC 4 cut(s) 586, 1123, 1465, 1489
BssT1I CCWWGG 2 cut(s) 208, 263
Bst2UI CCWGG 6 cut(s) 153, 309, 487, 582, 780, 822
Bst6I CTCTTC 2 cut(s) 116, 963
BstAUI TGTACA 1 cut(s) 1303
BstBAI YACGTR 1 cut(s) 1426
BstC8I GCNNGC 3 cut(s) 369, 423, 1661
BstEII GGTNACC 2 cut(s) 701, 761
BstF5I GGATG 6 cut(s) 463, 482, 523, 799, 868, 1393
BstFNI CGCG 1 cut(s) 1665
BstHHI GCGC 1 cut(s) 1665
BstKTI GATC 4 cut(s) 589, 1126, 1468, 1492
BstMAI GTCTC 2 cut(s) 461, 1588
BstMBI GATC 4 cut(s) 586, 1123, 1465, 1489
BstNI CCWGG 6 cut(s) 153, 309, 487, 582, 780, 822
BstNSI RCATGY 2 cut(s) 371, 1663
BstPI GGTNACC 2 cut(s) 701, 761
BstSCI CCNGG 8 cut(s) 151, 307, 485, 580, 778, 820, 1561, 1562
BstSFI CTRYAG 1 cut(s) 1201
BstUI CGCG 1 cut(s) 1665
BstV1I GCAGC 3 cut(s) 826, 878, 995
BstX2I RGATCY 1 cut(s) 586
BstYI RGATCY 1 cut(s) 586
BsuI GTATCC 1 cut(s) 1406
BtgZI GCGATG 1 cut(s) 803
BtrI CACGTC 1 cut(s) 889
BtsCI GGATG 6 cut(s) 463, 482, 523, 799, 868, 1393
BtsI GCAGTG 2 cut(s) 299, 1617
BtsIMutI CAGTG 7 cut(s) 232, 299, 714, 1045, 1299, 1617, 1644
Cac8I GCNNGC 3 cut(s) 369, 423, 1661
CfoI GCGC 1 cut(s) 1665
Cfr13I GGNCC 3 cut(s) 155, 275, 1365
Cfr9I CCCGGG 1 cut(s) 1562
Csp6I GTAC 6 cut(s) 283, 490, 616, 967, 1101, 1304
CspCI CAANNNNNGTGG 2 cut(s) 1621, 1656
CviAII CATG 8 cut(s) 56, 239, 368, 401, 1084, 1409, 1660, 1689
CviQI GTAC 6 cut(s) 283, 490, 616, 967, 1101, 1304
DpnI GATC 4 cut(s) 588, 1125, 1467, 1491
DpnII GATC 4 cut(s) 586, 1123, 1465, 1489
Eam1104I CTCTTC 2 cut(s) 116, 963
EarI CTCTTC 2 cut(s) 116, 963
Eco130I CCWWGG 2 cut(s) 208, 263
Eco31I GGTCTC 1 cut(s) 461
Eco47I GGWCC 3 cut(s) 155, 275, 1365
Eco88I CYCGRG 2 cut(s) 853, 1562
Eco91I GGTNACC 2 cut(s) 701, 761
EcoO65I GGTNACC 2 cut(s) 701, 761
EcoRII CCWGG 6 cut(s) 151, 307, 485, 580, 778, 820
EcoT14I CCWWGG 2 cut(s) 208, 263
EcoT22I ATGCAT 2 cut(s) 1404, 1410
ErhI CCWWGG 2 cut(s) 208, 263
FaeI CATG 8 cut(s) 59, 242, 371, 404, 1087, 1412, 1663, 1692
FalI AAGNNNNNCTT 2 cut(s) 247, 279
FaqI GGGAC 3 cut(s) 1028, 1324, 1378
FatI CATG 8 cut(s) 55, 238, 367, 400, 1083, 1408, 1659, 1688
FauI CCCGC 2 cut(s) 430, 1208
FauNDI CATATG 2 cut(s) 325, 1404
Fnu4HI GCNGC 3 cut(s) 840, 867, 984
FokI GGATG 6 cut(s) 469, 470, 530, 806, 875, 1380
Fsp4HI GCNGC 3 cut(s) 840, 867, 984
FspBI CTAG 5 cut(s) 728, 767, 843, 908, 1656
GlaI GCGC 1 cut(s) 1664
GluI GCNGC 3 cut(s) 840, 867, 984
GsaI CCCAGC 2 cut(s) 1162, 1676
GsuI CTGGAG 1 cut(s) 1008
HapII CCGG 3 cut(s) 158, 455, 1563
HhaI GCGC 1 cut(s) 1665
Hin1II CATG 8 cut(s) 59, 242, 371, 404, 1087, 1412, 1663, 1692
Hin6I GCGC 1 cut(s) 1663
HinP1I GCGC 1 cut(s) 1663
HindIII AAGCTT 1 cut(s) 1141
HinfI GANTC 4 cut(s) 1021, 1340, 1706, 1724
HpaII CCGG 3 cut(s) 158, 455, 1563
HphI GGTGA 4 cut(s) 94, 587, 713, 1330
Hpy166II GTNNAC 6 cut(s) 172, 578, 631, 877, 1222, 1299
Hpy188I TCNGA 7 cut(s) 271, 343, 556, 1128, 1350, 1653, 1751
Hpy188III TCNNGA 4 cut(s) 158, 278, 1025, 1238
Hpy8I GTNNAC 6 cut(s) 172, 578, 631, 877, 1222, 1299
Hpy99I CGWCG 1 cut(s) 624
HpyAV CCTTC 6 cut(s) 344, 527, 951, 1309, 1315, 1727
HpyCH4IV ACGT 6 cut(s) 614, 888, 1053, 1061, 1185, 1425
HpyCH4V TGCA 9 cut(s) 37, 67, 482, 668, 680, 866, 902, 1402, 1408
HpySE526I ACGT 6 cut(s) 614, 888, 1053, 1061, 1185, 1425
Hsp92II CATG 8 cut(s) 59, 242, 371, 404, 1087, 1412, 1663, 1692
HspAI GCGC 1 cut(s) 1663
Kpn2I TCCGGA 1 cut(s) 157
Kzo9I GATC 4 cut(s) 586, 1123, 1465, 1489
LguI GCTCTTC 1 cut(s) 116
LmnI GCTCC 2 cut(s) 657, 734
Lsp1109I GCAGC 3 cut(s) 826, 878, 995
LweI GCATC 3 cut(s) 491, 547, 853
MaeI CTAG 5 cut(s) 728, 767, 843, 908, 1656
MaeII ACGT 6 cut(s) 614, 888, 1053, 1061, 1185, 1425
MaeIII GTNAC 7 cut(s) 115, 377, 701, 761, 895, 1054, 1501
MalI GATC 4 cut(s) 588, 1125, 1467, 1491
MboI GATC 4 cut(s) 586, 1123, 1465, 1489
MboII GAAGA 4 cut(s) 133, 542, 950, 1181
MfeI CAATTG 1 cut(s) 1700
MflI RGATCY 1 cut(s) 586
MlyI GAGTC 2 cut(s) 1015, 1349
MmeI TCCRAC 4 cut(s) 409, 703, 974, 1411
Mph1103I ATGCAT 2 cut(s) 1404, 1410
MroI TCCGGA 1 cut(s) 157
MseI TTAA 6 cut(s) 42, 195, 675, 1008, 1389, 1479
MslI CAYNNNNRTG 5 cut(s) 72, 237, 555, 891, 1407
MspA1I CMGCKG 1 cut(s) 425
MspI CCGG 3 cut(s) 158, 455, 1563
MspR9I CCNGG 8 cut(s) 153, 309, 487, 582, 780, 822, 1563, 1564
MunI CAATTG 1 cut(s) 1700
MvaI CCWGG 6 cut(s) 153, 309, 487, 582, 780, 822
MvnI CGCG 1 cut(s) 1665
NciI CCSGG 2 cut(s) 1563, 1564
NdeI CATATG 2 cut(s) 325, 1404
NdeII GATC 4 cut(s) 586, 1123, 1465, 1489
NlaIII CATG 8 cut(s) 59, 242, 371, 404, 1087, 1412, 1663, 1692
NlaIV GGNNCC 4 cut(s) 20, 406, 736, 1366
NmuCI GTSAC 2 cut(s) 377, 701
NsiI ATGCAT 2 cut(s) 1404, 1410
NspI RCATGY 2 cut(s) 371, 1663
PaeI GCATGC 2 cut(s) 371, 1663
PaeR7I CTCGAG 1 cut(s) 853
PciSI GCTCTTC 1 cut(s) 116
PcsI WCGNNNNNNNCGW 1 cut(s) 879
PfeI GAWTC 2 cut(s) 1706, 1724
PflFI GACNNNGTC 1 cut(s) 887
PfoI TCCNGGA 1 cut(s) 307
PkrI GCNGC 3 cut(s) 841, 868, 985
PleI GAGTC 2 cut(s) 1015, 1348
PpsI GAGTC 2 cut(s) 1015, 1348
Ppu21I YACGTR 1 cut(s) 1426
PshBI ATTAAT 1 cut(s) 675
PsiI TTATAA 5 cut(s) 476, 773, 1260, 1335, 1452
Psp1406I AACGTT 1 cut(s) 1053
Psp6I CCWGG 6 cut(s) 151, 307, 485, 580, 778, 820
PspEI GGTNACC 2 cut(s) 701, 761
PspFI CCCAGC 2 cut(s) 1158, 1672
PspGI CCWGG 6 cut(s) 151, 307, 485, 580, 778, 820
PspN4I GGNNCC 4 cut(s) 20, 406, 736, 1366
PspPI GGNCC 3 cut(s) 155, 275, 1365
PspXI VCTCGAGB 1 cut(s) 853
PsuI RGATCY 1 cut(s) 586
PsyI GACNNNGTC 1 cut(s) 887
RsaI GTAC 6 cut(s) 284, 491, 617, 968, 1102, 1305
RsaNI GTAC 6 cut(s) 283, 490, 616, 967, 1101, 1304
RseI CAYNNNNRTG 5 cut(s) 72, 237, 555, 891, 1407
SapI GCTCTTC 1 cut(s) 116
SaqAI TTAA 6 cut(s) 42, 195, 675, 1008, 1389, 1479
SatI GCNGC 3 cut(s) 840, 867, 984
Sau3AI GATC 4 cut(s) 586, 1123, 1465, 1489
Sau96I GGNCC 3 cut(s) 155, 275, 1365
SchI GAGTC 2 cut(s) 1015, 1349
ScrFI CCNGG 8 cut(s) 153, 309, 487, 582, 780, 822, 1563, 1564
SfaNI GCATC 3 cut(s) 491, 547, 853
SfcI CTRYAG 1 cut(s) 1201
Sfr274I CTCGAG 1 cut(s) 853
SinI GGWCC 3 cut(s) 155, 275, 1365
SlaI CTCGAG 1 cut(s) 853
SmaI CCCGGG 1 cut(s) 1564
SmiMI CAYNNNNRTG 5 cut(s) 72, 237, 555, 891, 1407
SmlI CTYRAG 3 cut(s) 853, 1497, 1600
SmoI CTYRAG 3 cut(s) 853, 1497, 1600
SphI GCATGC 2 cut(s) 371, 1663
SsiI CCGC 3 cut(s) 423, 695, 1215
SspI AATATT 3 cut(s) 673, 1256, 1291
SspMI CTAG 5 cut(s) 728, 767, 843, 908, 1656
StyD4I CCNGG 8 cut(s) 151, 307, 485, 580, 778, 820, 1561, 1562
StyI CCWWGG 2 cut(s) 208, 263
TaiI ACGT 6 cut(s) 617, 891, 1056, 1064, 1188, 1428
TaqI TCGA 3 cut(s) 622, 854, 882
TaqII GACCGA 1 cut(s) 1382
TatI WGTACW 4 cut(s) 282, 966, 1100, 1303
TfiI GAWTC 2 cut(s) 1706, 1724
Tru1I TTAA 6 cut(s) 42, 195, 675, 1008, 1389, 1479
Tru9I TTAA 6 cut(s) 42, 195, 675, 1008, 1389, 1479
TscAI CASTG 7 cut(s) 239, 299, 721, 1045, 1306, 1624, 1651
TseFI GTSAC 2 cut(s) 377, 701
TseI GCWGC 3 cut(s) 839, 866, 983
Tsp45I GTSAC 2 cut(s) 377, 701
TspDTI ATGAA 9 cut(s) 44, 191, 342, 389, 1060, 1100, 1104, 1391, 1615
TspGWI ACGGA 3 cut(s) 644, 651, 1136
TspMI CCCGGG 1 cut(s) 1562
TspRI CASTG 7 cut(s) 239, 299, 721, 1045, 1306, 1624, 1651
Tth111I GACNNNGTC 1 cut(s) 887
VpaK11BI GGWCC 3 cut(s) 155, 275, 1365
VspI ATTAAT 1 cut(s) 675
XapI RAATTY 3 cut(s) 316, 992, 1446
XceI RCATGY 2 cut(s) 371, 1663
XcmI CCANNNNNNNNNTGG 2 cut(s) 215, 261
XhoI CTCGAG 1 cut(s) 853
XmaI CCCGGG 1 cut(s) 1562
XspI CTAG 5 cut(s) 728, 767, 843, 908, 1656
Zsp2I ATGCAT 2 cut(s) 1404, 1410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.