Rh2DG530800

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000320
Physical Location & Seq
Reverse (-)
75939149 .. 75942732
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG530800.1

Sequence Viewer

Length: 1641 bp
ATGTTAGTAGTGAACGAGAGTTTTCCGGGTCCAGAATTACGAGCTCGCAAAGGGGATACAATTTATGTTAATGTTTACAATCAAGGATTTTATGGTTTCACCATTCACTGGCATGGAGTAAAGCAACCAAGAAATCCATGGTTTGATGGCCCGGAATATGTGACACAATGCCCAATTTCACCGGGAACAAATTTTACCTATCAAGTTCAATTGACCACAGAAGAAGGAACTGTATGGTGGCATGCTCATAGTGACTGGACGAGAGCTAGCGTTCACGGTACCATTGTCGTCTTGCCTGCTCTTGGAACAACATTTCCATTTCCTGAGCCCAATGAAGAGGAGAGCATTGTGTTTGGATCTTGGTATTTGGGAAATTTGAAACAAACGATTGACGAGTGTATGGTGCCAGAAAATGCTACCAACTTACCCGAAGCAGATGCTTACACAATAAATGGCCAACCTGGGGATTTTGCTCTATGCTCCAAGAATTCAACATATCGTCTTAAGGTGGACTACGGCAAGACGTATCTTCTTCGGATACTGAACGCCAACATTGATGCAGAGATGTACTTTGCTATTGCTGAGCACAATCTCACTATGGTTGGCATGGACGGTTCCTATACCAAACCCATCAACACAAGCTACATAATGATAAGCCCTGGACAAACAATGGATGTATTGCTCAACACAAATTCGACTGTGGGCAGCTATTACATGGTCGCAAGAGAATACGTGAGTGCTACAGTTAACTCAGTATCTAGCTATCTGGATGATGCTGTTGCAATCCTTGAATATAATGGCAACTATACCACTTCGGAAGCTCCGATATATCCTGAAAACCTTCCCATGTCCTTATCCCAAGAACCAGCATACGACTTCCTCAGGAAAATTAGAAGCTTAGCCACCCCAGAATATCCTATAAATGTCCCAAAAGAGAGTGACGTTACTAAGAGAATGTATATAACAGCTTCCTCCAACGCTCTTTACTGTACTCCAGATTTAGGTCCCACATGCGTCAACATATCTTGGGCTGCAAGCGTCAATAATATTAGTTGGGTTAATCCATCAGAATCTATCTTGCAAGCCTACTACAACAACATAAGCGAACCAGTTTATGAAACAGACTTCCCAGATGAGCCGCCTGTTTATTTTAACTTCACTGATGATTCATCAGCAATAGATGTAGGCTTAACAGTCCAAGGGACAAAGGTGACGATGCTGGAATACAATGAAACAGTTGAGATGGTGTTTCAAGGAACTGATGTGGAGGGAGCGGCCGTGAATCATCCAATGCACGTGCATGGACTTAGCTTTTATGTGCTTGGTTTTGGTTTTGGGAATTACTTCGCCGAGAGGGACTCAAAAACCTTCAATTTGATTGATCCTCCTTATGTAGCAACGTTCATAACTCCAAAAAATGGATGGGTAGCTCTCAGATTCGTAGCGAATAATCCAGGTGTATGGTTTTGGCATTGTCATATGGAGAGACACTTGACATGGGGTATGGAGTCTGCTTTTATAGTGAAGAACGGGGGCACACCTGAGACTACTATGCTCCCTCCTCCGGCTACAATGCCTTCCTGTGACGTTCCATTGAAGTCTTCAGCCATCCTAGAGAAGCAACTAGAACGGACTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00053 ko01100 map00053 map01100
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

546

Amino Acids

61.13

Weight (kDa)

4.68

Isoelectric Point (pI)

42.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 2 - 99 1e-35 Multicopper oxidase
Cu-oxidase PF00394 115 - 268 2.3e-33 Multicopper oxidase
Cu-oxidase_2 PF07731 376 - 510 4.1e-35 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000320)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12640 FvH4_2g18980 FvH4_2g18990 FvH4_2g40270 FvH4_2g40270 FvH4_4g22740 FvH4_4g22740 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g35760 FvH4_5g36460 FvH4_5g36460 FvH4_6g39950 FvH4_6g39970 FvH4_6g39983 FvH4_6g39990
rosa_chinensis RchiOBHm_Chr2g0154481 RchiOBHm_Chr2g0154511 RchiOBHm_Chr4g0428961 RchiOBHm_Chr6g0252431 RchiOBHm_Chr6g0273301 RchiOBHm_Chr6g0273631 RchiOBHm_Chr6g0273651 RchiOBHm_Chr6g0284751 RchiOBHm_Chr6g0284761 RchiOBHm_Chr6g0300491 RchiOBHm_Chr7g0237421 RchiOBHm_Chr7g0238581
rosa_laevigata RLG00000000906 RLG00000001006 RLG00000007110 RLG00000011333 RLG00000012721 RLG00000013605 RLG00000013626 RLG00000020780 RLG00000020782 RLG00000020783 RLG00000020786
rosa_multiflora Rmu_co8321753.1_g000001 Rmu_sc0000239.1_g000020 Rmu_sc0000686.1_g000001 Rmu_sc0000686.1_g000003 Rmu_sc0000686.1_g000005 Rmu_sc0001476.1_g000011 Rmu_sc0002231.1_g000002 Rmu_sc0002231.1_g000016 Rmu_sc0002690.1_g000003 Rmu_sc0002717.1_g000015 Rmu_sc0002923.1_g000026 Rmu_sc0003808.1_g000016 Rmu_sc0006475.1_g000008 Rmu_sc0006475.1_g000012 Rmu_sc0006475.1_g000018 Rmu_sc0014815.1_g000004 Rmu_sc0015313.1_g000012
rosa_roxburghii Rroxscaffold_2G00094270 Rroxscaffold_2G00094290 Rroxscaffold_3G00222950 Rroxscaffold_3G00224250 Rroxscaffold_5G00370630 Rroxscaffold_7G00167740 Rroxscaffold_7G00184410 Rroxscaffold_7G00195190 Rroxscaffold_7G00195460
rosa_rugosa Rorug02G0444600 Rorug04G0231100 Rorug04G0231200 Rorug06G0074000 Rorug06G0076800 Rorug06G0166400 Rorug06G0166500 Rorug06G0166600 Rorug06G0296400 Rorug07G0303000
rosa_samantha Rh2CG494600 Rh2CG494700 Rh2DG530800 Rh2DG530900 Rh2DG531000 Rh4AG287500 Rh4AG403800 Rh4BG293400 Rh4BG415100 Rh4DG290500 Rh6AG191000 Rh6AG191300 Rh6BG192500 Rh6BG194800 Rh6BG195200 Rh6BG279500 Rh6BG279600 Rh6DG183900 Rh6DG186600 Rh6DG274300 Rh6DG274500 Rh6DG409500 Rh7AG460600 Rh7AG468200 Rh7BG430200
rosa_wichuraiana Rw2G041820 Rw2G041830 Rw2G041840 Rw4G024930 Rw6G016470 Rw6G016720 Rw6G016730 Rw6G024020 Rw6G024030 Rw6G035790 Rw7G038130

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 278
AccB1I GGYRCC 2 cut(s) 278, 403
AccB7I CCANNNNNTGG 2 cut(s) 108, 1418
AccBSI CCGCTC 1 cut(s) 1274
AciI CCGC 2 cut(s) 1139, 1274
AclI AACGTT 1 cut(s) 1400
AclWI GGATC 2 cut(s) 364, 1376
AcoI YGGCCR 2 cut(s) 454, 1275
AcsI RAATTY 4 cut(s) 190, 373, 487, 691
AcuI CTGAAG 1 cut(s) 1587
AcvI CACGTG 1 cut(s) 1297
AfaI GTAC 3 cut(s) 280, 569, 991
AfiI CCNNNNNNNGG 6 cut(s) 108, 302, 463, 1001, 1418, 1564
AflII CTTAAG 1 cut(s) 503
AgsI TTSAA 7 cut(s) 209, 379, 492, 791, 1253, 1372, 1597
AjnI CCWGG 3 cut(s) 460, 658, 1453
AloI GAACNNNNNNTCC 2 cut(s) 298, 330
Alw21I GWGCWC 2 cut(s) 46, 588
Alw26I GTCTC 2 cut(s) 1480, 1538
AlwI GGATC 2 cut(s) 364, 1376
AoxI GGCC 3 cut(s) 148, 454, 1275
ApeKI GCWGC 2 cut(s) 705, 1031
ApoI RAATTY 4 cut(s) 190, 373, 487, 691
Asp700I GAANNNNTTC 2 cut(s) 840, 1343
Asp718I GGTACC 1 cut(s) 278
AspS9I GGNCC 3 cut(s) 29, 149, 1004
AsuC2I CCSGG 3 cut(s) 27, 152, 183
AsuHPI GGTGA 3 cut(s) 91, 171, 1222
AsuNHI GCTAGC 1 cut(s) 266
AvaII GGWCC 2 cut(s) 29, 1004
AxyI CCTNAGG 1 cut(s) 881
BaeGI GKGCMC 1 cut(s) 1538
BaeI ACNNNNGTAYC 2 cut(s) 270, 303
BalI TGGCCA 1 cut(s) 456
BanI GGYRCC 2 cut(s) 278, 403
BanII GRGCYC 2 cut(s) 46, 330
BbrPI CACGTG 1 cut(s) 1297
BbsI GAAGAC 1 cut(s) 1593
Bbv12I GWGCWC 2 cut(s) 46, 588
BbvI GCAGC 2 cut(s) 717, 1018
BccI CCATC 6 cut(s) 140, 638, 1072, 1237, 1416, 1616
BceAI ACGGC 2 cut(s) 532, 1262
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 3 cut(s) 462, 660, 1455
BciVI GTATCC 2 cut(s) 49, 531
BcnI CCSGG 3 cut(s) 27, 152, 183
BcoDI GTCTC 2 cut(s) 1480, 1538
BfaI CTAG 4 cut(s) 267, 759, 1613, 1625
BfmI CTRYAG 1 cut(s) 741
BfrI CTTAAG 1 cut(s) 503
BfuI GTATCC 2 cut(s) 49, 531
BisI GCNGC 4 cut(s) 706, 1032, 1139, 1275
BlpI GCTNAGC 2 cut(s) 582, 898
BlsI GCNGC 4 cut(s) 707, 1033, 1140, 1276
Bme1390I CCNGG 6 cut(s) 27, 152, 183, 462, 660, 1455
Bme18I GGWCC 2 cut(s) 29, 1004
BmgT120I GGNCC 3 cut(s) 29, 149, 1004
BmiI GGNNCC 5 cut(s) 30, 280, 405, 616, 1006
BmrFI CCNGG 6 cut(s) 27, 152, 183, 462, 660, 1455
BmsI GCATC 4 cut(s) 427, 547, 763, 1206
BmtI GCTAGC 1 cut(s) 270
BpiI GAAGAC 1 cut(s) 1593
BplI GAGNNNNNCTC 2 cut(s) 1343, 1375
BpmI CTGGAG 1 cut(s) 978
Bpu10I CCTNAGC 1 cut(s) 324
Bpu1102I GCTNAGC 2 cut(s) 582, 898
BpuMI CCSGG 3 cut(s) 27, 152, 183
BsaAI YACGTR 2 cut(s) 733, 1297
BsaJI CCNNGG 4 cut(s) 137, 461, 658, 1198
BsaXI ACNNNNNCTCC 2 cut(s) 1263, 1293
Bsc4I CCNNNNNNNGG 6 cut(s) 108, 302, 463, 1001, 1418, 1564
Bse1I ACTGG 3 cut(s) 113, 260, 1109
Bse21I CCTNAGG 1 cut(s) 881
BseBI CCWGG 3 cut(s) 462, 660, 1455
BseDI CCNNGG 4 cut(s) 137, 461, 658, 1198
BseGI GGATG 5 cut(s) 679, 775, 1285, 1427, 1608
BseLI CCNNNNNNNGG 6 cut(s) 108, 302, 463, 1001, 1418, 1564
BseMII CTCAG 6 cut(s) 315, 573, 765, 895, 1447, 1533
BseNI ACTGG 3 cut(s) 113, 260, 1109
BseRI GAGGAG 2 cut(s) 353, 1551
BseSI GKGCMC 1 cut(s) 1538
BseX3I CGGCCG 1 cut(s) 1275
BseXI GCAGC 2 cut(s) 717, 1018
Bsh1285I CGRYCG 1 cut(s) 1278
BshFI GGCC 3 cut(s) 150, 456, 1277
BshNI GGYRCC 2 cut(s) 278, 403
BsiEI CGRYCG 1 cut(s) 1278
BsiHKAI GWGCWC 2 cut(s) 46, 588
BsiSI CCGG 4 cut(s) 26, 152, 182, 1565
BslFI GGGAC 4 cut(s) 911, 990, 1216, 1370
BslI CCNNNNNNNGG 6 cut(s) 108, 302, 463, 1001, 1418, 1564
BsmAI GTCTC 2 cut(s) 1480, 1538
BsmFI GGGAC 4 cut(s) 911, 990, 1216, 1370
BsnI GGCC 3 cut(s) 150, 456, 1277
Bsp1286I GDGCHC 4 cut(s) 46, 330, 588, 1538
Bsp143I GATC 2 cut(s) 356, 1381
Bsp1720I GCTNAGC 2 cut(s) 582, 898
Bsp19I CCATGG 1 cut(s) 137
BspACI CCGC 2 cut(s) 1139, 1274
BspANI GGCC 3 cut(s) 150, 456, 1277
BspCNI CTCAG 6 cut(s) 316, 574, 764, 894, 1446, 1534
BspLI GGNNCC 5 cut(s) 30, 280, 405, 616, 1006
BspOI GCTAGC 1 cut(s) 270
BspPI GGATC 2 cut(s) 364, 1376
BspT107I GGYRCC 2 cut(s) 278, 403
BspTI CTTAAG 1 cut(s) 503
BsrBI CCGCTC 1 cut(s) 1274
BsrI ACTGG 3 cut(s) 113, 260, 1109
BssECI CCNNGG 4 cut(s) 137, 461, 658, 1198
BssMI GATC 2 cut(s) 356, 1381
BssT1I CCWWGG 2 cut(s) 137, 1198
Bst2UI CCWGG 3 cut(s) 462, 660, 1455
Bst4CI ACNGT 8 cut(s) 232, 278, 614, 700, 745, 989, 1195, 1237
Bst6I CTCTTC 1 cut(s) 330
BstAFI CTTAAG 1 cut(s) 503
BstBAI YACGTR 2 cut(s) 733, 1297
BstC8I GCNNGC 6 cut(s) 46, 243, 268, 297, 1036, 1083
BstDEI CTNAG 9 cut(s) 324, 582, 751, 881, 898, 948, 1307, 1433, 1542
BstDSI CCRYGG 1 cut(s) 137
BstF5I GGATG 5 cut(s) 679, 775, 1285, 1427, 1608
BstKTI GATC 2 cut(s) 359, 1384
BstMAI GTCTC 2 cut(s) 1480, 1538
BstMBI GATC 2 cut(s) 356, 1381
BstMCI CGRYCG 1 cut(s) 1278
BstNI CCWGG 3 cut(s) 462, 660, 1455
BstNSI RCATGY 2 cut(s) 245, 1014
BstSCI CCNGG 6 cut(s) 25, 150, 181, 460, 658, 1453
BstSFI CTRYAG 1 cut(s) 741
BstSLI GKGCMC 1 cut(s) 1538
BstV1I GCAGC 2 cut(s) 717, 1018
BstV2I GAAGAC 1 cut(s) 1593
BstX2I RGATCY 1 cut(s) 356
BstXI CCANNNNNNTGG 1 cut(s) 1461
BstYI RGATCY 1 cut(s) 356
BstZI CGGCCG 1 cut(s) 1275
Bsu36I CCTNAGG 1 cut(s) 881
BsuI GTATCC 2 cut(s) 49, 531
BsuRI GGCC 3 cut(s) 150, 456, 1277
BtgI CCRYGG 1 cut(s) 137
BtsCI GGATG 5 cut(s) 679, 775, 1285, 1427, 1608
BtsIMutI CAGTG 2 cut(s) 106, 1158
Cac8I GCNNGC 6 cut(s) 46, 243, 268, 297, 1036, 1083
Cfr13I GGNCC 3 cut(s) 29, 149, 1004
CseI GACGC 2 cut(s) 1003, 1027
Csp6I GTAC 3 cut(s) 279, 568, 990
CviAII CATG 9 cut(s) 113, 138, 242, 607, 715, 847, 1011, 1301, 1497
CviQI GTAC 3 cut(s) 279, 568, 990
DdeI CTNAG 9 cut(s) 324, 582, 751, 881, 898, 948, 1307, 1433, 1542
DpnI GATC 2 cut(s) 358, 1383
DpnII GATC 2 cut(s) 356, 1381
EaeI YGGCCR 2 cut(s) 454, 1275
EagI CGGCCG 1 cut(s) 1275
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
Ecl136II GAGCTC 1 cut(s) 44
EclXI CGGCCG 1 cut(s) 1275
Eco130I CCWWGG 2 cut(s) 137, 1198
Eco24I GRGCYC 2 cut(s) 46, 330
Eco47I GGWCC 2 cut(s) 29, 1004
Eco52I CGGCCG 1 cut(s) 1275
Eco53kI GAGCTC 1 cut(s) 44
Eco57I CTGAAG 1 cut(s) 1587
Eco72I CACGTG 1 cut(s) 1297
Eco81I CCTNAGG 1 cut(s) 881
EcoICRI GAGCTC 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 1004
EcoRI GAATTC 1 cut(s) 487
EcoRII CCWGG 3 cut(s) 460, 658, 1453
EcoT14I CCWWGG 2 cut(s) 137, 1198
EcoT38I GRGCYC 2 cut(s) 46, 330
ErhI CCWWGG 2 cut(s) 137, 1198
FaeI CATG 9 cut(s) 116, 141, 245, 610, 718, 850, 1014, 1304, 1500
FaqI GGGAC 4 cut(s) 911, 990, 1216, 1370
FatI CATG 9 cut(s) 112, 137, 241, 606, 714, 846, 1010, 1300, 1496
FauNDI CATATG 1 cut(s) 1479
Fnu4HI GCNGC 4 cut(s) 706, 1032, 1139, 1275
FokI GGATG 5 cut(s) 686, 782, 1272, 1434, 1595
FriOI GRGCYC 2 cut(s) 46, 330
Fsp4HI GCNGC 4 cut(s) 706, 1032, 1139, 1275
FspBI CTAG 4 cut(s) 267, 759, 1613, 1625
GluI GCNGC 4 cut(s) 706, 1032, 1139, 1275
GsuI CTGGAG 1 cut(s) 978
HaeIII GGCC 3 cut(s) 150, 456, 1277
HapII CCGG 4 cut(s) 26, 152, 182, 1565
HgaI GACGC 2 cut(s) 1003, 1027
Hin1II CATG 9 cut(s) 116, 141, 245, 610, 718, 850, 1014, 1304, 1500
HincII GTYRAC 2 cut(s) 748, 1018
HindII GTYRAC 2 cut(s) 748, 1018
HindIII AAGCTT 1 cut(s) 895
HinfI GANTC 6 cut(s) 1070, 1166, 1282, 1358, 1437, 1508
HpaI GTTAAC 1 cut(s) 748
HpaII CCGG 4 cut(s) 26, 152, 182, 1565
HphI GGTGA 3 cut(s) 91, 171, 1222
Hpy166II GTNNAC 6 cut(s) 13, 76, 274, 511, 748, 1018
Hpy188I TCNGA 5 cut(s) 537, 817, 825, 1069, 1436
Hpy188III TCNNGA 6 cut(s) 32, 323, 767, 833, 883, 995
Hpy8I GTNNAC 6 cut(s) 13, 76, 274, 511, 748, 1018
HpyAV CCTTC 4 cut(s) 218, 851, 1378, 1587
HpyCH4III ACNGT 8 cut(s) 232, 278, 614, 700, 745, 989, 1195, 1237
HpyCH4IV ACGT 6 cut(s) 524, 732, 942, 1296, 1400, 1587
HpyCH4V TGCA 6 cut(s) 560, 782, 1034, 1081, 1294, 1300
HpyF3I CTNAG 9 cut(s) 324, 582, 751, 881, 898, 948, 1307, 1433, 1542
HpySE526I ACGT 6 cut(s) 524, 732, 942, 1296, 1400, 1587
Hsp92II CATG 9 cut(s) 116, 141, 245, 610, 718, 850, 1014, 1304, 1500
KpnI GGTACC 1 cut(s) 282
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 2 cut(s) 356, 1381
LmnI GCTCC 4 cut(s) 485, 826, 1271, 1560
Lsp1109I GCAGC 2 cut(s) 717, 1018
LweI GCATC 4 cut(s) 427, 547, 763, 1206
MaeI CTAG 4 cut(s) 267, 759, 1613, 1625
MaeII ACGT 6 cut(s) 524, 732, 942, 1296, 1400, 1587
MaeIII GTNAC 6 cut(s) 160, 251, 938, 943, 1210, 1583
MalI GATC 2 cut(s) 358, 1383
MbiI CCGCTC 1 cut(s) 1274
MboI GATC 2 cut(s) 356, 1381
MboII GAAGA 6 cut(s) 233, 347, 521, 524, 1537, 1593
MfeI CAATTG 1 cut(s) 209
MflI RGATCY 1 cut(s) 356
MhlI GDGCHC 4 cut(s) 46, 330, 588, 1538
MlsI TGGCCA 1 cut(s) 456
MluNI TGGCCA 1 cut(s) 456
MlyI GAGTC 2 cut(s) 1352, 1517
MmeI TCCRAC 1 cut(s) 999
MnlI CCTC 8 cut(s) 331, 890, 982, 1261, 1347, 1395, 1569, 1572
Mox20I TGGCCA 1 cut(s) 456
MroXI GAANNNNTTC 2 cut(s) 840, 1343
MscI TGGCCA 1 cut(s) 456
MseI TTAA 7 cut(s) 69, 504, 747, 1059, 1152, 1190, 1639
MslI CAYNNNNRTG 2 cut(s) 111, 1299
Msp20I TGGCCA 1 cut(s) 456
MspCI CTTAAG 1 cut(s) 503
MspI CCGG 4 cut(s) 26, 152, 182, 1565
MspR9I CCNGG 6 cut(s) 27, 152, 183, 462, 660, 1455
MunI CAATTG 1 cut(s) 209
MvaI CCWGG 3 cut(s) 462, 660, 1455
NciI CCSGG 3 cut(s) 27, 152, 183
NcoI CCATGG 1 cut(s) 137
NdeI CATATG 1 cut(s) 1479
NdeII GATC 2 cut(s) 356, 1381
NheI GCTAGC 1 cut(s) 266
NlaIII CATG 9 cut(s) 116, 141, 245, 610, 718, 850, 1014, 1304, 1500
NlaIV GGNNCC 5 cut(s) 30, 280, 405, 616, 1006
NmeAIII GCCGAG 1 cut(s) 1375
NmuCI GTSAC 5 cut(s) 160, 251, 938, 1210, 1583
NspI RCATGY 2 cut(s) 245, 1014
PaeI GCATGC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PdmI GAANNNNTTC 2 cut(s) 840, 1343
PfeI GAWTC 4 cut(s) 1070, 1166, 1282, 1437
PflMI CCANNNNNTGG 2 cut(s) 108, 1418
PkrI GCNGC 4 cut(s) 707, 1033, 1140, 1276
PleI GAGTC 2 cut(s) 1352, 1516
PmaCI CACGTG 1 cut(s) 1297
PmlI CACGTG 1 cut(s) 1297
PpsI GAGTC 2 cut(s) 1352, 1516
Ppu21I YACGTR 2 cut(s) 733, 1297
PpuMI RGGWCCY 1 cut(s) 1004
Psp124BI GAGCTC 1 cut(s) 46
Psp1406I AACGTT 1 cut(s) 1400
Psp5II RGGWCCY 1 cut(s) 1004
Psp6I CCWGG 3 cut(s) 460, 658, 1453
PspCI CACGTG 1 cut(s) 1297
PspGI CCWGG 3 cut(s) 460, 658, 1453
PspN4I GGNNCC 5 cut(s) 30, 280, 405, 616, 1006
PspPI GGNCC 3 cut(s) 29, 149, 1004
PspPPI RGGWCCY 1 cut(s) 1004
PsrI GAACNNNNNNTAC 2 cut(s) 178, 210
PsuI RGATCY 1 cut(s) 356
RsaI GTAC 3 cut(s) 280, 569, 991
RsaNI GTAC 3 cut(s) 279, 568, 990
RseI CAYNNNNRTG 2 cut(s) 111, 1299
SacI GAGCTC 1 cut(s) 46
SaqAI TTAA 7 cut(s) 69, 504, 747, 1059, 1152, 1190, 1639
SatI GCNGC 4 cut(s) 706, 1032, 1139, 1275
Sau3AI GATC 2 cut(s) 356, 1381
Sau96I GGNCC 3 cut(s) 29, 149, 1004
SchI GAGTC 2 cut(s) 1352, 1517
ScrFI CCNGG 6 cut(s) 27, 152, 183, 462, 660, 1455
SduI GDGCHC 4 cut(s) 46, 330, 588, 1538
SfaNI GCATC 4 cut(s) 427, 547, 763, 1206
SfcI CTRYAG 1 cut(s) 741
SinI GGWCC 2 cut(s) 29, 1004
SmiMI CAYNNNNRTG 2 cut(s) 111, 1299
SmlI CTYRAG 1 cut(s) 503
SmoI CTYRAG 1 cut(s) 503
SphI GCATGC 1 cut(s) 245
SsiI CCGC 2 cut(s) 1139, 1274
SspI AATATT 1 cut(s) 1048
SspMI CTAG 4 cut(s) 267, 759, 1613, 1625
SstI GAGCTC 1 cut(s) 46
StyD4I CCNGG 6 cut(s) 25, 150, 181, 460, 658, 1453
StyI CCWWGG 2 cut(s) 137, 1198
TaaI ACNGT 8 cut(s) 232, 278, 614, 700, 745, 989, 1195, 1237
TaiI ACGT 6 cut(s) 527, 735, 945, 1299, 1403, 1590
TaqI TCGA 1 cut(s) 695
TatI WGTACW 2 cut(s) 567, 989
TauI GCSGC 2 cut(s) 1141, 1277
TfiI GAWTC 4 cut(s) 1070, 1166, 1282, 1437
Tru1I TTAA 7 cut(s) 69, 504, 747, 1059, 1152, 1190, 1639
Tru9I TTAA 7 cut(s) 69, 504, 747, 1059, 1152, 1190, 1639
TscAI CASTG 2 cut(s) 113, 1165
TseFI GTSAC 5 cut(s) 160, 251, 938, 1210, 1583
TseI GCWGC 2 cut(s) 705, 1031
Tsp45I GTSAC 5 cut(s) 160, 251, 938, 1210, 1583
TspDTI ATGAA 5 cut(s) 348, 1131, 1158, 1245, 1393
TspRI CASTG 2 cut(s) 113, 1165
Van91I CCANNNNNTGG 2 cut(s) 108, 1418
Vha464I CTTAAG 1 cut(s) 503
VpaK11BI GGWCC 2 cut(s) 29, 1004
XapI RAATTY 4 cut(s) 190, 373, 487, 691
XceI RCATGY 2 cut(s) 245, 1014
XcmI CCANNNNNNNNNTGG 2 cut(s) 135, 1419
XmnI GAANNNNTTC 2 cut(s) 840, 1343
XspI CTAG 4 cut(s) 267, 759, 1613, 1625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.